The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP018311	Vibrio rotiferianus strain B64D1 chromosome 1, complete sequence	1951588	122927	155424	1951588	integrase,tail,plate,capsid,terminase,head,portal	Vibrio_phage(31.25%)	41	121487:121500	153497:153510
121487:121500	attL	GTCAATTCTGCCAA	NA	NA	NA	NA
WP_088879196.1|122927_123983_+|integrase	site-specific integrase	integrase	A0A1D9C9R5	Salinivibrio_phage	59.6	3.5e-118
WP_167381294.1|124013_124484_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088879197.1|124679_125096_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088879198.1|125095_126403_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088879199.1|126656_127385_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088879200.1|127712_129599_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_088879201.1|129656_130547_-	transcriptional regulator	NA	M4MB93	Vibrio_phage	34.2	2.8e-12
WP_088879202.1|130718_131006_+	hypothetical protein	NA	A0A1D9C9N7	Salinivibrio_phage	40.9	9.0e-13
WP_088879203.1|131229_131778_+	transcriptional regulator	NA	A0A2I7RNI1	Vibrio_phage	47.8	1.4e-38
WP_088879204.1|131798_132215_+	hypothetical protein	NA	A0A2I7RNG1	Vibrio_phage	61.4	9.6e-40
WP_088879205.1|132217_132430_+	hypothetical protein	NA	A0A2I7RNH0	Vibrio_phage	61.4	8.7e-13
WP_088879206.1|132429_132657_+	hypothetical protein	NA	R9TPY7	Vibrio_phage	48.7	2.1e-12
WP_088879207.1|132653_132932_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088879208.1|133397_135314_+	replication endonuclease	NA	Q6K1F3	Salmonella_virus	36.6	1.9e-58
WP_088879209.1|135405_135651_+	ogr/Delta-like zinc finger family protein	NA	NA	NA	NA	NA
WP_088879210.1|135747_136416_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088879211.1|137882_138815_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_088879212.1|138814_139420_+|plate	baseplate assembly protein	plate	NA	NA	NA	NA
WP_088879213.1|139416_139803_+	hypothetical protein	NA	B5TK74	Pseudomonas_phage	30.4	5.3e-08
WP_088879214.1|139799_140846_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088879215.1|140827_141379_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088879216.1|141378_142191_+	hypothetical protein	NA	E5E3Q7	Burkholderia_phage	29.7	4.7e-06
WP_088879217.1|142187_142640_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088879218.1|142644_142992_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088879219.1|143131_143374_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088879220.1|143370_143907_+	lysozyme	NA	E5G6N1	Salmonella_phage	43.7	8.3e-28
WP_088879221.1|143909_144416_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088879222.1|144922_145891_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088879223.1|146141_147110_-|portal	phage portal protein	portal	A0A2I8TV74	Erwinia_phage	41.2	7.0e-57
WP_088879224.1|147131_148889_-|terminase	terminase	terminase	E5E3X0	Burkholderia_phage	41.0	1.6e-112
WP_088879225.1|149021_149861_+|capsid	phage capsid protein	capsid	Q9ZXM4	Pseudomonas_virus	35.2	1.7e-19
WP_088879226.1|149904_150969_+|capsid	phage major capsid protein, P2 family	capsid	A0A0U4K5I9	Pseudomonas_phage	40.2	1.4e-58
WP_088879227.1|151088_151538_+|head	head completion/stabilization protein	head	NA	NA	NA	NA
WP_088879228.1|151537_152005_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_088879229.1|151998_152568_+	virion morphogenesis protein	NA	NA	NA	NA	NA
WP_088879230.1|152567_152768_+	DUF2635 domain-containing protein	NA	NA	NA	NA	NA
WP_088879231.1|152767_153913_+|tail	phage tail protein	tail	C9DGP7	Escherichia_phage	38.0	3.1e-48
153497:153510	attR	GTCAATTCTGCCAA	NA	NA	NA	NA
WP_045419968.1|153916_154282_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088879232.1|154293_154992_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088879233.1|154975_155275_+|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_082038263.1|155319_155424_+|tail	GpE family phage tail protein	tail	NA	NA	NA	NA
>prophage 2
NZ_CP018311	Vibrio rotiferianus strain B64D1 chromosome 1, complete sequence	1951588	1161709	1170346	1951588		Bacillus_phage(16.67%)	7	NA	NA
WP_088879782.1|1161709_1162711_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	34.0	7.5e-14
WP_088880245.1|1163108_1163783_-	fructose-6-phosphate aldolase	NA	A0A0E3FNR2	Synechococcus_phage	31.8	1.2e-26
WP_088879783.1|1164037_1164979_+	glycyl-radical enzyme activating protein	NA	A0A2P0VNQ0	Tetraselmis_virus	24.1	6.6e-12
WP_088879784.1|1164981_1167420_+	formate C-acetyltransferase/glycerol dehydratase family glycyl radical enzyme	NA	A0A1S6KUZ1	Providencia_phage	40.3	2.3e-08
WP_162531032.1|1167636_1169187_+	methyl-accepting chemotaxis protein	NA	A0A1B0V854	Salmonella_phage	54.0	1.6e-34
WP_088879786.1|1169528_1169858_+	hypothetical protein	NA	NA	NA	NA	NA
WP_088879787.1|1169881_1170346_+	NUDIX domain-containing protein	NA	D0R7J3	Paenibacillus_phage	30.6	1.8e-15
>prophage 1
NZ_CP018312	Vibrio rotiferianus strain B64D1 chromosome 2	3326271	355388	372839	3326271	tRNA	uncultured_Mediterranean_phage(18.18%)	15	NA	NA
WP_005449808.1|355388_357029_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	51.9	9.4e-155
WP_005425372.1|357107_358409_+	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	60.3	3.5e-136
WP_088880377.1|359009_359291_+	cell division protein FtsB	NA	NA	NA	NA	NA
WP_088880378.1|359292_360003_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	A0A2H4UTB4	Bodo_saltans_virus	25.6	1.7e-07
WP_088880379.1|360017_360494_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
WP_088880380.1|360539_361583_+|tRNA	tRNA pseudouridine(13) synthase TruD	tRNA	NA	NA	NA	NA
WP_071235295.1|361582_362359_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	54.1	5.4e-68
WP_010450248.1|362358_362985_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	53.9	1.8e-37
WP_038885718.1|362999_363911_+	murein hydrolase activator NlpD	NA	I3PV79	Clostridium_phage	34.4	1.1e-14
WP_010450244.1|363991_364978_+	RNA polymerase sigma factor RpoS	NA	F4YCU2	Synechococcus_phage	35.2	5.3e-36
WP_088880381.1|365066_367628_-	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	22.5	3.7e-33
WP_071235297.1|367713_368196_+	nicotinamide-nucleotide amidase	NA	B5TK85	Pseudomonas_phage	48.1	1.2e-25
WP_005425359.1|368396_369440_+	recombinase RecA	NA	A0A2D1GPX2	Mycobacterium_phage	60.7	1.1e-111
WP_088880382.1|369646_370117_+	recombination regulator RecX	NA	NA	NA	NA	NA
WP_088880383.1|370256_372839_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	37.7	3.8e-78
>prophage 2
NZ_CP018312	Vibrio rotiferianus strain B64D1 chromosome 2	3326271	960862	970802	3326271	tRNA	Mycobacterium_phage(16.67%)	7	NA	NA
WP_088880562.1|960862_964069_+	cell division protein FtsK	NA	A0A218M9A2	Mycobacterium_phage	49.3	2.5e-87
WP_010449221.1|964143_964770_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_071234803.1|964776_966126_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	43.2	3.8e-85
WP_088880563.1|966217_967525_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	43.0	1.7e-90
WP_088880564.1|967727_968630_+	DUF3380 domain-containing protein	NA	A0A291LBS7	Pseudomonas_phage	43.5	1.3e-36
WP_045394326.1|969185_969452_+	DksA/TraR family C4-type zinc finger protein	NA	A0A1S6UBD1	Serratia_phage	47.7	3.6e-16
WP_088880565.1|969521_970802_-	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	25.4	2.8e-21
>prophage 3
NZ_CP018312	Vibrio rotiferianus strain B64D1 chromosome 2	3326271	2115204	2176308	3326271	integrase,plate,protease	Bacillus_virus(12.5%)	45	2160106:2160123	2178921:2178938
WP_010447003.1|2115204_2116485_-|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	57.6	2.5e-131
WP_005430931.1|2116556_2117183_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	60.9	1.4e-63
WP_010446997.1|2117288_2118593_-	trigger factor	NA	NA	NA	NA	NA
WP_088881126.1|2119118_2120924_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_088881127.1|2120928_2122278_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_045392838.1|2122555_2123917_-	TRAP transporter large permease	NA	NA	NA	NA	NA
WP_010446973.1|2123920_2124595_-	TRAP transporter small permease	NA	NA	NA	NA	NA
WP_010446971.1|2124670_2125669_-	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA	NA
WP_088881128.1|2125884_2127354_-	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	35.9	5.6e-58
WP_088881129.1|2128811_2131787_-|protease	M6 family metalloprotease domain-containing protein	protease	NA	NA	NA	NA
WP_088881130.1|2132022_2133390_-	Ktr system potassium transporter B	NA	NA	NA	NA	NA
WP_038887536.1|2133386_2134049_-	TrkA family potassium uptake protein	NA	NA	NA	NA	NA
WP_088881131.1|2134461_2136069_+	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	24.7	7.1e-22
WP_088881132.1|2136171_2137407_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.8	1.4e-54
WP_162531075.1|2137622_2138897_+	DUF21 domain-containing protein	NA	NA	NA	NA	NA
WP_088881133.1|2139308_2140274_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_088881134.1|2140340_2142242_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088881135.1|2142257_2142896_-	protein kinase	NA	NA	NA	NA	NA
WP_088881136.1|2142898_2146351_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_010446946.1|2146352_2147495_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_029843212.1|2147502_2148819_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_010446941.1|2148821_2149289_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_088881137.1|2149288_2150236_-	FHA domain-containing protein	NA	NA	NA	NA	NA
WP_010446937.1|2150269_2150965_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_088881138.1|2150967_2152101_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088881139.1|2152097_2154293_-	MFS transporter	NA	NA	NA	NA	NA
WP_088881140.1|2154302_2155457_-	ATP-grasp domain-containing protein	NA	NA	NA	NA	NA
WP_088881141.1|2155601_2158208_-	type VI secretion system ATPase TssH	NA	H6X3M6	Enterobacteria_phage	31.9	1.2e-82
WP_071235608.1|2158216_2159200_-	type VI secretion protein VasB-1	NA	NA	NA	NA	NA
WP_088881142.1|2159181_2160963_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
2160106:2160123	attL	ATTCAAGAAAATCTGAAT	NA	NA	NA	NA
WP_010446924.1|2160955_2161372_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_038886657.1|2161368_2162724_-	type VI secretion protein	NA	NA	NA	NA	NA
WP_088881143.1|2162770_2164249_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_008219012.1|2164248_2164758_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_008219014.1|2164827_2165358_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
WP_088881144.1|2165384_2166776_-	type VI secretion protein	NA	NA	NA	NA	NA
WP_088881145.1|2167456_2169454_+	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	23.6	2.0e-21
WP_088881146.1|2169453_2170017_+	Twin-arginine translocation pathway signal	NA	NA	NA	NA	NA
WP_010446907.1|2170026_2170323_+	type VI secretion protein	NA	NA	NA	NA	NA
WP_088881147.1|2170391_2171480_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088881148.1|2171594_2171960_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088881149.1|2172004_2172622_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088881150.1|2172890_2174018_-	HNH endonuclease	NA	NA	NA	NA	NA
WP_088881151.1|2174032_2174623_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_088881152.1|2175018_2176308_+|integrase	site-specific integrase	integrase	A0A1B0VMI6	Pseudomonas_phage	25.1	2.2e-18
2178921:2178938	attR	ATTCAAGAAAATCTGAAT	NA	NA	NA	NA
>prophage 4
NZ_CP018312	Vibrio rotiferianus strain B64D1 chromosome 2	3326271	2421554	2428244	3326271		Staphylococcus_phage(66.67%)	7	NA	NA
WP_005440184.1|2421554_2422025_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	49.3	1.7e-32
WP_010446326.1|2422194_2423304_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	39.6	2.0e-63
WP_088881254.1|2423462_2424116_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	39.0	3.3e-34
WP_088881255.1|2424127_2425252_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	35.7	5.4e-45
WP_010446320.1|2425259_2425709_-	transcriptional regulator NrdR	NA	NA	NA	NA	NA
WP_088881256.1|2425836_2427087_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	47.4	3.1e-97
WP_010446316.1|2427104_2428244_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	41.7	3.8e-62
>prophage 5
NZ_CP018312	Vibrio rotiferianus strain B64D1 chromosome 2	3326271	2501410	2508477	3326271		Megavirus(16.67%)	9	NA	NA
WP_010446164.1|2501410_2501836_-	nucleoside-diphosphate kinase	NA	L7Y4C4	Megavirus	41.4	3.5e-21
WP_010446162.1|2501936_2503235_-	aminopeptidase PepB	NA	Q6GYZ8	Mycoplasma_phage	34.7	9.1e-36
WP_005424887.1|2503406_2503601_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_005424889.1|2503646_2503985_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_088881285.1|2503998_2505852_-	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	40.4	7.2e-111
WP_005424897.1|2505873_2506389_-	co-chaperone HscB	NA	NA	NA	NA	NA
WP_005424893.1|2506444_2506768_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	51.4	1.0e-25
WP_005424883.1|2506841_2507225_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	78.2	5.4e-53
WP_088881286.1|2507262_2508477_-	IscS subfamily cysteine desulfurase	NA	A0A1X7C038	Faustovirus	30.2	5.7e-32
