The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP022272	Shewanella marisflavi strain EP1 chromosome, complete genome	4321452	2109221	2120277	4321452	tRNA	uncultured_Caudovirales_phage(37.5%)	12	NA	NA
WP_088904597.1|2109221_2111732_+	DUF87 domain-containing protein	NA	A0A218M9A2	Mycobacterium_phage	49.1	2.0e-84
WP_088904598.1|2111777_2112404_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_088904599.1|2112412_2113744_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	37.4	3.9e-74
WP_011865819.1|2113736_2114111_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	36.8	1.3e-08
WP_033538168.1|2114130_2115417_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	44.3	1.5e-94
WP_088904601.1|2115632_2115971_-	TusE/DsrC/DsvC family sulfur relay protein	NA	NA	NA	NA	NA
WP_088904602.1|2115964_2116246_-	sulfurtransferase complex subunit TusB	NA	NA	NA	NA	NA
WP_088904603.1|2116245_2116602_-	sulfurtransferase complex subunit TusC	NA	A0A2H4J8C0	uncultured_Caudovirales_phage	28.7	3.4e-09
WP_033538172.1|2116610_2117000_-	sulfurtransferase complex subunit TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	45.1	5.5e-21
WP_033538173.1|2117176_2117836_-	Bax inhibitor-1/YccA family protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	40.3	1.8e-32
WP_088904604.1|2117991_2118894_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_088904605.1|2119014_2120277_+	Bcr/CflA family multidrug efflux MFS transporter	NA	S4TR35	Salmonella_phage	25.1	1.7e-15
>prophage 2
NZ_CP022272	Shewanella marisflavi strain EP1 chromosome, complete genome	4321452	2799329	2807534	4321452	transposase	Shigella_phage(16.67%)	7	NA	NA
WP_088903906.1|2799329_2800503_+|transposase	IS3 family transposase	transposase	Q716C2	Shigella_phage	68.2	1.5e-122
WP_157704993.1|2800448_2800760_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088904991.1|2801273_2802443_+	DUF3596 domain-containing protein	NA	A0A1W6JTA0	Pseudomonas_phage	28.9	2.5e-29
WP_088904992.1|2802699_2803011_-	hypothetical protein	NA	A0A1D7XFC1	Escherichia_phage	53.1	1.8e-11
WP_088904993.1|2803124_2804009_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	45.9	1.4e-56
WP_088904994.1|2804071_2806018_-	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	27.6	3.7e-17
WP_088904995.1|2806367_2807534_-	nucleotide sugar dehydrogenase	NA	O41091	Paramecium_bursaria_Chlorella_virus	54.9	2.3e-115
>prophage 3
NZ_CP022272	Shewanella marisflavi strain EP1 chromosome, complete genome	4321452	2994470	3005310	4321452	tRNA	uncultured_Mediterranean_phage(33.33%)	8	NA	NA
WP_088905115.1|2994470_2997095_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.2	1.6e-79
WP_081953784.1|2997286_2997736_-	recombination regulator RecX	NA	NA	NA	NA	NA
WP_033538570.1|2997764_2998826_-	recombinase RecA	NA	A0A2D1GPX2	Mycobacterium_phage	61.9	1.1e-111
WP_088905116.1|2999158_3001726_+	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	22.2	2.2e-33
WP_033538572.1|3001908_3002883_-	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	36.9	1.1e-33
WP_088905956.1|3002961_3003873_-	peptidoglycan DD-metalloendopeptidase family protein	NA	NA	NA	NA	NA
WP_033538573.1|3003928_3004564_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	51.2	2.2e-35
WP_033538645.1|3004560_3005310_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	52.7	1.6e-69
>prophage 4
NZ_CP022272	Shewanella marisflavi strain EP1 chromosome, complete genome	4321452	3026384	3035524	4321452		Staphylococcus_phage(42.86%)	8	NA	NA
WP_033538591.1|3026384_3026861_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	47.0	1.8e-29
WP_033538592.1|3026984_3028088_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	38.9	4.6e-65
WP_088905129.1|3028170_3028836_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	32.3	6.3e-25
WP_088905130.1|3028838_3029990_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	34.4	6.1e-52
WP_033538595.1|3030044_3030515_-	transcriptional regulator NrdR	NA	NA	NA	NA	NA
WP_033538596.1|3030640_3031894_-	serine hydroxymethyltransferase	NA	A0A219Y950	Aeromonas_phage	54.9	2.4e-102
WP_088905131.1|3032510_3034175_+	energy-dependent translational throttle protein EttA	NA	A0A1V0SKJ1	Klosneuvirus	27.2	1.0e-39
WP_088905132.1|3034405_3035524_+	metallophosphoesterase	NA	A0A1V0SLL4	Klosneuvirus	26.0	7.1e-13
