assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002208645.1_ASM220864v1	NZ_CP022001	Pseudomonas aeruginosa strain Pa1207 chromosome, complete genome	1	354965-355078	1	CRISPRCasFinder	no		csa3,cas3,DEDDh,PD-DExK,WYL,RT,DinG	Orphan	GGCCAAAGAACTGGAGGGCAAGGTATGA	28	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,PD-DExK,WYL,RT,DinG	NA,NA|168aa|down_2|NZ_CP022001.1_359650_360154_-,NA|251aa|down_3|NZ_CP022001.1_361905_362658_-,NA|185aa|down_5|NZ_CP022001.1_363426_363981_-	NA|369aa|up_9|NZ_CP022001.1_340623_341730_-	PRK13551, PRK13551, agmatine deiminase; Provisional	NA|293aa|up_8|NZ_CP022001.1_341815_342694_-	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase	NA|222aa|up_7|NZ_CP022001.1_342856_343522_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|354aa|up_6|NZ_CP022001.1_343582_344644_-	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|459aa|up_5|NZ_CP022001.1_344899_346276_-	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|251aa|up_4|NZ_CP022001.1_346554_347307_+	pfam07722, Peptidase_C26, Peptidase C26	NA|453aa|up_3|NZ_CP022001.1_347347_348706_+	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|457aa|up_2|NZ_CP022001.1_348770_350141_+	PRK07480, PRK07480, putative aminotransferase; Validated	NA|368aa|up_1|NZ_CP022001.1_350256_351360_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|366aa|up_0|NZ_CP022001.1_351778_352876_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|796aa|down_0|NZ_CP022001.1_356121_358509_-	COG2366, COG2366, Protein related to penicillin acylase [General function prediction only]	NA|351aa|down_1|NZ_CP022001.1_358619_359672_+	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|168aa|down_2|NZ_CP022001.1_359650_360154_-	NA	NA|251aa|down_3|NZ_CP022001.1_361905_362658_-	NA	NA|233aa|down_4|NZ_CP022001.1_362706_363405_+	COG3751, EGL-9, Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones]	NA|185aa|down_5|NZ_CP022001.1_363426_363981_-	NA	NA|165aa|down_6|NZ_CP022001.1_364246_364741_+	COG1683, COG1683, Uncharacterized conserved protein [Function unknown]	NA|231aa|down_7|NZ_CP022001.1_364743_365436_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|257aa|down_8|NZ_CP022001.1_365507_366278_-	cd13712, PBP2_FliY, Substrate binding domain of an Escherichia coli ABC transporter; the type 2 periplasmic binding protein fold	NA|146aa|down_9|NZ_CP022001.1_366570_367008_+	pfam14347, DUF4399, Domain of unknown function (DUF4399)
GCF_002208645.1_ASM220864v1	NZ_CP022001	Pseudomonas aeruginosa strain Pa1207 chromosome, complete genome	2	1325693-1325787	2	CRISPRCasFinder	no		csa3,cas3,DEDDh,PD-DExK,WYL,RT,DinG	Orphan	ACGGTCTGTTCGCTGCCGTTGTCGGC	26	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,PD-DExK,WYL,RT,DinG	NA|208aa|up_2|NZ_CP022001.1_1323474_1324098_+,NA|205aa|down_9|NZ_CP022001.1_1334647_1335262_-	NA|168aa|up_9|NZ_CP022001.1_1316020_1316524_-	PRK13261, ureE, urease accessory protein UreE; Provisional	NA|210aa|up_8|NZ_CP022001.1_1316753_1317383_-	PRK11202, PRK11202, HTH-type transcriptional repressor FabR	NA|367aa|up_7|NZ_CP022001.1_1317541_1318642_+	cd06216, FNR_iron_sulfur_binding_2, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain	NA|371aa|up_6|NZ_CP022001.1_1318638_1319751_+	COG3239, DesA, Fatty acid desaturase [Lipid metabolism]	NA|439aa|up_5|NZ_CP022001.1_1319970_1321287_+	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily	NA|464aa|up_4|NZ_CP022001.1_1321277_1322669_-	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase	NA|230aa|up_3|NZ_CP022001.1_1322647_1323337_-	TIGR01387, Transcriptional_regulatory_protein_PcoR, heavy metal response regulator	NA|208aa|up_2|NZ_CP022001.1_1323474_1324098_+	NA	NA|205aa|up_1|NZ_CP022001.1_1324151_1324766_+	COG4117, COG4117, Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) [Energy production and conversion]	NA|256aa|up_0|NZ_CP022001.1_1324762_1325530_+	cd02108, bact_SO_family_Moco, bacterial subgroup of the sulfite oxidase (SO) family of molybdopterin binding domains	NA|178aa|down_0|NZ_CP022001.1_1326191_1326725_-	COG2193, Bfr, Bacterioferritin (cytochrome b1) [Inorganic ion transport and metabolism]	NA|690aa|down_1|NZ_CP022001.1_1327020_1329090_+	COG2982, AsmA, Uncharacterized protein involved in outer membrane biogenesis [Cell envelope biogenesis, outer membrane]	NA|271aa|down_2|NZ_CP022001.1_1329091_1329904_-	COG3708, COG3708, Uncharacterized protein conserved in bacteria [Function unknown]	NA|136aa|down_3|NZ_CP022001.1_1330050_1330458_+	pfam07498, Rho_N, Rho termination factor, N-terminal domain	NA|115aa|down_4|NZ_CP022001.1_1330501_1330846_-	PRK11251, PRK11251, osmotically-inducible lipoprotein OsmE	NA|180aa|down_5|NZ_CP022001.1_1330934_1331474_-	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown]	NA|139aa|down_6|NZ_CP022001.1_1331628_1332045_+	PRK11505, PRK11505, phosphate starvation-inducible protein PsiF	NA|422aa|down_7|NZ_CP022001.1_1332219_1333485_-	cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins	NA|288aa|down_8|NZ_CP022001.1_1333692_1334556_+	COG2513, PrpB, PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism]	NA|205aa|down_9|NZ_CP022001.1_1334647_1335262_-	NA
GCF_002208645.1_ASM220864v1	NZ_CP022001	Pseudomonas aeruginosa strain Pa1207 chromosome, complete genome	3	2068073-2068235	3	CRISPRCasFinder	no	DEDDh	csa3,cas3,DEDDh,PD-DExK,WYL,RT,DinG	Unclear	GCGGTTATTCGCCCTACACCAGGTTGGGCCAGCGGAGCGCCGGTCCGTAGGG	52	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,PD-DExK,WYL,RT,DinG	NA,NA|128aa|down_3|NZ_CP022001.1_2071706_2072090_+	NA|360aa|up_9|NZ_CP022001.1_2057611_2058691_+	COG1502, Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes [Lipid metabolism]	NA|429aa|up_8|NZ_CP022001.1_2058790_2060077_+	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism]	NA|204aa|up_7|NZ_CP022001.1_2060170_2060782_+	pfam11008, DUF2846, Protein of unknown function (DUF2846)	NA|195aa|up_6|NZ_CP022001.1_2060885_2061470_+	cd03169, GATase1_PfpI_1, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus	NA|103aa|up_5|NZ_CP022001.1_2061490_2061799_+	COG4321, COG4321, Uncharacterized protein related to arylsulfate sulfotransferase involved in siderophore biosynthesis [General function prediction only]	NA|436aa|up_4|NZ_CP022001.1_2061883_2063191_+	PRK00701, PRK00701, divalent metal cation transporter MntH	NA|508aa|up_3|NZ_CP022001.1_2063287_2064811_-	COG1951, TtdA, Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain [Energy production and conversion]	NA|376aa|up_2|NZ_CP022001.1_2065088_2066216_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|309aa|up_1|NZ_CP022001.1_2066208_2067135_+	PRK05713, PRK05713, iron-sulfur-binding ferredoxin reductase	NA|258aa|up_0|NZ_CP022001.1_2067199_2067973_+	PRK06688, PRK06688, enoyl-CoA hydratase; Provisional	NA|484aa|down_0|NZ_CP022001.1_2068273_2069725_-	PRK05826, PRK05826, pyruvate kinase; Provisional	NA|305aa|down_1|NZ_CP022001.1_2069807_2070722_-	PRK11175, PRK11175, universal stress protein UspE; Provisional	NA|269aa|down_2|NZ_CP022001.1_2070806_2071613_-	TIGR03302, OM_YfiO, outer membrane assembly lipoprotein YfiO	NA|128aa|down_3|NZ_CP022001.1_2071706_2072090_+	NA	NA|119aa|down_4|NZ_CP022001.1_2072190_2072547_+	pfam13511, DUF4124, Domain of unknown function (DUF4124)	NA|120aa|down_5|NZ_CP022001.1_2072607_2072967_+	TIGR02266, gmx_TIGR02266, Myxococcus xanthus paralogous domain TIGR02266	NA|444aa|down_6|NZ_CP022001.1_2072971_2074303_-	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only]	NA|336aa|down_7|NZ_CP022001.1_2074299_2075307_-	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|426aa|down_8|NZ_CP022001.1_2075303_2076581_-	pfam14258, DUF4350, Domain of unknown function (DUF4350)	NA|524aa|down_9|NZ_CP022001.1_2076577_2078149_-	pfam13559, DUF4129, Domain of unknown function (DUF4129)
GCF_002208645.1_ASM220864v1	NZ_CP022001	Pseudomonas aeruginosa strain Pa1207 chromosome, complete genome	4	5841583-5841685	4	CRISPRCasFinder	no	DEDDh	csa3,cas3,DEDDh,PD-DExK,WYL,RT,DinG	Unclear	GGCGTTATCCGCCGATACCCCGCCGC	26	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,PD-DExK,WYL,RT,DinG	NA|106aa|up_6|NZ_CP022001.1_5835020_5835338_-,NA|454aa|down_6|NZ_CP022001.1_5848174_5849536_+	NA|112aa|up_9|NZ_CP022001.1_5832883_5833219_+	PRK10089, PRK10089, chaperone CsaA	NA|300aa|up_8|NZ_CP022001.1_5833228_5834128_+	pfam00892, EamA, EamA-like transporter family	NA|214aa|up_7|NZ_CP022001.1_5834232_5834874_-	COG1182, AcpD, Acyl carrier protein phosphodiesterase [Lipid metabolism]	NA|106aa|up_6|NZ_CP022001.1_5835020_5835338_-	NA	NA|310aa|up_5|NZ_CP022001.1_5835537_5836467_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|276aa|up_4|NZ_CP022001.1_5836473_5837301_+	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|188aa|up_3|NZ_CP022001.1_5837282_5837846_+	PRK10903, PRK10903, peptidylprolyl isomerase A	NA|611aa|up_2|NZ_CP022001.1_5837908_5839741_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|89aa|up_1|NZ_CP022001.1_5840022_5840289_+	pfam10976, DUF2790, Protein of unknown function (DUF2790)	NA|375aa|up_0|NZ_CP022001.1_5840321_5841446_-	COG3146, COG3146, Uncharacterized protein conserved in bacteria [Function unknown]	DEDDh|209aa|down_0|NZ_CP022001.1_5841971_5842598_-	PRK09145, PRK09145, 3'-5' exonuclease	NA|600aa|down_1|NZ_CP022001.1_5842594_5844394_-	COG2905, COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms]	NA|552aa|down_2|NZ_CP022001.1_5844483_5846139_-	PRK09395, actP, cation/acetate symporter ActP	NA|104aa|down_3|NZ_CP022001.1_5846135_5846447_-	COG3162, COG3162, Predicted membrane protein [Function unknown]	NA|286aa|down_4|NZ_CP022001.1_5846664_5847522_-	cd13639, PBP2_OpuAC_like, Substrate binding domain of Lactococcus lactis ABC-type transporter OpuA and related proteins; the type 2 periplasmic binding protein fold	NA|62aa|down_5|NZ_CP022001.1_5847815_5848001_+	COG3205, COG3205, Predicted membrane protein [Function unknown]	NA|454aa|down_6|NZ_CP022001.1_5848174_5849536_+	NA	NA|268aa|down_7|NZ_CP022001.1_5849539_5850343_+	COG2853, VacJ, Surface lipoprotein [Cell envelope biogenesis, outer membrane]	NA|286aa|down_8|NZ_CP022001.1_5850483_5851341_+	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|390aa|down_9|NZ_CP022001.1_5851404_5852574_-	COG1752, RssA, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
GCF_002208645.1_ASM220864v1	NZ_CP022001	Pseudomonas aeruginosa strain Pa1207 chromosome, complete genome	5	6967923-6968030	5	CRISPRCasFinder	no		csa3,cas3,DEDDh,PD-DExK,WYL,RT,DinG	Orphan	CGGGTGCAACCGTTGCACCCCGTT	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,DEDDh,PD-DExK,WYL,RT,DinG	NA|248aa|up_8|NZ_CP022001.1_6961445_6962189_-,NA|157aa|up_7|NZ_CP022001.1_6962185_6962656_-,NA|81aa|up_6|NZ_CP022001.1_6962652_6962895_-,NA|93aa|up_2|NZ_CP022001.1_6965011_6965290_-,NA|77aa|down_0|NZ_CP022001.1_6968312_6968543_-,NA|103aa|down_1|NZ_CP022001.1_6968539_6968848_-,NA|121aa|down_2|NZ_CP022001.1_6969635_6969998_-,NA|108aa|down_3|NZ_CP022001.1_6970123_6970447_-,NA|93aa|down_4|NZ_CP022001.1_6970443_6970722_-,NA|117aa|down_5|NZ_CP022001.1_6970718_6971069_-,NA|74aa|down_6|NZ_CP022001.1_6971256_6971478_+,NA|109aa|down_7|NZ_CP022001.1_6971449_6971776_+,NA|94aa|down_9|NZ_CP022001.1_6972848_6973130_+	NA|182aa|up_9|NZ_CP022001.1_6960780_6961326_-	COG4220, COG4220, Phage DNA packaging protein, Nu1 subunit of terminase [DNA replication, recombination, and repair]	NA|248aa|up_8|NZ_CP022001.1_6961445_6962189_-	NA	NA|157aa|up_7|NZ_CP022001.1_6962185_6962656_-	NA	NA|81aa|up_6|NZ_CP022001.1_6962652_6962895_-	NA	NA|206aa|up_5|NZ_CP022001.1_6962891_6963509_-	COG3179, COG3179, Predicted chitinase [General function prediction only]	NA|111aa|up_4|NZ_CP022001.1_6963505_6963838_-	pfam05106, Phage_holin_3_1, Phage holin family (Lysis protein S)	NA|130aa|up_3|NZ_CP022001.1_6964625_6965015_-	pfam06530, Phage_antitermQ, Phage antitermination protein Q	NA|93aa|up_2|NZ_CP022001.1_6965011_6965290_-	NA	NA|466aa|up_1|NZ_CP022001.1_6965286_6966684_-	TIGR00665, DnaB, replicative DNA helicase	NA|207aa|up_0|NZ_CP022001.1_6966680_6967301_-	PRK08116, PRK08116, hypothetical protein; Validated	NA|77aa|down_0|NZ_CP022001.1_6968312_6968543_-	NA	NA|103aa|down_1|NZ_CP022001.1_6968539_6968848_-	NA	NA|121aa|down_2|NZ_CP022001.1_6969635_6969998_-	NA	NA|108aa|down_3|NZ_CP022001.1_6970123_6970447_-	NA	NA|93aa|down_4|NZ_CP022001.1_6970443_6970722_-	NA	NA|117aa|down_5|NZ_CP022001.1_6970718_6971069_-	NA	NA|74aa|down_6|NZ_CP022001.1_6971256_6971478_+	NA	NA|109aa|down_7|NZ_CP022001.1_6971449_6971776_+	NA	NA|225aa|down_8|NZ_CP022001.1_6972170_6972845_+	cd06529, S24_LexA-like, Peptidase S24 LexA-like proteins are involved in the SOS response leading to the repair of single-stranded DNA within the bacterial cell	NA|94aa|down_9|NZ_CP022001.1_6972848_6973130_+	NA
