The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP022037	[Haemophilus] ducreyi strain FDAARGOS_297 chromosome, complete genome	1701311	256642	271900	1701311		Enterobacteria_phage(14.29%)	11	NA	NA
WP_010944553.1|256642_259213_+	ATP-dependent chaperone ClpB	NA	H6X3M6	Enterobacteria_phage	34.1	4.2e-125
WP_010944552.1|259290_260718_-	aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_010944551.1|260846_261134_-	DUF1294 domain-containing protein	NA	NA	NA	NA	NA
WP_010944550.1|261235_262147_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	48.1	1.1e-64
WP_010944547.1|262511_263186_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	47.7	3.2e-53
WP_010944546.1|263178_263601_+	6-carboxytetrahydropterin synthase QueD	NA	A0A1U9WRB3	Streptococcus_virus	37.7	4.3e-19
WP_010944545.1|263600_264230_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A218M2Y8	Acidovorax_phage	33.6	2.2e-11
WP_010944544.1|264299_265799_-	leucyl aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	37.7	8.0e-52
WP_010944542.1|266125_267229_+	LPS export ABC transporter permease LptF	NA	NA	NA	NA	NA
WP_010944541.1|267229_268312_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA	NA
WP_010944540.1|268423_271900_+	DNA polymerase III subunit alpha	NA	A0A2L1IZ23	Streptomyces_phage	37.1	3.5e-191
>prophage 2
NZ_CP022037	[Haemophilus] ducreyi strain FDAARGOS_297 chromosome, complete genome	1701311	286504	309044	1701311	protease,capsid,head	Mannheimia_phage(36.0%)	33	NA	NA
WP_010944524.1|286504_287503_-	hypothetical protein	NA	A0A125RND5	Pseudomonas_phage	30.9	2.9e-34
WP_010944523.1|287502_290862_-	tape measure protein	NA	A0A2D1GNK1	Pseudomonas_phage	30.4	1.0e-107
WP_010944522.1|290876_291131_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944521.1|291307_291727_-	hypothetical protein	NA	A0A2D1GNY5	Pseudomonas_phage	39.7	1.2e-21
WP_010944520.1|291784_292528_-	hypothetical protein	NA	A0A2D1GNQ7	Pseudomonas_phage	49.4	1.0e-60
WP_010944519.1|292557_293004_-	hypothetical protein	NA	A0A075CI80	Pseudomonas_phage	32.2	2.6e-14
WP_010944518.1|293000_293387_-	DUF1320 domain-containing protein	NA	A0A2D1GNP0	Pseudomonas_phage	44.5	7.9e-20
WP_010944517.1|293389_293677_-	hypothetical protein	NA	A0A0M3LPR6	Mannheimia_phage	70.0	1.9e-18
WP_010944516.1|293723_294647_-|head	Mu-like prophage major head subunit gpT family protein	head	B7SDP1	Haemophilus_phage	82.8	4.6e-143
WP_041603382.1|294646_295717_-|protease	phage protease	protease	B7SDN9	Haemophilus_phage	78.3	5.9e-150
WP_010944514.1|295971_296388_-	phage virion morphogenesis protein	NA	A0A0M3LSP9	Mannheimia_phage	76.6	5.3e-54
WP_010944513.1|296520_297831_-|capsid	minor capsid protein	capsid	B7SDN5	Haemophilus_phage	67.1	2.1e-165
WP_010944512.1|297814_299452_-	DUF935 domain-containing protein	NA	B7SDN1	Haemophilus_phage	79.5	2.0e-253
WP_010944510.1|301190_301691_-	DUF1804 family protein	NA	A0A0M3LQI8	Mannheimia_phage	90.4	8.5e-75
WP_010944509.1|301698_301953_-	hypothetical protein	NA	A0A0M3LP87	Mannheimia_phage	54.8	2.4e-17
WP_010944508.1|301949_302228_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010944507.1|302276_302666_-	DUF2681 domain-containing protein	NA	A0A0M3LP93	Mannheimia_phage	43.5	9.1e-16
WP_010944506.1|302665_302899_-	DUF2644 domain-containing protein	NA	F6MIK0	Haemophilus_phage	88.0	4.7e-28
WP_010944505.1|302885_303239_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041603380.1|303243_303792_-	N-acetylmuramoyl-L-alanine amidase	NA	F6MIJ9	Haemophilus_phage	72.6	2.9e-76
WP_010944503.1|303879_304302_-	hypothetical protein	NA	F6MIJ8	Haemophilus_phage	67.6	1.9e-51
WP_010944502.1|304430_304640_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010944501.1|304650_305250_-	phage antirepressor Ant	NA	G9L6G1	Escherichia_phage	47.0	7.4e-25
WP_010944500.1|305563_305992_-	regulatory protein GemA	NA	F6MIJ6	Haemophilus_phage	65.0	1.5e-43
WP_041603379.1|305975_306542_-	hypothetical protein	NA	A0A0M3LPP6	Mannheimia_phage	73.4	4.5e-72
WP_050711635.1|306599_306869_-	DUF551 domain-containing protein	NA	NA	NA	NA	NA
WP_010944497.1|306878_307082_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010944496.1|307078_307375_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010944495.1|307393_307573_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041603377.1|307576_307795_-	ANR family transcriptional regulator	NA	A0A0M3LSH0	Mannheimia_phage	58.1	1.4e-05
WP_010944493.1|307878_308496_-	DUF3164 family protein	NA	A0A0M3LQ92	Mannheimia_phage	79.9	2.7e-91
WP_010944492.1|308506_308851_-	hypothetical protein	NA	A0A0M3LQH1	Mannheimia_phage	54.9	7.0e-20
WP_010944491.1|308837_309044_-	hypothetical protein	NA	F6MII8	Haemophilus_phage	47.4	8.5e-05
>prophage 3
NZ_CP022037	[Haemophilus] ducreyi strain FDAARGOS_297 chromosome, complete genome	1701311	596331	615392	1701311	head	Vibrio_phage(21.05%)	31	NA	NA
WP_010944187.1|596331_596760_-	hypothetical protein	NA	L7P7Y2	Pseudomonas_phage	40.5	3.7e-18
WP_010944186.1|596805_597546_-	hypothetical protein	NA	A0A2D1GNQ7	Pseudomonas_phage	50.6	1.6e-61
WP_010944185.1|597535_598189_-	DUF1834 family protein	NA	C9DGP5	Escherichia_phage	39.8	1.5e-15
WP_010944184.1|598188_598608_-	DUF1320 family protein	NA	A0A0C4UR02	Shigella_phage	36.0	8.8e-17
WP_010944183.1|598607_598988_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010944182.1|599062_599974_-|head	Mu-like prophage major head subunit gpT family protein	head	C9DGP2	Escherichia_phage	52.6	2.0e-82
WP_010944180.1|601216_601660_-	phage virion morphogenesis protein	NA	G9BWH2	Planktothrix_phage	29.8	3.8e-10
WP_010944179.1|603121_604726_-	DUF935 domain-containing protein	NA	A0A0C4UQR8	Shigella_phage	49.7	1.1e-136
WP_010944178.1|604729_606289_-	hypothetical protein	NA	A0A2I7S9C5	Vibrio_phage	61.5	1.6e-159
WP_010944177.1|606288_606858_-	DUF3486 family protein	NA	M4MCR3	Vibrio_phage	46.4	5.9e-40
WP_041603330.1|606880_607180_-	hypothetical protein	NA	A0A0C4UR00	Shigella_phage	54.1	1.2e-20
WP_010944175.1|607183_607519_-	DUF2730 domain-containing protein	NA	NA	NA	NA	NA
WP_010944174.1|607515_607746_-	TraR/DksA C4-type zinc finger protein	NA	NA	NA	NA	NA
WP_010944172.1|607865_608150_-	DUF2681 domain-containing protein	NA	NA	NA	NA	NA
WP_010944171.1|608152_608383_-	DUF2644 domain-containing protein	NA	F6MIK0	Haemophilus_phage	74.6	9.4e-21
WP_064083075.1|608615_609167_-	N-acetylmuramoyl-L-alanine amidase	NA	F6MIJ9	Haemophilus_phage	69.3	3.0e-73
WP_041603328.1|609243_609579_-	transcriptional regulator	NA	A0A2I7S9J0	Vibrio_phage	39.1	8.6e-07
WP_064083074.1|609575_610040_-	regulatory protein GemA	NA	Q6QIE7	Burkholderia_phage	30.9	7.3e-12
WP_010944165.1|610017_610386_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010944164.1|610367_610838_-	hypothetical protein	NA	A0A2H4JFV8	uncultured_Caudovirales_phage	43.2	1.1e-26
WP_010944163.1|610915_611191_-	hypothetical protein	NA	A0A2P0P8L3	Salmonella_phage	49.3	1.6e-11
WP_010944162.1|611190_611928_-	DUF2786 domain-containing protein	NA	A0A2P9JZH4	Alteromonadaceae_phage	35.4	6.7e-28
WP_010944161.1|611929_612223_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010944160.1|612231_612567_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010944159.1|612563_612767_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010944158.1|612769_612988_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041603327.1|612990_613155_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041603325.1|613382_613601_-	ANR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010944154.1|613611_614229_-	DUF3164 family protein	NA	A4JWM8	Burkholderia_virus	57.4	3.6e-67
WP_010944153.1|614241_614475_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010944152.1|614474_615392_-	AAA family ATPase	NA	A0A2I7S9C3	Vibrio_phage	44.6	3.2e-59
>prophage 4
NZ_CP022037	[Haemophilus] ducreyi strain FDAARGOS_297 chromosome, complete genome	1701311	862096	872678	1701311		uncultured_Caudovirales_phage(28.57%)	10	NA	NA
WP_041603563.1|862096_863005_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	30.5	5.2e-22
WP_010945598.1|863016_865080_-	DNA polymerase III subunit gamma/tau	NA	A0A1L2BWV7	Bacteriophage	35.8	2.9e-44
WP_010945597.1|865107_865647_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	45.0	6.0e-26
WP_010945596.1|865852_866611_-	ATP-binding cassette domain-containing protein	NA	A0A1M7XV31	Cedratvirus	26.6	3.0e-15
WP_010945595.1|866607_867513_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_010945594.1|867583_867919_-	TusE/DsrC/DsvC family sulfur relay protein	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	56.8	1.0e-28
WP_010945593.1|867980_868646_-	BAX inhibitor protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	54.8	1.8e-48
WP_041603561.1|868831_869383_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_010945591.1|869469_871308_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_010945590.1|871385_872678_+	purine permease	NA	Q9KX94	Enterobacteria_phage	28.4	1.5e-22
>prophage 5
NZ_CP022037	[Haemophilus] ducreyi strain FDAARGOS_297 chromosome, complete genome	1701311	1098180	1116166	1701311	holin	Pseudomonas_phage(75.0%)	22	NA	NA
WP_010944524.1|1098180_1099179_-	hypothetical protein	NA	A0A125RND5	Pseudomonas_phage	30.9	2.9e-34
WP_010944523.1|1099178_1102538_-	tape measure protein	NA	A0A2D1GNK1	Pseudomonas_phage	30.4	1.0e-107
WP_010944522.1|1102552_1102807_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010944521.1|1102983_1103403_-	hypothetical protein	NA	A0A2D1GNY5	Pseudomonas_phage	39.7	1.2e-21
WP_010944520.1|1103460_1104204_-	hypothetical protein	NA	A0A2D1GNQ7	Pseudomonas_phage	49.4	1.0e-60
WP_005597522.1|1104203_1104461_-	hypothetical protein	NA	NA	NA	NA	NA
WP_018652950.1|1104457_1104910_-	hypothetical protein	NA	A0A0S4L2X9	Pseudomonas_phage	32.7	2.1e-16
WP_010945390.1|1104902_1105412_-	DUF1320 domain-containing protein	NA	Q5ZQX5	Pseudomonas_phage	42.9	4.5e-31
WP_010945389.1|1105420_1106347_-	hypothetical protein	NA	A0A0S4L2T7	Pseudomonas_phage	63.6	1.1e-107
WP_010945388.1|1106397_1106766_-	DUF2190 family protein	NA	Q5ZQX8	Pseudomonas_phage	42.9	6.6e-16
WP_010945387.1|1106762_1107779_-	hypothetical protein	NA	Q5ZQY0	Pseudomonas_phage	61.2	3.0e-42
WP_010945386.1|1108001_1108493_-	phage virion morphogenesis protein	NA	Q5ZQY1	Pseudomonas_phage	38.4	6.3e-30
WP_010945385.1|1108599_1109850_-	hypothetical protein	NA	J9STS2	Pseudomonas_phage	46.1	8.9e-105
WP_010945384.1|1109842_1111354_-	DUF935 family protein	NA	Q5ZQY4	Pseudomonas_phage	52.4	1.9e-141
WP_010945383.1|1111356_1112976_-	hypothetical protein	NA	Q6QIC1	Burkholderia_phage	64.6	4.0e-182
WP_010945382.1|1112975_1113515_-	DUF3486 family protein	NA	A4JWJ3	Burkholderia_virus	52.2	8.9e-46
WP_010945381.1|1113524_1113830_-	hypothetical protein	NA	Q5ZQY7	Pseudomonas_phage	52.0	5.1e-22
WP_010945380.1|1113831_1114182_-	hypothetical protein	NA	Q6QIC4	Burkholderia_phage	28.2	5.9e-06
WP_041603711.1|1114284_1114515_-	hypothetical protein	NA	H6V8N0	Pseudomonas_phage	45.5	9.4e-05
WP_010945378.1|1114709_1115318_-	transglycosylase SLT domain-containing protein	NA	J9SH25	Pseudomonas_phage	60.4	5.5e-60
WP_010945377.1|1115320_1115695_-|holin	putative holin	holin	Q6QIC8	Burkholderia_phage	52.2	8.1e-22
WP_041603709.1|1115911_1116166_+	hypothetical protein	NA	B7SDP6	Haemophilus_phage	51.9	9.7e-19
>prophage 6
NZ_CP022037	[Haemophilus] ducreyi strain FDAARGOS_297 chromosome, complete genome	1701311	1120231	1127358	1701311		Pseudomonas_phage(42.86%)	11	NA	NA
WP_010945365.1|1120231_1120534_+	helix-turn-helix domain-containing protein	NA	A0A0S4L7B4	Pseudomonas_phage	41.8	9.5e-13
WP_010945364.1|1120563_1121526_+	hypothetical protein	NA	J9SND0	Pseudomonas_phage	26.7	2.6e-24
WP_041603531.1|1123359_1124532_+	AAA family ATPase	NA	A4JWN1	Burkholderia_virus	55.8	1.6e-111
WP_010945360.1|1124524_1124755_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010945359.1|1124729_1125254_+	host-nuclease inhibitor Gam family protein	NA	F6MIJ0	Haemophilus_phage	48.8	2.7e-39
WP_010945358.1|1125250_1125463_+	ANR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010945357.1|1125459_1125621_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010945355.1|1125666_1126143_+	hypothetical protein	NA	A0A2H4JFV8	uncultured_Caudovirales_phage	44.4	2.2e-27
WP_010945354.1|1126124_1126499_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010945353.1|1126488_1126890_+	regulatory protein GemA	NA	F8TVB3	EBPR_siphovirus	31.6	6.5e-09
WP_010945352.1|1127007_1127358_+	DNA-binding protein	NA	J9SGX4	Pseudomonas_phage	35.2	1.7e-13
>prophage 7
NZ_CP022037	[Haemophilus] ducreyi strain FDAARGOS_297 chromosome, complete genome	1701311	1156409	1162922	1701311		Staphylococcus_phage(50.0%)	7	NA	NA
WP_010945065.1|1156409_1157516_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	36.7	3.7e-46
WP_010945066.1|1157530_1158178_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	41.9	8.0e-41
WP_010945067.1|1158233_1159439_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	49.5	8.5e-105
WP_010945068.1|1159548_1160010_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	58.1	8.7e-42
WP_010945070.1|1160097_1160586_-	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_010945071.1|1160593_1161529_-	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	35.8	4.1e-38
WP_041603676.1|1161620_1162922_-	aminopeptidase PepB	NA	Q6GYZ8	Mycoplasma_phage	32.6	2.0e-30
>prophage 8
NZ_CP022037	[Haemophilus] ducreyi strain FDAARGOS_297 chromosome, complete genome	1701311	1520188	1537224	1701311		uncultured_virus(20.0%)	17	NA	NA
WP_010945007.1|1520188_1520698_+	peptidyl-prolyl cis-trans isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	35.4	2.5e-13
WP_010945006.1|1520801_1522040_+	multifunctional CCA addition/repair protein	NA	S5MVS8	Sinorhizobium_phage	46.0	1.6e-82
WP_010945005.1|1522052_1522862_+	glycosyltransferase family 8 protein	NA	NA	NA	NA	NA
WP_041603474.1|1522900_1523095_-	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_010945003.1|1523094_1523436_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_010945002.1|1523447_1525301_-	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	41.8	4.8e-107
WP_010945001.1|1525352_1525985_-	DUF2625 family protein	NA	NA	NA	NA	NA
WP_010945000.1|1526029_1526551_-	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA	NA
WP_010944999.1|1526559_1526883_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	46.7	9.8e-24
WP_010944998.1|1527016_1527400_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	75.8	1.7e-51
WP_010944997.1|1527447_1528668_-	IscS subfamily cysteine desulfurase	NA	A0A2K9L679	Tupanvirus	24.7	8.3e-15
WP_010944998.1|1529008_1529392_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	75.8	1.7e-51
WP_010944997.1|1529439_1530660_-	IscS subfamily cysteine desulfurase	NA	A0A2K9L679	Tupanvirus	24.7	8.3e-15
WP_010944996.1|1530713_1531166_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_041603472.1|1531593_1532931_+	outer membrane protein transport protein	NA	NA	NA	NA	NA
WP_010944993.1|1532994_1533552_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	46.1	3.8e-31
WP_010944992.1|1533627_1537224_-	exodeoxyribonuclease V subunit beta	NA	A7KV33	Bacillus_phage	21.5	1.0e-12
