The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	0	14363	2578483		Catovirus(14.29%)	9	NA	NA
WP_011303653.1|1756_2704_+	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	23.6	1.5e-11
WP_069795416.1|2874_3423_-	5'(3')-deoxyribonucleotidase	NA	A0A0A0PKY7	Bacillus_phage	38.4	5.9e-29
WP_011303654.1|3600_4656_-	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	27.2	2.3e-21
WP_002483939.1|4814_6332_-	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA	NA
WP_011303655.1|6328_7291_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.5	4.8e-26
WP_011303656.1|7596_9375_-	DNA helicase RecQ	NA	M1PGQ0	Moumouvirus	36.8	5.9e-78
WP_011303657.1|9388_11272_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	30.4	1.1e-53
WP_061050312.1|11384_12203_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_011303659.1|12422_14363_-	polyglycerol-phosphate lipoteichoic acid synthase LtaS	NA	W6LM83	Streptococcus_phage	39.1	5.0e-107
>prophage 2
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	17678	25228	2578483		Pandoravirus(16.67%)	9	NA	NA
WP_011303663.1|17678_18821_-	aminodeoxychorismate synthase component I	NA	S4VNU7	Pandoravirus	36.7	5.4e-24
WP_011303664.1|18804_19398_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	41.5	1.9e-36
WP_002483950.1|19653_20325_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	54.9	1.2e-63
WP_011303665.1|20326_20752_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_002483952.1|20744_21461_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.4	2.5e-51
WP_011303666.1|21701_22295_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002483954.1|22363_22615_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_011303667.1|22832_23894_-	glycosyltransferase family 2 protein	NA	A0A192Y8W7	Salmonella_phage	42.3	8.7e-61
WP_002483956.1|24388_25228_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	40.2	1.2e-52
>prophage 3
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	32940	33810	2578483		Bacillus_phage(100.0%)	1	NA	NA
WP_011303674.1|32940_33810_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	51.5	1.9e-77
>prophage 4
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	40904	50187	2578483		Indivirus(25.0%)	9	NA	NA
WP_011303681.1|40904_41813_-	aldo/keto reductase	NA	A0A1V0SDE7	Indivirus	25.9	1.1e-11
WP_011303682.1|41846_42773_-	GTP-binding protein	NA	NA	NA	NA	NA
WP_011303683.1|42999_43443_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_069795418.1|43651_45331_-	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	23.4	1.5e-14
WP_069795419.1|45327_46959_-	ABC transporter ATP-binding protein/permease	NA	A0A2K9L0W2	Tupanvirus	29.9	5.0e-15
WP_002483975.1|47238_48114_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
WP_047502760.1|48447_49149_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002483977.1|49153_49618_+	YaiI/YqxD family protein	NA	NA	NA	NA	NA
WP_047502763.1|49620_50187_+	TIGR00730 family Rossman fold protein	NA	A0A1G5S9X4	Enterococcus_phage	36.2	8.3e-18
>prophage 5
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	60960	62834	2578483		uncultured_virus(50.0%)	2	NA	NA
WP_011303699.1|60960_62073_+	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	A0A218MNE0	uncultured_virus	42.9	6.7e-80
WP_069795421.1|62327_62834_-	cupin domain-containing protein	NA	A0A291ATU0	Pandoravirus	35.0	6.9e-16
>prophage 6
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	75266	76298	2578483		Acanthamoeba_polyphaga_mimivirus(100.0%)	1	NA	NA
WP_011303712.1|75266_76298_-	alpha/beta hydrolase	NA	A0A0G2Y6Q1	Acanthamoeba_polyphaga_mimivirus	26.0	2.8e-16
>prophage 7
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	82576	90599	2578483		Klosneuvirus(25.0%)	6	NA	NA
WP_002484014.1|82576_83380_-	ABC transporter ATP-binding protein	NA	A0A1V0SJ29	Klosneuvirus	28.6	1.1e-15
WP_069795425.1|83696_84533_-	YitT family protein	NA	M1Q1P6	Streptococcus_phage	35.5	3.8e-43
WP_011303719.1|85182_86412_-	nucleoside permease	NA	NA	NA	NA	NA
WP_061050328.1|86797_88516_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	40.9	1.1e-108
WP_011303721.1|88740_90036_+	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA	NA
WP_002484019.1|90200_90599_-	glycerol-3-phosphate cytidylyltransferase	NA	A0A222YWT0	Streptomyces_phage	39.9	1.7e-17
>prophage 8
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	98061	98784	2578483		Cedratvirus(100.0%)	1	NA	NA
WP_069795427.1|98061_98784_+	metal ABC transporter ATP-binding protein	NA	A0A1M7XV31	Cedratvirus	27.7	1.9e-11
>prophage 9
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	124992	128682	2578483		Cafeteria_roenbergensis_virus(50.0%)	4	NA	NA
WP_172606394.1|124992_126312_-	HD domain-containing protein	NA	E3T4P8	Cafeteria_roenbergensis_virus	28.8	9.9e-22
WP_011303754.1|126330_126810_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011303755.1|126943_127486_-	flavodoxin family protein	NA	NA	NA	NA	NA
WP_011303756.1|127746_128682_-	aldo/keto reductase	NA	A0A1V0SDE7	Indivirus	23.1	3.7e-07
>prophage 10
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	142596	143253	2578483		Elephant_endotheliotropic_herpesvirus(100.0%)	1	NA	NA
WP_047502838.1|142596_143253_-	uracil-DNA glycosylase	NA	U5U481	Elephant_endotheliotropic_herpesvirus	47.2	8.3e-46
>prophage 11
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	148404	149817	2578483		Burkholderia_virus(100.0%)	1	NA	NA
WP_011303778.1|148404_149817_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	32.2	5.0e-56
>prophage 12
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	161397	162060	2578483		Enterococcus_phage(100.0%)	1	NA	NA
WP_011303790.1|161397_162060_+	deoxynucleoside kinase	NA	A0A0M3UL55	Enterococcus_phage	34.1	2.4e-24
>prophage 13
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	184490	185273	2578483		Escherichia_phage(100.0%)	1	NA	NA
WP_002484122.1|184490_185273_+	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	28.2	7.4e-17
>prophage 14
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	189590	190388	2578483		Salmonella_phage(100.0%)	1	NA	NA
WP_103314639.1|189590_190388_-	class A beta-lactamase	NA	A0A1B0VBP7	Salmonella_phage	35.4	8.9e-34
>prophage 15
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	212056	215337	2578483		Catovirus(50.0%)	3	NA	NA
WP_105577615.1|212056_213856_-	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	29.9	1.5e-28
WP_069795463.1|213880_214648_-	capsular biosynthesis protein	NA	NA	NA	NA	NA
WP_069795464.1|214650_215337_-	tyrosine-protein kinase	NA	A0A1X9I5D6	Streptococcus_phage	34.7	1.5e-26
>prophage 16
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	218727	219918	2578483		Emiliania_huxleyi_virus(100.0%)	1	NA	NA
WP_061050378.1|218727_219918_-	glycine C-acetyltransferase	NA	D2TEZ5	Emiliania_huxleyi_virus	31.2	3.2e-43
>prophage 17
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	223083	234069	2578483		Streptococcus_phage(33.33%)	6	NA	NA
WP_011303836.1|223083_225174_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	27.4	1.3e-63
WP_002484155.1|225293_225764_-	30S ribosomal protein S7	NA	NA	NA	NA	NA
WP_002484156.1|225834_226248_-	30S ribosomal protein S12	NA	NA	NA	NA	NA
WP_011303837.1|226342_226597_-	ribosomal L7Ae/L30e/S12e/Gadd45 family protein	NA	NA	NA	NA	NA
WP_002484158.1|226754_230351_-	DNA-directed RNA polymerase subunit beta'	NA	R4TQM7	Phaeocystis_globosa_virus	24.7	2.8e-66
WP_011303839.1|230517_234069_-	DNA-directed RNA polymerase subunit beta	NA	A0A1B1ISA9	uncultured_Mediterranean_phage	23.1	1.5e-48
>prophage 18
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	238134	242993	2578483	tRNA	Bacillus_virus(50.0%)	8	NA	NA
WP_011303841.1|238134_238683_-	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	32.9	3.8e-12
WP_011303842.1|238697_238877_-	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
WP_011303843.1|239005_239149_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_011303844.1|239279_239855_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_011303845.1|239929_240451_-	NYN domain-containing protein	NA	NA	NA	NA	NA
WP_002484171.1|240447_241197_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_011303846.1|241204_241591_-	Mini-ribonuclease 3	NA	NA	NA	NA	NA
WP_069795467.1|241592_242993_-|tRNA	cysteine--tRNA ligase	tRNA	A0A1V0SAQ2	Catovirus	30.8	5.9e-57
>prophage 19
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	248674	251137	2578483	protease	Enterobacteria_phage(100.0%)	1	NA	NA
WP_011303851.1|248674_251137_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	40.3	5.8e-132
>prophage 20
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	256179	257559	2578483		Streptococcus_phage(100.0%)	1	NA	NA
WP_011303858.1|256179_257559_+	PLP-dependent aminotransferase family protein	NA	A0A1X9I5H2	Streptococcus_phage	24.4	1.5e-20
>prophage 21
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	269556	279814	2578483	protease,tRNA	Catovirus(20.0%)	9	NA	NA
WP_011303859.1|269556_271044_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	40.6	5.1e-91
WP_011303860.1|271566_272046_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_011303861.1|272042_272411_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_011303862.1|272388_273192_-	dihydropteroate synthase	NA	NA	NA	NA	NA
WP_002484190.1|273413_274346_-	cysteine synthase A	NA	A0A1X9I5F1	Streptococcus_phage	63.7	1.0e-105
WP_002484191.1|274501_275383_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA	NA
WP_011303863.1|275589_277680_-|protease	ATP-dependent zinc metalloprotease FtsH	protease	H8ZJI5	Ostreococcus_tauri_virus	49.0	4.2e-107
WP_011303864.1|277974_278514_-	hypoxanthine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	29.8	1.4e-11
WP_011303865.1|278518_279814_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	M1I2W1	Paramecium_bursaria_Chlorella_virus	24.3	1.1e-09
>prophage 22
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	289000	293713	2578483		Hokovirus(50.0%)	5	NA	NA
WP_011303871.1|289000_289966_-	ribose-phosphate diphosphokinase	NA	A0A1V0SHF7	Hokovirus	35.5	1.5e-48
WP_011303872.1|290113_291469_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA	NA	NA	NA	NA
WP_011303873.1|292124_292430_-	septation regulator SpoVG	NA	NA	NA	NA	NA
WP_002484206.1|292494_292869_-	RidA family protein	NA	NA	NA	NA	NA
WP_002484207.1|292888_293713_-	pur operon repressor	NA	A0A1V0SKE5	Klosneuvirus	25.3	3.0e-08
>prophage 23
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	297671	300794	2578483	tRNA	Klosneuvirus(50.0%)	2	NA	NA
WP_011303878.1|297671_299648_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	36.4	1.5e-93
WP_002484214.1|299957_300794_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	48.0	9.9e-60
>prophage 24
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	304463	305081	2578483		Streptococcus_phage(100.0%)	1	NA	NA
WP_069795165.1|304463_305081_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	48.3	1.3e-45
>prophage 25
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	313612	315915	2578483		Streptococcus_virus(50.0%)	2	NA	NA
WP_047505357.1|313612_315325_-	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	41.9	9.7e-54
WP_069795246.1|315384_315915_-	N-acetyltransferase	NA	A0A1P8CWJ6	Bacillus_phage	39.4	2.6e-29
>prophage 26
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	330059	334795	2578483		Ostreococcus_tauri_virus(33.33%)	5	NA	NA
WP_011303890.1|330059_331304_-	ammonium transporter	NA	H8ZJB2	Ostreococcus_tauri_virus	30.9	4.9e-39
WP_069795053.1|331414_332296_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_048787406.1|332496_332775_+	hypothetical protein	NA	NA	NA	NA	NA
WP_069795052.1|332868_333852_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A0A7NU10	Lactobacillus_phage	42.6	8.7e-23
WP_069793536.1|334015_334795_-	arylamine N-acetyltransferase	NA	L7RDD0	Acanthamoeba_polyphaga_moumouvirus	28.0	7.7e-06
>prophage 27
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	345992	348745	2578483		Staphylococcus_phage(50.0%)	3	NA	NA
WP_069795244.1|345992_346727_+	poly-gamma-glutamate hydrolase family protein	NA	A0A0D3MVF0	Staphylococcus_phage	42.6	4.5e-40
WP_047505317.1|346792_348007_-	MFS transporter	NA	NA	NA	NA	NA
WP_069795243.1|348232_348745_-	GrpB family protein	NA	A0A2K5B2B6	Erysipelothrix_phage	56.0	3.1e-48
>prophage 28
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	352771	352972	2578483		Lactococcus_phage(100.0%)	1	NA	NA
WP_011303913.1|352771_352972_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	66.2	1.7e-18
>prophage 29
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	361545	378036	2578483	terminase,integrase	uncultured_Caudovirales_phage(30.77%)	21	359485:359500	375005:375020
359485:359500	attL	ATTATTCCCACTCGAT	NA	NA	NA	NA
WP_069794941.1|361545_361965_-	FosB/FosD family fosfomycin resistance bacillithiol transferase	NA	Q2LI91	Bacillus_phage	63.2	1.2e-37
WP_069794940.1|362255_362612_+	glyoxalase	NA	NA	NA	NA	NA
WP_069794939.1|362678_363089_-	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	69.1	3.1e-51
WP_041079981.1|363202_363934_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(44)v	NA	E4ZFQ0	Streptococcus_phage	49.4	4.1e-62
WP_041079932.1|364104_364437_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_069794509.1|364433_364712_-	hypothetical protein	NA	A0A2H4JEA5	uncultured_Caudovirales_phage	46.7	1.8e-18
WP_069794505.1|364756_365293_-	pathogenicity island protein	NA	A0A2H4JB26	uncultured_Caudovirales_phage	50.3	6.0e-42
WP_041079930.1|365318_365792_-|terminase	phage terminase small subunit P27 family	terminase	A0A2H4JB21	uncultured_Caudovirales_phage	72.6	3.7e-56
WP_105577619.1|366916_367390_-	hypothetical protein	NA	A0A1W6JPF7	Staphylococcus_phage	38.9	3.0e-29
WP_069793695.1|367405_368023_-	hypothetical protein	NA	A0A1W6JPC6	Staphylococcus_phage	54.5	2.7e-54
WP_041079926.1|368036_368243_-	hypothetical protein	NA	NA	NA	NA	NA
WP_069793698.1|368327_368570_-	hypothetical protein	NA	NA	NA	NA	NA
WP_105577620.1|369158_371495_-	DNA primase	NA	A0A2H4JCU9	uncultured_Caudovirales_phage	38.5	2.1e-123
WP_105577621.1|371583_371892_-	hypothetical protein	NA	NA	NA	NA	NA
WP_105577622.1|371893_372073_-	hypothetical protein	NA	NA	NA	NA	NA
WP_105577623.1|372121_372382_-	hypothetical protein	NA	NA	NA	NA	NA
WP_105577624.1|372382_372628_-	hypothetical protein	NA	NA	NA	NA	NA
WP_105577625.1|372760_373687_+	helix-turn-helix transcriptional regulator	NA	Q9AZH9	Lactococcus_phage	35.2	3.3e-16
WP_105577626.1|373775_374912_+|integrase	site-specific integrase	integrase	Q938N9	Temperate_phage	42.9	4.6e-68
WP_002484263.1|375005_376547_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	31.6	1.8e-22
375005:375020	attR	ATTATTCCCACTCGAT	NA	NA	NA	NA
WP_069795242.1|376569_378036_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.7	1.2e-97
>prophage 30
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	386694	389619	2578483		Clostridium_phage(50.0%)	3	NA	NA
WP_069795241.1|386694_387057_+	helix-turn-helix domain-containing protein	NA	A0A0A7RUJ5	Clostridium_phage	40.6	2.7e-06
WP_002484274.1|387509_388079_+	peroxiredoxin	NA	NA	NA	NA	NA
WP_069795021.1|388095_389619_+	alkyl hydroperoxide reductase subunit F	NA	A0A249XZT7	Enterococcus_phage	34.9	2.4e-43
>prophage 31
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	398185	413493	2578483		uncultured_Caudovirales_phage(33.33%)	23	NA	NA
WP_047505252.1|398185_399508_-	FAD-containing oxidoreductase	NA	A0A2K5B2C5	Erysipelothrix_phage	48.6	6.9e-108
WP_047505249.1|399494_399929_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_047505246.1|400100_400505_-	SRPBCC domain-containing protein	NA	NA	NA	NA	NA
WP_047505244.1|400691_401066_+	VOC family protein	NA	NA	NA	NA	NA
WP_011303947.1|401432_402179_+	poly-gamma-glutamate hydrolase family protein	NA	A0A2H4JHA0	uncultured_Caudovirales_phage	43.4	1.3e-39
WP_048787280.1|402318_403623_+	potassium transporter KtrB	NA	NA	NA	NA	NA
WP_041079834.1|404183_404594_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_011303951.1|404624_404768_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011303952.1|404838_406137_-	LysM peptidoglycan-binding domain-containing protein	NA	M1HNA7	Bacillus_virus	52.0	1.6e-16
WP_011303953.1|406334_406523_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048787279.1|406723_407338_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
WP_176720153.1|407379_407778_-	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_011303956.1|407819_408164_-	DUF4260 domain-containing protein	NA	NA	NA	NA	NA
WP_069795015.1|408365_408704_+	DUF4870 domain-containing protein	NA	A0A2H4J741	uncultured_Caudovirales_phage	45.1	2.5e-09
WP_011303958.1|408758_409172_+	YxeA family protein	NA	NA	NA	NA	NA
WP_011303959.1|409315_409588_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011303963.1|410406_410613_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011303964.1|410637_410859_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162835602.1|410873_411014_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002484306.1|411136_411379_-	30S ribosomal protein S18	NA	NA	NA	NA	NA
WP_002484307.1|411428_411941_-	single-stranded DNA-binding protein	NA	A0A1W6JPL9	Staphylococcus_phage	68.2	6.3e-57
WP_011303966.1|411959_412265_-	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_047505216.1|412686_413493_+	lysozyme	NA	A0A2P0ZKX1	Lactobacillus_phage	41.3	2.6e-33
>prophage 32
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	423572	433539	2578483		Staphylococcus_phage(75.0%)	9	NA	NA
WP_011303974.1|423572_424865_-	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	80.5	3.3e-187
WP_069795239.1|424864_425179_-	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	71.2	1.2e-37
WP_011303976.1|425392_425956_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_011303977.1|426029_426494_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011303978.1|426674_427139_-	DUF805 domain-containing protein	NA	NA	NA	NA	NA
WP_047505197.1|427419_428031_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011303980.1|428099_429671_-	AMP-binding protein	NA	A0A2H4PQU7	Staphylococcus_phage	33.5	4.0e-70
WP_047505194.1|430179_431583_+	multidrug efflux MFS transporter	NA	NA	NA	NA	NA
WP_069793577.1|432513_433539_-	NAD-dependent formate dehydrogenase	NA	A0A1V0SBV6	Catovirus	33.3	1.0e-29
>prophage 33
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	437280	439092	2578483		Freshwater_phage(50.0%)	2	NA	NA
WP_011303992.1|437280_437895_-	adenylyl-sulfate kinase	NA	A0A1B0XTK9	Freshwater_phage	38.6	2.6e-09
WP_011303993.1|437913_439092_-	sulfate adenylyltransferase	NA	A0A2K9L4R9	Tupanvirus	31.8	1.4e-51
>prophage 34
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	449364	451931	2578483		Gordonia_phage(50.0%)	2	NA	NA
WP_011304002.1|449364_450213_-	ParB/RepB/Spo0J family partition protein	NA	A0A1C9EHW0	Gordonia_phage	29.3	2.1e-09
WP_002484347.1|450827_451931_+	PLP-dependent transferase	NA	A0A0B5JD48	Pandoravirus	27.0	2.1e-09
>prophage 35
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	467869	469396	2578483		Staphylococcus_phage(100.0%)	1	NA	NA
WP_069795228.1|467869_469396_-	acyl--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	26.3	2.0e-34
>prophage 36
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	475084	475918	2578483		Staphylococcus_phage(100.0%)	1	NA	NA
WP_069795225.1|475084_475918_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	65.0	1.3e-104
>prophage 37
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	483047	483887	2578483		Gordonia_phage(100.0%)	1	NA	NA
WP_002481957.1|483047_483887_-	ParB/RepB/Spo0J family partition protein	NA	A0A1C9EHY8	Gordonia_phage	33.1	8.0e-09
>prophage 38
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	494113	503172	2578483	tRNA	Bacillus_virus(50.0%)	5	NA	NA
WP_172606401.1|494113_496048_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	44.9	5.1e-144
WP_069795221.1|496083_498786_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	34.8	1.4e-115
WP_069795002.1|498848_499661_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
WP_011302015.1|500057_501557_+	histidine ammonia-lyase	NA	A0A1V0S940	Catovirus	40.5	8.2e-97
WP_011302016.1|501888_503172_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	43.6	5.4e-89
>prophage 39
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	509411	513692	2578483		Streptococcus_phage(33.33%)	3	NA	NA
WP_037537355.1|509411_510812_+	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	48.6	1.1e-111
WP_002481979.1|511107_512391_+	adenylosuccinate synthase	NA	A0A2P1EKE7	Megavirus	35.3	9.5e-70
WP_069794999.1|512480_513692_-	glycosyltransferase	NA	Q0IKX4	Leucania_separata_nucleopolyhedrovirus	25.0	2.1e-10
>prophage 40
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	517060	522943	2578483		Bacillus_phage(66.67%)	5	NA	NA
WP_002481985.1|517060_517762_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.2	6.0e-42
WP_011302026.1|517774_519607_+	cell wall metabolism sensor histidine kinase WalK	NA	W8CYF6	Bacillus_phage	32.2	5.6e-31
WP_069795218.1|519596_520937_+	hypothetical protein	NA	NA	NA	NA	NA
WP_069795217.1|520937_521720_+	two-component system regulatory protein YycI	NA	NA	NA	NA	NA
WP_103301463.1|522142_522943_+	MBL fold metallo-hydrolase	NA	A0A0C5AJ83	Bacteriophage	38.0	2.9e-40
>prophage 41
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	532646	536047	2578483	transposase	Organic_Lake_phycodnavirus(50.0%)	4	NA	NA
WP_041784901.1|532646_533420_+	phosphonate ABC transporter ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	26.6	6.2e-08
WP_011303196.1|533421_534216_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_011303195.1|534212_535028_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_105577632.1|535090_536047_-|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	38.6	1.1e-49
>prophage 42
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	541325	555449	2578483		Bacillus_phage(25.0%)	11	NA	NA
WP_105577638.1|541325_543002_+	recombinase family protein	NA	A0A0S2SXR4	Bacillus_phage	29.2	1.6e-45
WP_065865891.1|543107_543446_+	hypothetical protein	NA	NA	NA	NA	NA
WP_053041967.1|543541_543853_+	hypothetical protein	NA	NA	NA	NA	NA
WP_056936153.1|543868_544375_+	DUF1643 domain-containing protein	NA	NA	NA	NA	NA
WP_064264395.1|544701_544905_+	hypothetical protein	NA	NA	NA	NA	NA
WP_105577639.1|544954_548077_-	type I restriction endonuclease subunit R	NA	A0A220A398	Liberibacter_phage	29.1	1.4e-66
WP_105577640.1|548060_549263_-	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_016911375.1|549252_550767_-	SAM-dependent DNA methyltransferase	NA	A0A2H4PQP4	Staphylococcus_phage	30.8	8.3e-49
WP_105577693.1|551095_551815_+	hypothetical protein	NA	NA	NA	NA	NA
WP_105577641.1|551811_552708_-	hypothetical protein	NA	NA	NA	NA	NA
WP_069819379.1|553385_555449_+	copper-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	29.7	1.5e-64
>prophage 43
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	561708	563722	2578483		Staphylococcus_phage(100.0%)	3	NA	NA
WP_069795211.1|561708_562101_-	arsenate reductase (thioredoxin)	NA	A0A2H4PQT9	Staphylococcus_phage	81.5	2.1e-57
WP_164971292.1|562118_563411_-	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	81.4	2.8e-186
WP_040030669.1|563407_563722_-	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	A0A2H4PQT4	Staphylococcus_phage	74.0	4.7e-39
>prophage 44
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	569494	571504	2578483		Tupanvirus(100.0%)	1	NA	NA
WP_069795210.1|569494_571504_+	catalase	NA	A0A2K9L572	Tupanvirus	47.0	2.5e-141
>prophage 45
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	588818	590192	2578483		Organic_Lake_phycodnavirus(100.0%)	1	NA	NA
WP_047502986.1|588818_590192_+	deoxyribodipyrimidine photo-lyase	NA	F2Y1V1	Organic_Lake_phycodnavirus	31.6	2.8e-43
>prophage 46
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	604513	605752	2578483		Streptococcus_phage(100.0%)	1	NA	NA
WP_048787137.1|604513_605752_+	DNA (cytosine-5-)-methyltransferase	NA	A0A1S5SFL7	Streptococcus_phage	28.6	7.8e-29
>prophage 47
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	630762	637798	2578483		Planktothrix_phage(33.33%)	6	NA	NA
WP_011302090.1|630762_631425_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.4	4.2e-29
WP_069795182.1|631497_631905_+	YbgA family protein	NA	NA	NA	NA	NA
WP_011302092.1|632177_633482_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_011302093.1|633647_634376_-	NAD-dependent protein deacylase	NA	A0A2I2L319	Orpheovirus	32.2	6.0e-13
WP_011302094.1|634582_635449_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_103301649.1|637195_637798_+	CatB-related O-acetyltransferase	NA	M1HKK6	Paramecium_bursaria_Chlorella_virus	42.7	6.1e-19
>prophage 48
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	645092	651163	2578483		Herpes_simplex_virus(50.0%)	3	NA	NA
WP_063488883.1|645092_648071_+	beta-galactosidase	NA	L0N6M2	Herpes_simplex_virus	29.9	4.2e-129
WP_011302107.1|648293_650039_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_011302108.1|650215_651163_+	glycosyltransferase family 2 protein	NA	F1C5B0	Cronobacter_phage	42.0	2.9e-60
>prophage 49
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	656541	658262	2578483		Clostridium_phage(50.0%)	2	NA	NA
WP_048787113.1|656541_657009_-	helix-turn-helix domain-containing protein	NA	A0A0A7S0F1	Clostridium_phage	42.0	4.9e-08
WP_002482062.1|657497_658262_+	2,4-dienoyl-CoA reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	30.8	1.7e-13
>prophage 50
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	673421	674150	2578483		Staphylococcus_phage(100.0%)	1	NA	NA
WP_069795500.1|673421_674150_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.5	6.7e-28
>prophage 51
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	689895	693356	2578483		Enterococcus_phage(33.33%)	3	NA	NA
WP_011302142.1|689895_691746_+	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	63.8	4.6e-235
WP_011302143.1|691742_692279_+	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	L7TIP4	Escherichia_phage	40.1	5.4e-27
WP_011302144.1|692360_693356_+	choloylglycine hydrolase family protein	NA	M1HS66	Paramecium_bursaria_Chlorella_virus	28.8	1.3e-26
>prophage 52
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	699550	700363	2578483		Ostreococcus_lucimarinus_virus(100.0%)	1	NA	NA
WP_011302152.1|699550_700363_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	M4QNT1	Ostreococcus_lucimarinus_virus	36.2	6.5e-40
>prophage 53
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	715194	715545	2578483		Brochothrix_phage(100.0%)	1	NA	NA
WP_011302165.1|715194_715545_+	DUF4064 domain-containing protein	NA	D7RWL4	Brochothrix_phage	56.2	2.3e-10
>prophage 54
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	720837	729824	2578483		Enterococcus_phage(33.33%)	6	NA	NA
WP_011302171.1|720837_721596_-	nickel pincer cofactor biosynthesis protein LarB	NA	A0A288TYA6	Enterococcus_phage	44.2	2.2e-21
WP_048787104.1|721617_722442_-	ATP-dependent sacrificial sulfur transferase LarE	NA	NA	NA	NA	NA
WP_064205598.1|722457_723720_-	nickel-dependent lactate racemase	NA	NA	NA	NA	NA
WP_069795171.1|723783_724941_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	36.1	9.9e-42
WP_037537494.1|725072_726152_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_061050455.1|727190_729824_+	pyruvate, phosphate dikinase	NA	A0A2I7RQW7	Vibrio_phage	40.9	3.9e-94
>prophage 55
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	736966	738280	2578483		Klosneuvirus(100.0%)	1	NA	NA
WP_069795174.1|736966_738280_+	4-aminobutyrate--2-oxoglutarate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	1.2e-30
>prophage 56
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	742593	750604	2578483	holin	Prochlorococcus_phage(33.33%)	6	NA	NA
WP_011302185.1|742593_743484_-	fructose bisphosphate aldolase	NA	A0A0K0KVJ8	Prochlorococcus_phage	26.8	1.0e-06
WP_105577645.1|743609_744332_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_011302187.1|744816_746439_+	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	23.1	4.8e-18
WP_002482146.1|746608_747169_-	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011302188.1|747371_748865_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_002482148.1|748921_750604_+|holin	choline dehydrogenase	holin	A0A1V0SI18	Klosneuvirus	33.4	2.5e-62
>prophage 57
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	758208	762029	2578483		Staphylococcus_phage(50.0%)	3	NA	NA
WP_069795176.1|758208_759261_+	CapA family protein	NA	A0A0N9SJ77	Staphylococcus_phage	49.7	7.2e-100
WP_069795177.1|759356_760298_-	nucleoside hydrolase	NA	NA	NA	NA	NA
WP_047504738.1|760631_762029_+	MFS transporter	NA	Q6JIH2	Burkholderia_virus	29.9	8.2e-51
>prophage 58
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	765922	772251	2578483	transposase	Anomala_cuprea_entomopoxvirus(25.0%)	6	NA	NA
WP_105577646.1|765922_766234_+	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	36.1	2.3e-09
WP_001105987.1|766261_766936_-|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	99.6	6.8e-128
WP_011303362.1|767126_767768_+	3-hexulose-6-phosphate synthase	NA	NA	NA	NA	NA
WP_011303361.1|767923_768442_+	type 1 glutamine amidotransferase	NA	NA	NA	NA	NA
WP_069795497.1|768699_770961_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	35.8	3.3e-102
WP_011303359.1|771102_772251_-	alcohol dehydrogenase catalytic domain-containing protein	NA	A0A2L2DIY2	Acanthamoeba_polyphaga_mimivirus	27.3	2.2e-09
>prophage 59
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	779697	781185	2578483		Salisaeta_icosahedral_phage(50.0%)	2	NA	NA
WP_011304040.1|779697_780249_+	recombinase family protein	NA	I1ZBD6	Salisaeta_icosahedral_phage	41.0	2.9e-31
WP_011304039.1|780297_781185_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	21.0	2.2e-09
>prophage 60
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	784850	786968	2578483		Staphylococcus_phage(100.0%)	1	NA	NA
WP_063489142.1|784850_786968_-	amidase domain-containing protein	NA	A0A249Y1A9	Staphylococcus_phage	45.8	4.3e-11
>prophage 61
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	797625	798300	2578483	transposase	Staphylococcus_phage(100.0%)	1	NA	NA
WP_001105987.1|797625_798300_-|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	99.6	6.8e-128
>prophage 62
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	802886	804071	2578483		Klosneuvirus(100.0%)	1	NA	NA
WP_069794865.1|802886_804071_+	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	30.5	3.0e-38
>prophage 63
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	827029	827761	2578483		Bacillus_virus(100.0%)	1	NA	NA
WP_002482190.1|827029_827761_+	amino acid ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.4	1.8e-25
>prophage 64
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	834378	836791	2578483		Pandoravirus(50.0%)	2	NA	NA
WP_011302240.1|834378_835668_-	homocysteine synthase	NA	A0A0B5JD48	Pandoravirus	23.5	3.1e-12
WP_069795076.1|835885_836791_+	cysteine synthase family protein	NA	A0A1W6JIM2	Lactococcus_phage	37.5	6.7e-46
>prophage 65
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	851391	852081	2578483		Bacillus_virus(100.0%)	1	NA	NA
WP_011302257.1|851391_852081_+	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	27.4	2.0e-13
>prophage 66
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	861667	862450	2578483	protease	Staphylococcus_phage(100.0%)	1	NA	NA
WP_011302266.1|861667_862450_+|protease	serine protease	protease	A0A2H4PQN3	Staphylococcus_phage	36.0	9.7e-17
>prophage 67
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	866969	882780	2578483		Staphylococcus_phage(25.0%)	14	NA	NA
WP_011302272.1|866969_867554_+	M23 family metallopeptidase	NA	G4KNQ9	Staphylococcus_phage	43.1	7.2e-17
WP_069795084.1|867729_868395_-	DNA-3-methyladenine glycosylase 2 family protein	NA	NA	NA	NA	NA
WP_011302274.1|868405_868759_-	DUF488 domain-containing protein	NA	NA	NA	NA	NA
WP_011302275.1|868890_869319_+	6-carboxytetrahydropterin synthase	NA	J9PV91	Bacillus_phage	32.4	4.6e-13
WP_011302276.1|869832_870876_+	PTS transporter subunit IIC	NA	NA	NA	NA	NA
WP_011302277.1|871400_872132_+	transglycosylase SLT domain-containing protein	NA	A0A0D3MVN5	Staphylococcus_phage	30.7	7.9e-13
WP_011302278.1|872399_873557_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_011302279.1|873582_874581_+	D-lactate dehydrogenase	NA	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	31.2	1.5e-38
WP_011302280.1|874631_874838_-	copper chaperone CopZ	NA	NA	NA	NA	NA
WP_011302281.1|874883_877268_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	41.7	1.5e-132
WP_011302282.1|877442_878894_-	SulP family inorganic anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	49.2	6.2e-118
WP_011302283.1|879093_879855_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.9	6.1e-32
WP_069795085.1|879844_881740_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_069795086.1|881910_882780_+	SDR family oxidoreductase	NA	A0A2N9QUX2	Trichoplusia_ni_ascovirus	43.3	8.4e-54
>prophage 68
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	905665	908315	2578483		uncultured_Caudovirales_phage(33.33%)	3	NA	NA
WP_002482277.1|905665_905938_-	YrhK family protein	NA	A0A2H4IYD3	uncultured_Caudovirales_phage	46.2	3.5e-06
WP_011302302.1|906058_906592_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	46.5	1.7e-36
WP_174604974.1|906725_908315_+	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	23.6	1.2e-21
>prophage 69
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	913675	914107	2578483		Staphylococcus_phage(100.0%)	1	NA	NA
WP_011302307.1|913675_914107_-	CHAP domain-containing protein	NA	A0A1X9I9L1	Staphylococcus_phage	39.1	6.1e-13
>prophage 70
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	918280	924024	2578483		Yellowstone_lake_phycodnavirus(50.0%)	3	NA	NA
WP_105577652.1|918280_920023_+	pyruvate oxidase	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	24.0	5.1e-34
WP_011302313.1|920356_921751_+	YfcC family protein	NA	NA	NA	NA	NA
WP_069794880.1|921987_924024_+	PTS transporter subunit EIIC	NA	A0A2I7SAJ6	Vibrio_phage	43.1	1.3e-07
>prophage 71
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	938045	939383	2578483		Klosneuvirus(100.0%)	1	NA	NA
WP_011302330.1|938045_939383_-	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	28.2	2.5e-20
>prophage 72
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	943544	948223	2578483		Catovirus(50.0%)	4	NA	NA
WP_011302334.1|943544_945269_+	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	38.9	5.4e-12
WP_002482316.1|945453_946038_+	MptD family putative ECF transporter S component	NA	NA	NA	NA	NA
WP_069795096.1|946039_946759_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_069795097.1|946768_948223_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.3	6.0e-12
>prophage 73
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	954668	955739	2578483		Moumouvirus(100.0%)	1	NA	NA
WP_069794883.1|954668_955739_+	NAD(P)-dependent alcohol dehydrogenase	NA	A0A2P1ELD9	Moumouvirus	27.9	2.9e-19
>prophage 74
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	971289	974827	2578483		Bacillus_phage(100.0%)	2	NA	NA
WP_069794890.1|971289_973071_+	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	29.8	1.9e-44
WP_041079312.1|973063_974827_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.6	6.7e-50
>prophage 75
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1009122	1009827	2578483		Moumouvirus(100.0%)	1	NA	NA
WP_002482377.1|1009122_1009827_+	SDR family oxidoreductase	NA	M1NMS3	Moumouvirus	25.8	1.4e-06
>prophage 76
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1015411	1016416	2578483		Pacmanvirus(100.0%)	1	NA	NA
WP_011302396.1|1015411_1016416_-	histidinol-phosphate aminotransferase family protein	NA	A0A1X6WGT4	Pacmanvirus	21.9	1.5e-09
>prophage 77
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1026648	1027467	2578483		Hirudovirus(100.0%)	1	NA	NA
WP_069795128.1|1026648_1027467_+	SDR family oxidoreductase	NA	V5L4T3	Hirudovirus	30.9	2.8e-06
>prophage 78
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1032169	1032820	2578483		Bacillus_virus(100.0%)	1	NA	NA
WP_002482400.1|1032169_1032820_+	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	36.7	3.1e-24
>prophage 79
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1040864	1042049	2578483	holin	Mycoplasma_phage(100.0%)	1	NA	NA
WP_002482409.1|1040864_1042049_+|holin	betaine/proline/choline family ABC transporter ATP-binding protein	holin	Q6GZ03	Mycoplasma_phage	37.0	8.3e-20
>prophage 80
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1048490	1049231	2578483		Bacillus_virus(100.0%)	1	NA	NA
WP_002482417.1|1048490_1049231_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	42.1	2.6e-40
>prophage 81
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1052341	1054117	2578483		Enterobacteria_phage(100.0%)	1	NA	NA
WP_011302423.1|1052341_1054117_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	30.3	5.9e-62
>prophage 82
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1070653	1071022	2578483		Staphylococcus_phage(100.0%)	1	NA	NA
WP_011302440.1|1070653_1071022_-	hypothetical protein	NA	A0A2R3ZXP9	Staphylococcus_phage	55.7	5.7e-20
>prophage 83
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1099318	1099894	2578483		Staphylococcus_phage(100.0%)	1	NA	NA
WP_061050490.1|1099318_1099894_+	peptidoglycan recognition protein	NA	A0A1S6KVC6	Staphylococcus_phage	47.5	2.8e-45
>prophage 84
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1105520	1106300	2578483		Trichoplusia_ni_ascovirus(100.0%)	1	NA	NA
WP_011302475.1|1105520_1106300_+	glucose 1-dehydrogenase	NA	Q06VL0	Trichoplusia_ni_ascovirus	34.5	3.5e-19
>prophage 85
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1116587	1117619	2578483		Bacillus_virus(100.0%)	1	NA	NA
WP_002482481.1|1116587_1117619_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	26.3	2.6e-17
>prophage 86
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1131080	1133630	2578483		Bacillus_phage(50.0%)	3	NA	NA
WP_002482492.1|1131080_1131755_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	45.6	2.1e-52
WP_061050495.1|1131909_1132962_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_011302494.1|1132961_1133630_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.2	2.7e-36
>prophage 87
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1137351	1138575	2578483		Salmonella_phage(100.0%)	1	NA	NA
WP_011302498.1|1137351_1138575_+	multidrug effflux MFS transporter	NA	S4TR35	Salmonella_phage	26.6	7.5e-32
>prophage 88
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1155185	1156085	2578483		Amsacta_moorei_entomopoxvirus(100.0%)	1	NA	NA
WP_011302512.1|1155185_1156085_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	26.7	1.8e-14
>prophage 89
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1169861	1170743	2578483		Diadromus_pulchellus_ascovirus(100.0%)	1	NA	NA
WP_002482530.1|1169861_1170743_+	SDR family oxidoreductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	45.9	7.7e-63
>prophage 90
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1174383	1174605	2578483	transposase	Macacine_betaherpesvirus(100.0%)	1	NA	NA
WP_081095015.1|1174383_1174605_+|transposase	IS3 family transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	53.6	1.1e-13
>prophage 91
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1179385	1180030	2578483		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_011302533.1|1179385_1180030_+	HAD family hydrolase	NA	A7J6N1	Paramecium_bursaria_Chlorella_virus	26.5	6.5e-11
>prophage 92
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1197570	1200566	2578483		Staphylococcus_phage(50.0%)	3	NA	NA
WP_011302548.1|1197570_1198347_+	glucosaminidase domain-containing protein	NA	H9A0W8	Staphylococcus_phage	42.9	9.9e-38
WP_011302549.1|1198424_1199549_+	FAD-dependent monooxygenase	NA	NA	NA	NA	NA
WP_002482556.1|1199609_1200566_-	2-hydroxyacid dehydrogenase family protein	NA	A0A1M7XU89	Cedratvirus	31.7	2.5e-30
>prophage 93
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1214034	1214781	2578483		Anomala_cuprea_entomopoxvirus(100.0%)	1	NA	NA
WP_011302561.1|1214034_1214781_-	amino acid ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	31.1	1.5e-19
>prophage 94
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1222283	1223285	2578483		Tupanvirus(100.0%)	1	NA	NA
WP_011302570.1|1222283_1223285_+	UDP-glucose 4-epimerase GalE	NA	A0A2K9L5H6	Tupanvirus	38.1	7.0e-52
>prophage 95
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1226444	1227050	2578483		Pithovirus(100.0%)	1	NA	NA
WP_011302574.1|1226444_1227050_+	ATP-binding cassette domain-containing protein	NA	W5SAS9	Pithovirus	31.7	2.9e-13
>prophage 96
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1240868	1246965	2578483		Leptospira_phage(50.0%)	5	NA	NA
WP_011302590.1|1240868_1244042_+	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	22.3	1.6e-62
WP_011302591.1|1244387_1244705_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002482603.1|1244769_1244946_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002482604.1|1245095_1246004_+	AEC family transporter	NA	NA	NA	NA	NA
WP_011302592.1|1246173_1246965_-	glucose 1-dehydrogenase	NA	Q06VL0	Trichoplusia_ni_ascovirus	30.4	8.9e-18
>prophage 97
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1251401	1252736	2578483		Moraxella_phage(100.0%)	1	NA	NA
WP_011302596.1|1251401_1252736_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	31.9	3.3e-49
>prophage 98
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1268396	1270066	2578483		Planktothrix_phage(50.0%)	2	NA	NA
WP_011302607.1|1268396_1269206_+	energy-coupling factor transporter ATPase	NA	G9BWD6	Planktothrix_phage	31.3	2.0e-17
WP_011302608.1|1269202_1270066_+	energy-coupling factor transporter ATPase	NA	A0A2H4PQG7	Staphylococcus_phage	24.8	1.8e-11
>prophage 99
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1277256	1278831	2578483		Vibrio_phage(100.0%)	1	NA	NA
WP_011302616.1|1277256_1278831_+	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	23.1	9.4e-11
>prophage 100
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1288697	1289660	2578483		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_011302626.1|1288697_1289660_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4IY97	uncultured_Caudovirales_phage	27.4	2.2e-15
>prophage 101
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1304616	1305522	2578483		Klosneuvirus(100.0%)	1	NA	NA
WP_047503353.1|1304616_1305522_+	arginase	NA	A0A1V0SJM8	Klosneuvirus	35.4	1.1e-27
>prophage 102
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1314931	1316737	2578483		Paramecium_bursaria_Chlorella_virus(100.0%)	1	NA	NA
WP_047503342.1|1314931_1316737_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	NA	A7J689	Paramecium_bursaria_Chlorella_virus	37.4	3.4e-97
>prophage 103
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1330686	1334247	2578483		Clostridium_phage(50.0%)	4	NA	NA
WP_011302651.1|1330686_1331136_+	DNA starvation/stationary phase protection protein	NA	A0A0A7RTZ1	Clostridium_phage	51.7	4.4e-38
WP_011302652.1|1331320_1332031_-	purine-nucleoside phosphorylase	NA	NA	NA	NA	NA
WP_002482694.1|1332215_1332878_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA	NA
WP_011302654.1|1332945_1334247_+	pyrimidine-nucleoside phosphorylase	NA	A0A0H3UZD4	Geobacillus_virus	60.1	1.4e-137
>prophage 104
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1343378	1344989	2578483		Only_Syngen_Nebraska_virus(100.0%)	1	NA	NA
WP_011302663.1|1343378_1344989_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	50.4	2.2e-148
>prophage 105
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1352268	1360056	2578483		Bacillus_virus(25.0%)	9	NA	NA
WP_011302669.1|1352268_1352868_+	thymidine kinase	NA	G3MBK1	Bacillus_virus	44.1	5.6e-33
WP_002482713.1|1352867_1353944_+	peptide chain release factor 1	NA	NA	NA	NA	NA
WP_011302670.1|1353930_1354767_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_047503316.1|1354860_1355904_+	threonylcarbamoyl-AMP synthase	NA	A0A291ATS8	Pandoravirus	36.8	2.8e-43
WP_011302672.1|1355900_1356323_+	low molecular weight protein arginine phosphatase	NA	NA	NA	NA	NA
WP_047503313.1|1356468_1356993_+	TIGR01440 family protein	NA	NA	NA	NA	NA
WP_069795155.1|1357015_1358254_+	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	51.9	5.0e-100
WP_011302675.1|1358273_1358903_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_011302676.1|1358925_1360056_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	27.4	4.5e-23
>prophage 106
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1370068	1370488	2578483		Staphylococcus_phage(100.0%)	1	NA	NA
WP_011302684.1|1370068_1370488_+	single-stranded DNA-binding protein	NA	A0A1J0MFD7	Staphylococcus_phage	41.1	2.5e-19
>prophage 107
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1375900	1376575	2578483		Tunisvirus(100.0%)	1	NA	NA
WP_170178158.1|1375900_1376575_-	HD domain-containing protein	NA	V9SGZ2	Tunisvirus	31.8	7.1e-08
>prophage 108
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1383948	1385469	2578483		Diachasmimorpha_longicaudata_entomopoxvirus(100.0%)	1	NA	NA
WP_011302697.1|1383948_1385469_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	35.4	3.1e-59
>prophage 109
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1390107	1393442	2578483		Clostridium_botulinum_C_phage(50.0%)	5	NA	NA
WP_011302703.1|1390107_1390470_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	Q332J9	Clostridium_botulinum_C_phage	32.5	8.4e-08
WP_011302704.1|1390806_1391808_+	PP2C family protein-serine/threonine phosphatase	NA	NA	NA	NA	NA
WP_011302705.1|1391886_1392213_+	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_002482755.1|1392214_1392697_+	anti-sigma B factor RsbW	NA	NA	NA	NA	NA
WP_002482756.1|1392671_1393442_+	RNA polymerase sigma factor SigB	NA	A0A0A0RNH9	Bacillus_phage	33.9	3.7e-21
>prophage 110
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1406873	1411869	2578483		Micromonas_sp._RCC1109_virus(50.0%)	4	NA	NA
WP_011302712.1|1406873_1408409_-	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	27.2	8.3e-12
WP_037538061.1|1408559_1409564_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_002482765.1|1409608_1410082_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_011302715.1|1410078_1411869_-	biosynthetic-type acetolactate synthase large subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	29.7	2.7e-54
>prophage 111
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1415684	1421330	2578483	tRNA	Moraxella_phage(33.33%)	4	NA	NA
WP_002482771.1|1415684_1416713_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	39.1	3.4e-62
WP_069795161.1|1416861_1417284_+	glyoxalase/bleomycin resistance/extradiol dioxygenase family protein	NA	NA	NA	NA	NA
WP_041784785.1|1417435_1419037_-	AAA family ATPase	NA	F2QAF9	Pyramimonas_orientalis_virus	29.6	6.8e-17
WP_047503261.1|1419401_1421330_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A1V0SGN0	Hokovirus	28.8	3.2e-53
>prophage 112
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1424857	1428100	2578483		Bacillus_phage(50.0%)	3	NA	NA
WP_011302726.1|1424857_1426342_+	sucrose-6-phosphate hydrolase	NA	F8WPR5	Bacillus_phage	25.9	2.8e-17
WP_011302727.1|1426338_1427307_+	carbohydrate kinase	NA	NA	NA	NA	NA
WP_002482781.1|1427383_1428100_-	response regulator transcription factor	NA	A0A2H4J4Z6	uncultured_Caudovirales_phage	33.9	3.6e-26
>prophage 113
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1435411	1451907	2578483	terminase,integrase	Staphylococcus_phage(56.25%)	23	1437367:1437386	1453677:1453696
WP_002482789.1|1435411_1435699_+	co-chaperone GroES	NA	A0A221S386	uncultured_virus	48.4	1.8e-13
WP_047503246.1|1435761_1437384_+	chaperonin GroEL	NA	A0A240F779	uncultured_virus	53.4	5.4e-155
1437367:1437386	attL	ATGCCAGGTATGATGTAAAA	NA	NA	NA	NA
WP_048787037.1|1437451_1438621_-|integrase	site-specific integrase	integrase	A0A1W6JPB2	Staphylococcus_phage	78.4	2.4e-176
WP_048787038.1|1438641_1439388_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_048787039.1|1439555_1439774_+	helix-turn-helix transcriptional regulator	NA	A0A2H4JB11	uncultured_Caudovirales_phage	59.7	2.7e-17
WP_048787040.1|1439777_1440086_+	helix-turn-helix domain-containing protein	NA	A0A1W6JPE8	Staphylococcus_phage	75.5	1.1e-35
WP_048787041.1|1440082_1440271_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048787042.1|1440272_1440587_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048787043.1|1440687_1441575_+	primase C-terminal domain-containing protein	NA	A0A1W6JQL5	Staphylococcus_phage	50.3	3.2e-77
WP_104010426.1|1443817_1444060_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048787045.1|1444144_1444351_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048787046.1|1444364_1444982_+	hypothetical protein	NA	A0A1W6JPC6	Staphylococcus_phage	55.5	4.9e-56
WP_048787047.1|1444993_1445467_+	hypothetical protein	NA	A0A1W6JPF7	Staphylococcus_phage	43.9	3.5e-30
WP_048787048.1|1446635_1447109_+|terminase	phage terminase small subunit P27 family	terminase	A0A2H4JB21	uncultured_Caudovirales_phage	71.3	2.3e-53
WP_048787049.1|1447149_1447686_+	hypothetical protein	NA	A0A2H4JB26	uncultured_Caudovirales_phage	49.7	4.6e-42
WP_172439363.1|1447682_1448009_+	hypothetical protein	NA	A0A2H4JEA5	uncultured_Caudovirales_phage	45.8	1.9e-22
WP_048787050.1|1448005_1448341_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048787051.1|1448508_1449477_+	Abi family protein	NA	NA	NA	NA	NA
WP_048787475.1|1449578_1449770_+	hypothetical protein	NA	U3PCX8	Staphylococcus_phage	92.1	1.0e-28
WP_048787476.1|1449779_1450190_+	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	98.5	1.7e-73
WP_002455578.1|1450218_1450707_-	ATP-binding protein	NA	A0A2H4JFX6	uncultured_Caudovirales_phage	100.0	3.2e-87
WP_048787477.1|1450889_1451393_-	hypothetical protein	NA	A0A0H3U2S7	Staphylococcus_phage	67.7	1.1e-26
WP_037554460.1|1451385_1451907_-	hypothetical protein	NA	A0A0H3U494	Staphylococcus_phage	83.2	1.0e-83
1453677:1453696	attR	ATGCCAGGTATGATGTAAAA	NA	NA	NA	NA
>prophage 114
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1460386	1461259	2578483		Staphylococcus_phage(100.0%)	1	NA	NA
WP_011302742.1|1460386_1461259_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	37.3	1.1e-29
>prophage 115
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1466807	1467212	2578483		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_002482807.1|1466807_1467212_-	YolD-like family protein	NA	A0A2H4JEH6	uncultured_Caudovirales_phage	49.5	6.5e-25
>prophage 116
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1471418	1473190	2578483		Bacillus_virus(50.0%)	2	NA	NA
WP_011302752.1|1471418_1471970_-	cysteine hydrolase	NA	G3MA16	Bacillus_virus	40.7	3.2e-30
WP_011302753.1|1472107_1473190_+	pectate lyase	NA	U5PWM6	Bacillus_phage	33.7	4.9e-43
>prophage 117
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1477135	1488122	2578483		Bacillus_virus(40.0%)	10	NA	NA
WP_011302757.1|1477135_1478605_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	44.7	1.3e-102
WP_047503232.1|1478597_1479419_+	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	50.2	1.3e-64
WP_037538142.1|1479504_1480083_+	DUF2179 domain-containing protein	NA	NA	NA	NA	NA
WP_002482819.1|1480079_1480268_+	NETI motif-containing protein	NA	NA	NA	NA	NA
WP_041079959.1|1480482_1481778_+	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	33.3	1.9e-17
WP_002482821.1|1481864_1482167_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047503222.1|1482416_1483091_+	M15 family metallopeptidase	NA	NA	NA	NA	NA
WP_105577662.1|1483209_1483899_+	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA	NA
WP_011302763.1|1483898_1486115_+	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	40.3	1.2e-131
WP_011302764.1|1486118_1488122_+	NAD-dependent DNA ligase LigA	NA	A0A0A8J9A9	Ralstonia_phage	36.0	7.3e-109
>prophage 118
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1494736	1499769	2578483		Streptococcus_phage(66.67%)	5	NA	NA
WP_002482831.1|1494736_1495654_+	diacylglycerol kinase	NA	A0A1V0SBJ0	Catovirus	26.4	7.9e-18
WP_011302769.1|1495739_1497101_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A1X9I6F4	Streptococcus_phage	43.9	2.9e-109
WP_011302770.1|1497325_1497886_+	DUF3267 domain-containing protein	NA	NA	NA	NA	NA
WP_011302771.1|1498082_1499153_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_069795148.1|1499214_1499769_-	3'-5' exonuclease	NA	A0A1S5SEW3	Streptococcus_phage	39.4	2.8e-26
>prophage 119
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1503197	1504145	2578483	transposase	Bacillus_phage(100.0%)	1	NA	NA
WP_105577665.1|1503197_1504145_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	45.6	4.7e-58
>prophage 120
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1508373	1509003	2578483		Bacillus_phage(100.0%)	1	NA	NA
WP_105577666.1|1508373_1509003_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	25.9	8.9e-05
>prophage 121
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1523840	1525577	2578483		Bacillus_phage(100.0%)	1	NA	NA
WP_011302794.1|1523840_1525577_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.5	1.7e-50
>prophage 122
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1542786	1543509	2578483		Planktothrix_phage(100.0%)	1	NA	NA
WP_002482873.1|1542786_1543509_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.0	4.3e-35
>prophage 123
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1548797	1549625	2578483		Bodo_saltans_virus(100.0%)	1	NA	NA
WP_069795249.1|1548797_1549625_-	RluA family pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	26.2	6.9e-05
>prophage 124
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1567804	1568542	2578483		Staphylococcus_phage(100.0%)	1	NA	NA
WP_002482897.1|1567804_1568542_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.8	4.5e-24
>prophage 125
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1576737	1612498	2578483	tRNA	Staphylococcus_phage(96.15%)	35	NA	NA
WP_041784790.1|1576737_1578120_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	61.3	5.3e-167
WP_011302825.1|1578139_1579144_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	49.4	2.9e-90
WP_011302826.1|1579133_1579385_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	81.1	4.2e-30
WP_011302827.1|1579444_1579921_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	53.5	4.8e-43
WP_011302828.1|1579904_1580696_+	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	71.8	6.4e-101
WP_011302829.1|1580791_1582381_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	81.8	8.5e-262
WP_011302830.1|1582769_1583966_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	86.6	1.8e-195
WP_011302831.1|1584064_1584973_+	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	75.8	1.1e-101
WP_011302832.1|1585142_1585979_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	68.2	4.2e-111
WP_047504130.1|1586249_1586606_-	CrcB family protein	NA	NA	NA	NA	NA
WP_011302834.1|1586602_1586968_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	62.8	3.3e-36
WP_011302835.1|1587178_1587484_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011302836.1|1587768_1588482_+	transaldolase	NA	E3SKN5	Synechococcus_phage	36.3	2.9e-20
WP_172606398.1|1589016_1589499_+	pentapeptide repeat-containing protein	NA	NA	NA	NA	NA
WP_011302838.1|1589598_1590048_+	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	47.5	1.3e-21
WP_011302839.1|1590055_1590481_-	competence protein ComK	NA	NA	NA	NA	NA
WP_011302840.1|1590494_1590965_-	sigma-70 family RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	43.7	2.9e-24
WP_011302841.1|1591185_1591410_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002482919.1|1591577_1592429_+	glucosaminidase domain-containing protein	NA	A0A0E3T9J6	Staphylococcus_phage	43.3	1.7e-38
WP_047504127.1|1594310_1595237_-	osmoprotectant ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_011302847.1|1595411_1596878_+	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	58.6	5.5e-13
WP_011302848.1|1597419_1598463_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	64.4	1.0e-130
WP_011302849.1|1598469_1599102_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	64.8	5.0e-72
WP_011302850.1|1599113_1600295_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	71.2	4.2e-165
WP_002482978.1|1600308_1600767_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	76.3	6.6e-58
WP_047504116.1|1601031_1602033_-	proline dehydrogenase family protein	NA	A0A2H4PQT6	Staphylococcus_phage	68.5	7.3e-126
WP_011302852.1|1602298_1603123_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_069795296.1|1603358_1604315_+	L-lactate dehydrogenase	NA	NA	NA	NA	NA
WP_002482982.1|1604466_1604868_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011302854.1|1604986_1605547_-	class I SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	63.8	9.5e-67
WP_011302855.1|1605543_1606497_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	83.3	7.3e-67
WP_011302856.1|1606606_1607776_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	77.4	2.0e-167
WP_011302857.1|1608304_1610719_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	85.6	0.0e+00
WP_002482987.1|1610737_1611049_+	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	68.9	4.5e-34
WP_069795297.1|1611229_1612498_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	77.2	1.5e-38
>prophage 126
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1622845	1628093	2578483		Staphylococcus_phage(50.0%)	3	NA	NA
WP_002483000.1|1622845_1623709_+	DUF1444 domain-containing protein	NA	A0A2H4PQY3	Staphylococcus_phage	89.1	2.1e-65
WP_002483001.1|1623723_1624323_+	DUF4479 domain-containing protein	NA	NA	NA	NA	NA
WP_069795301.1|1624340_1628093_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	44.1	5.4e-81
>prophage 127
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1636477	1638187	2578483		Staphylococcus_phage(100.0%)	1	NA	NA
WP_011302875.1|1636477_1638187_+	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	85.3	2.2e-239
>prophage 128
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1642006	1644835	2578483	protease,tRNA	Serratia_phage(50.0%)	2	NA	NA
WP_011302879.1|1642006_1643269_+|tRNA	tyrosine--tRNA ligase	tRNA	A0A1S6UA79	Serratia_phage	41.2	1.3e-84
WP_069795307.1|1643560_1644835_-|protease	serine protease	protease	W5SAB9	Pithovirus	28.0	3.8e-10
>prophage 129
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1648705	1652904	2578483		Staphylococcus_phage(50.0%)	4	NA	NA
WP_047504075.1|1648705_1650322_-	phosphoglycerate dehydrogenase	NA	A0A2H4PQU8	Staphylococcus_phage	52.6	1.5e-59
WP_047504071.1|1650314_1651475_-	alanine--glyoxylate aminotransferase family protein	NA	NA	NA	NA	NA
WP_047504070.1|1651639_1652080_-	SACOL1771 family peroxiredoxin	NA	NA	NA	NA	NA
WP_069795308.1|1652157_1652904_+	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	28.0	3.5e-08
>prophage 130
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1657616	1662078	2578483	tRNA	Faustovirus(50.0%)	4	NA	NA
WP_105577668.1|1657616_1658753_+	cysteine desulfurase	NA	A0A1X7QGF3	Faustovirus	27.2	3.7e-25
WP_105577669.1|1658749_1659973_+|tRNA	tRNA 4-thiouridine(8) synthase ThiI	tRNA	NA	NA	NA	NA
WP_069795310.1|1660027_1660801_+	TSUP family transporter	NA	NA	NA	NA	NA
WP_011302894.1|1661085_1662078_+	signal peptide peptidase SppA	NA	K4I1N3	Providencia_phage	30.6	4.2e-17
>prophage 131
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1674530	1677734	2578483		Streptomyces_phage(100.0%)	1	NA	NA
WP_069795317.1|1674530_1677734_+	DNA polymerase III subunit alpha	NA	A0A2L1IZ23	Streptomyces_phage	30.8	1.8e-133
>prophage 132
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1682412	1684173	2578483		Staphylococcus_phage(100.0%)	1	NA	NA
WP_069824882.1|1682412_1684173_+	pyruvate kinase	NA	A0A2H4PQU5	Staphylococcus_phage	76.7	1.4e-31
>prophage 133
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1687421	1695221	2578483		Bacillus_phage(40.0%)	5	NA	NA
WP_011302914.1|1687421_1688687_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	55.6	9.2e-09
WP_011302915.1|1689109_1689820_+	response regulator transcription factor	NA	A0A1J0GWE0	Alteromonas_phage	26.5	4.8e-07
WP_011302916.1|1689819_1691508_+	HAMP domain-containing sensor histidine kinase	NA	W8CYF6	Bacillus_phage	36.3	4.6e-32
WP_069821492.1|1691702_1694333_+	DNA polymerase I	NA	A8E2B3	Enterococcus_phage	32.7	2.3e-46
WP_047504025.1|1694348_1695221_+	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	F8WPX6	Bacillus_phage	30.1	1.0e-30
>prophage 134
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1699264	1710594	2578483	protease,tRNA	Brevibacillus_phage(20.0%)	10	NA	NA
WP_069795321.1|1699264_1700188_+	primosomal protein DnaI	NA	S5MU12	Brevibacillus_phage	30.7	2.7e-34
WP_011302924.1|1700539_1702477_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	37.4	1.3e-118
WP_069795322.1|1702920_1704411_+	amino acid permease	NA	NA	NA	NA	NA
WP_002483063.1|1704623_1705151_+	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	31.7	5.9e-10
WP_002483064.1|1705179_1705380_+	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_002483065.1|1705431_1705788_+	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_002483066.1|1706114_1706726_+	NUDIX domain-containing protein	NA	A0A060AB76	Staphylococcus_phage	41.9	1.0e-21
WP_069795323.1|1706738_1707665_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002483068.1|1707834_1709145_+	trigger factor	NA	NA	NA	NA	NA
WP_069795324.1|1709331_1710594_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	62.2	3.1e-142
>prophage 135
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1720505	1723136	2578483	tRNA	Catovirus(100.0%)	1	NA	NA
WP_002483080.1|1720505_1723136_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	41.9	1.7e-158
>prophage 136
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1734238	1770925	2578483	tRNA	uncultured_Mediterranean_phage(17.65%)	32	NA	NA
WP_002483095.1|1734238_1735243_+	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.9	1.7e-05
WP_069795325.1|1735245_1736271_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_011302950.1|1736291_1737437_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	45.0	2.5e-85
WP_011302951.1|1737452_1737713_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	44.1	7.4e-06
WP_011302952.1|1738095_1740372_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	34.6	1.7e-29
WP_011302953.1|1740553_1742833_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.4	3.8e-69
WP_002483102.1|1742845_1743364_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.2	6.6e-30
WP_002483103.1|1743689_1745879_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A2I2L310	Orpheovirus	39.1	3.1e-12
WP_011302954.1|1745891_1746344_+|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_069795326.1|1746340_1747216_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A067ZJB6	Vibrio_phage	30.4	3.9e-14
WP_011302956.1|1747544_1748807_+|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_011302957.1|1748819_1750586_+|tRNA	aspartate--tRNA ligase	tRNA	K7Y9W2	Megavirus	40.2	1.9e-07
WP_011302959.1|1750982_1751753_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
WP_011302960.1|1751920_1753204_-	replication-associated recombination protein A	NA	A0A127AWE7	Bacillus_phage	50.5	1.7e-106
WP_002483110.1|1753290_1753710_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_002483111.1|1753835_1754018_+	CsbD family protein	NA	NA	NA	NA	NA
WP_011302961.1|1754055_1754226_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011302962.1|1754372_1755371_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_011302963.1|1755664_1755991_+	ATP-binding cassette domain-containing protein	NA	NA	NA	NA	NA
WP_011302964.1|1756159_1757296_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A1V0SKJ1	Klosneuvirus	24.9	1.5e-18
WP_002483116.1|1757356_1758499_+	cysteine desulfurase	NA	A0A1X7C038	Faustovirus	28.0	1.6e-28
WP_048787231.1|1758499_1759612_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_011302966.1|1759746_1760412_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_048787230.1|1760415_1762800_+	ATP-dependent RecD-like DNA helicase	NA	A0A1P8DII4	Virus_Rctr197k	27.1	4.5e-49
WP_069795328.1|1763147_1765778_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	34.0	3.8e-65
WP_002483121.1|1765847_1766108_+	IreB family regulatory phosphoprotein	NA	NA	NA	NA	NA
WP_011302969.1|1766111_1766540_+	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_002483123.1|1766556_1766889_+	DUF1292 domain-containing protein	NA	NA	NA	NA	NA
WP_002483124.1|1767458_1768100_+	O-methyltransferase	NA	NA	NA	NA	NA
WP_011302970.1|1768096_1769020_+	U32 family peptidase	NA	Q6DW11	Phage_TP	28.6	1.7e-20
WP_103301694.1|1769075_1770302_+	U32 family peptidase	NA	Q6DW11	Phage_TP	31.6	3.8e-36
WP_011302972.1|1770301_1770925_+	uridine kinase	NA	A0A1V0SAA3	Catovirus	41.1	1.8e-34
>prophage 137
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1784025	1796384	2578483		Bacillus_phage(20.0%)	10	NA	NA
WP_002483145.1|1784025_1784487_+	ComE operon protein 2	NA	F8WPT6	Bacillus_phage	55.1	1.4e-34
WP_011302988.1|1784618_1786700_+	DNA internalization-related competence protein ComEC/Rec2	NA	Q332B9	Clostridium_botulinum_C_phage	32.8	1.1e-27
WP_011302989.1|1786771_1787746_+	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
WP_002483148.1|1787862_1788114_-	30S ribosomal protein S20	NA	NA	NA	NA	NA
WP_011302990.1|1788438_1790262_+	elongation factor 4	NA	A0A1S5SF82	Streptococcus_phage	23.8	7.5e-20
WP_069795334.1|1790358_1791483_+	oxygen-independent coproporphyrinogen III oxidase	NA	NA	NA	NA	NA
WP_011302992.1|1791583_1792564_+	heat-inducible transcription repressor HrcA	NA	NA	NA	NA	NA
WP_002483152.1|1792590_1793202_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_002483153.1|1793257_1795102_+	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	46.6	7.6e-137
WP_011302993.1|1795247_1796384_+	molecular chaperone DnaJ	NA	A0A1V0SBY2	Catovirus	27.6	1.4e-24
>prophage 138
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1801552	1802500	2578483		Erwinia_phage(100.0%)	1	NA	NA
WP_002483161.1|1801552_1802500_+	PhoH family protein	NA	W8D063	Erwinia_phage	46.2	1.1e-46
>prophage 139
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1805678	1819586	2578483	tRNA	Catovirus(28.57%)	13	NA	NA
WP_002483167.1|1805678_1807070_-|tRNA	glycine--tRNA ligase	tRNA	A0A1V0SAN4	Catovirus	27.0	2.3e-45
WP_011303004.1|1807407_1808040_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_011303005.1|1808054_1808876_+	kinase/pyrophosphorylase	NA	NA	NA	NA	NA
WP_064205489.1|1808922_1810707_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	35.6	1.8e-50
WP_011303007.1|1810848_1811955_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	2.4e-37
WP_011303008.1|1812154_1812832_+|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_011303009.1|1812832_1813936_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
WP_011303010.1|1814277_1815618_+	DEAD/DEAH box helicase	NA	A0A1V0SBR7	Catovirus	34.0	1.1e-52
WP_011303011.1|1815627_1816518_+	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	32.1	6.9e-27
WP_011303012.1|1816674_1817448_+	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.5	1.2e-19
WP_011303013.1|1817444_1818305_+	metal ABC transporter permease	NA	NA	NA	NA	NA
WP_002483178.1|1818294_1818708_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_105577673.1|1818986_1819586_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	54.2	5.4e-60
>prophage 140
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1825755	1826379	2578483		Streptococcus_phage(100.0%)	1	NA	NA
WP_011303020.1|1825755_1826379_+	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	34.7	2.0e-28
>prophage 141
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1831922	1834740	2578483		Prochlorococcus_phage(100.0%)	2	NA	NA
WP_011303028.1|1831922_1833275_+	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	NA	E3SN07	Prochlorococcus_phage	38.1	5.0e-61
WP_011303029.1|1833261_1834740_+	aminomethyl-transferring glycine dehydrogenase subunit GcvPB	NA	E3ST28	Prochlorococcus_phage	41.5	1.8e-80
>prophage 142
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1841895	1844348	2578483		Indivirus(100.0%)	3	NA	NA
WP_011303037.1|1841895_1843233_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	38.9	7.1e-44
WP_011303038.1|1843225_1843471_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_011303039.1|1843460_1844348_+	polyprenyl synthetase family protein	NA	A0A1V0SE37	Indivirus	25.6	2.1e-07
>prophage 143
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1849090	1850512	2578483		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_011303043.1|1849090_1850512_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.4	1.1e-39
>prophage 144
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1857190	1858600	2578483		Synechococcus_phage(100.0%)	1	NA	NA
WP_011303049.1|1857190_1858600_+	NADP-dependent phosphogluconate dehydrogenase	NA	A0A222YX62	Synechococcus_phage	28.9	1.7e-27
>prophage 145
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1862886	1864371	2578483		Cyanophage(100.0%)	1	NA	NA
WP_037538404.1|1862886_1864371_-	glucose-6-phosphate dehydrogenase	NA	M4SIY3	Cyanophage	37.8	9.0e-80
>prophage 146
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1869640	1879608	2578483		uncultured_Mediterranean_phage(28.57%)	11	NA	NA
WP_002483230.1|1869640_1870528_+	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	31.4	5.1e-38
WP_011303058.1|1870596_1871103_-	DUF309 domain-containing protein	NA	NA	NA	NA	NA
WP_011303059.1|1871194_1871929_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	23.5	1.4e-09
WP_002483233.1|1871912_1872461_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	31.4	2.1e-10
WP_002483234.1|1872453_1873191_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_011303060.1|1873317_1874043_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	42.6	1.1e-46
WP_175268009.1|1874023_1875790_+	HAMP domain-containing protein	NA	A0A1V0SGX0	Hokovirus	23.8	3.0e-21
WP_037538408.1|1876217_1876763_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_002483238.1|1876918_1877167_-	ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	4.9e-15
WP_011303062.1|1877276_1878236_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_011303063.1|1878228_1879608_+	ATP-dependent DNA helicase RecQ	NA	M1PGQ0	Moumouvirus	32.4	7.1e-55
>prophage 147
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1888565	1892143	2578483		Bacillus_phage(50.0%)	5	NA	NA
WP_002483248.1|1888565_1888838_+	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	71.1	4.7e-27
WP_002483249.1|1889291_1889864_+	hypothetical protein	NA	NA	NA	NA	NA
WP_069795344.1|1889865_1890567_+	demethylmenaquinone methyltransferase	NA	NA	NA	NA	NA
WP_011303068.1|1890593_1891547_+	polyprenyl synthetase family protein	NA	NA	NA	NA	NA
WP_002483252.1|1891693_1892143_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	6.3e-29
>prophage 148
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1900955	1908011	2578483	tRNA	unidentified_phage(25.0%)	5	NA	NA
WP_011303077.1|1900955_1902155_+|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	43.5	9.6e-40
WP_011303078.1|1902147_1903119_+	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
WP_011303079.1|1903145_1905848_+	DEAD/DEAH box helicase family protein	NA	A0A1X9I5C8	Streptococcus_phage	28.0	3.9e-57
WP_011303080.1|1905939_1907232_+|tRNA	asparagine--tRNA ligase	tRNA	M1PB22	Moumouvirus	30.0	1.3e-55
WP_002483266.1|1907324_1908011_+	DnaD domain-containing protein	NA	Q938N2	Temperate_phage	34.9	4.2e-08
>prophage 149
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1911615	1912242	2578483		Paenibacillus_phage(100.0%)	1	NA	NA
WP_011303083.1|1911615_1912242_-	Holliday junction resolvase RecU	NA	R9TMF8	Paenibacillus_phage	34.1	1.3e-24
>prophage 150
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1922483	1938708	2578483		Staphylococcus_phage(37.5%)	21	NA	NA
WP_011303091.1|1922483_1923365_+	5'-3' exonuclease	NA	A0A1S6L2U4	Erwinia_phage	28.1	8.4e-17
WP_069795350.1|1923640_1924048_-	ribonuclease HI family protein	NA	NA	NA	NA	NA
WP_069795351.1|1924210_1924792_+	serine hydrolase family protein	NA	NA	NA	NA	NA
WP_069795352.1|1924808_1925513_-	queuosine precursor transporter	NA	A0A2H4J2N7	uncultured_Caudovirales_phage	24.6	7.1e-11
WP_011303093.1|1925764_1925959_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_047503807.1|1925976_1926234_+	NifU N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_011303095.1|1926249_1927368_+	virulence factor C	NA	NA	NA	NA	NA
WP_002483285.1|1927405_1927840_+	BrxA/BrxB family bacilliredoxin	NA	NA	NA	NA	NA
WP_011303096.1|1928131_1929088_+	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	83.6	9.3e-163
WP_011303097.1|1929182_1929668_+	dihydrofolate reductase	NA	A0A0N9S8H6	Staphylococcus_phage	76.6	5.7e-68
WP_011303098.1|1929678_1930518_+	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	71.4	5.3e-45
WP_002483289.1|1930648_1931176_+	peptide-methionine (S)-S-oxide reductase MsrA	NA	NA	NA	NA	NA
WP_002483290.1|1931168_1931597_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_011303099.1|1931611_1932112_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_069795353.1|1932111_1932333_+	YozE family protein	NA	NA	NA	NA	NA
WP_069795354.1|1932488_1933964_+	S41 family peptidase	NA	A0A0R6PIZ1	Moraxella_phage	29.9	1.1e-21
WP_011303101.1|1933985_1934495_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011303102.1|1934505_1935582_+	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	NA	NA	NA	NA	NA
WP_011303103.1|1935594_1936209_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_011303104.1|1936693_1937356_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.6	7.1e-37
WP_011303105.1|1937352_1938708_+	ATP-binding protein	NA	W8CYF6	Bacillus_phage	28.7	4.4e-25
>prophage 151
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1950775	1954799	2578483		Staphylococcus_phage(50.0%)	5	NA	NA
WP_048787360.1|1950775_1951591_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.6	5.4e-10
WP_011303119.1|1952405_1952606_-	hypothetical protein	NA	NA	NA	NA	NA
WP_069795356.1|1952823_1953636_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
WP_002483310.1|1953650_1953854_+	hypothetical protein	NA	NA	NA	NA	NA
WP_069795357.1|1954007_1954799_+	MoxR family ATPase	NA	R4TG24	Halovirus	25.7	2.8e-11
>prophage 152
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1958398	1964672	2578483	lysis	Vibrio_phage(25.0%)	7	NA	NA
WP_011303124.1|1958398_1960030_+	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	21.6	1.7e-10
WP_011303125.1|1960079_1961213_-	toxic anion resistance protein	NA	A0A291I9K4	Lactobacillus_phage	26.7	2.9e-30
WP_047503755.1|1961247_1961868_-|lysis	5-bromo-4-chloroindolyl phosphate hydrolysis family protein	lysis	NA	NA	NA	NA
WP_069795360.1|1961881_1962151_-	acylphosphatase	NA	NA	NA	NA	NA
WP_011303128.1|1962497_1962806_+	DUF1033 family protein	NA	NA	NA	NA	NA
WP_001831260.1|1962993_1963194_+	cold shock protein CspA	NA	Q9AZD3	Lactococcus_phage	64.6	2.5e-17
WP_047503752.1|1963406_1964672_-	diaminopimelate decarboxylase	NA	A0A0P0YM38	Yellowstone_lake_phycodnavirus	22.7	2.0e-11
>prophage 153
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1972231	1974883	2578483		Staphylococcus_phage(50.0%)	2	NA	NA
WP_011303137.1|1972231_1973062_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	38.3	4.6e-49
WP_002483328.1|1973278_1974883_-	ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	26.2	2.1e-50
>prophage 154
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1979388	1982788	2578483		Indivirus(50.0%)	3	NA	NA
WP_105577678.1|1979388_1980264_+	phosphate ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	29.1	5.9e-15
WP_011303142.1|1980271_1980922_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA	NA
WP_069795362.1|1980976_1982788_-	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	46.5	2.0e-150
>prophage 155
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	1992540	1994888	2578483		Acinetobacter_phage(100.0%)	3	NA	NA
WP_011303152.1|1992540_1993323_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	38.4	9.3e-28
WP_011303153.1|1993306_1994323_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	30.0	1.1e-31
WP_011303154.1|1994291_1994888_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	33.7	2.1e-24
>prophage 156
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2002936	2004199	2578483		Bacillus_phage(100.0%)	1	NA	NA
WP_047503710.1|2002936_2004199_-	Y-family DNA polymerase	NA	O64031	Bacillus_phage	42.0	2.0e-88
>prophage 157
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2008225	2009716	2578483		Staphylococcus_phage(100.0%)	1	NA	NA
WP_011303168.1|2008225_2009716_-	sugar ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.5	1.5e-18
>prophage 158
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2020793	2025187	2578483		Bacillus_virus(100.0%)	2	NA	NA
WP_011303177.1|2020793_2023196_-	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	32.7	5.5e-103
WP_103301490.1|2023192_2025187_-	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	41.4	7.7e-119
>prophage 159
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2030250	2031894	2578483		Vibrio_phage(100.0%)	1	NA	NA
WP_011303181.1|2030250_2031894_-	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	26.0	3.6e-21
>prophage 160
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2035621	2036752	2578483		Staphylococcus_phage(100.0%)	1	NA	NA
WP_011303184.1|2035621_2036752_-	exonuclease SbcCD subunit D	NA	A1YTR7	Staphylococcus_phage	24.7	6.1e-12
>prophage 161
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2041652	2047227	2578483		Phage_Wrath(25.0%)	6	NA	NA
WP_011303190.1|2041652_2042276_+	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	63.8	4.5e-17
WP_011303191.1|2042475_2043498_-	CAP domain-containing protein	NA	U5Q0C0	Bacillus_phage	40.7	2.4e-15
WP_011303192.1|2043501_2044488_-	GMP reductase	NA	Q4ZCY7	Staphylococcus_virus	90.5	4.7e-170
WP_011303193.1|2044677_2044947_-	30S ribosomal protein S14	NA	NA	NA	NA	NA
WP_011303194.1|2045162_2045312_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_047503682.1|2045739_2047227_-	catalase	NA	A0A2K9L0T1	Tupanvirus	43.6	4.3e-90
>prophage 162
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2057904	2062172	2578483		Bacillus_phage(50.0%)	6	NA	NA
WP_011303214.1|2057904_2058435_-	thermonuclease family protein	NA	A0A1P8CWK6	Bacillus_phage	48.1	4.0e-22
WP_011303215.1|2058606_2058798_+	hypothetical protein	NA	NA	NA	NA	NA
WP_037538489.1|2058879_2059482_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_069794732.1|2059481_2060573_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_011303217.1|2060569_2061304_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_069795367.1|2061305_2062172_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	28.7	8.5e-22
>prophage 163
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2067829	2068303	2578483		Canarypox_virus(100.0%)	1	NA	NA
WP_011303223.1|2067829_2068303_+	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	40.1	1.3e-24
>prophage 164
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2074330	2081749	2578483		Acanthocystis_turfacea_Chlorella_virus(33.33%)	5	NA	NA
WP_069794798.1|2074330_2075149_-	aquaporin family protein	NA	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	36.0	2.1e-30
WP_011303230.1|2075320_2076355_-	LD-carboxypeptidase	NA	NA	NA	NA	NA
WP_002483421.1|2076560_2077094_-	glycerol-3-phosphate responsive antiterminator	NA	NA	NA	NA	NA
WP_011303231.1|2077105_2079073_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	29.9	2.1e-60
WP_047503649.1|2079085_2081749_-	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	25.1	1.9e-40
>prophage 165
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2086900	2087527	2578483		Staphylococcus_phage(100.0%)	1	NA	NA
WP_047503640.1|2086900_2087527_-	poly-gamma-glutamate hydrolase family protein	NA	A0A0D3MVF0	Staphylococcus_phage	38.7	3.8e-40
>prophage 166
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2093813	2094863	2578483		Bacillus_phage(100.0%)	1	NA	NA
WP_002483436.1|2093813_2094863_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	65.0	2.7e-123
>prophage 167
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2099346	2105105	2578483		Bacillus_virus(33.33%)	4	NA	NA
WP_069794800.1|2099346_2100639_-	insulinase family protein	NA	G3MBJ8	Bacillus_virus	26.4	2.7e-16
WP_069794801.1|2100638_2101928_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	25.7	2.5e-38
WP_011303248.1|2101938_2102652_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011303249.1|2102654_2105105_-	cell division protein FtsK	NA	S5VNE3	Mycobacterium_phage	47.7	9.0e-85
>prophage 168
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2115555	2124573	2578483		Bodo_saltans_virus(50.0%)	6	NA	NA
WP_105577681.1|2115555_2117661_-	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	25.8	3.3e-19
WP_002483455.1|2117665_2117983_-	ribosomal L7Ae/L30e/S12e/Gadd45 family protein	NA	NA	NA	NA	NA
WP_002483456.1|2117979_2118264_-	YlxR family protein	NA	NA	NA	NA	NA
WP_002483457.1|2118281_2119475_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_002483458.1|2119498_2119966_-	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_069794804.1|2120256_2124573_-	PolC-type DNA polymerase III	NA	A0A0A8WJ41	Clostridium_phage	40.7	3.6e-20
>prophage 169
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2129109	2129874	2578483		Flavobacterium_phage(100.0%)	1	NA	NA
WP_011303261.1|2129109_2129874_-	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	44.4	3.5e-27
>prophage 170
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2134327	2145292	2578483	protease,tRNA	Erwinia_phage(20.0%)	9	NA	NA
WP_047503618.1|2134327_2135740_-|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A1B2IDZ7	Erwinia_phage	27.0	4.7e-30
WP_172439372.1|2135852_2136398_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_011303266.1|2136398_2137289_-	tyrosine recombinase XerC	NA	A0A0K2CP59	Brevibacillus_phage	30.5	1.1e-27
WP_069795370.1|2137407_2138715_-|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
WP_011303268.1|2138869_2140936_-	type I DNA topoisomerase	NA	A0A1V0SCS0	Indivirus	38.8	1.5e-104
WP_069795371.1|2141138_2142014_-	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_011303270.1|2142320_2143226_-	succinate--CoA ligase subunit alpha	NA	A0A2K9L1S3	Tupanvirus	33.2	3.9e-17
WP_011303271.1|2143247_2144414_-	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA	NA
WP_069794807.1|2144521_2145292_-	ribonuclease HII	NA	E3T5H8	Cafeteria_roenbergensis_virus	42.0	1.1e-25
>prophage 171
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2163459	2165633	2578483		Acanthamoeba_polyphaga_moumouvirus(33.33%)	3	NA	NA
WP_011303283.1|2163459_2164194_-	ribonuclease III	NA	L7RCJ8	Acanthamoeba_polyphaga_moumouvirus	32.2	3.4e-24
WP_002483492.1|2164421_2164655_-	acyl carrier protein	NA	E3SSM9	Prochlorococcus_phage	61.7	3.5e-07
WP_002483493.1|2164898_2165633_-	3-oxoacyl-[acyl-carrier-protein] reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	29.9	1.6e-16
>prophage 172
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2179135	2181190	2578483		Acanthamoeba_polyphaga_moumouvirus(100.0%)	1	NA	NA
WP_011303296.1|2179135_2181190_-	Stk1 family PASTA domain-containing Ser/Thr kinase	NA	L7RGQ5	Acanthamoeba_polyphaga_moumouvirus	32.1	4.8e-23
>prophage 173
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2184339	2185272	2578483	tRNA	Prochlorococcus_phage(100.0%)	1	NA	NA
WP_069794815.1|2184339_2185272_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	31.0	5.6e-11
>prophage 174
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2189796	2196732	2578483		Methanothermobacter_phage(33.33%)	8	NA	NA
WP_047503540.1|2189796_2191005_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	33.1	2.5e-43
WP_002483517.1|2191241_2191454_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_002483518.1|2191453_2192077_-	guanylate kinase	NA	NA	NA	NA	NA
WP_011303305.1|2192236_2193934_+	fibronectin-binding domain-containing protein	NA	A0A0P0YM59	Yellowstone_lake_phycodnavirus	33.3	1.7e-05
WP_048787291.1|2194036_2194444_-	VOC family protein	NA	NA	NA	NA	NA
WP_047503538.1|2194536_2195391_-	YitT family protein	NA	NA	NA	NA	NA
WP_011303308.1|2195912_2196098_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011303309.1|2196120_2196732_-	orotate phosphoribosyltransferase	NA	S4W4D9	Pandoravirus	36.4	3.4e-25
>prophage 175
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2200688	2205303	2578483		Halovirus(33.33%)	4	NA	NA
WP_011303312.1|2200688_2201789_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	34.8	7.4e-63
WP_069794819.1|2201788_2203063_-	dihydroorotase	NA	NA	NA	NA	NA
WP_011303314.1|2203059_2203962_-	aspartate carbamoyltransferase catalytic subunit	NA	A0A1J0F9B8	Only_Syngen_Nebraska_virus	31.4	1.0e-25
WP_002483529.1|2203995_2205303_-	uracil transporter	NA	Q9KX94	Enterobacteria_phage	35.0	8.5e-58
>prophage 176
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2209235	2211986	2578483	tRNA	Klosneuvirus(100.0%)	1	NA	NA
WP_064205442.1|2209235_2211986_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	27.8	6.7e-89
>prophage 177
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2235449	2245444	2578483	transposase,integrase	uncultured_Caudovirales_phage(33.33%)	11	2240469:2240490	2243873:2243894
WP_103314661.1|2235449_2237807_-	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	44.9	6.2e-160
WP_011303341.1|2237999_2238314_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_011303342.1|2238454_2239363_-|transposase	IS3 family transposase	transposase	A0A0C5AEA5	Paenibacillus_phage	43.5	8.0e-47
WP_011303343.1|2239323_2240007_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_115340783.1|2240090_2240168_-	hypothetical protein	NA	NA	NA	NA	NA
2240469:2240490	attL	GTGCCATGCCAGTGCCATAAAA	NA	NA	NA	NA
WP_048787298.1|2241242_2241653_-	YolD-like family protein	NA	A0A2H4JEH6	uncultured_Caudovirales_phage	90.4	2.2e-68
WP_011303347.1|2241662_2241854_-	hypothetical protein	NA	A0A2H4JGI3	uncultured_Caudovirales_phage	95.2	7.0e-30
WP_047503483.1|2241949_2242198_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_069795385.1|2242815_2243859_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1W6JQE7	Staphylococcus_phage	62.8	2.4e-119
WP_069795386.1|2244353_2244863_-	metallophosphoesterase	NA	NA	NA	NA	NA
2243873:2243894	attR	GTGCCATGCCAGTGCCATAAAA	NA	NA	NA	NA
WP_011303379.1|2244859_2245444_-	XTP/dITP diphosphatase	NA	A0A0P0A2M4	Ugandan_cassava_brown_streak_virus	30.5	5.2e-15
>prophage 178
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2252029	2256496	2578483		Staphylococcus_phage(33.33%)	3	NA	NA
WP_011303383.1|2252029_2252344_-	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	47.6	6.6e-25
WP_011303384.1|2252425_2254774_-	endonuclease MutS2	NA	F2QAF8	Phaeocystis_pouchetii_virus	24.9	3.0e-13
WP_047503105.1|2254783_2256496_-	DNA polymerase/3'-5' exonuclease PolX	NA	A0A2H4UV14	Bodo_saltans_virus	26.8	1.3e-18
>prophage 179
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2261343	2262402	2578483	tRNA	Orpheovirus(100.0%)	1	NA	NA
WP_002483641.1|2261343_2262402_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2I2L4E3	Orpheovirus	37.9	1.9e-31
>prophage 180
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2267081	2269987	2578483		uncultured_Mediterranean_phage(50.0%)	5	NA	NA
WP_011303393.1|2267081_2267567_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	42.4	7.1e-26
WP_069795389.1|2267568_2268111_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
WP_011303395.1|2268180_2268570_+	hypothetical protein	NA	NA	NA	NA	NA
WP_069795390.1|2268680_2268932_-	DUF2129 domain-containing protein	NA	NA	NA	NA	NA
WP_011303397.1|2269063_2269987_+	glycerophosphodiester phosphodiesterase	NA	M1HTS7	Paramecium_bursaria_Chlorella_virus	25.5	1.9e-11
>prophage 181
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2283921	2285769	2578483		Erysipelothrix_phage(100.0%)	1	NA	NA
WP_002483661.1|2283921_2285769_-	translational GTPase TypA	NA	A0A2K5B2A5	Erysipelothrix_phage	23.5	3.1e-21
>prophage 182
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2294076	2302894	2578483		Mycoplasma_phage(25.0%)	9	NA	NA
WP_011303413.1|2294076_2295171_-	ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	43.5	8.2e-38
WP_011303414.1|2295183_2295723_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002483673.1|2295864_2296143_-	UPF0223 family protein	NA	NA	NA	NA	NA
WP_002483674.1|2296375_2297782_-	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	29.7	3.3e-47
WP_069795392.1|2297785_2299087_-	2-oxo acid dehydrogenase subunit E2	NA	NA	NA	NA	NA
WP_002483676.1|2299231_2300209_-	alpha-ketoacid dehydrogenase subunit beta	NA	A0A0K0KW14	Prochlorococcus_phage	24.8	3.9e-07
WP_002483677.1|2300212_2301325_-	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	NA	NA	NA	NA	NA
WP_011303416.1|2301591_2302218_-	YkyA family protein	NA	NA	NA	NA	NA
WP_011303417.1|2302342_2302894_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.7	4.9e-15
>prophage 183
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2313295	2314465	2578483		Streptococcus_phage(100.0%)	1	NA	NA
WP_047502458.1|2313295_2314465_-	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	42.6	1.6e-76
>prophage 184
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2317571	2332175	2578483		Prochlorococcus_phage(22.22%)	14	NA	NA
WP_192573679.1|2317571_2318984_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	31.6	2.5e-15
WP_011303430.1|2318976_2319783_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_011303431.1|2319875_2321120_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_011303432.1|2321144_2322623_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	51.2	3.2e-77
WP_011303433.1|2322638_2323205_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	38.2	9.7e-27
WP_011303434.1|2323207_2324236_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	44.5	4.6e-67
WP_011303435.1|2324228_2325716_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	1.6e-44
WP_011303436.1|2325694_2327884_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.6	1.4e-137
WP_011303437.1|2327876_2328548_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_011303438.1|2328547_2328808_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_011303439.1|2328810_2329512_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A1D7SE76	Cyanophage	42.5	6.8e-46
WP_011303440.1|2329516_2330644_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_011303441.1|2330630_2331113_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.0	2.6e-20
WP_011303442.1|2331317_2332175_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA	A0A249XZQ2	Enterococcus_phage	38.6	3.5e-36
>prophage 185
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2340935	2342594	2578483		Streptococcus_phage(100.0%)	1	NA	NA
WP_011303449.1|2340935_2342594_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	36.3	9.3e-94
>prophage 186
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2345685	2350077	2578483		Staphylococcus_virus(100.0%)	1	NA	NA
WP_011303453.1|2345685_2350077_+	SH3-like domain-containing protein	NA	Q4ZE13	Staphylococcus_virus	46.2	4.3e-53
>prophage 187
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2369093	2373980	2578483	protease	Pithovirus(33.33%)	3	NA	NA
WP_069795394.1|2369093_2370887_-|protease	serine protease	protease	W5SAB9	Pithovirus	26.6	3.8e-08
WP_047502499.1|2371257_2372058_-	TerC family protein	NA	S5MAL1	Bacillus_phage	38.9	3.9e-29
WP_002483741.1|2372417_2373980_-	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	30.8	4.8e-15
>prophage 188
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2393738	2395547	2578483		Streptococcus_phage(100.0%)	1	NA	NA
WP_002483762.1|2393738_2395547_-	oligoendopeptidase F	NA	A0A1X9I5X5	Streptococcus_phage	24.2	1.1e-47
>prophage 189
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2401315	2403332	2578483		Organic_Lake_phycodnavirus(50.0%)	2	NA	NA
WP_011303489.1|2401315_2402260_-	ABC transporter ATP-binding protein	NA	F2Y1V6	Organic_Lake_phycodnavirus	25.1	5.4e-06
WP_011303490.1|2402249_2403332_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.4	1.1e-21
>prophage 190
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2410476	2415306	2578483		Cronobacter_phage(50.0%)	2	NA	NA
WP_047502522.1|2410476_2413086_-	ATP-dependent chaperone ClpB	NA	K4FB40	Cronobacter_phage	37.3	2.9e-118
WP_011303497.1|2413473_2415306_-	acetyltransferase	NA	A0A166XZF2	Gordonia_phage	30.0	3.1e-29
>prophage 191
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2420986	2424646	2578483		Bacillus_virus(100.0%)	1	NA	NA
WP_081323973.1|2420986_2424646_-	helicase-exonuclease AddAB subunit AddA	NA	G3MA40	Bacillus_virus	24.8	7.2e-22
>prophage 192
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2434917	2441577	2578483		Staphylococcus_phage(33.33%)	6	NA	NA
WP_011303511.1|2434917_2435907_+	glycerophosphodiester phosphodiesterase	NA	I6XE30	Staphylococcus_phage	34.7	1.1e-30
WP_011303512.1|2436010_2437255_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA	NA
WP_002483795.1|2437365_2438556_-	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.8	5.0e-33
WP_011303513.1|2438928_2440062_-	NADH-dependent flavin oxidoreductase	NA	NA	NA	NA	NA
WP_002483797.1|2440295_2440676_-	S1 RNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_002483798.1|2440983_2441577_-	peptidylprolyl isomerase	NA	A0A076FI46	Aureococcus_anophage	40.0	1.6e-24
>prophage 193
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2451775	2455301	2578483		Mycoplasma_phage(50.0%)	3	NA	NA
WP_011303522.1|2451775_2453257_-	leucyl aminopeptidase family protein	NA	Q6GYZ8	Mycoplasma_phage	36.6	5.3e-48
WP_011303523.1|2453498_2454707_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_011303524.1|2454941_2455301_-	iron-sulfur cluster assembly accessory protein	NA	A0A2H4N7M3	Lake_Baikal_phage	41.6	4.9e-16
>prophage 194
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2459490	2462165	2578483		Pseudomonas_phage(50.0%)	2	NA	NA
WP_011303527.1|2459490_2460705_-	D-alanyl-lipoteichoic acid biosynthesis protein DltB	NA	A0A125RNP0	Pseudomonas_phage	28.7	2.1e-18
WP_011303528.1|2460701_2462165_-	D-alanine--poly(phosphoribitol) ligase subunit DltA	NA	A0A2K9L3I8	Tupanvirus	28.3	2.1e-36
>prophage 195
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2469172	2470021	2578483		Kurlavirus(100.0%)	1	NA	NA
WP_011303535.1|2469172_2470021_-	DUF72 domain-containing protein	NA	A0A1S5XY79	Kurlavirus	29.0	2.5e-18
>prophage 196
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2475153	2478721	2578483		environmental_halophage(50.0%)	3	NA	NA
WP_002483836.1|2475153_2476401_-	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	43.6	9.8e-104
WP_002483837.1|2476550_2477858_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
WP_002483838.1|2477959_2478721_-	Fe-S cluster assembly ATPase SufC	NA	A0A285PWH2	Cedratvirus	26.4	3.2e-09
>prophage 197
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2483536	2487140	2578483		Planktothrix_phage(50.0%)	6	NA	NA
WP_011303544.1|2483536_2484562_-	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.2	7.7e-30
WP_011303545.1|2484813_2485113_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_011303546.1|2485109_2485502_-	topiosmerase	NA	NA	NA	NA	NA
WP_011303547.1|2485767_2486148_-	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_011303548.1|2486320_2486677_-	arsenate reductase family protein	NA	NA	NA	NA	NA
WP_011303549.1|2486819_2487140_+	thioredoxin family protein	NA	A0A1X9I9P5	Staphylococcus_phage	35.4	4.0e-09
>prophage 198
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2505797	2507453	2578483		Bacillus_phage(50.0%)	3	NA	NA
WP_047502600.1|2505797_2506217_-	FosB/FosD family fosfomycin resistance bacillithiol transferase	NA	Q2LI91	Bacillus_phage	61.2	5.5e-35
WP_080983410.1|2506252_2506720_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002455580.1|2507261_2507453_-	hypothetical protein	NA	U3PCX8	Staphylococcus_phage	100.0	2.9e-31
>prophage 199
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2511633	2517983	2578483		Staphylococcus_phage(33.33%)	6	NA	NA
WP_011303579.1|2511633_2512098_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	92.9	1.2e-75
WP_011303580.1|2512120_2514511_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	38.4	2.4e-90
WP_069795408.1|2514549_2515290_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_011303582.1|2515423_2515657_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_011303583.1|2515725_2516187_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011303585.1|2516678_2517983_-	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	78.4	1.1e-190
>prophage 200
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2527368	2534553	2578483		Streptococcus_phage(40.0%)	6	NA	NA
WP_069795411.1|2527368_2527953_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	55.8	4.8e-53
WP_047502685.1|2529272_2530118_-	YitT family protein	NA	NA	NA	NA	NA
WP_011303620.1|2530356_2531301_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	40.6	2.4e-54
WP_011303621.1|2531339_2532350_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	40.8	6.2e-48
WP_061050661.1|2532336_2533263_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	37.0	1.4e-09
WP_061050662.1|2533608_2534553_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	49.5	7.2e-83
>prophage 201
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2538644	2541482	2578483		uncultured_Mediterranean_phage(100.0%)	1	NA	NA
WP_061050665.1|2538644_2541482_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	56.9	1.0e-310
>prophage 202
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2545073	2546027	2578483		Staphylococcus_phage(100.0%)	1	NA	NA
WP_011303629.1|2545073_2546027_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A220BXB4	Staphylococcus_phage	41.3	1.2e-08
>prophage 203
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2551872	2554905	2578483		Streptococcus_phage(100.0%)	3	NA	NA
WP_061050667.1|2551872_2553210_-	DNA/RNA helicase	NA	A0A1X9I5S6	Streptococcus_phage	33.3	6.2e-48
WP_061050668.1|2553231_2554095_-	DegV family protein	NA	NA	NA	NA	NA
WP_061050669.1|2554263_2554905_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	43.7	2.0e-36
>prophage 204
NZ_CP022056	Staphylococcus saprophyticus strain FDAARGOS_336 chromosome, complete genome	2578483	2567382	2577894	2578483		uncultured_Caudovirales_phage(57.14%)	9	NA	NA
WP_011303645.1|2567382_2568183_-	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	27.4	1.2e-14
WP_069795415.1|2568179_2569139_-	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA	NA
WP_011303647.1|2569128_2570097_-	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.3	2.6e-136
WP_002483928.1|2570510_2571479_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	94.4	2.2e-175
WP_047502731.1|2571602_2573708_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	90.0	0.0e+00
WP_002483930.1|2573670_2574069_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	76.5	8.6e-54
WP_011303649.1|2574795_2575683_+	DMT family transporter	NA	NA	NA	NA	NA
WP_002483932.1|2575696_2576197_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	72.3	2.0e-52
WP_011303650.1|2576379_2577894_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	35.8	9.5e-69
>prophage 1
NZ_CP022055	Staphylococcus saprophyticus strain FDAARGOS_336 plasmid unnamed1, complete sequence	31132	5227	12471	31132	transposase	Staphylococcus_phage(33.33%)	9	NA	NA
WP_105577608.1|5227_5902_-|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	96.9	2.7e-124
WP_069805215.1|6353_6932_+	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	51.7	6.4e-42
WP_069805217.1|7057_7678_+	recombinase family protein	NA	E5FFF9	Burkholderia_phage	32.2	7.2e-15
WP_011148967.1|7732_7990_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002458491.1|8003_8546_-	recombinase family protein	NA	NA	NA	NA	NA
WP_012816714.1|8658_10110_+	SulP family inorganic anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	51.8	4.6e-121
WP_002458489.1|10123_10537_+	universal stress protein	NA	NA	NA	NA	NA
WP_046466213.1|11163_11709_+	recombinase family protein	NA	E5FFF9	Burkholderia_phage	42.0	4.1e-30
WP_069826576.1|11793_12471_-|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	98.2	4.2e-125
