assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002211565.1_ASM221156v1	NZ_CP022116	Salmonella enterica subsp. enterica serovar Ouakam str. SA20034636 chromosome, complete genome	1	594732-594832	1	CRISPRCasFinder	no		cas3,PD-DExK,DEDDh,WYL,csa3,DinG	Orphan	GCTTCAGTGGCGAACGTCGTGAA	23	0	0	NA	NA	NA	1	1	Orphan	cas3,PD-DExK,DEDDh,WYL,csa3,DinG	NA,NA	NA|448aa|up_9|NZ_CP022116.1_580810_582154_-	PRK05370, PRK05370, argininosuccinate synthase; Validated	NA|151aa|up_8|NZ_CP022116.1_582781_583234_+	PRK00092, PRK00092, ribosome maturation protein RimP; Reviewed	NA|501aa|up_7|NZ_CP022116.1_583261_584764_+	PRK09202, nusA, transcription elongation factor NusA; Validated	NA|893aa|up_6|NZ_CP022116.1_584788_587467_+	PRK05306, infB, translation initiation factor IF-2; Validated	NA|134aa|up_5|NZ_CP022116.1_587687_588089_+	PRK00521, rbfA, 30S ribosome-binding factor RbfA	NA|315aa|up_4|NZ_CP022116.1_588088_589033_+	PRK05033, truB, tRNA pseudouridine synthase B; Provisional	NA|90aa|up_3|NZ_CP022116.1_589183_589453_+	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed	NA|712aa|up_2|NZ_CP022116.1_589694_591830_+	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional	NA|295aa|up_1|NZ_CP022116.1_591939_592824_+	PRK11189, PRK11189, lipoprotein NlpI; Provisional	NA|27aa|up_0|NZ_CP022116.1_592929_593010_+	NF033440, small_YrbN, protein YrbN	NA|415aa|down_0|NZ_CP022116.1_595046_596291_+	PRK10483, PRK10483, tryptophan permease; Provisional	NA|336aa|down_1|NZ_CP022116.1_596381_597389_-	PRK10508, PRK10508, luciferase-like monooxygenase	NA|299aa|down_2|NZ_CP022116.1_597565_598462_-	PRK15447, PRK15447, putative protease; Provisional	NA|332aa|down_3|NZ_CP022116.1_598452_599448_-	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]	NA|175aa|down_4|NZ_CP022116.1_599664_600189_+	COG3154, COG3154, Putative lipid carrier protein [Lipid metabolism]	NA|168aa|down_5|NZ_CP022116.1_600182_600686_+	COG3153, COG3153, Predicted acetyltransferase [General function prediction only]	NA|106aa|down_6|NZ_CP022116.1_600672_600990_-	PRK00329, PRK00329, GIY-YIG nuclease superfamily protein; Validated	NA|148aa|down_7|NZ_CP022116.1_601027_601471_+	PRK03467, PRK03467, hypothetical protein; Provisional	NA|173aa|down_8|NZ_CP022116.1_601450_601969_-	cd03134, GATase1_PfpI_like, A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus	NA|212aa|down_9|NZ_CP022116.1_602099_602735_+	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs
GCF_002211565.1_ASM221156v1	NZ_CP022116	Salmonella enterica subsp. enterica serovar Ouakam str. SA20034636 chromosome, complete genome	2	987995-990159	1,2,1,2	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no		cas3,PD-DExK,DEDDh,WYL,csa3,DinG	Orphan	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29,29	0	0	NA	NA	I-E:I-E:I-E:I-E	33,35,35,33	35	Orphan	cas3,PD-DExK,DEDDh,WYL,csa3,DinG	NA,NA	NA|179aa|up_9|NZ_CP022116.1_976541_977078_-	PRK15260, PRK15260, fimbrial protein SteF; Provisional	NA|157aa|up_8|NZ_CP022116.1_977074_977545_-	PRK15276, PRK15276, putative fimbrial subunit SteE; Provisional	NA|169aa|up_7|NZ_CP022116.1_977559_978066_-	PRK15275, PRK15275, putative fimbrial protein SteD; Provisional	NA|258aa|up_6|NZ_CP022116.1_978085_978859_-	PRK15274, PRK15274, putative periplasmic fimbrial chaperone protein SteC; Provisional	NA|900aa|up_5|NZ_CP022116.1_978871_981571_-	PRK15273, PRK15273, fimbrial biogenesis outer membrane usher protein	NA|196aa|up_4|NZ_CP022116.1_981650_982238_-	PRK15261, PRK15261, fimbrial protein SteA; Provisional	NA|267aa|up_3|NZ_CP022116.1_982844_983645_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_2|NZ_CP022116.1_983872_985510_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_1|NZ_CP022116.1_985592_986891_+	PRK00077, eno, enolase; Provisional	NA|224aa|up_0|NZ_CP022116.1_987026_987698_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|266aa|down_0|NZ_CP022116.1_990257_991055_+	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only]	NA|121aa|down_1|NZ_CP022116.1_991144_991507_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|down_2|NZ_CP022116.1_991942_993742_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|down_3|NZ_CP022116.1_993741_995454_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|down_4|NZ_CP022116.1_995529_996264_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|318aa|down_5|NZ_CP022116.1_996476_997430_-	PRK15379, PRK15379, type III secretion system effector SopD	NA|349aa|down_6|NZ_CP022116.1_1000894_1001941_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_7|NZ_CP022116.1_1002191_1003100_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|480aa|down_8|NZ_CP022116.1_1003109_1004549_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_9|NZ_CP022116.1_1004535_1005141_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional
GCF_002211565.1_ASM221156v1	NZ_CP022116	Salmonella enterica subsp. enterica serovar Ouakam str. SA20034636 chromosome, complete genome	3	998900-1000880	3,3,2	PILER-CR,CRISPRCasFinder,CRT	no		cas3,PD-DExK,DEDDh,WYL,csa3,DinG	Orphan	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	31,32,32	32	Orphan	cas3,PD-DExK,DEDDh,WYL,csa3,DinG	NA,NA	NA|267aa|up_9|NZ_CP022116.1_982844_983645_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_8|NZ_CP022116.1_983872_985510_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_7|NZ_CP022116.1_985592_986891_+	PRK00077, eno, enolase; Provisional	NA|224aa|up_6|NZ_CP022116.1_987026_987698_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|266aa|up_5|NZ_CP022116.1_990257_991055_+	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only]	NA|121aa|up_4|NZ_CP022116.1_991144_991507_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|up_3|NZ_CP022116.1_991942_993742_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|up_2|NZ_CP022116.1_993741_995454_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_1|NZ_CP022116.1_995529_996264_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|318aa|up_0|NZ_CP022116.1_996476_997430_-	PRK15379, PRK15379, type III secretion system effector SopD	NA|349aa|down_0|NZ_CP022116.1_1000894_1001941_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP022116.1_1002191_1003100_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|480aa|down_2|NZ_CP022116.1_1003109_1004549_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP022116.1_1004535_1005141_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|119aa|down_4|NZ_CP022116.1_1005158_1005515_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP022116.1_1005705_1006017_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP022116.1_1006035_1006746_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP022116.1_1006745_1007225_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP022116.1_1007221_1008271_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP022116.1_1008251_1009013_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_002211565.1_ASM221156v1	NZ_CP022116	Salmonella enterica subsp. enterica serovar Ouakam str. SA20034636 chromosome, complete genome	4	3361073-3361177	4	CRISPRCasFinder	no		cas3,PD-DExK,DEDDh,WYL,csa3,DinG	Orphan	TTATCGGATGGTTTATCGCGTGGTTCATCGGGTGAA	36	0	0	NA	NA	NA	1	1	Orphan	cas3,PD-DExK,DEDDh,WYL,csa3,DinG	NA|61aa|up_7|NZ_CP022116.1_3357183_3357366_-,NA|79aa|up_5|NZ_CP022116.1_3357804_3358041_-,NA|134aa|up_3|NZ_CP022116.1_3358202_3358604_-,NA|87aa|down_0|NZ_CP022116.1_3361589_3361850_-,NA|348aa|down_4|NZ_CP022116.1_3363328_3364372_+,NA|103aa|down_6|NZ_CP022116.1_3365088_3365397_+,NA|67aa|down_8|NZ_CP022116.1_3366530_3366731_+	NA|260aa|up_9|NZ_CP022116.1_3356007_3356787_-	pfam03589, Antiterm, Antitermination protein	NA|81aa|up_8|NZ_CP022116.1_3356944_3357187_-	pfam13852, DUF4197, Protein of unknown function (DUF4197)	NA|61aa|up_7|NZ_CP022116.1_3357183_3357366_-	NA	NA|157aa|up_6|NZ_CP022116.1_3357353_3357824_-	cd15823, SPRY_PRY_TRIM6, PRY/SPRY domain in tripartite motif-binding protein 6 (TRIM6), also known as RING finger protein 89 (RNF89)	NA|79aa|up_5|NZ_CP022116.1_3357804_3358041_-	NA	NA|59aa|up_4|NZ_CP022116.1_3358033_3358210_-	pfam05810, NinF, NinF protein	NA|134aa|up_3|NZ_CP022116.1_3358202_3358604_-	NA	NA|59aa|up_2|NZ_CP022116.1_3358606_3358783_-	pfam05322, NinE, NINE Protein	NA|147aa|up_1|NZ_CP022116.1_3358779_3359220_-	pfam05772, NinB, NinB protein	NA|459aa|up_0|NZ_CP022116.1_3359293_3360670_-	TIGR00665, DnaB, replicative DNA helicase	NA|87aa|down_0|NZ_CP022116.1_3361589_3361850_-	NA	NA|94aa|down_1|NZ_CP022116.1_3361886_3362168_-	pfam05269, Phage_CII, Bacteriophage CII protein	NA|72aa|down_2|NZ_CP022116.1_3362278_3362494_-	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT	NA|230aa|down_3|NZ_CP022116.1_3362604_3363294_+	COG2932, COG2932, Predicted transcriptional regulator [Transcription]	NA|348aa|down_4|NZ_CP022116.1_3363328_3364372_+	NA	NA|70aa|down_5|NZ_CP022116.1_3364515_3364725_-	PRK10292, PRK10292, fumarate hydratase FumD	NA|103aa|down_6|NZ_CP022116.1_3365088_3365397_+	NA	NA|328aa|down_7|NZ_CP022116.1_3365478_3366462_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|67aa|down_8|NZ_CP022116.1_3366530_3366731_+	NA	NA|105aa|down_9|NZ_CP022116.1_3366882_3367197_+	PHA01516, PHA01516, hypothetical protein
