assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002216145.1_ASM221614v1	NZ_CP022278	Neisseria chenwenguii strain 10023 chromosome, complete genome	1	1933943-1936442	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas4,cas7,cas8c,cas5,cas3	DEDDh,csa3,DinG,cas2,WYL,cas1,cas4,cas7,cas8c,cas5,cas3	 Type I-U?,Type I-U,Type I-C	GTTTCAATACACAGCCACCCGCGAGGGTGGCTG,GTTTCAATACACAGCCACCCGCGAGGGTGGCTG,GTTTCAATACACAGCCACCCGCGAGGGTGGCTG	33,33,33	1	1	1934044-1934077	NZ_CP022278.1_1531913-1531946	NA:NA:NA	37,37,36	37	TypeI-U?,TypeI-U,TypeI-C	DEDDh,csa3,DinG,cas2,WYL,cas1,cas4,cas7,cas8c,cas5,cas3	NA|67aa|up_8|NZ_CP022278.1_1924849_1925050_-,NA|67aa|up_2|NZ_CP022278.1_1931684_1931885_-,NA	NA|452aa|up_9|NZ_CP022278.1_1923420_1924776_+	PRK15452, PRK15452, putative protease; Provisional	NA|67aa|up_8|NZ_CP022278.1_1924849_1925050_-	NA	NA|246aa|up_7|NZ_CP022278.1_1925603_1926341_+	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]	NA|229aa|up_6|NZ_CP022278.1_1926342_1927029_+	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|305aa|up_5|NZ_CP022278.1_1927117_1928032_+	cd13599, PBP2_lipoprotein_Gna1946, The membrane-associated lipoprotein Gna1946 from Neisseria meningitidis; the type 2 periplasmic binding protein fold	NA|414aa|up_4|NZ_CP022278.1_1928625_1929867_-	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]	NA|509aa|up_3|NZ_CP022278.1_1930110_1931637_+	PRK09224, PRK09224, threonine ammonia-lyase IlvA	NA|67aa|up_2|NZ_CP022278.1_1931684_1931885_-	NA	NA|380aa|up_1|NZ_CP022278.1_1932099_1933239_+	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|194aa|up_0|NZ_CP022278.1_1933235_1933817_+	TIGR02081, conserved_hypothetical_protein, methionine biosynthesis protein MetW	cas2|98aa|down_0|NZ_CP022278.1_1936630_1936924_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|338aa|down_1|NZ_CP022278.1_1937028_1938042_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas4|209aa|down_2|NZ_CP022278.1_1939774_1940401_-	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4	cas7|288aa|down_3|NZ_CP022278.1_1940726_1941590_-	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas8c|615aa|down_4|NZ_CP022278.1_1941600_1943445_-	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas5|226aa|down_5|NZ_CP022278.1_1943441_1944119_-	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	NA|60aa|down_6|NZ_CP022278.1_1944343_1944523_-	TIGR02121, Osmoregulated_proline_transporter, sodium/proline symporter	cas3|763aa|down_7|NZ_CP022278.1_1944606_1946895_-	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	NA|463aa|down_8|NZ_CP022278.1_1947122_1948511_+	TIGR03173, pbuX, xanthine permease	NA|263aa|down_9|NZ_CP022278.1_1948576_1949365_-	cd00553, NAD_synthase, NAD+ synthase is a homodimer, which catalyzes the final step in de novo nicotinamide adenine dinucleotide (NAD+) biosynthesis, an amide transfer from either ammonia or glutamine to nicotinic acid adenine dinucleotide (NaAD)
GCF_002216145.1_ASM221614v1	NZ_CP022278	Neisseria chenwenguii strain 10023 chromosome, complete genome	2	1942474-1942582	2	CRISPRCasFinder	no	cas2,cas1,cas4,cas7,cas8c,cas5,cas3	DEDDh,csa3,DinG,cas2,WYL,cas1,cas4,cas7,cas8c,cas5,cas3	 Type I-U?,Type I-U,Type I-C	GGTCATTATCGTGGCGAAAAAATCTTCCGCCGCTTCG	37	0	0	NA	NA	NA	1	1	TypeI-U?,TypeI-U,TypeI-C	DEDDh,csa3,DinG,cas2,WYL,cas1,cas4,cas7,cas8c,cas5,cas3	NA|67aa|up_6|NZ_CP022278.1_1931684_1931885_-,NA|71aa|down_8|NZ_CP022278.1_1953018_1953231_+	NA|305aa|up_9|NZ_CP022278.1_1927117_1928032_+	cd13599, PBP2_lipoprotein_Gna1946, The membrane-associated lipoprotein Gna1946 from Neisseria meningitidis; the type 2 periplasmic binding protein fold	NA|414aa|up_8|NZ_CP022278.1_1928625_1929867_-	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]	NA|509aa|up_7|NZ_CP022278.1_1930110_1931637_+	PRK09224, PRK09224, threonine ammonia-lyase IlvA	NA|67aa|up_6|NZ_CP022278.1_1931684_1931885_-	NA	NA|380aa|up_5|NZ_CP022278.1_1932099_1933239_+	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|194aa|up_4|NZ_CP022278.1_1933235_1933817_+	TIGR02081, conserved_hypothetical_protein, methionine biosynthesis protein MetW	cas2|98aa|up_3|NZ_CP022278.1_1936630_1936924_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|338aa|up_2|NZ_CP022278.1_1937028_1938042_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas4|209aa|up_1|NZ_CP022278.1_1939774_1940401_-	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4	cas7|288aa|up_0|NZ_CP022278.1_1940726_1941590_-	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas5|226aa|down_0|NZ_CP022278.1_1943441_1944119_-	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	NA|60aa|down_1|NZ_CP022278.1_1944343_1944523_-	TIGR02121, Osmoregulated_proline_transporter, sodium/proline symporter	cas3|763aa|down_2|NZ_CP022278.1_1944606_1946895_-	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	NA|463aa|down_3|NZ_CP022278.1_1947122_1948511_+	TIGR03173, pbuX, xanthine permease	NA|263aa|down_4|NZ_CP022278.1_1948576_1949365_-	cd00553, NAD_synthase, NAD+ synthase is a homodimer, which catalyzes the final step in de novo nicotinamide adenine dinucleotide (NAD+) biosynthesis, an amide transfer from either ammonia or glutamine to nicotinic acid adenine dinucleotide (NaAD)	NA|147aa|down_5|NZ_CP022278.1_1949896_1950337_-	COG5005, COG5005, Mu-like prophage protein gpG [General function prediction only]	NA|302aa|down_6|NZ_CP022278.1_1950523_1951429_-	COG2369, COG2369, Uncharacterized protein, homolog of phage Mu protein gp30 [Function unknown]	NA|502aa|down_7|NZ_CP022278.1_1951425_1952931_-	pfam06074, DUF935, Protein of unknown function (DUF935)	NA|71aa|down_8|NZ_CP022278.1_1953018_1953231_+	NA	NA|496aa|down_9|NZ_CP022278.1_1953213_1954701_-	COG4373, COG4373, Mu-like prophage FluMu protein gp28 [General function prediction only]
GCF_002216145.1_ASM221614v1	NZ_CP022278	Neisseria chenwenguii strain 10023 chromosome, complete genome	3	2424308-2424399	3	CRISPRCasFinder	no		DEDDh,csa3,DinG,cas2,WYL,cas1,cas4,cas7,cas8c,cas5,cas3	Orphan	CGAGCCGGCGGTAGTGCCCGAAG	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,DinG,cas2,WYL,cas1,cas4,cas7,cas8c,cas5,cas3	NA,NA|158aa|down_3|NZ_CP022278.1_2429338_2429812_-,NA|154aa|down_6|NZ_CP022278.1_2430913_2431375_-,NA|80aa|down_7|NZ_CP022278.1_2431371_2431611_-,NA|68aa|down_8|NZ_CP022278.1_2431704_2431908_+	NA|255aa|up_9|NZ_CP022278.1_2413384_2414149_+	PRK10575, PRK10575, Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC	NA|293aa|up_8|NZ_CP022278.1_2414159_2415038_+	cd01146, FhuD, Fe3+-siderophore binding domain FhuD	NA|655aa|up_7|NZ_CP022278.1_2415031_2416996_+	PRK10577, PRK10577, Fe(3+)-hydroxamate ABC transporter permease FhuB	NA|134aa|up_6|NZ_CP022278.1_2417145_2417547_-	COG1188, COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]	NA|320aa|up_5|NZ_CP022278.1_2417762_2418722_+	PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated	NA|444aa|up_4|NZ_CP022278.1_2419053_2420385_+	PRK10660, tilS, tRNA(Ile)-lysidine synthetase; Provisional	NA|200aa|up_3|NZ_CP022278.1_2420455_2421055_+	TIGR02939, Sigma_factor_ECF_subfamily, RNA polymerase sigma factor RpoE	NA|190aa|up_2|NZ_CP022278.1_2421058_2421628_+	cd16328, RseA_N, N-terminal domain of RseA	NA|121aa|up_1|NZ_CP022278.1_2421745_2422108_-	PRK14196, PRK14196, fluoride efflux transporter CrcB	NA|227aa|up_0|NZ_CP022278.1_2422207_2422888_-	COG3235, COG3235, Predicted membrane protein [Function unknown]	NA|194aa|down_0|NZ_CP022278.1_2426223_2426805_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|344aa|down_1|NZ_CP022278.1_2427036_2428068_+	COG1613, Sbp, ABC-type sulfate transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|348aa|down_2|NZ_CP022278.1_2428247_2429291_+	COG1613, Sbp, ABC-type sulfate transport system, periplasmic component [Inorganic ion transport and metabolism]	NA|158aa|down_3|NZ_CP022278.1_2429338_2429812_-	NA	NA|79aa|down_4|NZ_CP022278.1_2429872_2430109_-	COG3419, PilY1, Tfp pilus assembly protein, tip-associated adhesin PilY1 [Cell motility and secretion / Intracellular trafficking and secretion]	NA|139aa|down_5|NZ_CP022278.1_2430109_2430526_-	COG3419, PilY1, Tfp pilus assembly protein, tip-associated adhesin PilY1 [Cell motility and secretion / Intracellular trafficking and secretion]	NA|154aa|down_6|NZ_CP022278.1_2430913_2431375_-	NA	NA|80aa|down_7|NZ_CP022278.1_2431371_2431611_-	NA	NA|68aa|down_8|NZ_CP022278.1_2431704_2431908_+	NA	NA|353aa|down_9|NZ_CP022278.1_2432091_2433150_+	PRK02406, PRK02406, DNA polymerase IV; Validated
