The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP022267	Xanthomonas citri pv. vignicola strain CFBP7112 chromosome, complete genome	5048412	1191069	1267530	5048412	holin,integrase,terminase,protease,tail,portal,transposase,plate,head,capsid	Stenotrophomonas_phage(53.66%)	77	1217817:1217834	1234764:1234781
WP_089141087.1|1191069_1193151_+|holin	phospholipase C, phosphocholine-specific	holin	NA	NA	NA	NA
WP_007968929.1|1195572_1196217_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_089141088.1|1196546_1197845_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_089141089.1|1197912_1198995_+	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_007968935.1|1199208_1199955_+	colicin V biosynthesis protein	NA	NA	NA	NA	NA
WP_089141090.1|1199985_1201452_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	39.7	9.1e-85
WP_089141091.1|1201647_1202484_+	DUF455 domain-containing protein	NA	NA	NA	NA	NA
WP_089141092.1|1204449_1204869_+	hypothetical protein	NA	NA	NA	NA	NA
WP_089094861.1|1205057_1205801_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA	NA
WP_022558435.1|1206201_1206744_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_089141093.1|1206724_1207861_-	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
WP_007973706.1|1208072_1209599_-	exopolyphosphatase	NA	NA	NA	NA	NA
WP_003483747.1|1209771_1211874_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_011050669.1|1211986_1213330_-	phosphate regulon sensor histidine kinase PhoR	NA	W8CYF6	Bacillus_phage	33.3	6.5e-29
WP_003483753.1|1213387_1214077_-	phosphate regulon transcriptional regulatory protein PhoB	NA	W8CYM9	Bacillus_phage	35.7	1.0e-33
WP_089142617.1|1214259_1215906_-	peptidase	NA	NA	NA	NA	NA
WP_089141094.1|1216055_1216364_+	glutaredoxin 3	NA	A0A2L0UZG6	Agrobacterium_phage	43.2	3.6e-07
WP_007968963.1|1216360_1216756_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_089141095.1|1216982_1217990_+	isocitrate dehydrogenase	NA	NA	NA	NA	NA
1217817:1217834	attL	GCGCTGCTGCTGGGCGCG	NA	NA	NA	NA
WP_089141096.1|1218134_1218896_-	hypothetical protein	NA	NA	NA	NA	NA
WP_089141097.1|1219618_1220203_+	hypothetical protein	NA	NA	NA	NA	NA
WP_089142618.1|1220199_1221162_-|integrase	integrase	integrase	V9IQN0	Stenotrophomonas_phage	55.6	2.7e-93
WP_089141098.1|1221386_1221608_-	hypothetical protein	NA	V9IQX6	Stenotrophomonas_phage	57.7	5.7e-15
WP_089141099.1|1221604_1221814_-	hypothetical protein	NA	NA	NA	NA	NA
WP_089141100.1|1221810_1222014_-	hypothetical protein	NA	NA	NA	NA	NA
WP_089142619.1|1222079_1222304_-	hypothetical protein	NA	NA	NA	NA	NA
WP_089141101.1|1222300_1222573_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029221333.1|1222565_1222748_-	hypothetical protein	NA	NA	NA	NA	NA
WP_089142620.1|1222740_1223055_-	hypothetical protein	NA	V9IQL6	Stenotrophomonas_phage	51.4	3.5e-18
WP_089141102.1|1223243_1223516_-	hypothetical protein	NA	NA	NA	NA	NA
WP_089142621.1|1223515_1223788_-	hypothetical protein	NA	NA	NA	NA	NA
WP_031421344.1|1223799_1224018_-	hypothetical protein	NA	NA	NA	NA	NA
WP_089140893.1|1225341_1226428_+|transposase	IS3-like element ISXac2 family transposase	transposase	NA	NA	NA	NA
WP_008572770.1|1228249_1228462_-	hypothetical protein	NA	NA	NA	NA	NA
WP_089141103.1|1228458_1228737_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008572766.1|1228747_1229068_-	hypothetical protein	NA	V9IQW3	Stenotrophomonas_phage	58.7	2.0e-24
WP_008572763.1|1229070_1229328_-	transcriptional regulator	NA	A0A2H4JE67	uncultured_Caudovirales_phage	44.6	6.6e-07
WP_089141104.1|1229398_1229836_+	transcriptional regulator	NA	E5E3P4	Burkholderia_phage	34.0	2.2e-10
WP_089141105.1|1229958_1230402_+	hypothetical protein	NA	NA	NA	NA	NA
WP_089142622.1|1230687_1230996_+	hypothetical protein	NA	NA	NA	NA	NA
WP_089141106.1|1230978_1231965_-	late control protein	NA	V9IQM7	Stenotrophomonas_phage	54.5	1.4e-92
WP_089141107.1|1231961_1232363_-	oxidoreductase	NA	V9IQX3	Stenotrophomonas_phage	62.9	1.2e-39
WP_089141108.1|1232375_1235246_-|tail	phage tail tape measure protein	tail	V9IQL1	Stenotrophomonas_phage	49.4	2.4e-206
1234764:1234781	attR	GCGCTGCTGCTGGGCGCG	NA	NA	NA	NA
WP_005922203.1|1235275_1235389_-|tail	GpE family phage tail protein	tail	A0A0M4R2P3	Salmonella_phage	68.6	4.2e-06
WP_008572745.1|1235397_1235700_-|tail	phage tail assembly protein	tail	V9IQM4	Stenotrophomonas_phage	67.4	2.2e-25
WP_089141109.1|1235745_1236255_-|tail	phage major tail tube protein	tail	V9IQX1	Stenotrophomonas_phage	80.5	3.6e-73
WP_089141110.1|1236284_1237451_-|tail	phage tail protein	tail	E5FFG9	Burkholderia_phage	63.2	3.6e-132
WP_089141111.1|1237462_1237822_-|plate	baseplate assembly protein	plate	V9IQW0	Stenotrophomonas_phage	63.6	7.3e-36
WP_089141112.1|1237818_1238382_-|plate	phage baseplate assembly protein V	plate	Q9ZXL0	Pseudomonas_virus	47.0	2.2e-26
WP_089141113.1|1238525_1239200_-	hypothetical protein	NA	NA	NA	NA	NA
WP_089141114.1|1239201_1239495_-	hypothetical protein	NA	NA	NA	NA	NA
WP_089141115.1|1239572_1241372_-	hypothetical protein	NA	V9IQX0	Stenotrophomonas_phage	38.1	1.5e-81
WP_089141116.1|1241384_1241930_-|tail	phage tail protein I	tail	V9IQK7	Stenotrophomonas_phage	56.6	4.2e-51
WP_089141117.1|1241922_1242813_-|plate	baseplate assembly protein	plate	V9IQV9	Stenotrophomonas_phage	53.4	4.4e-82
WP_089142623.1|1243232_1244312_+	type III secretion system YopJ family effector AvrXv4	NA	NA	NA	NA	NA
WP_089141118.1|1244319_1244769_-	phage virion morphogenesis protein	NA	V9IQH0	Stenotrophomonas_phage	52.7	4.1e-36
WP_089141119.1|1244756_1245176_-|tail	phage tail protein	tail	A0A2H4J906	uncultured_Caudovirales_phage	65.9	1.1e-40
WP_089141120.1|1245172_1245661_-	hypothetical protein	NA	V9IQW8	Stenotrophomonas_phage	53.1	2.6e-28
WP_089141121.1|1245660_1246302_-	lysozyme	NA	V9IQK6	Stenotrophomonas_phage	62.1	2.4e-50
WP_005922189.1|1246298_1246574_-|holin	phage holin family protein	holin	V9IQV8	Stenotrophomonas_phage	59.8	1.3e-21
WP_005929454.1|1246566_1246923_-	membrane protein	NA	V9IQG9	Stenotrophomonas_phage	56.1	3.5e-22
WP_008572714.1|1246927_1247137_-|tail	tail protein	tail	K4PAW7	Burkholderia_phage	58.0	2.0e-14
WP_031421386.1|1247136_1247604_-|head	head completion/stabilization protein	head	V9IQW6	Stenotrophomonas_phage	49.7	4.1e-31
WP_089141122.1|1247704_1248424_-|terminase	terminase	terminase	Q9ZXM2	Pseudomonas_virus	62.5	1.0e-68
WP_089141123.1|1248427_1249447_-|capsid	phage major capsid protein, P2 family	capsid	Q9ZXM3	Pseudomonas_virus	70.0	4.3e-134
WP_089141124.1|1249491_1250334_-|capsid	phage capsid protein	capsid	A0A2H4J928	uncultured_Caudovirales_phage	53.1	2.6e-68
WP_089141125.1|1250455_1252237_+|terminase	terminase	terminase	V9IQL5	Stenotrophomonas_phage	77.0	6.6e-271
WP_089141126.1|1252236_1253250_+|portal	phage portal protein	portal	A0A2H4J922	uncultured_Caudovirales_phage	72.5	1.8e-140
WP_089141127.1|1253275_1253521_+	Com family DNA-binding transcriptional regulator	NA	V9IQK2	Stenotrophomonas_phage	53.8	6.3e-15
WP_089141128.1|1253438_1254158_+	site-specific DNA-methyltransferase	NA	V9IQV5	Stenotrophomonas_phage	76.0	2.1e-103
WP_089141129.1|1256915_1258202_-	Y-family DNA polymerase	NA	I6RSM4	Salmonella_phage	42.2	4.9e-82
WP_089141130.1|1258201_1258681_-	peptidase S24	NA	A0A2H4J538	uncultured_Caudovirales_phage	38.1	3.0e-13
WP_089141131.1|1259100_1259745_+	hypothetical protein	NA	NA	NA	NA	NA
WP_089142624.1|1259820_1261668_+	hypothetical protein	NA	NA	NA	NA	NA
WP_089141132.1|1264106_1265399_+	trigger factor	NA	NA	NA	NA	NA
WP_002806026.1|1265491_1266118_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	57.4	1.0e-56
WP_089141133.1|1266243_1267530_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	59.6	1.5e-136
>prophage 2
NZ_CP022267	Xanthomonas citri pv. vignicola strain CFBP7112 chromosome, complete genome	5048412	2551894	2564710	5048412		Xanthomonas_phage(63.64%)	15	NA	NA
WP_089141597.1|2551894_2554870_-	DUF4158 domain-containing protein	NA	Q1MVP5	Enterobacteria_phage	47.7	1.0e-255
WP_011795797.1|2554874_2555294_-	PIN domain nuclease	NA	NA	NA	NA	NA
WP_011795796.1|2555293_2555533_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011795795.1|2555741_2556665_+	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	48.7	4.8e-39
WP_089141598.1|2557362_2558010_+	conjugal transfer protein	NA	A0A077JBM8	Xanthomonas_phage	91.2	7.5e-108
WP_089141599.1|2558025_2558418_+	DUF4124 domain-containing protein	NA	A0A077JCA3	Xanthomonas_phage	86.2	4.8e-57
WP_089141600.1|2558456_2558795_-	hypothetical protein	NA	Q38057	Xanthomonas_phage	84.8	7.5e-51
WP_089141601.1|2558791_2559028_-	hypothetical protein	NA	A0A077JCZ5	Xanthomonas_phage	83.3	7.9e-07
WP_046833610.1|2558966_2559293_+	hypothetical protein	NA	S0F2N2	Stenotrophomonas_phage	43.9	1.9e-14
WP_046833611.1|2559332_2559719_-	DUF4124 domain-containing protein	NA	A0A077JCA3	Xanthomonas_phage	59.2	4.3e-34
WP_046833612.1|2559754_2560957_-	zonular occludens toxin family protein	NA	B1NI81	Stenotrophomonas_phage	33.3	1.1e-48
WP_046833613.1|2560953_2561280_-	DUF2523 domain-containing protein	NA	NA	NA	NA	NA
WP_046833615.1|2562873_2563128_-	hypothetical protein	NA	NA	NA	NA	NA
WP_089141602.1|2563376_2563673_-	DNA-binding protein	NA	O80282	Xanthomonas_phage	99.0	8.1e-49
WP_089141603.1|2563669_2564710_-	replication initiation protein	NA	A0A077JDC0	Xanthomonas_phage	84.7	6.3e-173
>prophage 3
NZ_CP022267	Xanthomonas citri pv. vignicola strain CFBP7112 chromosome, complete genome	5048412	4118370	4126393	5048412		Escherichia_phage(28.57%)	7	NA	NA
WP_089142177.1|4118370_4119717_+	phosphomannomutase	NA	A0A127AWJ1	Bacillus_phage	26.7	2.0e-33
WP_007962673.1|4119763_4121167_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	29.8	4.2e-47
WP_089095960.1|4121441_4122608_-	nucleotide sugar dehydrogenase	NA	M1HZB2	Paramecium_bursaria_Chlorella_virus	58.4	7.2e-117
WP_007962671.1|4122948_4123848_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.2	4.1e-27
WP_007971517.1|4123844_4124402_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	48.3	3.9e-44
WP_007971516.1|4124398_4125286_-	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	57.4	1.5e-93
WP_089142178.1|4125337_4126393_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	45.6	4.9e-80
