The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP021402	Bordetella pertussis strain H696 chromosome, complete genome	4103125	143079	217423	4103125	transposase	uncultured_Mediterranean_phage(15.38%)	56	NA	NA
WP_010929591.1|143079_144030_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931563.1|144026_145217_-	voltage-gated potassium channel protein	NA	NA	NA	NA	NA
WP_010931562.1|145338_146103_-	phytanoyl-CoA dioxygenase	NA	NA	NA	NA	NA
WP_003807735.1|146189_147293_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_010931561.1|147484_148501_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815102.1|148782_149271_+	D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase	NA	A0A1B1IUK5	uncultured_Mediterranean_phage	34.1	1.6e-17
WP_003817656.1|150614_151295_-	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	34.8	3.5e-15
WP_010931560.1|151356_152208_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_003817654.1|152204_153080_-	thiazole synthase	NA	NA	NA	NA	NA
WP_010931558.1|153105_153999_-	cobalamin-binding protein	NA	NA	NA	NA	NA
WP_010931557.1|154010_155900_-	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	30.8	7.6e-07
WP_010931556.1|156236_160010_+	methionine synthase	NA	A0A140XBC7	Dickeya_phage	50.8	8.6e-10
WP_010929591.1|160006_160957_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_153302770.1|160943_161111_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929826.1|161265_161958_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	41.6	6.3e-36
WP_003818232.1|162331_162832_-	SET domain-containing protein	NA	NA	NA	NA	NA
WP_023853391.1|162938_163859_+	bestrophin	NA	NA	NA	NA	NA
WP_010929823.1|163875_164352_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929822.1|164445_166296_+	biosynthetic-type acetolactate synthase large subunit	NA	E4WLQ6	Ostreococcus_tauri_virus	30.4	2.2e-59
WP_010929821.1|166351_167110_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003818226.1|167137_168610_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003818225.1|168644_169424_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010929819.1|169436_170270_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003815975.1|170278_171052_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.9	8.1e-24
WP_010929818.1|171048_172113_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929817.1|172264_174892_-	DNA topoisomerase III	NA	A0A0G2YA05	Acanthamoeba_polyphaga_mimivirus	25.4	6.1e-23
WP_010929816.1|174955_177577_+	DUF4401 domain-containing protein	NA	NA	NA	NA	NA
WP_003815964.1|178504_178963_-	DUF494 domain-containing protein	NA	NA	NA	NA	NA
WP_010929815.1|179241_181485_-	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA	NA
WP_010929814.1|181681_183706_-	TRAP transporter permease	NA	NA	NA	NA	NA
WP_010929813.1|183829_184792_-	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010929812.1|185003_186143_+	DSD1 family PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_010929811.1|186165_187131_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_004565905.1|187326_188517_+	acetylornithine transaminase	NA	A0A1V0SKB7	Klosneuvirus	26.7	4.4e-21
WP_003815955.1|188530_188776_+	DUF1653 domain-containing protein	NA	NA	NA	NA	NA
WP_010929810.1|188804_190826_-	acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha	NA	NA	NA	NA	NA
WP_003815953.1|190872_192480_-	methylcrotonoyl-CoA carboxylase	NA	A0A1B2ITV7	Pike_perch_iridovirus	57.3	5.4e-22
WP_010929808.1|192580_193750_-	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_005012067.1|196631_197582_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929807.1|197605_198664_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_003818201.1|198738_199113_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|199667_200618_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995443.1|200604_200745_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929833.1|202174_203020_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929834.1|203107_204271_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
WP_010929835.1|204689_205661_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929836.1|205699_207127_-	amidase	NA	NA	NA	NA	NA
WP_023853625.1|207246_208038_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929838.1|208156_210610_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	34.8	2.3e-112
WP_003816023.1|210704_211820_-	DNA polymerase III subunit beta	NA	B4UTW9	Rhizobium_phage	32.6	1.6e-41
WP_010929554.1|211816_213226_-	chromosomal replication initiator protein DnaA	NA	NA	NA	NA	NA
WP_003816025.1|213631_213766_+	50S ribosomal protein L34	NA	NA	NA	NA	NA
WP_003816026.1|213861_214233_+	ribonuclease P protein component	NA	NA	NA	NA	NA
WP_003816027.1|214229_214502_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	52.2	7.0e-15
WP_010927254.1|214550_216242_+	membrane protein insertase YidC	NA	NA	NA	NA	NA
WP_005012067.1|216472_217423_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NZ_CP021402	Bordetella pertussis strain H696 chromosome, complete genome	4103125	520647	581837	4103125	protease,transposase	uncultured_Mediterranean_phage(40.0%)	56	NA	NA
WP_005013747.1|520647_521598_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446133.1|522073_522964_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_010931496.1|522960_523782_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_019247235.1|523980_524472_+	CYTH domain-containing protein	NA	NA	NA	NA	NA
WP_019247236.1|524490_525564_+	CHAD domain-containing protein	NA	NA	NA	NA	NA
WP_023853086.1|525610_526714_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
WP_003808577.1|526789_527410_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_003808574.1|527430_527940_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	42.1	1.2e-28
WP_003808570.1|527994_528246_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	53.4	1.6e-18
WP_010931494.1|528309_529443_+	benzoate/H(+) symporter BenE family transporter	NA	NA	NA	NA	NA
WP_003808567.1|529450_529837_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931493.1|529833_532353_-	AsmA family protein	NA	NA	NA	NA	NA
WP_003808563.1|532781_533120_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003808562.1|533116_533623_+	SRPBCC family protein	NA	NA	NA	NA	NA
WP_010931492.1|533684_534485_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931491.1|534595_535537_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931490.1|535630_537166_-	M81 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931489.1|538845_540696_-	dipeptide ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.2	1.6e-17
WP_003808549.1|540699_541533_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931488.1|541532_542474_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003808546.1|542725_543721_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931486.1|543838_546127_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003808542.1|546433_547342_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
WP_010931485.1|547396_548362_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931484.1|548436_550098_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
WP_023853074.1|550094_550880_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|551028_551979_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814152.1|552677_553061_+	membrane protein	NA	NA	NA	NA	NA
WP_010927005.1|553118_553721_+	DUF2946 family protein	NA	NA	NA	NA	NA
WP_003820995.1|553738_554140_-	DoxX family protein	NA	NA	NA	NA	NA
WP_003814158.1|554273_555167_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931481.1|555163_555745_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_003814165.1|556539_557274_+	arginyltransferase	NA	NA	NA	NA	NA
WP_010931480.1|557314_558364_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_003814172.1|558511_559090_-	TIGR01841 family phasin	NA	NA	NA	NA	NA
WP_010931479.1|559476_560454_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA	NA
WP_010931478.1|560547_564942_-	dermonecrotic toxin	NA	NA	NA	NA	NA
WP_003814178.1|565142_565991_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931477.1|566149_566962_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
WP_005015810.1|567017_567968_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_154219861.1|567954_568119_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931453.1|568066_568867_-	EI24 domain-containing protein	NA	NA	NA	NA	NA
WP_003814185.1|568928_569312_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_010931454.1|569323_570757_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
WP_003814188.1|570963_571293_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_003814191.1|571295_571964_-	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010931456.1|572227_573148_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
WP_003814195.1|573194_573407_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_010931457.1|573429_573852_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931458.1|573868_574969_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010931459.1|575065_576583_-|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_003814203.1|576658_577498_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
WP_003814205.1|577519_578401_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_003814206.1|578482_579577_-	porin	NA	NA	NA	NA	NA
WP_076879617.1|579870_580821_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_041166340.1|580895_581837_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP021402	Bordetella pertussis strain H696 chromosome, complete genome	4103125	587155	633352	4103125	terminase,tail,tRNA,transposase	uncultured_Caudovirales_phage(17.39%)	53	NA	NA
WP_003814219.1|587155_588187_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_003814221.1|588227_588467_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_010931464.1|588536_590126_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
WP_010931465.1|590125_590674_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_003814226.1|590754_591327_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_010927008.1|591345_592257_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
WP_003814230.1|592330_593299_-	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010931466.1|593421_594495_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
WP_010931467.1|594499_596320_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
WP_010930800.1|596396_597347_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023995786.1|597333_597495_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033446132.1|597435_597771_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_003819076.1|597904_598555_+	carbonic anhydrase	NA	NA	NA	NA	NA
WP_010931468.1|598576_599995_-	amidase	NA	NA	NA	NA	NA
WP_019248554.1|600064_600820_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247734.1|600788_601547_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931471.1|601557_602439_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931472.1|602455_603163_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
WP_010931473.1|603165_603924_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
WP_010931474.1|604133_605876_+	nitrite/sulfite reductase	NA	NA	NA	NA	NA
WP_010925795.1|605868_606393_+	DUF934 domain-containing protein	NA	NA	NA	NA	NA
WP_010931475.1|606432_607227_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248926.1|607394_608468_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|608566_609517_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931452.1|609768_609981_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931451.1|610046_610658_-	S24 family peptidase	NA	NA	NA	NA	NA
WP_010931450.1|611137_611458_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931449.1|611450_612149_-	membrane protein	NA	NA	NA	NA	NA
WP_023853183.1|612163_612385_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|612402_613353_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931448.1|614028_614478_+|terminase	terminase	terminase	C7U0W1	Enterobacteria_phage	61.5	5.2e-39
WP_010931447.1|614464_615742_+|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
WP_010931446.1|615744_617163_+	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
WP_010931445.1|617191_618247_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
WP_010931444.1|618252_618495_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
WP_010931443.1|618617_619220_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
WP_005012808.1|619648_620599_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853024.1|620616_621264_+	hypothetical protein	NA	R9TJ64	Synechococcus_phage	71.1	2.7e-65
WP_010931442.1|621273_621525_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247789.1|621587_622070_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
WP_010931440.1|622071_622272_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931439.1|622271_622667_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
WP_010931438.1|622663_623062_+	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
WP_010931437.1|623058_623481_+	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_010931436.1|623488_623989_+	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
WP_010931435.1|624243_624762_+	hypothetical protein	NA	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
WP_003813412.1|624771_625101_+	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
WP_010931434.1|625118_625409_+	DUF1799 domain-containing protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
WP_010931433.1|625434_628047_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
WP_010931432.1|628056_628416_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931431.1|628483_629017_+	DUF1833 family protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
WP_010931430.1|629013_629403_+	C40 family peptidase	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
WP_010931429.1|629395_633352_+	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
>prophage 5
NZ_CP021402	Bordetella pertussis strain H696 chromosome, complete genome	4103125	639518	693448	4103125	tRNA,transposase	Planktothrix_phage(50.0%)	49	NA	NA
WP_003814636.1|639518_641249_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
WP_010931419.1|641301_641730_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814641.1|641732_642413_+	protein TolQ	NA	NA	NA	NA	NA
WP_003814643.1|642412_642871_+	protein TolR	NA	NA	NA	NA	NA
WP_010931418.1|642907_643882_+	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_010931417.1|643898_645215_+	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_003814650.1|645246_645744_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_003814652.1|645830_646520_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_010931416.1|646519_647569_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_003814657.1|647565_648360_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
WP_019247923.1|648528_648879_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247922.1|648854_649412_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_076879618.1|650336_650555_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|650541_651492_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814416.1|653770_654859_+	spore maturation protein	NA	NA	NA	NA	NA
WP_003814419.1|654861_656304_-	pyruvate kinase	NA	NA	NA	NA	NA
WP_094145973.1|656408_657554_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
WP_010931413.1|657585_658383_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_010931412.1|658407_659967_-	chaperone SurA	NA	NA	NA	NA	NA
WP_010931411.1|659963_662336_-	LPS-assembly protein LptD	NA	NA	NA	NA	NA
WP_010931410.1|662445_663549_+	phosphotransferase	NA	NA	NA	NA	NA
WP_010931409.1|663548_664241_+	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
WP_003814436.1|664384_665086_+	membrane protein	NA	NA	NA	NA	NA
WP_003814437.1|665070_665448_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_005012067.1|666179_667130_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852750.1|667116_667260_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814441.1|667289_668162_-	oxaloacetate decarboxylase	NA	NA	NA	NA	NA
WP_003814443.1|668502_668721_+	DUF1059 domain-containing protein	NA	NA	NA	NA	NA
WP_019247242.1|668760_670140_-	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_010929976.1|670181_671579_-	amidase family protein	NA	NA	NA	NA	NA
WP_010927038.1|671618_673271_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	6.0e-16
WP_010929977.1|673274_674159_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929978.1|674158_675100_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010929979.1|675178_676798_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929980.1|676964_677780_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814459.1|677847_678417_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005013747.1|678417_679368_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814461.1|680022_681120_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_003814462.1|681153_682419_+	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_010929591.1|682576_683527_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929982.1|683770_684361_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_010929983.1|684376_686821_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_003814467.1|686940_687912_-	FecR family protein	NA	NA	NA	NA	NA
WP_023852739.1|688043_688568_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_005012067.1|688527_689478_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929984.1|689699_691895_-	DUF1156 domain-containing protein	NA	NA	NA	NA	NA
WP_020699729.1|691967_692375_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_077068980.1|692322_692511_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|692497_693448_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NZ_CP021402	Bordetella pertussis strain H696 chromosome, complete genome	4103125	816037	884013	4103125	transposase	Bacillus_phage(33.33%)	59	NA	NA
WP_023994644.1|816037_817054_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003813988.1|817250_818234_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930019.1|819832_821221_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003813991.1|821251_822241_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813992.1|822351_823584_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003813993.1|823865_824666_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930018.1|824688_826920_-	BCCT family transporter	NA	NA	NA	NA	NA
WP_010930017.1|827707_828154_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_003813996.1|828175_828922_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
WP_003813997.1|829065_830043_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_010930016.1|830676_831288_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
WP_003813999.1|831281_832499_-	threonine ammonia-lyase	NA	NA	NA	NA	NA
WP_005013747.1|832639_833590_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814000.1|833586_834306_-	lipoprotein	NA	NA	NA	NA	NA
WP_003821234.1|834426_836586_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_003814002.1|836676_836946_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_005019401.1|837034_837241_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814003.1|837239_837767_+	lipoprotein	NA	NA	NA	NA	NA
WP_003814004.1|837785_838565_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010930015.1|838732_839749_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_003814006.1|839821_840313_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_003814007.1|840323_842039_-	acetolactate synthase 3 catalytic subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
WP_005012067.1|843202_844153_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248601.1|844149_846000_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
WP_010930052.1|846380_847040_+	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
WP_010930053.1|847127_847280_+	vir-repressed protein	NA	NA	NA	NA	NA
WP_003809770.1|847388_847556_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930054.1|847567_848248_-	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
WP_010930055.1|848529_849246_+	flagellar brake protein	NA	NA	NA	NA	NA
WP_010930056.1|849260_850562_-	phospholipase	NA	NA	NA	NA	NA
WP_029444137.1|852706_855595_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_010930057.1|855818_857171_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_004568140.1|857199_857721_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_003819989.1|857717_859172_+	carboxylase	NA	NA	NA	NA	NA
WP_023852826.1|859206_859455_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247557.1|859560_860436_+	amidohydrolase	NA	NA	NA	NA	NA
WP_010930060.1|860461_861517_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930061.1|861529_862321_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930062.1|862353_863724_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_023995501.1|864776_864914_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929591.1|864900_865851_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930064.1|865903_866125_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810832.1|866284_866497_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810835.1|866616_867735_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_003810837.1|867831_868047_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003810839.1|868240_868492_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930066.1|868604_869555_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003810840.1|869551_869935_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_010930067.1|869989_871807_-	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
WP_010930068.1|871953_872781_+	oxidoreductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
WP_010930069.1|872826_873807_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_003810850.1|873803_874016_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003810851.1|874012_875194_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_019248496.1|875357_876092_+	serine/threonine protein phosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
WP_010930071.1|876093_878706_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_003810859.1|878841_880755_-	S9 family peptidase	NA	NA	NA	NA	NA
WP_010930072.1|881370_881781_-	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_003810865.1|881878_882964_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_005012067.1|883062_884013_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_CP021402	Bordetella pertussis strain H696 chromosome, complete genome	4103125	907191	977458	4103125	transposase	Streptococcus_phage(14.29%)	57	NA	NA
WP_005012067.1|907191_908142_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486062.1|908222_909134_+	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	38.8	8.0e-47
WP_010930108.1|909194_910340_-	lytic murein transglycosylase B	NA	NA	NA	NA	NA
WP_003821521.1|910359_911274_+	histone deacetylase family protein	NA	A0A2K9KZC4	Tupanvirus	34.7	9.8e-45
WP_010930110.1|911345_912095_+	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
WP_010930111.1|912094_913024_+	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
WP_003821527.1|913267_915094_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003813333.1|915176_915818_+	peroxiredoxin	NA	NA	NA	NA	NA
WP_003821528.1|916007_917042_+	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930112.1|918878_919943_+	sulfate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.3	3.8e-24
WP_010930113.1|920740_921649_+	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
WP_023852693.1|923136_924411_+	PA0069 family radical SAM protein	NA	NA	NA	NA	NA
WP_023852686.1|924564_924945_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014905652.1|924952_925825_-	EamA family transporter	NA	NA	NA	NA	NA
WP_003813315.1|926130_926511_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_003813314.1|926721_927447_+	CoA pyrophosphatase	NA	NA	NA	NA	NA
WP_005012067.1|927542_928493_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930118.1|928597_929647_+	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
WP_010929632.1|929784_930801_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010926548.1|932309_932882_-	chorismate lyase	NA	NA	NA	NA	NA
WP_010930119.1|932941_933673_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_029443805.1|933724_934642_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930121.1|935449_938629_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_014486063.1|938625_940008_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_010930123.1|940077_940329_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_023853098.1|940474_941125_-	SCO family protein	NA	NA	NA	NA	NA
WP_019248379.1|941275_943390_-	M3 family metallopeptidase	NA	NA	NA	NA	NA
WP_003811948.1|943465_944317_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
WP_010930126.1|944313_944940_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003817147.1|944936_946691_-	PAS domain S-box protein	NA	NA	NA	NA	NA
WP_010930127.1|946983_949689_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_010930128.1|949701_951363_+	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
WP_010930129.1|951375_953166_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
WP_003817151.1|953387_954563_-	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_010929584.1|954605_955556_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930130.1|955654_956395_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_010930131.1|956589_958626_+	transketolase	NA	NA	NA	NA	NA
WP_010930132.1|958643_959654_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_010930133.1|959771_960965_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_010930134.1|960994_961768_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010930135.1|961764_962955_-	acetate kinase	NA	NA	NA	NA	NA
WP_003809454.1|962980_963919_-	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_010930136.1|963915_966264_-	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
WP_029443834.1|966418_967126_-	glutathione transferase	NA	NA	NA	NA	NA
WP_023853531.1|967163_968297_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994624.1|968389_968542_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930138.1|968573_969122_-	diguanylate cyclase	NA	NA	NA	NA	NA
WP_003819814.1|969140_969626_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_010930139.1|969803_970742_+	DnaJ domain-containing protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
WP_003809467.1|970744_971062_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247197.1|971107_972052_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_010930141.1|973732_974383_+	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
WP_003809479.1|974436_974772_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930142.1|974768_975629_+	M23 family metallopeptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
WP_003819817.1|975645_975927_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003809486.1|976000_976264_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_005012067.1|976507_977458_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 8
NZ_CP021402	Bordetella pertussis strain H696 chromosome, complete genome	4103125	989676	1045401	4103125	holin,tRNA,transposase	uncultured_Mediterranean_phage(37.5%)	45	NA	NA
WP_010931363.1|989676_990693_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003819773.1|991523_992531_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_014486064.1|992527_994171_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
WP_023995116.1|994167_995070_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_003809396.1|995195_995669_-	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_010930151.1|995658_996681_-	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
WP_015041211.1|996677_998105_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_010931363.1|999042_1000059_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003809411.1|1000391_1001327_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
WP_010930154.1|1001376_1003257_-	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_003809416.1|1003323_1003668_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
WP_010930155.1|1003812_1004949_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
WP_023853534.1|1004945_1006019_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_003809423.1|1006176_1007613_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
WP_010930157.1|1007703_1008345_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_010930160.1|1011186_1012608_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_003809431.1|1012871_1013588_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809432.1|1013672_1013990_+	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_003819794.1|1014030_1014444_+|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_010930161.1|1014445_1014805_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023853525.1|1014847_1016392_-	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
WP_010930163.1|1016475_1017306_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_010930164.1|1017340_1018495_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_010930165.1|1018537_1019410_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014486065.1|1019526_1021815_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_003809441.1|1023021_1023486_+	barstar family protein	NA	NA	NA	NA	NA
WP_005013747.1|1023512_1024463_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930167.1|1024830_1025607_-	phosphate ABC transporter ATP-binding protein PstB	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
WP_003809638.1|1025651_1026509_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_010930169.1|1026530_1027547_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_014486066.1|1027681_1028722_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
WP_010930171.1|1028916_1030998_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_010930172.1|1031233_1032727_+	exopolyphosphatase	NA	NA	NA	NA	NA
WP_003809629.1|1032957_1033752_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003819875.1|1033972_1035331_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_010930173.1|1035327_1036170_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
WP_010930174.1|1036188_1038075_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
WP_010930175.1|1038312_1038945_-	RlmE family RNA methyltransferase	NA	NA	NA	NA	NA
WP_003809618.1|1038963_1039566_+	YhbY family RNA-binding protein	NA	NA	NA	NA	NA
WP_023995509.1|1039569_1039731_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1039717_1040668_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930177.1|1041470_1042271_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812707.1|1042314_1043301_-	homoserine kinase	NA	NA	NA	NA	NA
WP_010930178.1|1043440_1044454_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_005012067.1|1044450_1045401_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NZ_CP021402	Bordetella pertussis strain H696 chromosome, complete genome	4103125	1080752	1146336	4103125	tRNA,transposase	Erysipelothrix_phage(33.33%)	53	NA	NA
WP_023853221.1|1080752_1082549_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_019248398.1|1082548_1083517_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003816844.1|1083586_1084432_+	PHP domain-containing protein	NA	NA	NA	NA	NA
WP_003812405.1|1084499_1085054_+	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_010930198.1|1085100_1086051_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930199.1|1086149_1086782_-	fimbrial protein	NA	NA	NA	NA	NA
WP_010930200.1|1086946_1089229_-	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
WP_010930201.1|1089383_1092080_-	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
WP_010930202.1|1092205_1092694_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_003813631.1|1095104_1097975_+	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_010930204.1|1098020_1099235_+	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_003813626.1|1099464_1100892_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
WP_019248962.1|1100932_1102081_+	cell division protein ZapE	NA	NA	NA	NA	NA
WP_010930206.1|1102093_1102852_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003813621.1|1102939_1103842_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929591.1|1103838_1104789_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930207.1|1104918_1105902_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003813618.1|1105956_1106679_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930211.1|1108157_1109513_+|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010930212.1|1109593_1111969_-	RNA-binding transcriptional accessory protein	NA	NA	NA	NA	NA
WP_010930213.1|1112133_1114209_+	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	30.0	2.4e-75
WP_003813594.1|1114270_1115071_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_010930214.1|1115172_1116135_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_019247742.1|1116122_1116878_+	peptidoglycan editing factor PgeF	NA	NA	NA	NA	NA
WP_010930216.1|1116985_1118623_+	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA	NA
WP_003813586.1|1118690_1119428_+	acetoacetyl-CoA reductase	NA	NA	NA	NA	NA
WP_003813585.1|1119530_1120106_+	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA	NA
WP_010930217.1|1120278_1120815_+	membrane protein	NA	NA	NA	NA	NA
WP_003813580.1|1120817_1121162_+	cupredoxin domain-containing protein	NA	NA	NA	NA	NA
WP_010930218.1|1121177_1122023_+	membrane protein	NA	NA	NA	NA	NA
WP_003821443.1|1122061_1123441_+	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_003813574.1|1123518_1124400_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_010929956.1|1124498_1125449_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811632.1|1125445_1125856_-	VOC family protein	NA	NA	NA	NA	NA
WP_010930219.1|1125963_1126818_-	amidohydrolase family protein	NA	NA	NA	NA	NA
WP_003811636.1|1126810_1127773_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930220.1|1127818_1128943_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	28.3	1.5e-31
WP_010930221.1|1129054_1129927_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930222.1|1130051_1130831_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930223.1|1130984_1132406_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930224.1|1132840_1134538_+	sodium:solute symporter family protein	NA	NA	NA	NA	NA
WP_003811651.1|1134566_1134689_+	membrane protein	NA	NA	NA	NA	NA
WP_010930225.1|1134764_1135706_-	LD-carboxypeptidase	NA	NA	NA	NA	NA
WP_010930226.1|1136032_1136779_+	aldolase	NA	NA	NA	NA	NA
WP_033446252.1|1136786_1137713_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930228.1|1137834_1138752_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003811660.1|1138791_1139745_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811662.1|1139769_1140348_+	amino acid synthesis family protein	NA	NA	NA	NA	NA
WP_010930229.1|1142021_1142630_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930230.1|1142707_1143061_-	NirD/YgiW/YdeI family stress tolerance protein	NA	NA	NA	NA	NA
WP_010930231.1|1143144_1144134_-	succinylglutamate desuccinylase	NA	NA	NA	NA	NA
WP_077069202.1|1144336_1145287_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_023853639.1|1145385_1146336_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NZ_CP021402	Bordetella pertussis strain H696 chromosome, complete genome	4103125	1308901	1375401	4103125	transposase	uncultured_Caudovirales_phage(40.0%)	56	NA	NA
WP_010930208.1|1308901_1309852_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811361.1|1309917_1310097_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930309.1|1310213_1310936_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_010930310.1|1310955_1312101_-	DUF3182 family protein	NA	NA	NA	NA	NA
WP_010930208.1|1313008_1313959_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811370.1|1314146_1315349_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_003811372.1|1315345_1316104_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003811375.1|1316497_1317130_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930311.1|1318085_1320686_+	BP1344/BB2830 family autotransporter	NA	NA	NA	NA	NA
WP_010930312.1|1320673_1324093_-	TM0106 family RecB-like putative nuclease	NA	NA	NA	NA	NA
WP_010930313.1|1324100_1325006_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811381.1|1325144_1325723_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010930314.1|1325719_1326631_+	CoA ester lyase	NA	NA	NA	NA	NA
WP_010930315.1|1326644_1327325_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930316.1|1327526_1329566_+	acetyl-CoA synthetase	NA	NA	NA	NA	NA
WP_014486069.1|1329584_1330571_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930317.1|1330596_1331394_+	citryl-CoA lyase	NA	NA	NA	NA	NA
WP_003811389.1|1331390_1332584_+	CoA transferase	NA	NA	NA	NA	NA
WP_003811391.1|1332580_1333543_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811393.1|1333560_1334601_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811396.1|1334588_1335197_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_010930318.1|1336785_1337781_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003811400.1|1337800_1338979_+	mandelate racemase/muconate lactonizing enzyme family protein	NA	NA	NA	NA	NA
WP_003811401.1|1338989_1339907_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_010930208.1|1339962_1340913_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812022.1|1341011_1341782_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.1	9.8e-30
WP_003812020.1|1341778_1342459_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010930319.1|1342525_1343314_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931363.1|1343560_1344577_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930321.1|1344882_1346037_+	flagellar type III secretion system protein FlhB	NA	NA	NA	NA	NA
WP_003817170.1|1350542_1351025_-	flagellar protein FlgN	NA	NA	NA	NA	NA
WP_003817172.1|1351042_1351333_-	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA	NA
WP_010930322.1|1351459_1352170_-	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA	NA
WP_010930323.1|1352353_1352761_+	flagellar basal body rod protein FlgB	NA	NA	NA	NA	NA
WP_003817176.1|1352773_1353193_+	flagellar basal body rod protein FlgC	NA	NA	NA	NA	NA
WP_010930324.1|1353240_1353945_+	flagellar basal body rod modification protein FlgD	NA	NA	NA	NA	NA
WP_003817180.1|1354010_1355432_+	flagellar hook-basal body complex protein	NA	NA	NA	NA	NA
WP_003817181.1|1355470_1356235_+	flagellar basal body rod protein FlgF	NA	NA	NA	NA	NA
WP_010930325.1|1356278_1357064_+	flagellar basal-body rod protein FlgG	NA	NA	NA	NA	NA
WP_010930326.1|1357063_1357753_+	flagellar basal body L-ring protein FlgH	NA	NA	NA	NA	NA
WP_010930327.1|1357755_1358889_+	flagellar basal body P-ring protein FlgI	NA	NA	NA	NA	NA
WP_010930328.1|1358906_1359929_+	flagellar assembly peptidoglycan hydrolase FlgJ	NA	A0A088F6W1	Sulfitobacter_phage	31.4	1.9e-12
WP_010930329.1|1359998_1361645_+	flagellar hook-associated protein FlgK	NA	NA	NA	NA	NA
WP_010930330.1|1361678_1363211_+	flagellar hook-associated protein 3	NA	NA	NA	NA	NA
WP_010930331.1|1363289_1365110_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	52.6	6.4e-11
WP_010930332.1|1365230_1366850_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	45.3	1.5e-08
WP_014486070.1|1367028_1368471_+	PAS domain-containing protein	NA	A0A1B0V854	Salmonella_phage	41.8	1.0e-35
WP_010929632.1|1368687_1369704_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010930333.1|1369750_1370539_-	flagellar biosynthetic protein FliR	NA	NA	NA	NA	NA
WP_003811859.1|1370561_1370831_-	flagellar biosynthesis protein FliQ	NA	NA	NA	NA	NA
WP_015041547.1|1370847_1371639_-	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA	NA
WP_003811855.1|1371650_1371992_-	flagellar biosynthetic protein FliO	NA	NA	NA	NA	NA
WP_010930335.1|1372002_1372503_-	flagellar motor switch protein FliN	NA	NA	NA	NA	NA
WP_003811852.1|1372495_1373506_-	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
WP_003811850.1|1373508_1374081_-	flagellar basal body-associated protein FliL	NA	NA	NA	NA	NA
WP_005012067.1|1374450_1375401_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP021402	Bordetella pertussis strain H696 chromosome, complete genome	4103125	1403572	1442162	4103125	protease,transposase	Emiliania_huxleyi_virus(14.29%)	36	NA	NA
WP_010930352.1|1403572_1404907_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_010930353.1|1404959_1407296_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
WP_003811782.1|1407421_1407985_+	OmpH family outer membrane protein	NA	NA	NA	NA	NA
WP_010930354.1|1407993_1409085_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
WP_003811776.1|1409156_1409612_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
WP_010930355.1|1409612_1410407_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
WP_010930356.1|1410403_1411585_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
WP_003811770.1|1411571_1412177_+	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	40.2	8.8e-26
WP_003811768.1|1412173_1412947_+	RNA methyltransferase	NA	NA	NA	NA	NA
WP_010930357.1|1412958_1413786_-	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_010930358.1|1413947_1416311_+	phosphoenolpyruvate synthase	NA	A0A1V0SGR7	Hokovirus	35.9	2.2e-165
WP_010930359.1|1416378_1417098_-	glutamine amidotransferase	NA	NA	NA	NA	NA
WP_003811761.1|1417221_1417647_+	membrane protein	NA	NA	NA	NA	NA
WP_005012067.1|1417681_1418632_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811759.1|1418749_1419676_+	paraslipin	NA	NA	NA	NA	NA
WP_010930360.1|1419741_1420899_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
WP_003811754.1|1420879_1421347_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
WP_010930800.1|1421494_1422445_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811752.1|1422461_1422896_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_003811750.1|1422885_1423236_+	RnfH family protein	NA	NA	NA	NA	NA
WP_077069203.1|1423432_1424587_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_003811746.1|1424583_1425756_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003811743.1|1425803_1426697_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003811741.1|1426742_1427180_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010930362.1|1427239_1427929_+	VIT family protein	NA	NA	NA	NA	NA
WP_010930363.1|1427938_1428889_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879624.1|1428987_1429938_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_003819864.1|1430036_1431020_-	transaldolase	NA	H6WFR1	Cyanophage	29.2	5.9e-11
WP_010930365.1|1431282_1432380_+	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.2	5.3e-53
WP_010930366.1|1432390_1435633_+	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_003809593.1|1436654_1437299_-	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_010930367.1|1437309_1438209_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003809599.1|1438256_1439342_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	6.4e-27
WP_010930368.1|1439338_1441033_-	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_023996304.1|1441066_1441225_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|1441211_1442162_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
NZ_CP021402	Bordetella pertussis strain H696 chromosome, complete genome	4103125	1844272	1909821	4103125	protease,tRNA,transposase	Lake_Baikal_phage(20.0%)	59	NA	NA
WP_010929577.1|1844272_1845223_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_153302779.1|1845209_1845368_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930573.1|1845423_1846233_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931070.1|1846357_1847308_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930572.1|1847304_1848198_-	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_003812452.1|1848322_1848517_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_003812453.1|1848516_1848858_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_010930571.1|1848867_1850730_-	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	42.4	3.0e-101
WP_003812456.1|1850859_1851372_-	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA	NA
WP_003812458.1|1851374_1851698_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	52.8	6.8e-25
WP_003812460.1|1851699_1852110_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	79.0	7.5e-53
WP_010930570.1|1852147_1853359_-	IscS subfamily cysteine desulfurase	NA	NA	NA	NA	NA
WP_003812463.1|1853376_1853889_-	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA	NA
WP_010930569.1|1854104_1854596_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
WP_010930568.1|1854848_1856885_-	excinuclease ABC subunit UvrB	NA	NA	NA	NA	NA
WP_019247244.1|1856962_1858165_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_003812472.1|1858215_1858944_+	transcriptional repressor LexA	NA	A0A2H4JG58	uncultured_Caudovirales_phage	50.7	2.8e-10
WP_005012067.1|1860501_1861452_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247934.1|1862022_1862235_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247935.1|1862252_1862984_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812478.1|1863018_1863660_-	CoA transferase subunit B	NA	NA	NA	NA	NA
WP_023853213.1|1863652_1864369_-	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA	NA
WP_010930564.1|1866533_1867310_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930563.1|1867331_1868489_-	thiolase	NA	NA	NA	NA	NA
WP_003812491.1|1868485_1868917_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015063637.1|1868913_1869717_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_029443773.1|1869730_1870186_-	MaoC family dehydratase	NA	NA	NA	NA	NA
WP_010930560.1|1870198_1871170_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930559.1|1871235_1872459_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247936.1|1872686_1873637_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930557.1|1873760_1876214_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.0	1.5e-220
WP_010930556.1|1876402_1877707_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	53.8	3.2e-129
WP_003812508.1|1877811_1878465_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	57.5	6.8e-56
WP_010930555.1|1878467_1879778_-	trigger factor	NA	NA	NA	NA	NA
WP_076879561.1|1879956_1880535_+	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	33.7	1.0e-23
WP_010930553.1|1880646_1880847_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.4	7.4e-14
WP_003812519.1|1881192_1881759_-	DUF924 family protein	NA	NA	NA	NA	NA
WP_010930551.1|1881842_1882046_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.1	1.6e-16
WP_003812524.1|1882352_1882673_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003812526.1|1882714_1882996_-	membrane protein	NA	NA	NA	NA	NA
WP_010930550.1|1883070_1884327_-	autotransporter Phg	NA	NA	NA	NA	NA
WP_010930549.1|1884709_1885039_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003812536.1|1886609_1887431_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
WP_010930548.1|1887430_1888570_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
WP_019247938.1|1888576_1889473_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_010930546.1|1889469_1891395_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	31.8	1.1e-66
WP_010926400.1|1891754_1894367_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_003812546.1|1894419_1896720_-	UvrD-helicase domain-containing protein	NA	A7KV33	Bacillus_phage	35.9	9.9e-110
WP_003812548.1|1896716_1897925_-	aminotransferase	NA	NA	NA	NA	NA
WP_010930545.1|1898186_1898561_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|1898557_1899508_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879626.1|1899606_1901601_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.3	4.4e-21
WP_010930543.1|1901660_1902626_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_010930542.1|1902615_1905477_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
WP_010930541.1|1905479_1905986_+	lipoprotein signal peptidase	NA	NA	NA	NA	NA
WP_010930540.1|1906090_1907299_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
WP_033446178.1|1907300_1908239_-	membrane protein	NA	NA	NA	NA	NA
WP_010930538.1|1908400_1908874_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012808.1|1908870_1909821_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
NZ_CP021402	Bordetella pertussis strain H696 chromosome, complete genome	4103125	2226524	2287872	4103125	tRNA,transposase	Yellowstone_lake_phycodnavirus(12.5%)	52	NA	NA
WP_005013747.1|2226524_2227475_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811701.1|2227591_2228311_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930605.1|2228483_2229470_+	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010930604.1|2229470_2229953_+	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_003811706.1|2229956_2231240_+	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_003811709.1|2231236_2232175_+	citrate lyase subunit beta	NA	NA	NA	NA	NA
WP_010930603.1|2232171_2233881_+	thiamine pyrophosphate-binding protein	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	27.3	5.9e-35
WP_010930602.1|2233890_2235138_+	Zn-dependent hydrolase	NA	NA	NA	NA	NA
WP_003811716.1|2236748_2238038_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA	NA
WP_003811719.1|2239175_2239949_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	3.1e-31
WP_010930601.1|2240610_2241354_-	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930600.1|2241428_2242169_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930599.1|2242364_2243201_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_010930598.1|2243251_2244022_-	TatD family hydrolase	NA	NA	NA	NA	NA
WP_010930597.1|2244071_2245124_-	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
WP_003811733.1|2245120_2245747_-	dTMP kinase	NA	A0A1L2BX49	Bacteriophage	35.1	1.6e-22
WP_077274084.1|2245743_2246790_-	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
WP_010930595.1|2246956_2247973_+	folate-binding protein YgfZ	NA	NA	NA	NA	NA
WP_005012067.1|2248071_2249022_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930797.1|2251762_2253052_-	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_003810870.1|2253170_2253641_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930799.1|2253651_2254860_-	NO-inducible flavohemoprotein	NA	NA	NA	NA	NA
WP_003810867.1|2255006_2255471_+	GatB/YqeY domain-containing protein	NA	A0A0K2FLI9	Brevibacillus_phage	32.4	3.9e-05
WP_014905945.1|2255494_2256445_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930521.1|2257429_2258203_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930520.1|2258199_2259198_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930519.1|2259282_2260059_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.2	1.2e-30
WP_076879556.1|2260214_2261882_-	ABC-F family ATPase	NA	A0A1V0SKJ1	Klosneuvirus	28.9	1.6e-53
WP_003816541.1|2262199_2263324_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003810992.1|2263450_2264074_+	TRAP transporter small permease subunit	NA	NA	NA	NA	NA
WP_010930517.1|2264070_2265972_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_010930516.1|2266020_2266815_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010930515.1|2266827_2267829_-	muramoyltetrapeptide carboxypeptidase	NA	NA	NA	NA	NA
WP_004568494.1|2267825_2268332_-|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	S4VYT2	Pandoravirus	38.4	3.4e-07
WP_010930513.1|2268324_2269173_-	hydrolase	NA	NA	NA	NA	NA
WP_019247780.1|2269270_2269813_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2269856_2270807_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930511.1|2270962_2271289_-	cation:proton antiporter	NA	NA	NA	NA	NA
WP_003810975.1|2271285_2271570_-	K+/H+ antiporter subunit F	NA	NA	NA	NA	NA
WP_010930510.1|2271566_2272046_-	Na+/H+ antiporter subunit E	NA	NA	NA	NA	NA
WP_004568496.1|2272042_2273671_-	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA	NA
WP_003810969.1|2273667_2274012_-	Na+/H+ antiporter subunit C	NA	NA	NA	NA	NA
WP_010930509.1|2274011_2276945_-	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA	NA
WP_010929588.1|2278103_2279054_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003811452.1|2279152_2279449_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930508.1|2279555_2280473_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930507.1|2280477_2281191_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930506.1|2281204_2282176_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019249653.1|2283895_2284276_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010930504.1|2284279_2285467_+	MFS transporter	NA	NA	NA	NA	NA
WP_010930503.1|2285905_2286628_+	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
WP_005013747.1|2286921_2287872_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NZ_CP021402	Bordetella pertussis strain H696 chromosome, complete genome	4103125	2308663	2379817	4103125	transposase	Tetraselmis_virus(10.0%)	56	NA	NA
WP_005012067.1|2308663_2309614_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852967.1|2310166_2311792_-	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
WP_010930475.1|2311841_2312876_-	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_010930476.1|2312878_2314225_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930477.1|2314221_2315736_-	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930478.1|2315726_2316737_-	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_010930479.1|2317210_2318152_-	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_010930480.1|2318160_2319129_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_010930481.1|2320668_2321637_+	transporter	NA	NA	NA	NA	NA
WP_010930482.1|2321814_2322804_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010926609.1|2322850_2323609_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930483.1|2323798_2324536_+	TerC family protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
WP_153302777.1|2324486_2324648_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|2324634_2325585_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003816696.1|2325769_2326552_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
WP_003810743.1|2326545_2327247_+	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003810741.1|2327486_2328089_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_154219857.1|2329273_2329429_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2329415_2330366_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486074.1|2330362_2331919_-	LTA synthase family protein	NA	NA	NA	NA	NA
WP_010930486.1|2331911_2332685_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_005013747.1|2332743_2333694_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023852812.1|2333775_2334951_-	capsular biosynthesis protein	NA	NA	NA	NA	NA
WP_010930473.1|2334964_2337022_-	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_010930472.1|2337018_2338044_-	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	NA	A0A2K9L4U8	Tupanvirus	44.2	4.7e-72
WP_010930471.1|2338055_2339345_-	Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB	NA	NA	NA	NA	NA
WP_010930470.1|2339367_2340465_-	capsular polysaccharide export protein	NA	NA	NA	NA	NA
WP_003811224.1|2340461_2341352_-	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_010930469.1|2341348_2343433_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_010930468.1|2343464_2344634_-	capsule polysaccharide transporter	NA	NA	NA	NA	NA
WP_014486073.1|2344675_2345416_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_010930466.1|2345415_2346186_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010930465.1|2347041_2347827_+	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	32.0	1.1e-12
WP_010930464.1|2347853_2349938_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247170.1|2350105_2352061_+	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_003811209.1|2352384_2352885_-	DNA starvation/stationary phase protection protein	NA	W5S6G8	Pithovirus	35.5	6.4e-14
WP_010930461.1|2352983_2354510_-	CoA-acylating methylmalonate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010930460.1|2354647_2355535_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811203.1|2355549_2356503_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	26.5	7.2e-14
WP_033446218.1|2356554_2358645_-	ATP-dependent DNA helicase RecG	NA	NA	NA	NA	NA
WP_010930458.1|2358660_2359047_-	reactive intermediate/imine deaminase	NA	NA	NA	NA	NA
WP_010930457.1|2361740_2362544_-	2,5-didehydrogluconate reductase DkgB	NA	A0A2H4PQR8	Staphylococcus_phage	32.4	2.0e-33
WP_010930456.1|2363837_2364740_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811187.1|2364804_2365581_-	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
WP_010930455.1|2365902_2366952_+	Fe(3+) ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930454.1|2367075_2368746_+	iron ABC transporter permease	NA	NA	NA	NA	NA
WP_019248220.1|2368750_2369545_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.4	8.3e-16
WP_005012067.1|2369643_2370594_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930453.1|2370613_2371519_-	pirin family protein	NA	NA	NA	NA	NA
WP_003811176.1|2371596_2372295_-	pirin family protein	NA	NA	NA	NA	NA
WP_010930452.1|2372454_2373399_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003811170.1|2373408_2374899_-	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_003811167.1|2374895_2375963_-	PAS domain-containing protein	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
WP_003811164.1|2376026_2377439_-	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_010930450.1|2377624_2378845_-	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
WP_005012808.1|2378866_2379817_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
NZ_CP021402	Bordetella pertussis strain H696 chromosome, complete genome	4103125	2464016	2515188	4103125	tRNA,transposase	Salmonella_phage(20.0%)	48	NA	NA
WP_005012067.1|2464016_2464967_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812577.1|2465065_2465836_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.5	8.3e-29
WP_010930397.1|2465832_2466504_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuD	NA	NA	NA	NA	NA
WP_003812581.1|2466500_2467142_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuC	NA	NA	NA	NA	NA
WP_010930396.1|2467154_2468075_-	ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB	NA	NA	NA	NA	NA
WP_010930395.1|2468235_2469396_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930394.1|2469437_2470388_-	ornithine cyclodeaminase family protein	NA	NA	NA	NA	NA
WP_010930393.1|2470986_2471211_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930392.1|2471375_2473070_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
WP_003812598.1|2473191_2473461_-	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
WP_003812601.1|2473576_2473975_-	PTS mannose transporter subunit IIA	NA	NA	NA	NA	NA
WP_010930391.1|2473985_2474942_-	glutathione synthase	NA	NA	NA	NA	NA
WP_033446215.1|2475078_2475624_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	29.9	9.1e-14
WP_003812608.1|2475644_2477594_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.0	4.1e-125
WP_019248759.1|2477981_2478758_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003812612.1|2478763_2479156_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2479577_2480528_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010930389.1|2480524_2481622_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	37.3	3.5e-20
WP_076879548.1|2481653_2482604_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814009.1|2484385_2485627_-	MFS transporter	NA	NA	NA	NA	NA
WP_003814010.1|2485638_2486412_-	peroxide stress protein YaaA	NA	NA	NA	NA	NA
WP_005012067.1|2486438_2487389_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814011.1|2487487_2488270_-	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_003814012.1|2488358_2489585_-	transporter	NA	NA	NA	NA	NA
WP_003814013.1|2490310_2491696_+	alcaligin siderophore biosynthesis protein AlcA	NA	NA	NA	NA	NA
WP_003814014.1|2491714_2492320_+	alcaligin siderophore biosynthesis protein AlcB	NA	NA	NA	NA	NA
WP_010930939.1|2492316_2494173_+	alcaligin siderophore biosynthesis protein AlcC	NA	NA	NA	NA	NA
WP_003814016.1|2494169_2494970_+	alcaligin siderophore biosynthesis protein AlcD	NA	NA	NA	NA	NA
WP_005013753.1|2494984_2496178_+	alcaligin siderophore biosynthesis protein AlcE	NA	NA	NA	NA	NA
WP_003814017.1|2496245_2497220_+	alcaligin siderophore biosynthesis transcriptional regulator AlcR	NA	NA	NA	NA	NA
WP_010930940.1|2497342_2498566_+	alcaligin siderophore export MFS transporter Bcr	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
WP_010930941.1|2498676_2500881_+	TonB-dependent alcaligin siderophore receptor FauA	NA	NA	NA	NA	NA
WP_003814020.1|2501175_2501835_+	NAAT family transporter	NA	NA	NA	NA	NA
WP_019247690.1|2501842_2502049_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814021.1|2502387_2503143_+	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_003814022.1|2503158_2503320_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814023.1|2503413_2503929_+	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
WP_003814024.1|2504201_2504519_+	virulence factor	NA	NA	NA	NA	NA
WP_003814025.1|2504706_2504955_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010930944.1|2505233_2506589_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
WP_003814028.1|2506635_2508015_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
WP_010930946.1|2508077_2508710_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_003814032.1|2508709_2511070_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
WP_010930948.1|2511111_2512071_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
WP_010929073.1|2512057_2512744_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005015014.1|2512740_2513073_+	multidrug transporter	NA	NA	NA	NA	NA
WP_005012067.1|2513188_2514139_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|2514237_2515188_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
NZ_CP021402	Bordetella pertussis strain H696 chromosome, complete genome	4103125	2613483	2658667	4103125	tRNA,transposase	Geobacillus_virus(20.0%)	47	NA	NA
WP_010929591.1|2613483_2614434_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004567479.1|2614544_2614727_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931004.1|2614826_2615423_-	lipoprotein	NA	NA	NA	NA	NA
WP_010931005.1|2615606_2616698_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003812822.1|2617197_2617608_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931006.1|2617666_2618008_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	42.2	2.8e-13
WP_010931007.1|2618013_2620431_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_010926359.1|2620443_2621466_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.6	1.0e-26
WP_003812832.1|2621540_2621900_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_003812834.1|2621915_2622113_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_010929584.1|2622448_2623399_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_155120812.1|2624430_2624577_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931008.1|2624554_2626003_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931009.1|2626117_2626399_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153302789.1|2626351_2626516_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|2626502_2627453_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003820420.1|2627697_2628411_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_019247724.1|2628533_2628761_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003816758.1|2629055_2629694_-	DedA family protein	NA	NA	NA	NA	NA
WP_023994671.1|2629766_2630837_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_010929591.1|2630833_2631784_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931012.1|2632199_2632724_-	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
WP_004567322.1|2632727_2632997_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931013.1|2633195_2634257_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931014.1|2634340_2635975_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
WP_010931015.1|2635976_2636780_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931016.1|2636808_2637768_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931017.1|2637771_2639286_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019248147.1|2639322_2640327_-	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_033456131.1|2640334_2640568_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931018.1|2640757_2641228_-	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
WP_010931019.1|2641263_2641875_-	LysE family translocator	NA	NA	NA	NA	NA
WP_010931020.1|2641905_2642529_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_010931021.1|2642609_2644142_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
WP_010931022.1|2644176_2645418_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931023.1|2645461_2646493_-	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
WP_010931024.1|2646489_2647659_-	NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_010931025.1|2647652_2648333_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931026.1|2648494_2649337_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931027.1|2649499_2650471_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010931028.1|2650642_2651521_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931029.1|2651543_2652614_-	FUSC family protein	NA	NA	NA	NA	NA
WP_005013747.1|2652654_2653605_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879564.1|2653591_2653777_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931030.1|2653897_2655256_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_010931031.1|2655367_2657095_+	sulfate permease	NA	NA	NA	NA	NA
WP_005013747.1|2657716_2658667_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NZ_CP021402	Bordetella pertussis strain H696 chromosome, complete genome	4103125	2709070	2781940	4103125	tRNA,transposase	Moraxella_phage(16.67%)	59	NA	NA
WP_003810909.1|2709070_2709487_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_010931061.1|2709597_2710230_+	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
WP_010931062.1|2710258_2710702_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_003810897.1|2710723_2711815_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931063.1|2711869_2712670_-	aldolase	NA	NA	NA	NA	NA
WP_010931064.1|2712805_2713426_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931065.1|2713565_2714039_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|2715178_2716129_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931066.1|2716125_2723787_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
WP_010931067.1|2724027_2728074_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
WP_003816847.1|2728386_2728968_+	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010931068.1|2728964_2730263_+	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010931069.1|2730342_2731371_+	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_076879546.1|2731294_2731645_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931070.1|2731631_2732582_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|2732578_2733529_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931071.1|2733845_2734451_+	fimbrial protein	NA	NA	NA	NA	NA
WP_010931072.1|2734504_2735818_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
WP_003813284.1|2735892_2736363_-	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA	NA
WP_010931073.1|2736362_2737151_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
WP_010931074.1|2737161_2738814_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
WP_010929591.1|2738901_2739852_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931075.1|2741013_2741520_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA	NA
WP_003813293.1|2741516_2742281_-	phenylacetate-CoA oxygenase subunit PaaC	NA	NA	NA	NA	NA
WP_010931076.1|2742296_2742581_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
WP_003813298.1|2742645_2743635_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
WP_010931077.1|2743806_2744736_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
WP_003813302.1|2744707_2745394_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
WP_003813303.1|2745427_2745973_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	2.1e-26
WP_003813306.1|2746017_2747283_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_003813309.1|2747279_2748182_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA	NA
WP_019247679.1|2749363_2750308_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931079.1|2750402_2751920_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010931080.1|2751961_2753590_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_003811986.1|2753697_2754579_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931081.1|2757691_2758066_+	endonuclease	NA	F4YXR7	Roseobacter_phage	54.4	2.1e-25
WP_003812004.1|2758090_2758429_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931082.1|2758472_2760107_-	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	36.6	8.3e-87
WP_010931083.1|2760145_2761492_-	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_003812010.1|2761599_2763021_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_010931084.1|2763090_2763675_-	nitroreductase	NA	NA	NA	NA	NA
WP_005012067.1|2763777_2764728_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931085.1|2764862_2765969_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010931086.1|2765979_2767077_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
WP_010931087.1|2767221_2768427_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_010931088.1|2768433_2768955_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
WP_010931089.1|2768951_2769443_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
WP_003819740.1|2769439_2769691_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
WP_003819741.1|2769671_2770157_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
WP_010931090.1|2770292_2773754_+	DUF748 domain-containing protein	NA	NA	NA	NA	NA
WP_076879578.1|2773750_2774656_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
WP_010931092.1|2774665_2775097_-	lipoprotein	NA	NA	NA	NA	NA
WP_003809348.1|2775343_2775847_+	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	1.8e-24
WP_023995849.1|2775858_2777325_+	MFS transporter	NA	NA	NA	NA	NA
WP_010931095.1|2777399_2778275_-	membrane protein	NA	NA	NA	NA	NA
WP_023853546.1|2778271_2779279_-	biotin synthase BioB	NA	NA	NA	NA	NA
WP_010931097.1|2779746_2780052_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_003819753.1|2780142_2780733_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930525.1|2780923_2781940_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
>prophage 19
NZ_CP021402	Bordetella pertussis strain H696 chromosome, complete genome	4103125	2785083	2851894	4103125	protease,transposase	uncultured_Mediterranean_phage(28.57%)	49	NA	NA
WP_023995489.1|2785083_2786034_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|2786132_2787083_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931099.1|2787079_2787874_-	N-formylglutamate deformylase	NA	NA	NA	NA	NA
WP_010931100.1|2787905_2788610_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931101.1|2788684_2789485_-	SURF1 family protein	NA	NA	NA	NA	NA
WP_003809276.1|2789481_2789889_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_003819722.1|2789885_2790527_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_019247695.1|2790519_2792541_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010931103.1|2793780_2795112_+	MFS transporter	NA	NA	NA	NA	NA
WP_005012067.1|2795108_2796059_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931105.1|2797765_2798032_-	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_003812839.1|2798739_2799078_+	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_010931107.1|2803631_2804234_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931108.1|2804330_2805620_+	MFS transporter	NA	NA	NA	NA	NA
WP_003812846.1|2805677_2806409_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
WP_010931109.1|2806405_2807209_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
WP_003812851.1|2807205_2808294_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_003820410.1|2808290_2809220_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003812857.1|2809368_2810514_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930800.1|2810535_2811486_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931110.1|2811816_2815638_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_010931111.1|2815794_2816463_-	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_014905522.1|2816467_2818141_-	MCE family protein	NA	NA	NA	NA	NA
WP_003820402.1|2818159_2819479_-	PqiA/YebS family transporter subunit	NA	NA	NA	NA	NA
WP_023995053.1|2819483_2821835_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.2e-164
WP_010931115.1|2821854_2824023_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
WP_010931116.1|2824019_2829209_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
WP_003820400.1|2829298_2829613_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
WP_003812875.1|2829840_2830086_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
WP_003820399.1|2830180_2830699_+	hypothetical protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
WP_010931117.1|2830798_2832004_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_019247560.1|2832119_2833517_-	chloride channel protein	NA	NA	NA	NA	NA
WP_010931119.1|2833633_2834212_-	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
WP_010931120.1|2834284_2835676_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
WP_005012067.1|2835843_2836794_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003812889.1|2837074_2837695_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_010931122.1|2837691_2838105_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_010931123.1|2838101_2839145_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_003812895.1|2839200_2839389_+	Trm112 family protein	NA	NA	NA	NA	NA
WP_010931124.1|2839398_2840163_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_010931125.1|2840253_2840910_+	adenylate kinase	NA	NA	NA	NA	NA
WP_010931126.1|2841001_2841760_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010931127.1|2841785_2843387_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
WP_010931128.1|2843587_2844592_+	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
WP_003812908.1|2844692_2844956_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_010931129.1|2845073_2845850_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
WP_005012067.1|2846440_2847391_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931130.1|2849774_2850887_-	Ldh family oxidoreductase	NA	NA	NA	NA	NA
WP_005012808.1|2850943_2851894_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
NZ_CP021402	Bordetella pertussis strain H696 chromosome, complete genome	4103125	2882280	2976317	4103125	transposase	Bacillus_virus(27.27%)	90	NA	NA
WP_005012067.1|2882280_2883231_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879632.1|2883217_2883463_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023852715.1|2883351_2884248_-	inositol monophosphatase	NA	NA	NA	NA	NA
WP_003814547.1|2886525_2888751_+	glycoside hydrolase family 31 protein	NA	NA	NA	NA	NA
WP_003814544.1|2888915_2890004_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
WP_019247918.1|2889960_2890614_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931144.1|2890661_2891459_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010930176.1|2891990_2892941_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994659.1|2893021_2894170_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_005012067.1|2894226_2895177_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879633.1|2895163_2895382_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814535.1|2895275_2895581_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_003820797.1|2895609_2896044_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_010931147.1|2896045_2897290_-	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003820799.1|2897286_2897997_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_033446288.1|2898011_2898923_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_005012808.1|2899292_2900243_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931149.1|2900334_2900739_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247890.1|2900735_2901194_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247891.1|2901200_2902109_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931150.1|2902105_2902972_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_003814524.1|2902958_2903786_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_003820806.1|2903796_2904924_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
WP_023852748.1|2906001_2907240_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931152.1|2907281_2908544_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_010931153.1|2908550_2909303_+	DNA-binding protein	NA	NA	NA	NA	NA
WP_019248355.1|2909354_2909540_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003820813.1|2909815_2910280_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_003820814.1|2910311_2910971_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_010931154.1|2911115_2913224_+	AsmA family protein	NA	NA	NA	NA	NA
WP_023852714.1|2913220_2914171_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931155.1|2914274_2914895_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003820818.1|2914998_2915739_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_019248356.1|2916873_2917998_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247402.1|2918043_2918412_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2918653_2919604_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_019247492.1|2920639_2921182_-	hypothetical protein	NA	NA	NA	NA	NA
WP_124740747.1|2921374_2921581_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|2921567_2922518_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023997028.1|2922514_2923480_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815281.1|2923549_2924386_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
WP_076879583.1|2924862_2926008_+	porin	NA	NA	NA	NA	NA
WP_005012067.1|2926069_2927020_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931159.1|2927212_2927995_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931160.1|2928008_2928758_-	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	26.4	1.2e-11
WP_010931161.1|2928785_2930132_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931162.1|2930157_2931087_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003819549.1|2931202_2932108_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931163.1|2932125_2933325_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_010931164.1|2933397_2934090_-	HD domain-containing protein	NA	A0A1D6Y7U0	Golden_Marseillevirus	29.9	4.7e-07
WP_010931165.1|2934138_2936565_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	33.8	1.2e-86
WP_023853143.1|2936609_2937560_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003809026.1|2937776_2938145_-	DUF861 domain-containing protein	NA	NA	NA	NA	NA
WP_003809025.1|2938431_2939358_+	VOC family protein	NA	NA	NA	NA	NA
WP_010931167.1|2939401_2940412_+	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
WP_010931168.1|2940408_2940843_+	PaaI family thioesterase	NA	NA	NA	NA	NA
WP_010931169.1|2941968_2942757_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.0	1.1e-33
WP_010931170.1|2942766_2943549_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931171.1|2943552_2944644_-	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
WP_010931172.1|2944749_2946225_+	acyl--CoA ligase	NA	Q75ZG1	Hepacivirus	25.6	3.0e-35
WP_010931173.1|2946366_2946915_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003809010.1|2946930_2947392_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931174.1|2947492_2948482_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010931175.1|2948780_2949482_+	riboflavin synthase	NA	NA	NA	NA	NA
WP_010931176.1|2949520_2950894_-	amidase	NA	NA	NA	NA	NA
WP_023997744.1|2950932_2952219_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931177.1|2953105_2954008_+	transcriptional regulator GcvA	NA	NA	NA	NA	NA
WP_010931178.1|2953955_2955176_-	MFS transporter	NA	NA	NA	NA	NA
WP_010931179.1|2955172_2955682_-	nucleoside deaminase	NA	NA	NA	NA	NA
WP_010926062.1|2955671_2956367_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_010931181.1|2956437_2957307_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010930208.1|2957656_2958607_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486089.1|2959467_2960157_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.8	4.8e-12
WP_003818691.1|2960933_2961896_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_014486091.1|2961899_2962760_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003808978.1|2962753_2963146_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486092.1|2963176_2964349_-	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	39.6	1.1e-59
WP_014486094.1|2965800_2966598_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_014486095.1|2966631_2967411_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486096.1|2967439_2968312_-	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_003818698.1|2968333_2969083_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.5	6.2e-29
WP_014486097.1|2969090_2969948_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_019247597.1|2969988_2970552_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_019247598.1|2970582_2970879_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486098.1|2970959_2971763_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_003818702.1|2971783_2972980_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247599.1|2972982_2973984_-	amidase	NA	NA	NA	NA	NA
WP_019249309.1|2974336_2974507_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014486100.1|2974601_2975264_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|2975366_2976317_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
NZ_CP021402	Bordetella pertussis strain H696 chromosome, complete genome	4103125	3306964	3360705	4103125	transposase	Staphylococcus_phage(33.33%)	50	NA	NA
WP_023995489.1|3306964_3307915_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931336.1|3308319_3308964_-	urease accessory protein UreG	NA	NA	NA	NA	NA
WP_019247677.1|3308988_3309573_-	urease accessory protein UreF	NA	NA	NA	NA	NA
WP_014905506.1|3309673_3310291_-	urease accessory protein UreE	NA	NA	NA	NA	NA
WP_010931337.1|3310293_3312009_-	urease subunit alpha	NA	NA	NA	NA	NA
WP_010931338.1|3312005_3312314_-	urease subunit beta	NA	NA	NA	NA	NA
WP_015040527.1|3312330_3312966_-	HupE/UreJ family protein	NA	NA	NA	NA	NA
WP_010931340.1|3312992_3313295_-	urease subunit gamma	NA	NA	NA	NA	NA
WP_003814832.1|3313395_3314250_-	urease accessory protein UreD	NA	NA	NA	NA	NA
WP_124740609.1|3314437_3314662_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929281.1|3314831_3315104_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_010929282.1|3315521_3315929_-	GFA family protein	NA	NA	NA	NA	NA
WP_010931341.1|3316298_3317093_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010927102.1|3317193_3318429_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_003814852.1|3318497_3319514_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_029443830.1|3319510_3320902_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
WP_003814856.1|3320898_3322095_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814858.1|3322091_3323630_-	SpoVR family protein	NA	NA	NA	NA	NA
WP_010931343.1|3323626_3324886_-	YeaH/YhbH family protein	NA	NA	NA	NA	NA
WP_005012067.1|3326826_3327777_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_153302791.1|3327763_3327940_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931344.1|3328543_3329638_-	CoA transferase	NA	NA	NA	NA	NA
WP_019247312.1|3329630_3330965_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_003808193.1|3330918_3331602_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003808195.1|3331627_3332791_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_004566224.1|3332787_3333789_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931346.1|3333788_3334661_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_010931347.1|3334657_3335407_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
WP_010931348.1|3335403_3336195_-	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
WP_010931349.1|3336191_3337331_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_033446332.1|3337639_3338392_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014486103.1|3338425_3339208_+	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010931351.1|3339211_3339601_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931352.1|3340740_3341604_+	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931353.1|3341639_3342728_+	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_010931070.1|3342724_3343675_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_080501793.1|3343661_3344075_-	hypothetical protein	NA	NA	NA	NA	NA
WP_019247959.1|3344028_3347007_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003818344.1|3347933_3348812_+	fatty acid desaturase	NA	NA	NA	NA	NA
WP_005013747.1|3350760_3351711_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931354.1|3351707_3352175_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
WP_010931355.1|3352217_3352988_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_010927090.1|3353008_3353809_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_010931356.1|3353819_3355229_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA	NA
WP_003814739.1|3355323_3356109_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_010931561.1|3356348_3357365_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814742.1|3357472_3357865_-	OsmC family protein	NA	NA	NA	NA	NA
WP_010931357.1|3358002_3358683_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
WP_010931358.1|3358687_3359686_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010930179.1|3359754_3360705_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NZ_CP021402	Bordetella pertussis strain H696 chromosome, complete genome	4103125	3366860	3426160	4103125	tRNA,transposase	Acinetobacter_phage(27.27%)	48	NA	NA
WP_003820957.1|3366860_3368624_+|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
WP_010931362.1|3368735_3369614_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_003814250.1|3369726_3370542_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_003814252.1|3370545_3370797_+	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_010929632.1|3370881_3371898_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003814254.1|3372228_3372450_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_019247693.1|3374810_3375728_-	DMT family transporter	NA	NA	NA	NA	NA
WP_019247692.1|3376225_3377434_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931365.1|3377513_3379085_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814275.1|3379202_3380138_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_003814277.1|3380326_3381271_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
WP_003814281.1|3381339_3381555_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814283.1|3381838_3387556_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
WP_010931367.1|3387561_3388689_+	aminodeoxychorismate synthase component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
WP_003814287.1|3388744_3389371_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010931363.1|3389642_3390659_+|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_010927020.1|3390754_3391465_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010931368.1|3391461_3392451_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_023852728.1|3392582_3394178_+	AMP-binding protein	NA	NA	NA	NA	NA
WP_010931370.1|3394180_3394918_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247745.1|3395073_3395946_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_003814298.1|3396214_3397435_+	MFS transporter	NA	NA	NA	NA	NA
WP_003814300.1|3397431_3398091_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
WP_003814302.1|3398162_3398795_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_010931372.1|3398824_3399343_+	flavin reductase family protein	NA	NA	NA	NA	NA
WP_010931373.1|3399353_3400463_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_003814312.1|3400509_3401364_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
WP_010931374.1|3401365_3402268_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3403490_3404441_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077069207.1|3406197_3407187_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931375.1|3407362_3408151_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
WP_003817833.1|3408147_3409179_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
WP_003815390.1|3409197_3409761_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
WP_010931376.1|3409816_3411337_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
WP_010931377.1|3411600_3412305_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
WP_003815384.1|3412312_3413050_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_003815381.1|3413155_3413530_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_003815379.1|3413572_3414862_+	murein transglycosylase A	NA	NA	NA	NA	NA
WP_010931378.1|3414858_3416028_+	UbiH/UbiF family hydroxylase	NA	NA	NA	NA	NA
WP_010931379.1|3416024_3416864_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
WP_010931380.1|3416923_3417859_+	D-2-hydroxyacid dehydrogenase family protein	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
WP_005012067.1|3417871_3418822_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931381.1|3418920_3419883_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
WP_003817821.1|3419914_3420274_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_010931382.1|3420398_3421301_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
WP_010931383.1|3421302_3423075_-	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_003815367.1|3423109_3423886_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_005012808.1|3425209_3426160_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
NZ_CP021402	Bordetella pertussis strain H696 chromosome, complete genome	4103125	3441098	3499171	4103125	tRNA,transposase	Planktothrix_phage(12.5%)	47	NA	NA
WP_005012808.1|3441098_3442049_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931392.1|3442177_3443311_-	M20 family metallopeptidase	NA	NA	NA	NA	NA
WP_010931393.1|3443354_3444260_-	hydrolase	NA	NA	NA	NA	NA
WP_023852622.1|3444262_3445963_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
WP_010931394.1|3445959_3446880_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_003817805.1|3446887_3447865_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931395.1|3447923_3448958_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003815317.1|3450932_3451169_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931396.1|3451295_3452159_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_003815315.1|3452247_3453069_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_003815313.1|3453148_3453886_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010931397.1|3453882_3454875_-	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_003817794.1|3454988_3455651_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010931399.1|3455695_3456844_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_077069208.1|3459167_3460118_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_014486105.1|3460458_3461409_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|3461507_3462458_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_029443756.1|3462754_3463252_+	cupredoxin family protein	NA	NA	NA	NA	NA
WP_010931403.1|3463294_3465070_+	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
WP_076879643.1|3465116_3465944_+	copper resistance protein B	NA	NA	NA	NA	NA
WP_019249391.1|3465950_3466685_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010931406.1|3467854_3468649_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815296.1|3468938_3469529_+	cysteine dioxygenase	NA	NA	NA	NA	NA
WP_010931407.1|3469562_3470891_-	amidase	NA	NA	NA	NA	NA
WP_010931408.1|3470965_3472111_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014905478.1|3472222_3473221_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446233.1|3473183_3473618_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
WP_010929974.1|3475134_3476019_+	DMT family transporter	NA	NA	NA	NA	NA
WP_010929973.1|3476015_3477221_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
WP_010929972.1|3477217_3478078_-	endonuclease	NA	NA	NA	NA	NA
WP_003807038.1|3478190_3479981_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
WP_003807035.1|3480021_3480687_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	6.7e-11
WP_010929971.1|3480687_3480996_-	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929970.1|3481161_3482448_-	membrane protein	NA	NA	NA	NA	NA
WP_010929969.1|3483881_3484832_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929968.1|3486783_3487998_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_003815171.1|3488103_3489093_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
WP_003815172.1|3489089_3489698_+	HAD-IIIA family hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
WP_010929967.1|3489710_3490340_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_003815175.1|3490336_3490957_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_003815177.1|3490988_3491780_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
WP_003815179.1|3492622_3493087_+	PTS transporter subunit EIIA	NA	NA	NA	NA	NA
WP_010929965.1|3493105_3494032_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
WP_010929964.1|3494085_3495372_-	cytochrome c	NA	NA	NA	NA	NA
WP_003815183.1|3496302_3497175_+	RNase adapter RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
WP_010929963.1|3497171_3498122_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
WP_005012067.1|3498220_3499171_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 25
NZ_CP021402	Bordetella pertussis strain H696 chromosome, complete genome	4103125	3508971	3580312	4103125	tRNA,transposase	Paramecium_bursaria_Chlorella_virus(20.0%)	59	NA	NA
WP_010929957.1|3508971_3510246_-|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
WP_010929956.1|3510968_3511919_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|3512017_3512968_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929955.1|3513066_3515442_-	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_010929954.1|3515461_3516298_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_010929953.1|3516294_3517092_-	citryl-CoA lyase	NA	NA	NA	NA	NA
WP_010929952.1|3517088_3519278_-	acetate--CoA ligase family protein	NA	NA	NA	NA	NA
WP_010929951.1|3519329_3520316_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929950.1|3520397_3522200_-	DNA alkylation response protein	NA	NA	NA	NA	NA
WP_010929949.1|3522457_3524575_+	crotonase	NA	NA	NA	NA	NA
WP_076879537.1|3524571_3525789_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
WP_010929947.1|3525810_3526299_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929946.1|3526448_3528281_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	48.1	4.3e-156
WP_010929945.1|3528478_3529459_-	NAD(P)-dependent oxidoreductase	NA	M1IDV7	Acanthocystis_turfacea_Chlorella_virus	29.5	7.6e-11
WP_010929944.1|3529515_3530535_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003815697.1|3530598_3531492_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929943.1|3531890_3532670_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_010929942.1|3532669_3534811_+	acetate--CoA ligase family protein	NA	NA	NA	NA	NA
WP_010929941.1|3534958_3535903_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929940.1|3535986_3536970_-	oxidoreductase	NA	NA	NA	NA	NA
WP_003815690.1|3537334_3538609_+	NAD(P)-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010929939.1|3538639_3539068_+	RidA family protein	NA	NA	NA	NA	NA
WP_003815682.1|3539078_3539753_+	DUF1028 domain-containing protein	NA	NA	NA	NA	NA
WP_010929938.1|3539745_3540918_+	acetylornithine deacetylase	NA	NA	NA	NA	NA
WP_010929937.1|3541050_3542070_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929936.1|3542250_3543441_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010929935.1|3543454_3544585_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010929934.1|3544628_3546350_-	D-lactate dehydrogenase	NA	NA	NA	NA	NA
WP_003815672.1|3546468_3547431_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815671.1|3547537_3548509_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019247835.1|3549127_3549796_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
WP_003815668.1|3549792_3550200_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
WP_010929577.1|3550196_3551147_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_003814730.1|3553591_3554326_+	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
WP_003814728.1|3554735_3554915_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003814726.1|3555105_3556419_+	short-chain fatty acid transporter	NA	NA	NA	NA	NA
WP_010929786.1|3556434_3557946_-	TAXI family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_010929785.1|3557942_3559148_-	sodium/glutamate symporter	NA	NA	NA	NA	NA
WP_022997984.1|3559343_3560321_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_033446199.1|3560413_3560908_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003814720.1|3561037_3562096_+	glycosyltransferase family 2 protein	NA	I1TED8	Salmonella_phage	40.5	2.8e-59
WP_010927086.1|3562092_3563712_+	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_157734656.1|3563671_3563941_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929784.1|3563899_3565003_+	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
WP_010929783.1|3564999_3565455_+	multidrug/biocide efflux PACE transporter	NA	NA	NA	NA	NA
WP_003814709.1|3565460_3566384_-	alpha/beta fold hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	27.2	4.8e-07
WP_010929782.1|3566473_3567133_-	LysE family translocator	NA	NA	NA	NA	NA
WP_047122777.1|3567129_3568044_-	DMT family transporter	NA	NA	NA	NA	NA
WP_010929577.1|3568132_3569083_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_076879611.1|3569161_3570139_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003807865.1|3570599_3571199_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003807867.1|3571267_3572260_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486054.1|3572309_3573899_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_014486053.1|3573939_3574836_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014486052.1|3574832_3576539_+	thiamine pyrophosphate-requiring protein	NA	NA	NA	NA	NA
WP_003819219.1|3576643_3577885_+	CoA transferase	NA	NA	NA	NA	NA
WP_014486051.1|3577881_3578652_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_014486050.1|3578700_3579402_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_014486049.1|3579328_3580312_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
NZ_CP021402	Bordetella pertussis strain H696 chromosome, complete genome	4103125	3651182	3767901	4103125	protease,tRNA,transposase	Bacillus_phage(12.5%)	105	NA	NA
WP_005013747.1|3651182_3652133_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_153302769.1|3652119_3652269_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003814960.1|3652255_3652984_+	monofunctional biosynthetic peptidoglycan transglycosylase	NA	NA	NA	NA	NA
WP_023852939.1|3652990_3654259_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA	NA
WP_010929738.1|3654255_3655089_+	symmetrical bis(5'-nucleosyl)-tetraphosphatase	NA	NA	NA	NA	NA
WP_010929737.1|3655125_3655866_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_010929736.1|3655985_3657161_-	dihydroorotase	NA	NA	NA	NA	NA
WP_003820560.1|3657157_3658111_-	aspartate carbamoyltransferase catalytic subunit	NA	A7RB08	Paramecium_bursaria_Chlorella_virus	35.8	2.5e-30
WP_010929735.1|3658124_3658526_-	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_019248876.1|3658518_3659196_-	YqgE/AlgH family protein	NA	NA	NA	NA	NA
WP_003814980.1|3659211_3659376_-	rubredoxin	NA	NA	NA	NA	NA
WP_010929734.1|3659492_3660341_+	hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
WP_003814984.1|3660337_3660991_+	thiamine phosphate synthase	NA	NA	NA	NA	NA
WP_010929733.1|3661007_3662291_+	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA	NA
WP_010929732.1|3662530_3664156_+	DUF342 domain-containing protein	NA	NA	NA	NA	NA
WP_003814990.1|3664249_3664651_-	RidA family protein	NA	NA	NA	NA	NA
WP_003814993.1|3664675_3665110_-	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003814996.1|3665111_3666761_-	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	31.2	2.6e-56
WP_010929731.1|3666801_3667971_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_010929730.1|3667973_3668837_-	enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_010929729.1|3672200_3672905_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.2	1.1e-16
WP_003815010.1|3672898_3673693_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	23.5	2.6e-09
WP_003815011.1|3673689_3674655_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815013.1|3674658_3675579_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815015.1|3675675_3676839_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010929728.1|3677061_3677952_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003815019.1|3677955_3678459_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929727.1|3678501_3679500_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930048.1|3679496_3680447_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_111735998.1|3680535_3680823_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154299516.1|3680869_3681028_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005013747.1|3681014_3681965_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_004566083.1|3682024_3682585_+	5'-3'-deoxyribonucleotidase	NA	A0A1E1EUN3	Acanthamoeba_castellanii_mimivirus	30.8	3.2e-14
WP_004566082.1|3684087_3684969_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010929725.1|3685082_3686285_+	MFS transporter	NA	NA	NA	NA	NA
WP_003819105.1|3686413_3688273_-	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
WP_003819104.1|3688350_3689160_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929724.1|3689230_3690232_+	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_003807710.1|3690263_3691124_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_010929723.1|3691323_3692328_+	alpha/beta hydrolase	NA	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	31.5	7.5e-30
WP_003819100.1|3692324_3693911_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003807706.1|3693919_3694846_+	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
WP_003807705.1|3694868_3695495_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_005015810.1|3695593_3696544_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_014906092.1|3696540_3697677_-|protease	trypsin-like serine protease	protease	W5SAB9	Pithovirus	31.2	1.2e-07
WP_010927226.1|3697730_3698507_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_010929721.1|3698531_3698990_-	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_003815815.1|3699129_3699771_+	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_003815816.1|3699835_3701218_+	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_019247426.1|3701237_3702092_+	cytochrome c1	NA	NA	NA	NA	NA
WP_003815819.1|3702250_3702862_+	stringent starvation protein A	NA	NA	NA	NA	NA
WP_003815821.1|3702871_3703321_+|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
WP_010929719.1|3703839_3703980_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010929718.1|3703987_3704149_-	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_077068974.1|3704224_3704440_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3704426_3705377_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929717.1|3706420_3706699_-	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
WP_085964336.1|3707841_3708417_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.4e-28
WP_010929715.1|3708452_3710132_-	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
WP_010929714.1|3710128_3711880_-	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
WP_003817696.1|3711876_3712002_-	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_004567834.1|3712015_3713170_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_010929713.1|3713185_3714805_-	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_010929712.1|3714888_3715434_-	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_005012067.1|3715993_3716944_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929711.1|3717674_3718655_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_010929710.1|3718668_3719793_+	CoA transferase	NA	NA	NA	NA	NA
WP_003814321.1|3719800_3721555_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
WP_010929709.1|3721661_3722561_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814324.1|3722625_3723609_-	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
WP_010929708.1|3723744_3724725_+	AEC family transporter	NA	NA	NA	NA	NA
WP_010929707.1|3724741_3726133_-	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_010929706.1|3726284_3726821_+|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_019247543.1|3726751_3728137_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
WP_003814332.1|3728279_3728918_-	membrane protein	NA	NA	NA	NA	NA
WP_010929705.1|3729004_3730894_+	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
WP_003814337.1|3730890_3731832_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_003814339.1|3731937_3732987_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
WP_010929704.1|3733239_3733941_+	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_010929703.1|3733937_3734636_+	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_010929702.1|3734636_3735992_+	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
WP_010929701.1|3735988_3736480_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_003814351.1|3736498_3737455_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003814355.1|3738865_3740968_-	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
WP_003814356.1|3741138_3742182_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003814358.1|3742225_3742969_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003814363.1|3743990_3744401_-	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
WP_010929700.1|3745350_3746148_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_010930742.1|3746246_3747197_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005013747.1|3747295_3748246_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010927663.1|3748242_3749193_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|3749279_3750230_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929681.1|3750344_3751346_-	HindIII family type II restriction endonuclease	NA	NA	NA	NA	NA
WP_010929682.1|3751436_3752003_-	preprotein translocase subunit SecD	NA	NA	NA	NA	NA
WP_010929683.1|3752321_3754235_+	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA	NA
WP_010929684.1|3754276_3755707_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_019247308.1|3755819_3757232_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_003818947.1|3757248_3757944_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_127796002.1|3757975_3758176_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012808.1|3758162_3759113_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929687.1|3759137_3760037_-	virginiamycin B lyase	NA	NA	NA	NA	NA
WP_010929688.1|3760191_3760740_+	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
WP_010929689.1|3760778_3761498_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
WP_010929690.1|3761569_3764512_+	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
WP_033446404.1|3765105_3767901_+|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
>prophage 27
NZ_CP021402	Bordetella pertussis strain H696 chromosome, complete genome	4103125	3808314	3876138	4103125	tRNA,transposase	Bacillus_phage(22.22%)	60	NA	NA
WP_005012067.1|3808314_3809265_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_077068973.1|3809251_3809431_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003815898.1|3809471_3809948_+	bacterioferritin	NA	NA	NA	NA	NA
WP_010929663.1|3810029_3810713_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003815895.1|3810737_3812345_-	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
WP_010929661.1|3812393_3813023_-	LysE family transporter	NA	NA	NA	NA	NA
WP_029443820.1|3813056_3814439_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.5	5.3e-42
WP_003815889.1|3814769_3815399_+	LemA family protein	NA	NA	NA	NA	NA
WP_010929659.1|3815376_3816279_+	YgcG family protein	NA	NA	NA	NA	NA
WP_005015810.1|3817722_3818673_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929658.1|3819231_3820794_-	ubiquinone biosynthesis regulatory protein kinase UbiB	NA	A0A2N9QVT9	Dishui_lake_phycodnavirus	28.7	1.0e-33
WP_023853232.1|3820790_3821426_-	SCP-2 sterol transfer family protein	NA	NA	NA	NA	NA
WP_010929656.1|3821654_3822677_-	Tim44 domain-containing protein	NA	NA	NA	NA	NA
WP_003815111.1|3822842_3823619_-	bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA	NA	NA	NA	NA
WP_003815113.1|3823782_3824481_+	phosphate regulon transcriptional regulatory protein PhoB	NA	W8CYM9	Bacillus_phage	37.1	8.6e-33
WP_010929655.1|3824492_3825803_+	phosphate regulon sensor histidine kinase PhoR	NA	A0A1V0SGX0	Hokovirus	25.5	6.2e-16
WP_010929654.1|3825858_3826536_+	heavy metal response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.2	1.5e-29
WP_010929653.1|3826532_3827930_+	heavy metal sensor histidine kinase	NA	NA	NA	NA	NA
WP_010929652.1|3828035_3828497_+	DUF411 domain-containing protein	NA	NA	NA	NA	NA
WP_010929651.1|3828580_3829801_+	phosphoglycerate dehydrogenase	NA	A0A1V0SBV6	Catovirus	42.6	3.2e-91
WP_010929650.1|3829851_3830727_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815126.1|3830828_3831260_+	VOC family protein	NA	NA	NA	NA	NA
WP_010929649.1|3831284_3832013_+	5-oxoprolinase subunit PxpB	NA	NA	NA	NA	NA
WP_010929648.1|3832009_3832990_+	biotin-dependent carboxyltransferase	NA	NA	NA	NA	NA
WP_003815135.1|3833756_3834539_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
WP_033446330.1|3834705_3835629_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247545.1|3835700_3836459_+	hypothetical protein	NA	NA	NA	NA	NA
WP_019247546.1|3836477_3836921_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003817676.1|3836941_3837754_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_010929646.1|3837759_3838692_+	alpha/beta hydrolase fold domain-containing protein	NA	NA	NA	NA	NA
WP_010929645.1|3838675_3839899_+	CoA transferase	NA	NA	NA	NA	NA
WP_010929644.1|3839986_3840769_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_019247146.1|3840821_3844784_-	FAD/FMN-binding oxidoreductase	NA	NA	NA	NA	NA
WP_003815155.1|3845530_3847039_+	threonine ammonia-lyase, biosynthetic	NA	NA	NA	NA	NA
WP_153302766.1|3847327_3847471_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005012067.1|3847457_3848408_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929512.1|3849674_3850553_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003815905.1|3850580_3850883_-	bacterioferritin-associated ferredoxin	NA	NA	NA	NA	NA
WP_023853393.1|3850975_3852415_-	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_010929640.1|3852413_3853061_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010929639.1|3853487_3855188_+	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_010929638.1|3855278_3856532_-	amidase	NA	NA	NA	NA	NA
WP_019247800.1|3857425_3857815_+	substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_010929637.1|3857811_3858822_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
WP_003815918.1|3859658_3860492_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_014905488.1|3860488_3861394_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	9.8e-21
WP_005012067.1|3861492_3862443_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929635.1|3862543_3863365_+	phosphodiesterase	NA	NA	NA	NA	NA
WP_010929634.1|3863470_3864511_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
WP_010929633.1|3864553_3865846_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003815927.1|3865856_3866732_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_003815929.1|3866728_3867529_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_010931363.1|3867604_3868621_-|transposase	IS110-like element IS1663 family transposase	transposase	NA	NA	NA	NA
WP_003815930.1|3868903_3869221_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003815933.1|3869311_3869659_-	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
WP_023853376.1|3869946_3871629_+|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_010927242.1|3871638_3872322_+	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_010929628.1|3872383_3873013_+	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
WP_010929627.1|3873094_3874288_-	cystathionine beta-lyase	NA	NA	NA	NA	NA
WP_010929626.1|3875187_3876138_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
NZ_CP021402	Bordetella pertussis strain H696 chromosome, complete genome	4103125	4002193	4067105	4103125	transposase	Planktothrix_phage(40.0%)	60	NA	NA
WP_039249574.1|4002193_4002679_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_153302797.1|4002767_4002905_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010931647.1|4002897_4003878_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_019248461.1|4004144_4004954_+	pertussis toxin ADP-ribosyltransferase subunit PtxA	NA	NA	NA	NA	NA
WP_014906114.1|4004993_4005674_+	pertussis toxin binding subunit PtxB	NA	NA	NA	NA	NA
WP_010929491.1|4005667_4006126_+	pertussis toxin subunit 4	NA	NA	NA	NA	NA
WP_023853616.1|4006137_4006500_+	pertussis toxin binding subunit PtxD	NA	NA	NA	NA	NA
WP_010931651.1|4006582_4007266_+	pertussis toxin binding subunit PtxE	NA	NA	NA	NA	NA
WP_010929493.1|4007321_4007630_+	type IV secretion system protein PtlA	NA	NA	NA	NA	NA
WP_010929494.1|4007648_4007963_+	type IV secretion system protein PtlB	NA	NA	NA	NA	NA
WP_010931652.1|4007959_4010434_+	type IV secretion system protein PtlC	NA	NA	NA	NA	NA
WP_010931653.1|4010441_4011833_+	type IV secretion system protein PtlD	NA	NA	NA	NA	NA
WP_010929497.1|4011829_4012015_+	type IV secretion system protein PtlI	NA	NA	NA	NA	NA
WP_010929498.1|4011993_4012695_+	type IV secretion system peptidoglycanase PtlE	NA	NA	NA	NA	NA
WP_010931654.1|4012691_4013513_+	type IV secretion system protein PtlF	NA	NA	NA	NA	NA
WP_010931655.1|4013493_4014618_+	type IV secretion system protein PtlG	NA	NA	NA	NA	NA
WP_010929500.1|4014610_4015630_+	type IV secretion system protein PtlH	NA	NA	NA	NA	NA
WP_024000452.1|4015835_4016870_-	DMT family transporter	NA	NA	NA	NA	NA
WP_010929501.1|4016970_4017762_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815873.1|4017844_4018219_+	DUF1232 domain-containing protein	NA	NA	NA	NA	NA
WP_010931658.1|4018196_4019606_+	DUF2868 domain-containing protein	NA	NA	NA	NA	NA
WP_003815876.1|4019598_4020981_+	GTPase/DUF3482 domain-containing protein	NA	A0A0R6PHS5	Moraxella_phage	38.9	9.9e-57
WP_003815878.1|4021315_4022920_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_077274089.1|4022955_4023969_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931660.1|4023979_4024906_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_010931661.1|4025296_4026247_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010931662.1|4026416_4027643_+	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA	NA	NA	NA	NA
WP_010931663.1|4027842_4028709_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_003815027.1|4028701_4029664_+	Nudix family hydrolase	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	53.4	1.9e-06
WP_010927663.1|4029764_4030715_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_005012067.1|4030813_4031764_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_010929577.1|4031862_4032813_+|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
WP_023994937.1|4032809_4034303_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_003815032.1|4034299_4037407_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931665.1|4037403_4040472_-	MdtB/MuxB family multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_010931666.1|4040468_4041719_-	MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_003815038.1|4041899_4042661_-	cell division protein ZapD	NA	NA	NA	NA	NA
WP_019247320.1|4042693_4043344_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
WP_003820519.1|4043346_4044186_-	prepilin peptidase	NA	NA	NA	NA	NA
WP_003815047.1|4044426_4045170_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003815049.1|4045252_4045600_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003815051.1|4045697_4046540_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_003815053.1|4046584_4047472_-	segregation/condensation protein A	NA	NA	NA	NA	NA
WP_003815055.1|4047498_4047687_-	DUF3460 family protein	NA	NA	NA	NA	NA
WP_010931669.1|4047784_4049242_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_010931670.1|4049228_4050755_+	glycerol kinase GlpK	NA	NA	NA	NA	NA
WP_003815061.1|4050773_4051241_-	membrane protein	NA	NA	NA	NA	NA
WP_010931671.1|4051240_4052263_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
WP_003815064.1|4052383_4053124_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	4.4e-35
WP_003815066.1|4053178_4054279_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815068.1|4054280_4055471_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_003815070.1|4055590_4056607_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	42.1	1.0e-71
WP_003815073.1|4056925_4057597_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	38.2	9.5e-29
WP_010927126.1|4057593_4058502_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_010931672.1|4058713_4059361_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
WP_010931673.1|4063212_4064289_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_003815084.1|4064299_4065109_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_003815086.1|4065198_4065972_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_023996063.1|4065991_4066168_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010930363.1|4066154_4067105_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
