The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP007459	Listeria monocytogenes serotype 4b str. 02-1103, complete genome	2979105	92483	134651	2979105	integrase,holin,portal,terminase,plate,tail	Listeria_phage(95.08%)	64	93558:93602	134954:134998
WP_010958669.1|92483_93440_+	2-hydroxyacid dehydrogenase	NA	M1H502	Paramecium_bursaria_Chlorella_virus	29.6	9.3e-30
93558:93602	attL	ACTCTTAATCAGCGGGTCGGGGGTTCGAAACCCTCACAACCCATA	NA	NA	NA	NA
WP_003734959.1|93706_94909_-|integrase	site-specific integrase	integrase	A0A0B5CTW8	Listeria_phage	99.0	8.5e-222
WP_003734960.1|94974_95715_-	hypothetical protein	NA	A0A059T7X3	Listeria_phage	100.0	4.5e-133
WP_003727738.1|95736_96459_-	hypothetical protein	NA	A0A059T7P9	Listeria_phage	100.0	1.3e-105
WP_003727739.1|96474_96693_-	zinc-ribbon domain-containing protein	NA	A0A059T6E3	Listeria_phage	100.0	5.4e-34
WP_003727740.1|96715_97207_-	hypothetical protein	NA	A0A059T5E8	Listeria_phage	100.0	3.4e-92
WP_003727741.1|97239_97545_-	helix-turn-helix transcriptional regulator	NA	A0A059T669	Listeria_phage	100.0	6.4e-49
WP_003727742.1|97670_97913_+	helix-turn-helix transcriptional regulator	NA	A0A059T7X5	Listeria_phage	100.0	1.7e-36
WP_003727743.1|97916_98183_+	hypothetical protein	NA	A0A059T7Q1	Listeria_phage	100.0	2.5e-41
WP_003735007.1|98406_98601_+	hypothetical protein	NA	A0A059T6E5	Listeria_phage	100.0	1.3e-26
WP_003735006.1|98612_98897_+	hypothetical protein	NA	A0A0B5D168	Listeria_phage	100.0	1.1e-47
WP_003727747.1|98922_99204_+	hypothetical protein	NA	A0A0B5CTX3	Listeria_phage	100.0	1.0e-40
WP_003727749.1|99389_99632_-	hypothetical protein	NA	A0A059T7Q3	Listeria_phage	100.0	1.8e-38
WP_069007990.1|99695_100472_+	antirepressor	NA	A0A0B5D0I2	Listeria_phage	95.3	2.7e-136
WP_069002477.1|100594_101119_+	hypothetical protein	NA	A8ASM7	Listeria_phage	92.5	1.3e-81
WP_003731816.1|101125_101311_+	helix-turn-helix domain-containing protein	NA	A0A059T674	Listeria_phage	100.0	1.1e-27
WP_003734954.1|101326_101515_+	hypothetical protein	NA	A0A0B5CU43	Listeria_phage	100.0	4.5e-29
WP_069007989.1|101747_103259_+	ATPase	NA	A0A2I7SC81	Paenibacillus_phage	35.8	2.6e-74
WP_069007988.1|103251_104163_+	recombinase RecT	NA	NA	NA	NA	NA
WP_069007987.1|104202_105177_+	DnaD domain protein	NA	A8ASN4	Listeria_phage	87.7	1.6e-157
WP_021496290.1|105173_105425_+	hypothetical protein	NA	Q8W5X5	Listeria_phage	91.6	1.2e-34
WP_021496930.1|105453_105723_+	hypothetical protein	NA	A0A0B5CU46	Listeria_phage	100.0	2.9e-45
WP_021496931.1|105719_106112_+	hypothetical protein	NA	A0A0B5CYQ9	Listeria_phage	98.5	9.9e-71
WP_021496932.1|106108_106648_+	DUF1642 domain-containing protein	NA	A0A0B5D0I5	Listeria_phage	100.0	3.9e-102
WP_021496935.1|107167_107365_+	hypothetical protein	NA	A0A0B5CU49	Listeria_phage	100.0	3.6e-29
WP_021496936.1|107361_107745_+	hypothetical protein	NA	A0A0B5CYR4	Listeria_phage	62.6	5.7e-39
WP_069007986.1|107741_107957_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003731703.1|107953_108130_+	hypothetical protein	NA	A0A076G7F4	Listeria_phage	87.9	1.9e-21
WP_003743374.1|108129_108315_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003743375.1|108315_108543_+	DUF3850 domain-containing protein	NA	A0A059T7N3	Listeria_phage	96.0	1.9e-34
WP_034172803.1|108553_108955_+	hypothetical protein	NA	A8ATZ6	Listeria_phage	82.7	1.7e-54
WP_069007985.1|108954_109437_+	single-stranded DNA-binding protein	NA	A0A059T5E0	Listeria_phage	90.0	1.5e-76
WP_003743380.1|109455_109647_+	hypothetical protein	NA	A8ASP6	Listeria_phage	95.2	8.9e-25
WP_031541233.1|109591_109996_+	DUF1064 domain-containing protein	NA	A8ASP7	Listeria_phage	94.0	5.4e-64
WP_003743384.1|109999_110383_+	DUF2481 domain-containing protein	NA	A8ASP8	Listeria_phage	96.9	2.0e-63
WP_003727776.1|110511_110676_+	hypothetical protein	NA	A8ASQ0	Listeria_phage	92.6	2.5e-20
WP_003743388.1|110694_111129_+	hypothetical protein	NA	A8ASQ1	Listeria_phage	98.6	9.6e-75
WP_058833461.1|111492_112212_+	hypothetical protein	NA	Q9T152	Listeria_phage	54.2	1.3e-60
WP_003743392.1|112277_112820_+|terminase	terminase small subunit	terminase	A8ASJ1	Listeria_phage	98.3	1.2e-90
WP_020830818.1|112788_114120_+|terminase	PBSX family phage terminase large subunit	terminase	A0A059T5E2	Listeria_phage	99.5	1.3e-263
WP_003743397.1|114132_115632_+|portal	phage portal protein	portal	A0A059T657	Listeria_phage	100.0	1.0e-277
WP_003734943.1|115637_116777_+	hypothetical protein	NA	A0A059T7W2	Listeria_phage	100.0	1.7e-208
WP_003734944.1|116855_117446_+	scaffold protein	NA	A0A059T7N8	Listeria_phage	100.0	2.5e-86
WP_003734945.1|117445_118447_+	hypothetical protein	NA	A0A059T6D4	Listeria_phage	100.0	7.4e-187
WP_003734946.1|118465_118861_+	hypothetical protein	NA	A0A059T5E3	Listeria_phage	100.0	5.1e-67
WP_003759699.1|118860_119223_+	hypothetical protein	NA	A8ASJ9	Listeria_phage	93.3	5.0e-61
WP_031645711.1|119222_119561_+	hypothetical protein	NA	A0A059T7W4	Listeria_phage	97.3	7.0e-57
WP_003737937.1|119560_119968_+	hypothetical protein	NA	A8ASK1	Listeria_phage	99.3	2.0e-66
WP_058833463.1|119970_120408_+	hypothetical protein	NA	A0A059T6D6	Listeria_phage	99.3	7.2e-78
WP_077947089.1|120337_120670_+	Ig domain-containing protein	NA	A0A059T5E4	Listeria_phage	97.9	5.3e-41
WP_058833465.1|120722_121145_+	hypothetical protein	NA	A8ASK4	Listeria_phage	97.1	2.2e-68
WP_058833466.1|121150_121753_+	hypothetical protein	NA	A8ASK5	Listeria_phage	99.5	8.3e-109
WP_069007984.1|121763_127130_+	tape measure protein	NA	Q9T1A7	Listeria_phage	90.9	0.0e+00
WP_003743410.1|127126_127954_+|tail	phage tail family protein	tail	A8ASK7	Listeria_phage	100.0	2.4e-159
WP_003743412.1|127953_128991_+	hypothetical protein	NA	A8ASK8	Listeria_phage	100.0	2.0e-195
WP_010990226.1|128991_130017_+	hypothetical protein	NA	A8ASK9	Listeria_phage	100.0	2.3e-175
WP_058833468.1|130013_131081_+|plate	BppU family phage baseplate upper protein	plate	A8ASL0	Listeria_phage	99.2	4.4e-161
WP_003725055.1|131077_131419_+	hypothetical protein	NA	A8ASL1	Listeria_phage	100.0	4.2e-57
WP_003725054.1|131419_131566_+	XkdX family protein	NA	A8ASL2	Listeria_phage	100.0	1.1e-19
WP_003725053.1|131602_131968_+	hypothetical protein	NA	A8ASL3	Listeria_phage	100.0	1.3e-11
WP_058833469.1|131980_132262_+|holin	holin	holin	A8ASL4	Listeria_phage	98.9	2.4e-42
WP_069007983.1|132261_133131_+	N-acetylmuramoyl-L-alanine amidase family protein	NA	A8ASL5	Listeria_phage	97.6	6.7e-168
WP_031645688.1|133570_134182_+	hypothetical protein	NA	A0A0A8WFI2	Clostridium_phage	39.3	3.1e-26
WP_020830779.1|134417_134651_+	hypothetical protein	NA	A8ATX0	Listeria_phage	97.4	4.3e-37
134954:134998	attR	ACTCTTAATCAGCGGGTCGGGGGTTCGAAACCCTCACAACCCATA	NA	NA	NA	NA
>prophage 2
NZ_CP007459	Listeria monocytogenes serotype 4b str. 02-1103, complete genome	2979105	174349	180876	2979105	tail	Listeria_phage(33.33%)	10	NA	NA
WP_003728215.1|174349_174802_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A059T7S0	Listeria_phage	47.9	4.0e-31
WP_003721740.1|174807_175143_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JAR9	uncultured_Caudovirales_phage	52.5	4.0e-20
WP_003724946.1|175359_175788_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003724947.1|175799_176216_+	hypothetical protein	NA	A8ASQ1	Listeria_phage	38.6	1.3e-20
WP_003728212.1|176495_176885_+	DUF5072 domain-containing protein	NA	NA	NA	NA	NA
WP_003721744.1|176897_177410_+|tail	phage major tail protein, TP901-1 family	tail	A0A097PBF4	Streptococcus_pyogenes_phage	62.7	1.2e-47
WP_003721745.1|177457_177760_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003740367.1|177801_178206_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003731178.1|178192_180061_+	membrane protein	NA	A0A097PAU2	Streptococcus_pyogenes_phage	45.8	3.5e-20
WP_003734720.1|180057_180876_+|tail	phage tail family protein	tail	A0A060AFE1	Staphylococcus_phage	35.0	7.2e-39
>prophage 3
NZ_CP007459	Listeria monocytogenes serotype 4b str. 02-1103, complete genome	2979105	1341743	1398588	2979105	tRNA,protease	Bacillus_virus(17.65%)	55	NA	NA
WP_003734523.1|1341743_1342883_-|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_003723563.1|1342962_1343358_-	helix-turn-helix transcriptional regulator	NA	A9D9J6	Lactobacillus_prophage	57.4	1.3e-14
WP_003727524.1|1343508_1343724_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003727523.1|1343847_1344381_+|protease	matrixin family metalloprotease	protease	NA	NA	NA	NA
WP_010958879.1|1344396_1345062_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003727521.1|1345323_1346262_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003723884.1|1346376_1347660_+	trigger factor	NA	NA	NA	NA	NA
WP_003723886.1|1347844_1349104_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	63.2	1.4e-145
WP_003726393.1|1349222_1349789_+	type I signal peptidase SipX	NA	NA	NA	NA	NA
WP_003726394.1|1349823_1350393_+	type I signal peptidase SipY	NA	NA	NA	NA	NA
WP_003727520.1|1350494_1351037_+	type I signal peptidase SipZ	NA	NA	NA	NA	NA
WP_003726396.1|1351046_1351910_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA	NA
WP_003727519.1|1351906_1352692_+	ribonuclease HII	NA	G4YAY0	Emiliania_huxleyi_virus	37.6	6.7e-26
WP_003727518.1|1352825_1353686_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_003727517.1|1353958_1356037_+	type I DNA topoisomerase	NA	A0A1V0SB35	Catovirus	37.5	5.4e-107
WP_003727516.1|1356099_1357404_+|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
WP_003731303.1|1357686_1358589_+	tyrosine recombinase XerC	NA	A0A142K7N4	Mycobacterium_phage	29.5	1.8e-14
WP_003724001.1|1358609_1359149_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_003727514.1|1359162_1360572_+|protease	ATP-dependent protease ATPase subunit HslU	protease	W6AS21	Erwinia_phage	27.8	7.5e-44
WP_003726695.1|1360592_1361372_+	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA	NA
WP_003727513.1|1361474_1361894_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003724130.1|1361916_1362228_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003726697.1|1362230_1363103_+	aldose 1-epimerase family protein	NA	NA	NA	NA	NA
WP_003726698.1|1363144_1363741_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_003727511.1|1363898_1364306_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_003727510.1|1364486_1366454_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	42.5	5.1e-123
WP_010958880.1|1366450_1368910_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	31.8	1.1e-101
WP_003726814.1|1368992_1369460_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
WP_010958881.1|1370087_1371914_+	class 1 internalin InlK	NA	NA	NA	NA	NA
WP_003727507.1|1371946_1373833_-	acetyltransferase	NA	B5WZU0	Pseudomonas_phage	32.2	3.8e-43
WP_003726657.1|1374045_1374744_+	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	31.9	6.4e-12
WP_010958882.1|1374976_1376653_+	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_003726658.1|1376779_1377697_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_003719566.1|1377818_1378052_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_015084731.1|1378162_1379386_+	GTPase HflX	NA	NA	NA	NA	NA
WP_003727505.1|1379378_1380605_+	methionine gamma-lyase family protein	NA	NA	NA	NA	NA
WP_003719570.1|1380806_1381175_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003723435.1|1381245_1382580_+	type I glutamate--ammonia ligase	NA	A0A1V0SJ53	Klosneuvirus	26.4	2.0e-06
WP_069007997.1|1382723_1384019_+	arsenic transporter	NA	A0A2H4PQU3	Staphylococcus_phage	62.3	3.3e-147
WP_003734519.1|1384052_1384577_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003723438.1|1384607_1385222_-	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	62.1	9.3e-15
WP_003734518.1|1385378_1385708_+	cell division suppressor protein YneA	NA	NA	NA	NA	NA
WP_003734517.1|1385801_1386029_+	DUF896 domain-containing protein	NA	NA	NA	NA	NA
WP_003734516.1|1386175_1388170_+	transketolase	NA	NA	NA	NA	NA
WP_003726667.1|1388390_1388630_+	YneF family protein	NA	NA	NA	NA	NA
WP_003726668.1|1388678_1389410_-	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	58.0	2.3e-81
WP_003726669.1|1389431_1389938_-	ParB-like nuclease domain-containing protein	NA	A0A220GKT8	Streptococcus_phage	66.7	1.4e-56
WP_012681273.1|1391228_1392434_-	helicase SNF2	NA	L0P6E9	Lactobacillus_phage	46.6	7.0e-91
WP_003727498.1|1392411_1392786_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003723449.1|1393078_1393807_+	UMP kinase	NA	NA	NA	NA	NA
WP_003723450.1|1393806_1394364_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_003727497.1|1394594_1395353_+	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	42.1	4.4e-22
WP_003727496.1|1395366_1396155_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003726414.1|1396169_1397312_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_010958886.1|1397325_1398588_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
>prophage 4
NZ_CP007459	Listeria monocytogenes serotype 4b str. 02-1103, complete genome	2979105	1891521	1899807	2979105		Synechococcus_phage(33.33%)	8	NA	NA
WP_003726209.1|1891521_1892088_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	36.4	8.3e-26
WP_003726210.1|1892084_1893134_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	44.4	3.2e-63
WP_003722245.1|1893152_1894580_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.6	1.1e-53
WP_009918191.1|1894564_1896784_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	40.8	6.5e-159
WP_003726212.1|1896776_1897460_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_003722248.1|1897463_1897709_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_003726214.1|1897720_1898434_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3F9V5	Synechococcus_phage	38.3	2.0e-40
WP_003726215.1|1898514_1899807_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	33.0	2.5e-17
>prophage 5
NZ_CP007459	Listeria monocytogenes serotype 4b str. 02-1103, complete genome	2979105	2575215	2583060	2979105		Streptococcus_phage(50.0%)	7	NA	NA
WP_003725407.1|2575215_2576187_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.4	5.2e-52
WP_003725408.1|2576194_2577163_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	43.3	3.9e-68
WP_003722606.1|2577164_2578040_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.7	1.9e-08
WP_003734494.1|2578147_2579878_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	53.3	5.6e-174
WP_003741152.1|2579919_2580981_-	galactose mutarotase	NA	NA	NA	NA	NA
WP_003725411.1|2580997_2581981_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L5H6	Tupanvirus	38.1	4.0e-52
WP_003722610.1|2582100_2583060_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	53.7	2.0e-88
