assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002216835.1_ASM221683v1	NZ_CP022349	Klebsiella michiganensis strain K516 plasmid pK516_KPC, complete sequence	1	42987-43155	1	PILER-CR	no			Orphan	ATAATTAAATCATGATTTAATG	22	0	0	NA	NA	NA	2	2	Orphan	csa3,cas3,WYL,DEDDh,DinG,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas14j	NA|88aa|up_7|NZ_CP022349.1_32507_32771_-,NA|173aa|up_0|NZ_CP022349.1_41743_42262_-,NA|76aa|down_1|NZ_CP022349.1_43837_44065_+,NA|77aa|down_5|NZ_CP022349.1_46420_46651_+	NA|204aa|up_9|NZ_CP022349.1_30821_31433_+	pfam11140, DUF2913, Protein of unknown function (DUF2913)	NA|318aa|up_8|NZ_CP022349.1_31429_32383_-	COG5464, COG5464, Uncharacterized conserved protein [Function unknown]	NA|88aa|up_7|NZ_CP022349.1_32507_32771_-	NA	NA|207aa|up_6|NZ_CP022349.1_32790_33411_-	cd03767, SR_Res_par, Serine recombinase (SR) family, Partitioning (par)-Resolvase subfamily, catalytic domain; Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme	NA|478aa|up_5|NZ_CP022349.1_33789_35223_+	PRK10458, PRK10458, DNA cytosine methylase; Provisional	NA|399aa|up_4|NZ_CP022349.1_35257_36454_-	pfam09019, EcoRII-C, EcoRII C terminal	NA|389aa|up_3|NZ_CP022349.1_36507_37673_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|918aa|up_2|NZ_CP022349.1_38035_40789_+	cd07438, PHP_HisPPase_AMP, Polymerase and Histidinol Phosphatase domain of Histidinol phosphate phosphatase (HisPPase) AMP bound	NA|199aa|up_1|NZ_CP022349.1_40894_41491_-	COG1961, PinR, Site-specific recombinases, DNA invertase Pin homologs [DNA replication, recombination, and repair]	NA|173aa|up_0|NZ_CP022349.1_41743_42262_-	NA	NA|209aa|down_0|NZ_CP022349.1_43166_43793_+	cd02042, ParAB_family, partition proteins ParAB family	NA|76aa|down_1|NZ_CP022349.1_43837_44065_+	NA	NA|425aa|down_2|NZ_CP022349.1_44239_45514_-	PRK03609, umuC, translesion error-prone DNA polymerase V subunit UmuC	NA|138aa|down_3|NZ_CP022349.1_45525_45939_-	PRK10276, PRK10276, translesion error-prone DNA polymerase V autoproteolytic subunit	NA|82aa|down_4|NZ_CP022349.1_45971_46217_-	pfam06183, DinI, DinI-like family	NA|77aa|down_5|NZ_CP022349.1_46420_46651_+	NA	NA|208aa|down_6|NZ_CP022349.1_47085_47709_+	PRK13699, PRK13699, putative methylase; Provisional	NA|966aa|down_7|NZ_CP022349.1_47705_50603_-	pfam01526, DDE_Tnp_Tn3, Tn3 transposase DDE domain	NA|202aa|down_8|NZ_CP022349.1_50697_51303_+	smart00857, Resolvase, Resolvase, N terminal domain	NA|394aa|down_9|NZ_CP022349.1_51962_53144_+	PRK09560, nhaA, pH-dependent sodium/proton antiporter; Reviewed
GCF_002216835.1_ASM221683v1	NZ_CP022348	Klebsiella michiganensis strain K516 chromosome, complete genome	1	2377268-2378516	1,1,1	CRT,PILER-CR,CRISPRCasFinder	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	csa3,cas3,WYL,DEDDh,DinG,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas14j	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,29	1	1	2377663-2377694	NZ_CP022348.1_5057097-5057066	I-E:I-E:I-E	20,19,19	20	TypeI-E	csa3,cas3,WYL,DEDDh,DinG,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas14j	NA,NA	NA|350aa|up_9|NZ_CP022348.1_2368211_2369261_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_8|NZ_CP022348.1_2369257_2369737_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_7|NZ_CP022348.1_2369736_2370447_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|106aa|up_6|NZ_CP022348.1_2370466_2370784_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|109aa|up_5|NZ_CP022348.1_2370924_2371251_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_4|NZ_CP022348.1_2371304_2371910_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_3|NZ_CP022348.1_2371909_2373337_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_2|NZ_CP022348.1_2373346_2374255_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|472aa|up_1|NZ_CP022348.1_2374264_2375680_-	PRK10637, cysG, siroheme synthase CysG	NA|352aa|up_0|NZ_CP022348.1_2375918_2376974_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas2|98aa|down_0|NZ_CP022348.1_2378610_2378904_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|307aa|down_1|NZ_CP022348.1_2378903_2379824_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|215aa|down_2|NZ_CP022348.1_2379826_2380471_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|249aa|down_3|NZ_CP022348.1_2380452_2381199_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|353aa|down_4|NZ_CP022348.1_2381208_2382267_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|185aa|down_5|NZ_CP022348.1_2382278_2382833_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|519aa|down_6|NZ_CP022348.1_2382829_2384386_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|887aa|down_7|NZ_CP022348.1_2384397_2387058_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|245aa|down_8|NZ_CP022348.1_2387253_2387988_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|571aa|down_9|NZ_CP022348.1_2388086_2389799_-	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit
GCF_002216835.1_ASM221683v1	NZ_CP022348	Klebsiella michiganensis strain K516 chromosome, complete genome	2	3444770-3444860	2	CRISPRCasFinder	no		csa3,cas3,WYL,DEDDh,DinG,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas14j	Orphan	CCGCCTGCGATCGGGTAGCCCGGA	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,DEDDh,DinG,RT,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas14j	NA,NA	NA|318aa|up_9|NZ_CP022348.1_3435816_3436770_-	PRK09393, ftrA, transcriptional activator FtrA; Provisional	NA|260aa|up_8|NZ_CP022348.1_3436784_3437564_-	COG2220, COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only]	NA|185aa|up_7|NZ_CP022348.1_3437733_3438288_+	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate	NA|287aa|up_6|NZ_CP022348.1_3438279_3439140_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|270aa|up_5|NZ_CP022348.1_3439164_3439974_-	PRK09861, PRK09861, lipoprotein NlpA	NA|157aa|up_4|NZ_CP022348.1_3440229_3440700_-	pfam07080, DUF1348, Protein of unknown function (DUF1348)	NA|207aa|up_3|NZ_CP022348.1_3440830_3441451_-	COG3576, COG3576, Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase [General function prediction only]	NA|305aa|up_2|NZ_CP022348.1_3441553_3442468_+	cd08471, PBP2_CrgA_like_2, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|499aa|up_1|NZ_CP022348.1_3442464_3443961_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|216aa|up_0|NZ_CP022348.1_3444041_3444689_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|139aa|down_0|NZ_CP022348.1_3444904_3445321_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|375aa|down_1|NZ_CP022348.1_3445774_3446899_+	PRK15030, PRK15030, multidrug efflux RND transporter periplasmic adaptor subunit AcrA	NA|1036aa|down_2|NZ_CP022348.1_3446898_3450006_+	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family	NA|455aa|down_3|NZ_CP022348.1_3450009_3451374_+	PRK09837, PRK09837, Cu(I)/Ag(I) efflux RND transporter outer membrane protein	NA|389aa|down_4|NZ_CP022348.1_3451424_3452591_+	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|301aa|down_5|NZ_CP022348.1_3452751_3453654_+	PRK05441, murQ, N-acetylmuramic acid-6-phosphate etherase; Reviewed	NA|478aa|down_6|NZ_CP022348.1_3453678_3455112_+	PRK09586, murP, PTS system N-acetylmuramic acid transporter subunits EIIBC; Reviewed	NA|79aa|down_7|NZ_CP022348.1_3455217_3455454_+	pfam07362, CcdA, Post-segregation antitoxin CcdA	NA|103aa|down_8|NZ_CP022348.1_3455456_3455765_+	pfam01845, CcdB, CcdB protein	NA|294aa|down_9|NZ_CP022348.1_3455936_3456818_+	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter
