assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002211825.1_ASM221182v1	NZ_CP022135	Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 chromosome, complete genome	1	952014-955949	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas1,cas2	cas14j,cas3,WYL,cas8e,cse2gr11,cas7,cas5,cas1,cas2,csa3,DEDDh,DinG	Type I-E	GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	28,29,29	2	2	955278-955310|955279-955310	NZ_CP022135.1_3257410-3257442|NZ_CP022135.1_3257411-3257442	I-E:I-E:I-E	63,64,64	64	TypeI-E	cas14j,cas3,WYL,cas8e,cse2gr11,cas7,cas5,cas1,cas2,csa3,DEDDh,DinG	NA,NA	NA|571aa|up_9|NZ_CP022135.1_939445_941158_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_8|NZ_CP022135.1_941266_942001_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|318aa|up_7|NZ_CP022135.1_942088_943042_-	PRK15379, PRK15379, type III secretion system effector SopD	cas3|888aa|up_6|NZ_CP022135.1_943481_946145_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas8e|519aa|up_5|NZ_CP022135.1_946156_947713_+	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cse2gr11|179aa|up_4|NZ_CP022135.1_947709_948246_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|353aa|up_3|NZ_CP022135.1_948259_949318_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|249aa|up_2|NZ_CP022135.1_949328_950075_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas1|307aa|up_1|NZ_CP022135.1_950703_951624_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP022135.1_951623_951917_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|349aa|down_0|NZ_CP022135.1_955963_957010_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP022135.1_957260_958169_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|480aa|down_2|NZ_CP022135.1_958178_959618_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP022135.1_959604_960210_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|119aa|down_4|NZ_CP022135.1_960227_960584_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP022135.1_960774_961086_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP022135.1_961104_961815_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP022135.1_961814_962294_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP022135.1_962290_963340_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP022135.1_963320_964082_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_002211825.1_ASM221182v1	NZ_CP022135	Salmonella enterica subsp. diarizonae serovar 65:c:z str. SA20044251 chromosome, complete genome	2	1295583-1295680	2	CRISPRCasFinder	no		cas14j,cas3,WYL,cas8e,cse2gr11,cas7,cas5,cas1,cas2,csa3,DEDDh,DinG	Orphan	AACCCATCAACGATGCAGCGAAG	23	0	0	NA	NA	NA	1	1	Orphan	cas14j,cas3,WYL,cas8e,cse2gr11,cas7,cas5,cas1,cas2,csa3,DEDDh,DinG	NA|113aa|up_9|NZ_CP022135.1_1287555_1287894_+,NA|493aa|up_7|NZ_CP022135.1_1288587_1290066_+,NA|100aa|up_6|NZ_CP022135.1_1290109_1290409_-,NA|69aa|up_5|NZ_CP022135.1_1291072_1291279_+,NA|99aa|up_3|NZ_CP022135.1_1292960_1293257_+,NA|180aa|down_4|NZ_CP022135.1_1299719_1300259_+,NA|59aa|down_8|NZ_CP022135.1_1307072_1307249_+,NA|65aa|down_9|NZ_CP022135.1_1307346_1307541_+	NA|113aa|up_9|NZ_CP022135.1_1287555_1287894_+	NA	NA|198aa|up_8|NZ_CP022135.1_1287997_1288591_+	pfam03592, Terminase_2, Terminase small subunit	NA|493aa|up_7|NZ_CP022135.1_1288587_1290066_+	NA	NA|100aa|up_6|NZ_CP022135.1_1290109_1290409_-	NA	NA|69aa|up_5|NZ_CP022135.1_1291072_1291279_+	NA	NA|557aa|up_4|NZ_CP022135.1_1291293_1292964_+	PHA00670, PHA00670, hypothetical protein	NA|99aa|up_3|NZ_CP022135.1_1292960_1293257_+	NA	NA|237aa|up_2|NZ_CP022135.1_1293259_1293970_+	PHA00666, PHA00666, putative protease	NA|329aa|up_1|NZ_CP022135.1_1293984_1294971_+	PHA00665, PHA00665, major capsid protein	NA|146aa|up_0|NZ_CP022135.1_1295022_1295460_+	PHA00664, PHA00664, hypothetical protein	NA|108aa|down_0|NZ_CP022135.1_1295856_1296180_+	PHA00669, PHA00669, hypothetical protein	NA|202aa|down_1|NZ_CP022135.1_1296179_1296785_+	PHA00662, PHA00662, hypothetical protein	NA|824aa|down_2|NZ_CP022135.1_1296784_1299256_+	PHA00661, PHA00661, hypothetical protein	NA|155aa|down_3|NZ_CP022135.1_1299255_1299720_+	PHA01733, PHA01733, hypothetical protein	NA|180aa|down_4|NZ_CP022135.1_1299719_1300259_+	NA	NA|838aa|down_5|NZ_CP022135.1_1300271_1302785_+	PHA02564, V, virion protein; Provisional	NA|601aa|down_6|NZ_CP022135.1_1302781_1304584_+	cd08638, DNA_pol_A_theta, DNA polymerase theta is a low-fidelity family A enzyme implicated in translesion synthesis and in somatic hypermutation	NA|825aa|down_7|NZ_CP022135.1_1304588_1307063_+	PHA01972, PHA01972, structural protein	NA|59aa|down_8|NZ_CP022135.1_1307072_1307249_+	NA	NA|65aa|down_9|NZ_CP022135.1_1307346_1307541_+	NA
