assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002234455.1_ASM223445v1	NZ_CP022470	Campylobacter jejuni strain jejuni chromosome, complete genome	1	1368656-1368735	1	CRISPRCasFinder	no		DEDDh,WYL,cas2,cas1,cas9,csa3	Orphan	TCTTTTTGTTCTTTTAAAGCTTC	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,cas2,cas1,cas9,csa3	NA,NA|140aa|down_3|NZ_CP022470.1_1371414_1371834_-,NA|374aa|down_5|NZ_CP022470.1_1373188_1374310_-	NA|447aa|up_9|NZ_CP022470.1_1358945_1360286_+	pfam03972, MmgE_PrpD, MmgE/PrpD family	NA|75aa|up_8|NZ_CP022470.1_1360367_1360592_+	COG1918, FeoA, Fe2+ transport system protein A [Inorganic ion transport and metabolism]	NA|614aa|up_7|NZ_CP022470.1_1360588_1362430_+	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism]	NA|498aa|up_6|NZ_CP022470.1_1362426_1363920_-	COG1740, HyaA, Ni,Fe-hydrogenase I small subunit [Energy production and conversion]	NA|275aa|up_5|NZ_CP022470.1_1363923_1364748_-	PRK08415, PRK08415, enoyl-[acyl-carrier-protein] reductase FabI	NA|224aa|up_4|NZ_CP022470.1_1364751_1365423_-	PRK00042, tpiA, triosephosphate isomerase; Provisional	NA|401aa|up_3|NZ_CP022470.1_1365419_1366622_-	PRK00073, pgk, phosphoglycerate kinase; Provisional	NA|333aa|up_2|NZ_CP022470.1_1366624_1367623_-	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism]	NA|182aa|up_1|NZ_CP022470.1_1367682_1368228_+	COG1057, NadD, Nicotinic acid mononucleotide adenylyltransferase [Coenzyme metabolism]	NA|109aa|up_0|NZ_CP022470.1_1368255_1368582_+	COG0799, COG0799, Uncharacterized homolog of plant Iojap protein [Function unknown]	NA|457aa|down_0|NZ_CP022470.1_1369037_1370408_-	cd03089, PMM_PGM, The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e	NA|179aa|down_1|NZ_CP022470.1_1370530_1371067_+	PRK08455, fliL, flagellar basal body-associated protein FliL; Reviewed	NA|116aa|down_2|NZ_CP022470.1_1371066_1371414_+	COG0736, AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) [Lipid metabolism]	NA|140aa|down_3|NZ_CP022470.1_1371414_1371834_-	NA	NA|454aa|down_4|NZ_CP022470.1_1371830_1373192_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|374aa|down_5|NZ_CP022470.1_1373188_1374310_-	NA	NA|395aa|down_6|NZ_CP022470.1_1374382_1375567_-	COG3562, KpsS, Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane]	NA|352aa|down_7|NZ_CP022470.1_1376860_1377916_-	cd08182, HEPD, Hydroxyethylphosphoate dehydrogenase (HEPD) catalyzes the reduction of phosphonoacetaldehyde (PnAA) to hydroxyethylphosphoate (HEP)	NA|399aa|down_8|NZ_CP022470.1_1377908_1379105_-	TIGR03297, Ppyr-DeCO2ase, phosphonopyruvate decarboxylase	NA|441aa|down_9|NZ_CP022470.1_1379104_1380427_-	TIGR02320, Phosphoenolpyruvate_phosphomutase, phosphoenolpyruvate mutase
GCF_002234455.1_ASM223445v1	NZ_CP022470	Campylobacter jejuni strain jejuni chromosome, complete genome	2	1473637-1474068	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas9	DEDDh,WYL,cas2,cas1,cas9,csa3	Type II-A, or Type II-C?, Type II-B,Type II-C,Type II-B	GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT,GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT,GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	36,36,36	0	0	NA	NA	NA:NA:NA	6,6,4	6	TypeII-A,orTypeII-C?,TypeII-B,TypeII-C,TypeII-B	DEDDh,WYL,cas2,cas1,cas9,csa3	NA,NA	NA|311aa|up_9|NZ_CP022470.1_1463289_1464222_-	TIGR01583, Formate_dehydrogenase_cytochrome_b556_subunit, formate dehydrogenase, gamma subunit	NA|214aa|up_8|NZ_CP022470.1_1464218_1464860_-	cd16371, DMSOR_beta_like, uncharacterized subfamily of DMSO Reductase beta subunit family	NA|935aa|up_7|NZ_CP022470.1_1464856_1467661_-	cd02752, MopB_Formate-Dh-Na-like, Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a major component of nitrate respiration in bacteria such as in the E	NA|64aa|up_6|NZ_CP022470.1_1467660_1467852_-	PRK09476, napG, quinol dehydrogenase periplasmic component; Provisional	NA|238aa|up_5|NZ_CP022470.1_1467826_1468540_-	COG3381, TorD, Uncharacterized component of anaerobic dehydrogenases [General function prediction only]	NA|383aa|up_4|NZ_CP022470.1_1468843_1469992_-	TIGR01047, carboxynorspermidine_decarboxylase, carboxynorspermidine decarboxylase	NA|514aa|up_3|NZ_CP022470.1_1470115_1471657_+	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism]	NA|74aa|up_2|NZ_CP022470.1_1471658_1471880_+	COG1977, MoaD, Molybdopterin converting factor, small subunit [Coenzyme metabolism]	NA|149aa|up_1|NZ_CP022470.1_1471880_1472327_+	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|397aa|up_0|NZ_CP022470.1_1472330_1473521_+	COG0303, MoeA, Molybdopterin biosynthesis enzyme [Coenzyme metabolism]	cas2|138aa|down_0|NZ_CP022470.1_1474213_1474627_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|297aa|down_1|NZ_CP022470.1_1474637_1475528_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas9|985aa|down_2|NZ_CP022470.1_1475524_1478479_-	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|330aa|down_3|NZ_CP022470.1_1480105_1481095_-	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|202aa|down_4|NZ_CP022470.1_1481155_1481761_+	PRK00081, coaE, dephospho-CoA kinase; Reviewed	NA|250aa|down_5|NZ_CP022470.1_1481757_1482507_+	PRK00450, dapF, diaminopimelate epimerase; Provisional	NA|244aa|down_6|NZ_CP022470.1_1482481_1483213_+	COG2992, Bax, Uncharacterized FlgJ-related protein [General function prediction only]	NA|346aa|down_7|NZ_CP022470.1_1483209_1484247_-	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|150aa|down_8|NZ_CP022470.1_1484311_1484761_-	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|407aa|down_9|NZ_CP022470.1_1484887_1486108_-	PRK03868, PRK03868, glucose-6-phosphate isomerase; Provisional
GCF_002234455.1_ASM223445v1	NZ_CP022471	Campylobacter jejuni strain jejuni plasmid pRM1246_ERRC, complete sequence	1	17321-17519	1	CRISPRCasFinder	no			Orphan	TATTACATTTAAGTCAATTTTATTTGAAAA	30	0	0	NA	NA	NA	2	2	Orphan	DEDDh,WYL,cas2,cas1,cas9,csa3	NA|235aa|up_8|NZ_CP022471.1_10509_11214_-,NA|184aa|up_6|NZ_CP022471.1_12627_13179_-,NA|94aa|up_5|NZ_CP022471.1_13372_13654_+,NA|204aa|up_4|NZ_CP022471.1_13682_14294_+,NA|218aa|up_3|NZ_CP022471.1_14297_14951_+,NA|88aa|up_1|NZ_CP022471.1_16403_16667_+,NA|86aa|up_0|NZ_CP022471.1_16888_17146_-,NA|108aa|down_5|NZ_CP022471.1_20950_21274_-,NA|222aa|down_9|NZ_CP022471.1_25062_25728_+	NA|1933aa|up_9|NZ_CP022471.1_4689_10488_+	COG4646, COG4646, DNA methylase [Transcription / DNA replication, recombination, and repair]	NA|235aa|up_8|NZ_CP022471.1_10509_11214_-	NA	NA|463aa|up_7|NZ_CP022471.1_11239_12628_-	pfam03432, Relaxase, Relaxase/Mobilisation nuclease domain	NA|184aa|up_6|NZ_CP022471.1_12627_13179_-	NA	NA|94aa|up_5|NZ_CP022471.1_13372_13654_+	NA	NA|204aa|up_4|NZ_CP022471.1_13682_14294_+	NA	NA|218aa|up_3|NZ_CP022471.1_14297_14951_+	NA	NA|409aa|up_2|NZ_CP022471.1_15069_16296_+	COG4643, COG4643, Uncharacterized protein conserved in bacteria [Function unknown]	NA|88aa|up_1|NZ_CP022471.1_16403_16667_+	NA	NA|86aa|up_0|NZ_CP022471.1_16888_17146_-	NA	NA|73aa|down_0|NZ_CP022471.1_17637_17856_+	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General    function prediction only]	NA|68aa|down_1|NZ_CP022471.1_17848_18052_+	COG1724, COG1724, Predicted RNA binding protein (dsRBD-like fold), HicA family    [General function prediction only]	NA|598aa|down_2|NZ_CP022471.1_18055_19849_+	cd01125, repA, Hexameric Replicative Helicase RepA	NA|205aa|down_3|NZ_CP022471.1_19971_20586_-	PRK13413, mpi, master DNA invertase Mpi family serine-type recombinase	NA|126aa|down_4|NZ_CP022471.1_20582_20960_-	COG3309, VapD, Uncharacterized virulence-associated protein D [Function unknown]	NA|108aa|down_5|NZ_CP022471.1_20950_21274_-	NA	NA|88aa|down_6|NZ_CP022471.1_21444_21708_+	pfam04956, TrbC, TrbC/VIRB2 family	NA|923aa|down_7|NZ_CP022471.1_21720_24489_+	TIGR00929, CAG_pathogenicity_island_protein_23, type IV secretion/conjugal transfer ATPase, VirB4 family	NA|189aa|down_8|NZ_CP022471.1_24499_25066_+	pfam09669, Phage_pRha, Phage regulatory protein Rha (Phage_pRha)	NA|222aa|down_9|NZ_CP022471.1_25062_25728_+	NA
