assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002211885.1_ASM221188v1	NZ_CP022130	Lactobacillus pentosus strain SLC13 chromosome, complete genome	1	299298-300363	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,cas1	DinG,cas3,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,cas1,csa3,WYL,cas14j	Type I-E	CTATTCCCCGTGTATGCGGGGGTGATCCT,CTATTCCCCGTGTATGCGGGGGTGATCCT,CTATTCCCCGTGTATGCGGGGGTGATCC	29,29,28	0	0	NA	NA	NA:NA:NA	17,17,11	17	TypeI-E	DinG,cas3,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,cas1,csa3,WYL,cas14j	NA|161aa|up_6|NZ_CP022130.1_289257_289740_+,NA|156aa|down_2|NZ_CP022130.1_305203_305671_+	NA|105aa|up_9|NZ_CP022130.1_286363_286678_-	smart01103, CRS1_YhbY, Escherichia coli YhbY is associated with pre-50S ribosomal subunits, which implies a function in ribosome assembly	NA|379aa|up_8|NZ_CP022130.1_286764_287901_-	PRK13796, PRK13796, GTPase YqeH; Provisional	NA|177aa|up_7|NZ_CP022130.1_287897_288428_-	COG2179, COG2179, Predicted hydrolase of the HAD superfamily [General function prediction only]	NA|161aa|up_6|NZ_CP022130.1_289257_289740_+	NA	cas6e|223aa|up_5|NZ_CP022130.1_291209_291878_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|242aa|up_4|NZ_CP022130.1_291877_292603_-	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|360aa|up_3|NZ_CP022130.1_292583_293663_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|204aa|up_2|NZ_CP022130.1_293662_294274_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|584aa|up_1|NZ_CP022130.1_294263_296015_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|916aa|up_0|NZ_CP022130.1_296019_298767_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	DEDDh|300aa|down_0|NZ_CP022130.1_300574_301474_-	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family	cas1|318aa|down_1|NZ_CP022130.1_301470_302424_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	NA|156aa|down_2|NZ_CP022130.1_305203_305671_+	NA	NA|250aa|down_3|NZ_CP022130.1_305949_306699_-	pfam01177, Asp_Glu_race, Asp/Glu/Hydantoin racemase	NA|119aa|down_4|NZ_CP022130.1_306990_307347_-	PRK05185, rplT, 50S ribosomal protein L20; Provisional	NA|65aa|down_5|NZ_CP022130.1_307383_307578_-	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed	NA|174aa|down_6|NZ_CP022130.1_307599_308121_-	PRK00028, infC, translation initiation factor IF-3; Reviewed	NA|655aa|down_7|NZ_CP022130.1_308342_310307_-	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed	NA|312aa|down_8|NZ_CP022130.1_310639_311575_-	PRK08939, PRK08939, primosomal protein DnaI; Reviewed	NA|479aa|down_9|NZ_CP022130.1_311578_313015_-	COG3611, DnaB, Replication initiation/membrane attachment protein [DNA replication, recombination, and repair]
GCF_002211885.1_ASM221188v1	NZ_CP022130	Lactobacillus pentosus strain SLC13 chromosome, complete genome	2	302981-304899	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,cas1	DinG,cas3,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,cas1,csa3,WYL,cas14j	Type I-E	CTGTTCCCCGCGTATGCGGGGGTGATCC,CTGTTCCCCGCGTATGCGGGGGTGATCC,CTGTTCCCCGCGTATGCGGGGGTGATCC	28,28,28	0	0	NA	NA	I-C,I-E,II-B:I-C,I-E,II-B:I-C,I-E,II-B	30,31,31	31	TypeI-E	DinG,cas3,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,cas1,csa3,WYL,cas14j	NA|161aa|up_8|NZ_CP022130.1_289257_289740_+,NA|156aa|down_0|NZ_CP022130.1_305203_305671_+	NA|177aa|up_9|NZ_CP022130.1_287897_288428_-	COG2179, COG2179, Predicted hydrolase of the HAD superfamily [General function prediction only]	NA|161aa|up_8|NZ_CP022130.1_289257_289740_+	NA	cas6e|223aa|up_7|NZ_CP022130.1_291209_291878_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|242aa|up_6|NZ_CP022130.1_291877_292603_-	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|360aa|up_5|NZ_CP022130.1_292583_293663_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|204aa|up_4|NZ_CP022130.1_293662_294274_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|584aa|up_3|NZ_CP022130.1_294263_296015_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|916aa|up_2|NZ_CP022130.1_296019_298767_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	DEDDh|300aa|up_1|NZ_CP022130.1_300574_301474_-	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family	cas1|318aa|up_0|NZ_CP022130.1_301470_302424_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	NA|156aa|down_0|NZ_CP022130.1_305203_305671_+	NA	NA|250aa|down_1|NZ_CP022130.1_305949_306699_-	pfam01177, Asp_Glu_race, Asp/Glu/Hydantoin racemase	NA|119aa|down_2|NZ_CP022130.1_306990_307347_-	PRK05185, rplT, 50S ribosomal protein L20; Provisional	NA|65aa|down_3|NZ_CP022130.1_307383_307578_-	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed	NA|174aa|down_4|NZ_CP022130.1_307599_308121_-	PRK00028, infC, translation initiation factor IF-3; Reviewed	NA|655aa|down_5|NZ_CP022130.1_308342_310307_-	PRK00413, thrS, threonyl-tRNA synthetase; Reviewed	NA|312aa|down_6|NZ_CP022130.1_310639_311575_-	PRK08939, PRK08939, primosomal protein DnaI; Reviewed	NA|479aa|down_7|NZ_CP022130.1_311578_313015_-	COG3611, DnaB, Replication initiation/membrane attachment protein [DNA replication, recombination, and repair]	NA|172aa|down_8|NZ_CP022130.1_313036_313552_-	PRK00464, nrdR, transcriptional repressor NrdR	NA|198aa|down_9|NZ_CP022130.1_313591_314185_-	PRK00081, coaE, dephospho-CoA kinase; Reviewed
GCF_002211885.1_ASM221188v1	NZ_CP022130	Lactobacillus pentosus strain SLC13 chromosome, complete genome	3	515518-522878	3	CRT	no		DinG,cas3,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,cas1,csa3,WYL,cas14j	Orphan	TCNGANTCNGANTCNCNNTC	20	0	0	NA	NA	NA	101	101	Orphan	DinG,cas3,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,cas1,csa3,WYL,cas14j	NA|66aa|up_2|NZ_CP022130.1_509728_509926_-,NA|545aa|up_0|NZ_CP022130.1_513026_514661_-,NA|240aa|down_2|NZ_CP022130.1_531158_531878_+	NA|468aa|up_9|NZ_CP022130.1_499036_500440_-	PRK07318, PRK07318, dipeptidase PepV; Reviewed	NA|281aa|up_8|NZ_CP022130.1_500697_501540_+	cd01171, YXKO-related, B	NA|247aa|up_7|NZ_CP022130.1_501787_502528_-	cd02553, PseudoU_synth_RsuA, Pseudouridine synthase, Escherichia coli RsuA like	NA|557aa|up_6|NZ_CP022130.1_502535_504206_-	cd13124, MATE_SpoVB_like, Stage V sporulation protein B, also known as Stage III sporulation protein F, and related proteins	NA|809aa|up_5|NZ_CP022130.1_505318_507745_-	PRK00390, leuS, leucyl-tRNA synthetase; Validated	NA|217aa|up_4|NZ_CP022130.1_508224_508875_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|176aa|up_3|NZ_CP022130.1_508943_509471_+	pfam06962, rRNA_methylase, Putative rRNA methylase	NA|66aa|up_2|NZ_CP022130.1_509728_509926_-	NA	NA|503aa|up_1|NZ_CP022130.1_511491_513000_-	cd04949, GT4_GtfA-like, accessory Sec system glycosyltransferase GtfA and similar proteins	NA|545aa|up_0|NZ_CP022130.1_513026_514661_-	NA	NA|503aa|down_0|NZ_CP022130.1_528115_529624_-	cd17502, MFS_Azr1_MDR_like, Saccharomyces cerevisiae Azole resistance protein 1 (Azr1p), and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|397aa|down_1|NZ_CP022130.1_529760_530951_-	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|240aa|down_2|NZ_CP022130.1_531158_531878_+	NA	NA|503aa|down_3|NZ_CP022130.1_531945_533454_-	cd04949, GT4_GtfA-like, accessory Sec system glycosyltransferase GtfA and similar proteins	NA|305aa|down_4|NZ_CP022130.1_533975_534890_-	PRK09485, mmuM, homocysteine methyltransferase; Provisional	NA|464aa|down_5|NZ_CP022130.1_535003_536395_+	PRK11387, PRK11387, S-methylmethionine permease	NA|320aa|down_6|NZ_CP022130.1_536955_537915_+	pfam00762, Ferrochelatase, Ferrochelatase	NA|442aa|down_7|NZ_CP022130.1_537901_539227_+	PRK00701, PRK00701, divalent metal cation transporter MntH	NA|301aa|down_8|NZ_CP022130.1_539569_540472_-	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|405aa|down_9|NZ_CP022130.1_540464_541679_-	cd17473, MFS_arabinose_efflux_permease_like, Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily
GCF_002211885.1_ASM221188v1	NZ_CP022130	Lactobacillus pentosus strain SLC13 chromosome, complete genome	4	547578-548888	3,4,3	CRISPRCasFinder,CRT,PILER-CR	no		DinG,cas3,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,cas1,csa3,WYL,cas14j	Orphan	CTGTTCCCCGTGTATGCGGGGGTGATCC,CTGTTCCCCGTGTATGCGGGGGTGATCC,CTGTTCCCCGTGTATGCGGGGGTGATCC	28,28,28	0	0	NA	NA	NA:NA:NA	21,21,9	21	Orphan	DinG,cas3,cas6e,cas5,cas7,cse2gr11,cas8e,DEDDh,cas1,csa3,WYL,cas14j	NA|174aa|up_1|NZ_CP022130.1_545803_546325_-,NA|162aa|down_0|NZ_CP022130.1_549137_549623_-,NA|65aa|down_1|NZ_CP022130.1_549693_549888_-	NA|320aa|up_9|NZ_CP022130.1_536955_537915_+	pfam00762, Ferrochelatase, Ferrochelatase	NA|442aa|up_8|NZ_CP022130.1_537901_539227_+	PRK00701, PRK00701, divalent metal cation transporter MntH	NA|301aa|up_7|NZ_CP022130.1_539569_540472_-	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|405aa|up_6|NZ_CP022130.1_540464_541679_-	cd17473, MFS_arabinose_efflux_permease_like, Putative arabinose efflux permease family transporters of the Major Facilitator Superfamily	NA|297aa|up_5|NZ_CP022130.1_541691_542582_-	COG0657, Aes, Esterase/lipase [Lipid metabolism]	NA|291aa|up_4|NZ_CP022130.1_542871_543744_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|279aa|up_3|NZ_CP022130.1_544136_544973_+	cd00841, MPP_YfcE, Escherichia coli YfcE and related proteins, metallophosphatase domain	NA|173aa|up_2|NZ_CP022130.1_545086_545605_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|174aa|up_1|NZ_CP022130.1_545803_546325_-	NA	NA|186aa|up_0|NZ_CP022130.1_546652_547210_+	PRK07322, PRK07322, adenine phosphoribosyltransferase; Provisional	NA|162aa|down_0|NZ_CP022130.1_549137_549623_-	NA	NA|65aa|down_1|NZ_CP022130.1_549693_549888_-	NA	NA|703aa|down_2|NZ_CP022130.1_557222_559331_-	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]	NA|79aa|down_3|NZ_CP022130.1_559487_559724_-	pfam08796, DUF1797, Protein of unknown function (DUF1797)	NA|396aa|down_4|NZ_CP022130.1_559916_561104_+	PRK07309, PRK07309, pyridoxal phosphate-dependent aminotransferase	NA|414aa|down_5|NZ_CP022130.1_561224_562466_-	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]	NA|350aa|down_6|NZ_CP022130.1_562536_563586_-	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|341aa|down_7|NZ_CP022130.1_563589_564612_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|393aa|down_8|NZ_CP022130.1_564664_565843_-	cd03817, GT4_UGDG-like, UDP-Glc:1,2-diacylglycerol 3-a-glucosyltransferase and similar proteins	NA|577aa|down_9|NZ_CP022130.1_567652_569383_-	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]
