The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP022552	Vibrio parahaemolyticus strain MAVP-R chromosome 1, complete sequence	3468665	1095637	1102339	3468665		Staphylococcus_phage(50.0%)	7	NA	NA
WP_005483011.1|1095637_1096777_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	41.7	1.3e-62
WP_017448803.1|1096794_1098045_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	47.9	2.1e-98
WP_005482986.1|1098172_1098622_+	transcriptional regulator NrdR	NA	NA	NA	NA	NA
WP_021449698.1|1098629_1099754_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	36.0	1.4e-48
WP_005483039.1|1099766_1100420_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	37.5	1.6e-33
WP_021449697.1|1100589_1101699_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	39.6	1.5e-63
WP_005440184.1|1101868_1102339_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	49.3	1.7e-32
>prophage 2
NZ_CP022552	Vibrio parahaemolyticus strain MAVP-R chromosome 1, complete sequence	3468665	1878168	1892190	3468665		Vibrio_phage(30.0%)	16	NA	NA
WP_021453797.1|1878168_1878357_-	hypothetical protein	NA	F6LQB8	Bdellovibrio_phage	52.8	8.8e-09
WP_021453095.1|1878686_1879214_-	siphovirus Gp157 family protein	NA	NA	NA	NA	NA
WP_089190025.1|1879206_1882371_-	hypothetical protein	NA	I3PUZ3	Vibrio_phage	33.6	8.7e-24
WP_127463331.1|1882383_1882563_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049874960.1|1883353_1884070_-	helix-turn-helix domain-containing protein	NA	G9L676	Escherichia_phage	37.2	1.4e-22
WP_021453632.1|1884121_1884373_+	hypothetical protein	NA	A0A1I9KFF6	Aeromonas_phage	41.9	2.9e-07
WP_005495415.1|1884392_1884857_+	hypothetical protein	NA	K7PJS5	Enterobacterial_phage	48.0	3.0e-18
WP_005495414.1|1884853_1885072_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021486513.1|1885137_1886091_+	helix-turn-helix domain-containing protein	NA	A0A1V0E831	Vibrio_phage	35.3	3.8e-39
WP_005495410.1|1886087_1886468_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005495408.1|1886460_1887111_+	DUF1367 family protein	NA	K7PKS6	Enterobacteria_phage	36.5	7.0e-21
WP_005495404.1|1887279_1887681_+	recombination protein NinG	NA	A0A2I7S3K0	Vibrio_phage	45.0	3.7e-20
WP_024701098.1|1887717_1888125_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005483162.1|1888347_1888551_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005483265.1|1889457_1889670_+	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	61.2	2.9e-16
WP_005495398.1|1889964_1892190_+	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	31.7	8.2e-61
>prophage 3
NZ_CP022552	Vibrio parahaemolyticus strain MAVP-R chromosome 1, complete sequence	3468665	2842908	2873080	3468665	transposase,integrase	uncultured_virus(25.0%)	16	2842589:2842602	2849561:2849574
2842589:2842602	attL	TCTATTTCTACCCA	NA	NA	NA	NA
WP_029802409.1|2842908_2844312_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_031815662.1|2844311_2846639_+	hypothetical protein	NA	NA	NA	NA	NA
WP_031815661.1|2846653_2848849_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_005484390.1|2848848_2849346_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005484388.1|2849460_2849925_+	thioredoxin-dependent thiol peroxidase	NA	NA	NA	NA	NA
2849561:2849574	attR	TCTATTTCTACCCA	NA	NA	NA	NA
WP_069540904.1|2850028_2851237_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	48.7	1.0e-49
WP_020842384.1|2852371_2853808_-	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_089190235.1|2853826_2855950_-	type I secretion system permease/ATPase	NA	W8CYL7	Bacillus_phage	28.9	1.9e-46
WP_089190234.1|2856026_2858987_-	RTX family hemolysin	NA	NA	NA	NA	NA
WP_029802401.1|2858998_2859511_-	toxin-activating lysine-acyltransferase	NA	NA	NA	NA	NA
WP_161608943.1|2862375_2862585_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029802400.1|2863119_2863488_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029802399.1|2864857_2866684_-	Ig-like domain-containing protein	NA	NA	NA	NA	NA
WP_029804248.1|2869292_2870327_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_031815657.1|2870651_2871572_+|transposase	IS5 family transposase	transposase	A0A1V0E8E1	Vibrio_phage	91.1	5.8e-162
WP_069491689.1|2872039_2873080_+|transposase	IS481 family transposase	transposase	A0A077SLK2	Escherichia_phage	82.7	1.0e-170
>prophage 4
NZ_CP022552	Vibrio parahaemolyticus strain MAVP-R chromosome 1, complete sequence	3468665	3271978	3286763	3468665	tRNA	uncultured_Mediterranean_phage(20.0%)	13	NA	NA
WP_025559473.1|3271978_3273028_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	60.7	4.5e-110
WP_021450025.1|3273927_3274410_-	nicotinamide-nucleotide amidase	NA	B5TK85	Pseudomonas_phage	48.7	2.9e-27
WP_005478546.1|3274494_3277056_+	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	23.7	1.3e-33
WP_005478537.1|3277135_3278125_-	RNA polymerase sigma factor RpoS	NA	F4YCU2	Synechococcus_phage	35.2	6.9e-36
WP_021450027.1|3278205_3279129_-	peptidoglycan DD-metalloendopeptidase family protein	NA	D7RWE0	Brochothrix_phage	35.2	4.1e-06
WP_005455562.1|3279143_3279770_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.1	1.3e-35
WP_021450028.1|3279769_3280546_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	52.4	6.6e-66
WP_021450029.1|3280545_3281589_-|tRNA	tRNA pseudouridine(13) synthase TruD	tRNA	NA	NA	NA	NA
WP_005380896.1|3281635_3282112_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
WP_017449147.1|3282129_3282834_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	A0A2H4UTB4	Bodo_saltans_virus	22.9	1.0e-04
WP_005455577.1|3282835_3283117_-	cell division protein FtsB	NA	NA	NA	NA	NA
WP_005455579.1|3283742_3285044_-	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	59.2	4.2e-134
WP_005455581.1|3285122_3286763_-	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	52.4	4.2e-155
>prophage 1
NZ_CP022553	Vibrio parahaemolyticus strain MAVP-R chromosome 2, complete sequence	1780740	779616	791796	1780740	coat	Vibrio_phage(85.71%)	16	NA	NA
WP_089190220.1|779616_780753_-	assembly protein	NA	O88128	Vibrio_phage	81.6	2.0e-180
WP_089190219.1|780749_781064_-	DUF2523 domain-containing protein	NA	A0A1W6UG81	Vibrio_phage	84.6	3.8e-41
WP_089190218.1|782793_783027_-|coat	phage coat protein	coat	O88142	Vibrio_phage	70.1	6.4e-17
WP_025625076.1|783034_783280_-	single-stranded DNA-binding protein	NA	A0A1W6UH23	Vibrio_phage	76.5	8.5e-28
WP_025625078.1|783291_783627_-	hypothetical protein	NA	R9TNS3	Vibrio_phage	88.3	1.6e-53
WP_025625079.1|783628_784708_-	replication initiation factor domain-containing protein	NA	R9TRC1	Vibrio_phage	89.4	9.7e-193
WP_025509971.1|784839_785016_+	hypothetical protein	NA	Q9MBU8	Vibrio_virus	81.0	7.4e-18
WP_033908147.1|785252_785516_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033908153.1|785713_785974_-	hypothetical protein	NA	NA	NA	NA	NA
WP_089190220.1|786396_787533_-	assembly protein	NA	O88128	Vibrio_phage	81.6	2.0e-180
WP_089190219.1|787529_787844_-	DUF2523 domain-containing protein	NA	A0A1W6UG81	Vibrio_phage	84.6	3.8e-41
WP_089190218.1|789573_789807_-|coat	phage coat protein	coat	O88142	Vibrio_phage	70.1	6.4e-17
WP_025625076.1|789814_790060_-	single-stranded DNA-binding protein	NA	A0A1W6UH23	Vibrio_phage	76.5	8.5e-28
WP_025625078.1|790071_790407_-	hypothetical protein	NA	R9TNS3	Vibrio_phage	88.3	1.6e-53
WP_025625079.1|790408_791488_-	replication initiation factor domain-containing protein	NA	R9TRC1	Vibrio_phage	89.4	9.7e-193
WP_025509971.1|791619_791796_+	hypothetical protein	NA	Q9MBU8	Vibrio_virus	81.0	7.4e-18
