The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP021859	Klebsiella pneumoniae strain AR_0125 chromosome, complete genome	5322544	49279	89051	5322544	integrase,transposase,terminase	uncultured_Caudovirales_phage(35.42%)	57	47360:47374	56300:56314
47360:47374	attL	AGTTGATCCTCTGGC	NA	NA	NA	NA
WP_004152144.1|49279_50041_+	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	32.5	2.4e-20
WP_004152145.1|50257_51790_+	HD domain-containing protein	NA	A0A1B1ISR1	uncultured_Mediterranean_phage	30.0	1.1e-21
WP_016197745.1|51988_52537_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
WP_004152147.1|52733_53915_+|integrase	site-specific integrase	integrase	A0A0M4QX09	Salmonella_phage	84.2	5.6e-202
WP_004152148.1|53895_54138_-	hypothetical protein	NA	A0A0M4RTZ2	Salmonella_phage	73.8	2.2e-20
WP_004152149.1|54316_54796_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004152150.1|54792_55005_-	hypothetical protein	NA	A0A286S2B6	Klebsiella_phage	98.6	3.4e-33
WP_004152151.1|55001_55226_-	hypothetical protein	NA	A0A286S2B3	Klebsiella_phage	89.2	3.1e-29
WP_004154298.1|55215_55926_-	DNA-binding protein	NA	A0A286S260	Klebsiella_phage	88.3	2.1e-111
WP_004152153.1|55931_56450_-	hypothetical protein	NA	A0A286S1S7	Klebsiella_phage	98.8	1.7e-94
56300:56314	attR	GCCAGAGGATCAACT	NA	NA	NA	NA
WP_004152154.1|56554_57382_-	hypothetical protein	NA	Q8W654	Enterobacteria_phage	84.0	5.5e-111
WP_004152155.1|57378_57573_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004152156.1|57569_57995_-	hypothetical protein	NA	A0A286S1S2	Klebsiella_phage	77.9	3.5e-53
WP_004177208.1|57991_58210_-	hypothetical protein	NA	A0A286S1P6	Klebsiella_phage	98.6	6.6e-32
WP_004152157.1|58181_58436_-	hypothetical protein	NA	A0A286SGR4	Klebsiella_phage	97.6	3.1e-41
WP_004152158.1|58428_58794_-	hypothetical protein	NA	A0A286S1Q6	Klebsiella_phage	99.2	6.9e-58
WP_004152159.1|58963_59152_-	hypothetical protein	NA	A0A286S1P8	Klebsiella_phage	100.0	4.6e-26
WP_004152160.1|59144_59459_-	hypothetical protein	NA	A0A286S1T9	Klebsiella_phage	100.0	1.0e-49
WP_004152161.1|59629_60298_-	LexA family transcriptional regulator	NA	A0A286S2B2	Klebsiella_phage	99.5	2.4e-125
WP_004152162.1|60395_60617_+	helix-turn-helix transcriptional regulator	NA	A0A286S2C1	Klebsiella_phage	100.0	3.0e-32
WP_004198228.1|61193_62852_+	DEAD/DEAH box helicase	NA	A0A286N2P9	Klebsiella_phage	96.0	0.0e+00
WP_004198233.1|62853_63816_+	zinc-binding domain of primase-helicase family protein	NA	A0A286N2Q0	Klebsiella_phage	99.4	4.8e-183
WP_004198239.1|63812_64289_+	hypothetical protein	NA	A0A286N2Q1	Klebsiella_phage	100.0	1.8e-90
WP_004152167.1|64285_65068_+	antitermination protein	NA	F1C595	Cronobacter_phage	76.8	7.2e-113
WP_004146526.1|65473_65722_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004152169.1|65724_66255_+	lysozyme	NA	K7PLY1	Enterobacteria_phage	77.1	2.7e-79
WP_004153952.1|66251_66641_+	lipase chaperone	NA	A0A192Y6H8	Salmonella_phage	49.2	9.4e-21
WP_004152170.1|66875_67196_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004152171.1|67297_68050_+	hypothetical protein	NA	A0A077KBY7	Edwardsiella_phage	66.0	4.0e-12
WP_004152172.1|68000_69401_+|terminase	PBSX family phage terminase large subunit	terminase	A0A077KAW0	Edwardsiella_phage	69.0	9.4e-188
WP_004152173.1|69638_71090_+	DUF1073 domain-containing protein	NA	A0A0M4S6U1	Salmonella_phage	68.8	3.8e-192
WP_004152174.1|71145_71694_+	hypothetical protein	NA	A0A0M4REK0	Salmonella_phage	56.3	3.0e-49
WP_004199270.1|71745_72948_+	DUF2213 domain-containing protein	NA	A0A0M4R5A6	Salmonella_phage	54.1	2.6e-106
WP_000528476.1|72951_73446_+	hypothetical protein	NA	A0A2H4JHM9	uncultured_Caudovirales_phage	62.7	4.2e-50
WP_001132269.1|73457_74399_+	DUF2184 domain-containing protein	NA	A0A2H4J191	uncultured_Caudovirales_phage	77.1	1.7e-137
WP_000725700.1|74438_74720_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000113538.1|74688_75108_+	DUF4054 domain-containing protein	NA	A0A0M5M3S2	Salmonella_phage	60.7	3.3e-40
WP_000834982.1|75104_75611_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001116156.1|75610_75997_+	hypothetical protein	NA	A0A2H4J1A4	uncultured_Caudovirales_phage	78.2	1.1e-48
WP_004152176.1|76091_76532_+	hypothetical protein	NA	A0A2H4J1A0	uncultured_Caudovirales_phage	51.7	1.6e-40
WP_004152177.1|76535_77681_+	DUF3383 domain-containing protein	NA	A0A2H4J8G4	uncultured_Caudovirales_phage	76.9	6.3e-166
WP_004152178.1|77691_77982_+	DUF3277 family protein	NA	A0A2H4J619	uncultured_Caudovirales_phage	85.5	2.6e-23
WP_085955245.1|77922_79115_-|transposase	IS3-like element ISKpn18 family transposase	transposase	U5P429	Shigella_phage	43.5	3.5e-50
WP_004152564.1|79441_79867_+	hypothetical protein	NA	A0A2H4J2V6	uncultured_Caudovirales_phage	63.4	2.6e-40
WP_004152565.1|79902_80055_+	hypothetical protein	NA	A0A2H4J1A2	uncultured_Caudovirales_phage	88.0	7.6e-19
WP_004152566.1|80044_82048_+	lytic transglycosylase domain-containing protein	NA	A0A2H4J9N7	uncultured_Caudovirales_phage	63.6	1.2e-247
WP_004152567.1|82047_82647_+	hypothetical protein	NA	A0A2H4J1B3	uncultured_Caudovirales_phage	57.6	9.9e-54
WP_004152568.1|82647_82950_+	hypothetical protein	NA	A0A2H4J495	uncultured_Caudovirales_phage	55.2	2.0e-26
WP_004152569.1|82952_83975_+	hypothetical protein	NA	A0A2H4J1B2	uncultured_Caudovirales_phage	54.2	9.2e-100
WP_004152570.1|83974_84316_+	hypothetical protein	NA	A0A2H4J1A5	uncultured_Caudovirales_phage	46.6	1.8e-23
WP_004199301.1|84365_84548_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004152571.1|84590_85157_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004152572.1|85210_85864_+	hypothetical protein	NA	A0A2H4J8H6	uncultured_Caudovirales_phage	63.5	1.0e-59
WP_004152573.1|85865_86219_+	hypothetical protein	NA	A0A2H4J629	uncultured_Caudovirales_phage	80.3	2.3e-50
WP_004152574.1|86218_87415_+	hypothetical protein	NA	A0A0M4RD32	Salmonella_phage	72.9	3.9e-158
WP_004152575.1|87411_88185_+	DUF2612 domain-containing protein	NA	A0A2H4J1A9	uncultured_Caudovirales_phage	54.4	2.8e-77
WP_004152576.1|88184_89051_+	hypothetical protein	NA	A0A2H4IYR0	uncultured_Caudovirales_phage	64.5	1.9e-34
>prophage 2
NZ_CP021859	Klebsiella pneumoniae strain AR_0125 chromosome, complete genome	5322544	310777	321664	5322544		Escherichia_phage(87.5%)	9	NA	NA
WP_002210516.1|310777_311398_-	aldolase	NA	A0A077SK32	Escherichia_phage	100.0	8.0e-115
WP_004151609.1|311390_312656_-	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	99.5	6.6e-233
WP_004151610.1|312667_313570_-	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	99.3	7.7e-159
WP_002210513.1|313830_314592_+	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	100.0	1.9e-134
WP_004176269.1|314612_315473_-	class A broad-spectrum beta-lactamase SHV-11	NA	A0A077SL40	Escherichia_phage	99.3	2.2e-155
WP_002904006.1|315770_316031_+	hypothetical protein	NA	A0A077SK33	Escherichia_phage	97.7	3.5e-40
WP_001620097.1|316117_317206_+	AAA family ATPase	NA	A0A077SLJ9	Escherichia_phage	100.0	8.0e-211
WP_004151612.1|317236_318502_-	MFS transporter	NA	NA	NA	NA	NA
WP_004151613.1|318556_321664_-	beta-galactosidase	NA	L0N6M2	Herpes_simplex_virus	59.6	0.0e+00
>prophage 3
NZ_CP021859	Klebsiella pneumoniae strain AR_0125 chromosome, complete genome	5322544	977441	1020541	5322544	tRNA,plate,transposase	Microcystis_virus(25.0%)	39	NA	NA
WP_002910404.1|977441_978698_-|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
WP_002910405.1|978968_979580_+	lipoprotein localization protein LolB	NA	NA	NA	NA	NA
WP_002910406.1|979576_980428_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
WP_002910407.1|980611_981559_+	ribose-phosphate pyrophosphokinase	NA	A0A2K9L2G2	Tupanvirus	37.5	2.3e-44
WP_004152259.1|981683_983363_+	C4-dicarboxylic acid transporter DauA	NA	A0A2H4J153	uncultured_Caudovirales_phage	23.4	7.9e-24
WP_002910436.1|983363_984410_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002910437.1|984632_984908_-	stress-induced protein YchH	NA	NA	NA	NA	NA
WP_002910438.1|985180_985765_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_002910443.1|985882_986974_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_002910446.1|987056_987266_-	DUF1869 domain-containing protein	NA	NA	NA	NA	NA
WP_002910453.1|987467_988382_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_004152260.1|988513_989929_-	membrane protein	NA	NA	NA	NA	NA
WP_004152261.1|989948_990392_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_002910493.1|990394_990931_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_002910494.1|990911_991958_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_002910495.1|991957_993721_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_004152262.1|993854_997265_-	type VI secretion protein VasK	NA	NA	NA	NA	NA
WP_004198077.1|997248_998406_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002910497.1|998409_998676_-	PAAR domain-containing protein	NA	NA	NA	NA	NA
WP_004227463.1|998973_999231_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029779706.1|999419_999656_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000019473.1|999779_1000760_-|transposase	IS5-like element ISKpn26 family transposase	transposase	Q38213	Escherichia_phage	99.1	8.9e-185
WP_004152632.1|1001096_1001987_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	A0A7H6	Microcystis_virus	29.8	4.1e-11
WP_002910539.1|1002162_1003056_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	A0A075BSL8	Microcystis_phage	27.1	2.8e-12
WP_004152633.1|1003231_1004125_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	A0A075BSL8	Microcystis_phage	27.3	1.7e-12
WP_002910544.1|1004308_1005202_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	A0A7H6	Microcystis_virus	30.5	6.7e-14
WP_004152634.1|1005223_1006663_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002910549.1|1006768_1006999_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002910551.1|1007044_1007551_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004153085.1|1007547_1007877_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004199326.1|1007873_1008056_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004153456.1|1008197_1009121_-|transposase	IS5 family transposase	transposase	Q1MVF0	Enterobacteria_phage	97.1	1.6e-172
WP_002910586.1|1010771_1011281_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002910591.1|1011517_1012024_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002910593.1|1012020_1012530_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004152319.1|1012530_1013886_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004152317.1|1016849_1018547_-	OmpA family protein	NA	NA	NA	NA	NA
WP_004152316.1|1018550_1019204_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_002910645.1|1019200_1020541_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
>prophage 4
NZ_CP021859	Klebsiella pneumoniae strain AR_0125 chromosome, complete genome	5322544	1288228	1295853	5322544		Escherichia_phage(28.57%)	7	NA	NA
WP_004152482.1|1288228_1289230_-	NAD-dependent epimerase	NA	E3T4Y8	Cafeteria_roenbergensis_virus	28.6	1.2e-30
WP_004152483.1|1289423_1290590_-	UDP-glucose 6-dehydrogenase	NA	M1I798	Paramecium_bursaria_Chlorella_virus	54.7	4.1e-112
WP_004152484.1|1290770_1291325_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	58.2	3.8e-52
WP_004152485.1|1291339_1292230_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	33.6	2.8e-28
WP_004152486.1|1292261_1293131_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	67.0	9.8e-111
WP_004152487.1|1293157_1294222_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	55.0	3.4e-105
WP_004152488.1|1294446_1295853_-	NADP-dependent phosphogluconate dehydrogenase	NA	M4QQM4	Ostreococcus_lucimarinus_virus	28.7	4.7e-38
>prophage 5
NZ_CP021859	Klebsiella pneumoniae strain AR_0125 chromosome, complete genome	5322544	1332420	1339327	5322544	tRNA	Bacillus_phage(33.33%)	6	NA	NA
WP_004151135.1|1332420_1333899_+	two-component system sensor histidine kinase BaeS	NA	W8CYF6	Bacillus_phage	28.3	1.1e-29
WP_002912634.1|1333895_1334618_+	two-component system response regulator BaeR	NA	W8CYM9	Bacillus_phage	33.2	6.4e-31
WP_002912635.1|1334936_1336298_+|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	tRNA	Q6DW11	Phage_TP	94.5	2.5e-206
WP_002912636.1|1336543_1337437_+	lipid kinase YegS	NA	A0A1V0SBJ0	Catovirus	29.8	6.1e-15
WP_002912638.1|1337679_1338453_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.3	1.5e-25
WP_004175147.1|1338463_1339327_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	27.5	5.7e-10
>prophage 6
NZ_CP021859	Klebsiella pneumoniae strain AR_0125 chromosome, complete genome	5322544	1668040	1712883	5322544	holin,integrase,tail,terminase	Salmonella_phage(40.43%)	54	1660832:1660846	1710303:1710317
1660832:1660846	attL	GCCGCTTCCGCCACC	NA	NA	NA	NA
WP_004152009.1|1668040_1669909_+	sulfatase-like hydrolase/transferase	NA	A0A2P0VMN7	Tetraselmis_virus	22.6	2.6e-07
WP_004152707.1|1670128_1670611_-	DUF2514 domain-containing protein	NA	Q858E9	Salmonella_phage	80.6	3.0e-61
WP_004152706.1|1670607_1671237_-	glycoside hydrolase family 19 protein	NA	Q858F0	Salmonella_phage	76.4	3.1e-90
WP_004146393.1|1671226_1671532_-|holin	phage holin family protein	holin	A0A193GYK3	Enterobacter_phage	82.4	2.7e-39
WP_004146394.1|1671518_1671923_-	membrane protein	NA	T1SA79	Salmonella_phage	84.1	9.3e-56
WP_004152705.1|1672207_1673149_-	hypothetical protein	NA	A0A2H5BN49	Klebsiella_phage	89.4	2.8e-164
WP_004152432.1|1674730_1675027_+	hypothetical protein	NA	A0A0F6R8M4	Escherichia_coli_O157_typing_phage	64.0	1.1e-24
WP_004152433.1|1675341_1676031_+	hypothetical protein	NA	G9L6E2	Escherichia_phage	65.2	1.6e-79
WP_071531206.1|1676116_1676500_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004152434.1|1676642_1679408_-	hypothetical protein	NA	Q858F8	Salmonella_phage	94.5	0.0e+00
WP_004152435.1|1679407_1681318_-	hypothetical protein	NA	Q858F9	Salmonella_phage	81.9	5.2e-290
WP_004152436.1|1681317_1684149_-	hypothetical protein	NA	Q858G0	Salmonella_phage	75.7	0.0e+00
WP_004152437.1|1684159_1684699_-	hypothetical protein	NA	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	80.0	6.1e-71
WP_004152438.1|1684698_1685163_-	hypothetical protein	NA	Q858G2	Salmonella_phage	81.2	1.5e-70
WP_004152439.1|1685162_1687661_-	hypothetical protein	NA	Q858G3	Salmonella_phage	84.0	0.0e+00
WP_004152440.1|1687660_1688266_-	hypothetical protein	NA	A0A0F6TJN5	Escherichia_coli_O157_typing_phage	78.5	2.8e-88
WP_004152441.1|1688265_1688589_-	hypothetical protein	NA	G9L6C8	Escherichia_phage	85.0	5.3e-46
WP_004152442.1|1688639_1688981_-	hypothetical protein	NA	G9L6C7	Escherichia_phage	70.8	4.0e-36
WP_004152443.1|1688991_1689429_-	hypothetical protein	NA	A0A193GYT9	Enterobacter_phage	91.0	4.8e-66
WP_004152444.1|1689482_1690469_-	hypothetical protein	NA	A0A193GZ49	Enterobacter_phage	93.9	1.6e-178
WP_004152445.1|1690483_1691164_-	peptidase	NA	G9L6C4	Escherichia_phage	83.5	4.0e-75
WP_004152446.1|1691166_1691463_-	hypothetical protein	NA	T1SBI9	Salmonella_phage	70.4	1.2e-33
WP_004152447.1|1691459_1693142_-|tail	tail protein	tail	A0A0F6TJD8	Escherichia_coli_O157_typing_phage	84.6	2.3e-265
WP_004141368.1|1693156_1693363_-	hypothetical protein	NA	T1SA67	Salmonella_phage	88.2	4.8e-08
WP_004152449.1|1694164_1694476_+	hypothetical protein	NA	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	45.2	2.5e-16
WP_004154331.1|1694542_1696018_-	hypothetical protein	NA	Q858H3	Salmonella_phage	93.1	3.8e-280
WP_004152523.1|1696014_1696599_-|terminase	terminase small subunit	terminase	T1SBI8	Salmonella_phage	88.1	2.4e-89
WP_004152524.1|1696676_1696934_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004152525.1|1697008_1697347_-	hypothetical protein	NA	A0A193GYX4	Enterobacter_phage	80.0	4.7e-45
WP_004152526.1|1697346_1697586_-	hypothetical protein	NA	G8C7S3	Escherichia_phage	48.0	4.6e-10
WP_004152527.1|1697578_1698247_-	DUF551 domain-containing protein	NA	Q6UAT8	Klebsiella_phage	52.5	1.5e-05
WP_004141386.1|1698243_1698456_-	hypothetical protein	NA	A0A0F6TJE4	Escherichia_coli_O157_typing_phage	45.5	8.1e-11
WP_004152529.1|1698626_1699370_-	hypothetical protein	NA	A6N3G8	Burkholderia_virus	59.5	1.5e-19
WP_004152530.1|1699366_1699792_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004152531.1|1699788_1699980_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004152532.1|1699963_1700374_-	hypothetical protein	NA	A0A2P1MXC5	Escherichia_phage	42.2	3.1e-14
WP_004152534.1|1700566_1700914_-	DUF1064 domain-containing protein	NA	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	82.6	5.0e-50
WP_004152535.1|1701033_1701819_-	replication protein	NA	A0A193GYX1	Enterobacter_phage	87.4	8.2e-133
WP_004207253.1|1701815_1702583_-	hypothetical protein	NA	A0A193GZ86	Enterobacter_phage	91.4	8.9e-140
WP_004152537.1|1702582_1702792_-	hypothetical protein	NA	A0A193GYW4	Enterobacter_phage	78.3	1.8e-26
WP_004152538.1|1702938_1703172_-	hypothetical protein	NA	T1SAR5	Salmonella_phage	66.2	9.2e-24
WP_004152539.1|1703325_1703907_+	helix-turn-helix transcriptional regulator	NA	Q858D7	Salmonella_phage	64.8	1.9e-65
WP_004164029.1|1704273_1704573_+	hypothetical protein	NA	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	54.5	2.1e-20
WP_004152541.1|1704569_1705469_+	endonuclease	NA	Q858E0	Salmonella_phage	93.0	1.5e-159
WP_004152542.1|1705478_1706501_+	recombination protein RecT	NA	Q858E1	Salmonella_phage	95.3	2.4e-180
WP_004152543.1|1706552_1706801_+	AlpA family phage regulatory protein	NA	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	69.5	1.1e-27
WP_004153052.1|1706910_1707204_+	PerC family transcriptional regulator	NA	T1S9J5	Salmonella_phage	71.1	8.9e-32
WP_004152545.1|1707196_1707355_+	DUF1317 family protein	NA	T1SAR0	Salmonella_phage	78.8	1.9e-17
WP_004152546.1|1707351_1707945_+	adenine methylase	NA	T1SA14	Salmonella_phage	92.4	4.3e-110
WP_004152547.1|1707941_1708124_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004152548.1|1708120_1708312_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004152549.1|1708328_1709579_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1X9TCT6	Enterobacter_phage	85.3	1.4e-206
WP_004151979.1|1709771_1711349_-	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA	NA
1710303:1710317	attR	GGTGGCGGAAGCGGC	NA	NA	NA	NA
WP_004151980.1|1711416_1712883_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	38.7	1.2e-87
>prophage 7
NZ_CP021859	Klebsiella pneumoniae strain AR_0125 chromosome, complete genome	5322544	1784233	1863843	5322544	integrase,tail,head,portal,tRNA,plate,capsid,coat,lysis,terminase	Salmonella_phage(71.43%)	86	1828937:1828983	1865504:1865550
WP_002914079.1|1784233_1784971_-|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	tRNA	NA	NA	NA	NA
WP_002914082.1|1785102_1786434_+	ATP-dependent RNA helicase SrmB	NA	E3T5E1	Cafeteria_roenbergensis_virus	31.9	6.2e-48
WP_002914084.1|1786479_1786863_-	autonomous glycyl radical cofactor GrcA	NA	A0A193GZ98	Escherichia_phage	79.3	4.0e-32
WP_002914088.1|1787176_1787866_+	uracil-DNA glycosylase	NA	A0A077BCN4	Equid_alphaherpesvirus	53.0	1.3e-57
WP_002914089.1|1787923_1789009_-|tRNA	tRNA/rRNA methyltransferase	tRNA	NA	NA	NA	NA
WP_002914091.1|1789212_1789638_+	thioredoxin TrxC	NA	A0A1J0GW78	Streptomyces_phage	40.2	6.0e-13
WP_002914092.1|1789707_1790406_+	DTW domain-containing protein	NA	NA	NA	NA	NA
WP_004151994.1|1790440_1793101_+	protein lysine acetyltransferase	NA	NA	NA	NA	NA
WP_002914094.1|1793221_1794577_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_002914095.1|1794618_1794942_+	YfiM family lipoprotein	NA	NA	NA	NA	NA
WP_002914097.1|1794945_1796244_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	31.5	3.1e-44
WP_004150973.1|1802209_1804783_-	ATP-dependent chaperone ClpB	NA	H6X3M6	Enterobacteria_phage	35.4	6.9e-128
WP_002914109.1|1804912_1805644_-	polyphenol oxidase	NA	NA	NA	NA	NA
WP_002914110.1|1805640_1806621_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA	NA
WP_004145664.1|1806752_1807490_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_002914111.1|1807760_1808096_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA	NA
WP_100250063.1|1808202_1808250_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004150975.1|1808350_1809511_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA	NA
WP_002914112.1|1809507_1810380_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA	NA
WP_002914113.1|1810442_1811564_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA	NA
WP_002914114.1|1811573_1812644_-	3-deoxy-7-phosphoheptulonate synthase AroF	NA	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	51.5	1.8e-90
WP_004174804.1|1812986_1813496_+	YfiR family protein	NA	NA	NA	NA	NA
WP_002914116.1|1813488_1814712_+	diguanylate cyclase DgcN	NA	NA	NA	NA	NA
WP_002914117.1|1814725_1815208_+	OmpA family protein	NA	NA	NA	NA	NA
WP_002914118.1|1815216_1816587_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_002914119.1|1816643_1817102_-	DUF2946 domain-containing protein	NA	NA	NA	NA	NA
WP_002914145.1|1817221_1817569_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_002914147.1|1817608_1818376_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_004150977.1|1818407_1818956_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_002914149.1|1818974_1819223_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_002914152.1|1819482_1820847_-	signal recognition particle protein	NA	NA	NA	NA	NA
WP_002914153.1|1821010_1821802_+	inner membrane protein YpjD	NA	NA	NA	NA	NA
WP_004149392.1|1821821_1823108_+	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_002914155.1|1823227_1823818_-	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_002914158.1|1823942_1824821_+	NAD(+) kinase	NA	NA	NA	NA	NA
WP_002914159.1|1824907_1826569_+	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_002914160.1|1826716_1827058_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
WP_002914161.1|1827124_1827415_-	RnfH family protein	NA	NA	NA	NA	NA
WP_004188817.1|1827404_1827881_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_002914164.1|1827991_1828474_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	47.4	2.3e-29
1828937:1828983	attL	ATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAA	NA	NA	NA	NA
WP_004150980.1|1829077_1829455_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004150981.1|1829482_1829701_-	positive regulator of late gene transcription	NA	Q53ZE7	Salmonella_virus	72.2	1.9e-26
WP_004150982.1|1829767_1830862_-	phage late control D family protein	NA	E5G6Q3	Salmonella_phage	83.6	2.4e-170
WP_004150983.1|1830858_1831344_-|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	80.1	5.2e-61
WP_004150984.1|1831340_1833971_-|tail	phage tail tape measure protein	tail	E5FFG5	Burkholderia_phage	41.9	8.9e-115
WP_002896220.1|1833963_1834083_-|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	87.2	2.2e-13
WP_004150985.1|1834097_1834397_-|tail	phage tail assembly protein	tail	E5G6P9	Salmonella_phage	78.0	8.2e-33
WP_004150986.1|1834449_1834965_-|tail	phage major tail tube protein	tail	E5G6P8	Salmonella_phage	84.2	1.4e-80
WP_004150987.1|1834974_1836147_-|tail	phage tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	91.5	3.4e-207
WP_004150988.1|1836295_1837369_-|tail	phage tail protein	tail	A0A1S6KZZ8	Salmonella_phage	53.6	6.6e-40
WP_004200602.1|1837420_1838539_-	hypothetical protein	NA	A0A248XD67	Klebsiella_phage	38.0	4.4e-55
WP_004150990.1|1838548_1840498_-|coat	spore coat protein CotH	coat	Q6QI97	Burkholderia_phage	38.9	1.0e-06
WP_004152935.1|1840499_1841171_-|tail	phage tail protein I	tail	A0A1S6L000	Salmonella_phage	58.9	3.2e-61
WP_004150992.1|1841163_1842072_-|plate	baseplate assembly protein	plate	E5G6N8	Salmonella_phage	68.9	1.9e-109
WP_004150993.1|1842058_1842421_-|plate	baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	85.6	8.4e-48
WP_004150994.1|1842417_1842990_-|plate	phage baseplate assembly protein V	plate	E5G6N6	Salmonella_phage	70.8	1.4e-76
WP_004150995.1|1843084_1843951_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004150996.1|1843973_1844420_-	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	72.3	2.5e-54
WP_004150997.1|1844412_1844835_-|tail	phage tail protein	tail	A0A1S6KZY0	Salmonella_phage	83.2	8.2e-63
WP_004150998.1|1844930_1845359_-|lysis	LysB family phage lysis regulatory protein	lysis	A0A1S6KZX8	Salmonella_phage	82.5	7.1e-54
WP_004150999.1|1845355_1845739_-	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	45.4	1.9e-18
WP_004151000.1|1845743_1846253_-	lysozyme	NA	E5G6N1	Salmonella_phage	85.2	1.6e-81
WP_004134639.1|1846233_1846449_-	hypothetical protein	NA	E5G6N0	Salmonella_phage	88.7	6.1e-30
WP_004151001.1|1846452_1846656_-|tail	tail protein X	tail	E5G6M9	Salmonella_phage	89.6	9.8e-30
WP_004151002.1|1846655_1847120_-|head	head completion/stabilization protein	head	A0A1S6KZW8	Salmonella_phage	85.7	1.5e-73
WP_004134644.1|1847215_1847869_-|terminase	terminase endonuclease subunit	terminase	A0A1S6KZX1	Salmonella_phage	80.0	1.9e-90
WP_004151003.1|1847872_1848925_-|capsid	phage major capsid protein, P2 family	capsid	A0A1S6KZZ3	Salmonella_phage	91.0	6.8e-175
WP_004151004.1|1848941_1849775_-|capsid	GPO family capsid scaffolding protein	capsid	A0A1S6KZW9	Salmonella_phage	77.6	4.4e-100
WP_019405037.1|1849915_1851679_+|terminase	terminase ATPase subunit family protein	terminase	A0A1S6KZW3	Salmonella_phage	91.8	0.0e+00
WP_004151006.1|1851678_1852722_+|portal	phage portal protein	portal	A0A1S6KZW5	Salmonella_phage	85.6	3.1e-172
WP_024940854.1|1852778_1853048_-	hypothetical protein	NA	D2IZW1	Enterococcus_phage	41.3	1.4e-15
WP_004151007.1|1853569_1854571_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004151008.1|1854570_1855650_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004151009.1|1855636_1856320_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004151010.1|1856415_1856649_-	DinI family protein	NA	A0A0M4S6H1	Salmonella_phage	96.1	2.0e-34
WP_004151011.1|1856660_1856849_-	hypothetical protein	NA	A0A1S6L006	Salmonella_phage	90.3	2.2e-23
WP_004151012.1|1857011_1859396_-	replication endonuclease	NA	A0A1S6L028	Salmonella_phage	87.9	0.0e+00
WP_004151013.1|1859392_1860244_-	DNA adenine methylase	NA	A0A1S6L011	Salmonella_phage	75.4	2.2e-115
WP_004151014.1|1860240_1860468_-	TraR/DksA family transcriptional regulator	NA	A0A1S6L007	Salmonella_phage	92.0	5.1e-35
WP_004151016.1|1860467_1860701_-	DUF2732 family protein	NA	A0A1S6L021	Salmonella_phage	90.9	6.0e-31
WP_004144796.1|1860768_1861107_-	DUF5347 domain-containing protein	NA	A0A218M4I7	Erwinia_phage	58.0	6.2e-29
WP_004151017.1|1861070_1861271_-	DUF2724 domain-containing protein	NA	A0A1S6L005	Salmonella_phage	68.8	4.5e-19
WP_004151018.1|1861278_1861788_-	phage regulatory CII family protein	NA	A0A1S6L008	Salmonella_phage	85.8	1.1e-77
WP_001397669.1|1861820_1862063_-	hypothetical protein	NA	A0A1S6KZZ6	Salmonella_phage	98.8	4.0e-38
WP_004151019.1|1862185_1862815_+	phage repressor protein CI	NA	A0A1S6KZZ7	Salmonella_phage	54.5	1.4e-61
WP_004151020.1|1862817_1863843_+|integrase	site-specific integrase	integrase	A0A1S6L016	Salmonella_phage	93.8	1.5e-190
1865504:1865550	attR	ATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAA	NA	NA	NA	NA
>prophage 8
NZ_CP021859	Klebsiella pneumoniae strain AR_0125 chromosome, complete genome	5322544	2582999	2631842	5322544	protease,tail,head,portal,tRNA,capsid,terminase	uncultured_Caudovirales_phage(66.67%)	54	NA	NA
WP_002918465.1|2582999_2583494_-|protease	ClpXP protease specificity-enhancing factor	protease	A0A1S5R3H3	Pseudomonas_phage	54.8	1.5e-26
WP_002918467.1|2583497_2584136_-	stringent starvation protein A	NA	NA	NA	NA	NA
WP_000829818.1|2584447_2584840_-	30S ribosomal protein S9	NA	NA	NA	NA	NA
WP_002918559.1|2584855_2585284_-	50S ribosomal protein L13	NA	NA	NA	NA	NA
WP_004144945.1|2585549_2586677_-	cell division protein ZapE	NA	NA	NA	NA	NA
WP_002918565.1|2586867_2587266_+	DUF1043 family protein	NA	NA	NA	NA	NA
WP_002918566.1|2587439_2588807_+|protease	serine endoprotease DegQ	protease	A0A1B1IT49	uncultured_Mediterranean_phage	25.3	6.0e-22
WP_002918568.1|2588894_2589953_+	outer membrane-stress sensor serine endopeptidase DegS	NA	NA	NA	NA	NA
WP_002918570.1|2590089_2591028_-	malate dehydrogenase	NA	NA	NA	NA	NA
WP_002918625.1|2591442_2591913_+	transcriptional regulator ArgR	NA	NA	NA	NA	NA
WP_002918626.1|2592288_2592552_+	peroxide/acid stress response protein YhcN	NA	NA	NA	NA	NA
WP_002918627.1|2592650_2592917_+	peroxide/acid stress response protein YhcN	NA	NA	NA	NA	NA
WP_002918629.1|2592967_2593243_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002918632.1|2593322_2595290_-	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA	NA
WP_002918639.1|2595295_2596228_-	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA	NA
WP_002918640.1|2596235_2596439_-	AaeX family protein	NA	NA	NA	NA	NA
WP_002918641.1|2596570_2597500_+	HTH-type transcriptional activator AaeR	NA	NA	NA	NA	NA
WP_002918642.1|2597535_2598981_-|protease	metalloprotease TldD	protease	NA	NA	NA	NA
WP_004150952.1|2599069_2602867_-	AsmA2 domain-containing protein	NA	NA	NA	NA	NA
WP_002918644.1|2602904_2604374_-	ribonuclease G	NA	NA	NA	NA	NA
WP_002918646.1|2604376_2604958_-	septum formation inhibitor Maf	NA	NA	NA	NA	NA
WP_002918648.1|2604965_2605454_-	rod shape-determining protein MreD	NA	NA	NA	NA	NA
WP_004149974.1|2605453_2606446_-	rod shape-determining protein MreC	NA	NA	NA	NA	NA
WP_002918653.1|2606516_2607560_-	rod shape-determining protein	NA	F2Y0P3	Organic_Lake_phycodnavirus	22.3	6.7e-05
WP_002918686.1|2607865_2609806_-	RNase E specificity factor CsrD	NA	NA	NA	NA	NA
WP_002918687.1|2609885_2610077_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002918688.1|2610305_2611307_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA	NA
WP_002918689.1|2611306_2611915_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA	NA
WP_002918732.1|2612138_2612591_+	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA	NA
WP_002918736.1|2612613_2613081_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_002918738.1|2613091_2614441_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_002918740.1|2614551_2614794_+	YhdT family protein	NA	NA	NA	NA	NA
WP_002918742.1|2614783_2616235_+	sodium/pantothenate symporter	NA	NA	NA	NA	NA
WP_002918745.1|2616246_2617128_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA	NA
WP_004144972.1|2617485_2618451_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
WP_000462905.1|2618475_2618772_+	DNA-binding transcriptional regulator Fis	NA	NA	NA	NA	NA
WP_004150954.1|2618925_2619117_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004150955.1|2619119_2620781_-|terminase	terminase large subunit	terminase	A0A2H4JB64	uncultured_Caudovirales_phage	98.0	0.0e+00
WP_000113647.1|2620764_2621121_-|terminase	phage terminase small subunit P27 family	terminase	A0A2H4JHS3	uncultured_Caudovirales_phage	99.2	5.5e-60
WP_004150959.1|2621396_2621840_-	HNH endonuclease	NA	A0A2H4JAS8	uncultured_Caudovirales_phage	91.8	2.8e-77
WP_001547824.1|2621839_2622139_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2H4JD08	uncultured_Caudovirales_phage	80.8	3.4e-39
WP_004150961.1|2622135_2622471_-|head	phage head closure protein	head	A0A2H4JHK5	uncultured_Caudovirales_phage	57.8	3.7e-26
WP_004150962.1|2622467_2623709_-|portal	phage portal protein	portal	A0A2H4JFJ9	uncultured_Caudovirales_phage	96.5	1.0e-230
WP_001547826.1|2623710_2624271_-|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	95.7	1.2e-98
WP_001549743.1|2624322_2625489_-|capsid	phage major capsid protein	capsid	A0A2H4JED2	uncultured_Caudovirales_phage	95.9	9.8e-207
WP_004150963.1|2625752_2626265_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004150964.1|2626313_2626649_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004150965.1|2626991_2629127_-	DUF927 domain-containing protein	NA	A0A1W6JPG0	Morganella_phage	62.4	3.4e-205
WP_001549749.1|2629126_2629492_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004150966.1|2629488_2629857_-	hypothetical protein	NA	A0A2H4JCX7	uncultured_Caudovirales_phage	81.1	3.7e-51
WP_004150967.1|2629853_2630168_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001549752.1|2630160_2630349_-	hypothetical protein	NA	NA	NA	NA	NA
WP_106918304.1|2630341_2630611_-	host cell division inhibitor Icd-like protein	NA	A0A2H4JGW3	uncultured_Caudovirales_phage	94.4	2.4e-44
WP_004150969.1|2631062_2631842_-	hypothetical protein	NA	Q8HA02	Enterobacteria_phage	51.5	6.2e-40
>prophage 9
NZ_CP021859	Klebsiella pneumoniae strain AR_0125 chromosome, complete genome	5322544	4196258	4207912	5322544	integrase	Enterobacteria_phage(70.0%)	13	4184392:4184406	4207449:4207463
4184392:4184406	attL	AGCGCGGAGAGATTG	NA	NA	NA	NA
WP_002889890.1|4196258_4198592_-	DNA primase	NA	Q7M2A8	Enterobacteria_phage	82.2	0.0e+00
WP_002889897.1|4198603_4198924_-	DUF5375 domain-containing protein	NA	NA	NA	NA	NA
WP_002889911.1|4198920_4199148_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024940872.1|4199144_4199702_-	ash family protein	NA	Q7M2A7	Enterobacteria_phage	70.4	1.8e-33
WP_002889915.1|4199698_4199965_-	AlpA family transcriptional regulator	NA	Q7M299	Enterobacteria_phage	71.6	2.6e-30
WP_002889917.1|4200506_4201244_+	hypothetical protein	NA	Q7M2A2	Enterobacteria_phage	60.7	9.0e-73
WP_002889919.1|4201240_4201486_+	hypothetical protein	NA	Q7M294	Enterobacteria_phage	58.0	1.9e-19
WP_002889930.1|4201503_4202070_+	phage polarity suppression protein	NA	Q7M2A1	Enterobacteria_phage	64.3	1.5e-59
WP_004152979.1|4202638_4203064_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004152029.1|4203063_4204014_-	cobyrinic acid a,c-diamide synthase	NA	A0A1X9IGI7	Lactococcus_phage	27.1	1.2e-13
WP_002889938.1|4204001_4205192_-|integrase	tyrosine-type recombinase/integrase	integrase	Q7M297	Enterobacteria_phage	62.7	6.4e-145
WP_002889940.1|4205544_4206798_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	44.9	8.9e-89
WP_004144574.1|4206808_4207912_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.5	4.8e-62
4207449:4207463	attR	AGCGCGGAGAGATTG	NA	NA	NA	NA
>prophage 10
NZ_CP021859	Klebsiella pneumoniae strain AR_0125 chromosome, complete genome	5322544	4867169	4904505	5322544	integrase,tail,head,portal,plate,capsid,lysis,terminase	Salmonella_phage(84.62%)	46	4867077:4867095	4904577:4904595
4867077:4867095	attL	CAGGCAACAAAAAACCCAT	NA	NA	NA	NA
WP_004151720.1|4867169_4868222_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A218M4I3	Erwinia_phage	57.0	1.0e-106
WP_004152765.1|4868640_4870125_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
WP_004150866.1|4870223_4871168_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004152885.1|4871179_4872058_-	phage repressor protein CI	NA	A0A1S6KZZ7	Salmonella_phage	39.9	1.7e-30
WP_000188448.1|4872203_4872425_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000460893.1|4872457_4872967_+	phage regulatory CII family protein	NA	E5G6L3	Salmonella_phage	98.8	5.8e-87
WP_000956179.1|4872974_4873175_+	DUF2724 domain-containing protein	NA	E5G6L4	Salmonella_phage	97.0	1.6e-32
WP_000963473.1|4873138_4873480_+	DUF5347 domain-containing protein	NA	E5G6L5	Salmonella_phage	99.1	4.6e-56
WP_004150864.1|4873547_4873781_+	DUF2732 family protein	NA	E5G6L6	Salmonella_phage	96.1	4.1e-32
WP_000752622.1|4873780_4874008_+	TraR/DksA family transcriptional regulator	NA	E5G6L7	Salmonella_phage	98.7	6.0e-36
WP_004150863.1|4874004_4874862_+	DNA adenine methylase	NA	E5G6L8	Salmonella_phage	95.4	2.0e-156
WP_004150862.1|4874858_4877273_+	replication endonuclease	NA	E5G6L9	Salmonella_phage	97.5	0.0e+00
WP_001154434.1|4877426_4877615_+	hypothetical protein	NA	E5G6M0	Salmonella_phage	98.4	5.5e-27
WP_001217575.1|4877625_4877859_+	DinI family protein	NA	E5G6M1	Salmonella_phage	100.0	4.7e-36
WP_000700647.1|4877973_4878651_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004199124.1|4878926_4880669_+	AIPR family protein	NA	NA	NA	NA	NA
WP_002895959.1|4880730_4881756_-|portal	phage portal protein	portal	A0A1S6KZW5	Salmonella_phage	86.7	7.6e-171
WP_004150858.1|4881755_4883522_-|terminase	terminase ATPase subunit family protein	terminase	A0A1S6KZW3	Salmonella_phage	99.0	0.0e+00
WP_002895967.1|4883664_4884498_+|capsid	GPO family capsid scaffolding protein	capsid	A0A1S6KZW9	Salmonella_phage	88.8	6.3e-123
WP_002895972.1|4884514_4885573_+|capsid	phage major capsid protein, P2 family	capsid	E5G6M6	Salmonella_phage	93.1	1.1e-180
WP_000059191.1|4885576_4886227_+|terminase	terminase endonuclease subunit	terminase	E5G6M7	Salmonella_phage	96.3	8.7e-112
WP_002896151.1|4886322_4886787_+|head	head completion/stabilization protein	head	A0A1S6KZW8	Salmonella_phage	89.0	8.4e-77
WP_002896155.1|4886786_4886990_+|tail	tail protein X	tail	A0A1S6KZY4	Salmonella_phage	88.1	1.3e-29
WP_002896158.1|4886993_4887209_+	hypothetical protein	NA	E5G6N0	Salmonella_phage	90.1	3.6e-30
WP_002896161.1|4887189_4887699_+	lysozyme	NA	E5G6N1	Salmonella_phage	83.4	2.1e-81
WP_002896163.1|4887703_4888087_+	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	42.0	2.1e-17
WP_002896168.1|4888083_4888512_+|lysis	LysB family phage lysis regulatory protein	lysis	A0A1S6KZX8	Salmonella_phage	77.9	9.6e-51
WP_002896172.1|4888607_4889039_+|tail	phage tail protein	tail	A0A1S6KZY0	Salmonella_phage	82.5	9.9e-64
WP_002896175.1|4889031_4889478_+	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	71.2	2.2e-50
WP_004150857.1|4889474_4890167_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002896177.1|4890261_4890834_+|plate	phage baseplate assembly protein V	plate	E5G6N6	Salmonella_phage	72.3	4.7e-77
WP_002896179.1|4890830_4891193_+|plate	baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	84.7	5.8e-49
WP_002896182.1|4891179_4892088_+|plate	baseplate assembly protein	plate	E5G6N8	Salmonella_phage	66.9	7.6e-106
WP_004150856.1|4892080_4892680_+|tail	phage tail protein I	tail	A0A1S6L000	Salmonella_phage	60.5	1.3e-58
WP_004152882.1|4892681_4895633_+	hypothetical protein	NA	A0A2H4N7A3	Pectobacterium_phage	50.9	1.2e-06
WP_002896186.1|4895636_4896368_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002896188.1|4896364_4896568_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002896191.1|4896597_4897674_+|tail	phage tail protein	tail	Q37842	Escherichia_phage	44.8	1.2e-25
WP_002896193.1|4897812_4898985_+|tail	phage tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	93.3	1.9e-210
WP_002896201.1|4898994_4899510_+|tail	phage major tail tube protein	tail	E5G6P8	Salmonella_phage	85.4	1.3e-81
WP_002896204.1|4899562_4899862_+|tail	phage tail assembly protein	tail	E5G6P9	Salmonella_phage	79.0	3.7e-33
WP_002896220.1|4899876_4899996_+|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	87.2	2.2e-13
WP_002896222.1|4899988_4902616_+|tail	phage tail tape measure protein	tail	E5FFG5	Burkholderia_phage	42.0	5.6e-117
WP_002896224.1|4902612_4903098_+|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	75.6	7.2e-63
WP_002896225.1|4903094_4904195_+	phage late control D family protein	NA	A0A1S6KZZ5	Salmonella_phage	87.4	4.9e-176
WP_000972391.1|4904286_4904505_+	transcriptional activator Ogr/delta	NA	Q53ZE7	Salmonella_virus	69.0	7.5e-20
4904577:4904595	attR	CAGGCAACAAAAAACCCAT	NA	NA	NA	NA
>prophage 11
NZ_CP021859	Klebsiella pneumoniae strain AR_0125 chromosome, complete genome	5322544	4938921	4948385	5322544	tRNA,protease	Dickeya_phage(16.67%)	8	NA	NA
WP_002896440.1|4938921_4940037_+	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	52.7	1.3e-06
WP_004150848.1|4940033_4941974_+	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	40.5	1.9e-37
WP_002896516.1|4942050_4942272_-	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	61.2	1.3e-16
WP_002896520.1|4942597_4942915_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	2.0e-13
WP_002896522.1|4942945_4945225_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.0	1.6e-165
WP_001040187.1|4945345_4945564_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_002898014.1|4945917_4946619_-|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
WP_004150847.1|4946663_4948385_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	A0A2R8FG22	Brazilian_cedratvirus	34.3	1.5e-14
>prophage 1
NZ_CP021856	Klebsiella pneumoniae strain AR_0125 plasmid tig00000001_pilon, complete sequence	146168	0	37425	146168	transposase,integrase,protease	Escherichia_phage(35.71%)	34	332:346	17673:17687
332:346	attL	TTCGTGGTACAGCAG	NA	NA	NA	NA
WP_000147567.1|2559_3120_-	recombinase family protein	NA	A0A1B0V7I5	Salmonella_phage	86.2	4.0e-49
WP_000454193.1|3245_3596_-	DUF3330 domain-containing protein	NA	NA	NA	NA	NA
WP_000845039.1|3798_4812_-|integrase	class 1 integron integrase IntI1	integrase	A0A1P8DJJ6	Virus_Rctr41k	45.5	1.0e-71
WP_001083725.1|4956_5454_+	trimethoprim-resistant dihydrofolate reductase DfrA12	NA	A0A0A0PL85	Bacillus_phage	40.9	7.5e-23
WP_001336345.1|5565_5856_+	DUF1010 domain-containing protein	NA	NA	NA	NA	NA
WP_001206356.1|5861_6653_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA	NA
WP_000679427.1|6816_7164_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA	NA
WP_000259031.1|7157_7997_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	A0A0B5J4J5	Pandoravirus	27.2	5.0e-11
WP_000376616.1|8124_8328_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000184001.1|8483_9689_+	chromate efflux transporter	NA	NA	NA	NA	NA
WP_000130000.1|9699_10005_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_001389365.1|10231_10996_+|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
WP_001137892.1|11488_12073_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000004159.1|12072_13311_-	MFS transporter	NA	NA	NA	NA	NA
WP_000219391.1|13307_14213_-	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA	NA
WP_001067855.1|14334_15039_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_000018329.1|15189_16005_+	aminoglycoside O-phosphotransferase APH(3')-Ia	NA	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	100.0	6.1e-163
WP_044117068.1|16194_16863_-|transposase	IS6 family transposase	transposase	A0A077SL39	Escherichia_phage	99.5	1.9e-130
WP_001067855.1|18166_18871_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
17673:17687	attR	TTCGTGGTACAGCAG	NA	NA	NA	NA
WP_004153729.1|19726_20554_+	phosphonate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.6	2.6e-20
WP_004152695.1|20550_21414_+	phosphate/phosphite/phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_004152694.1|21422_22250_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_004152693.1|22258_23269_+	phosphonate dehydrogenase PtxD	NA	A0A1V0SBV6	Catovirus	25.1	1.4e-15
WP_004152692.1|23262_24132_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000019473.1|25340_26321_-|transposase	IS5-like element ISKpn26 family transposase	transposase	Q38213	Escherichia_phage	99.1	8.9e-185
WP_004118209.1|27522_27786_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_004118208.1|27800_28064_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004152118.1|28307_28589_+	helix-turn-helix domain-containing protein	NA	A0A1B1IUF9	uncultured_Mediterranean_phage	38.2	5.2e-05
WP_004152117.1|28623_29193_+	small heat shock protein sHSP20	NA	NA	NA	NA	NA
WP_004152116.1|29307_32103_+	heat shock survival AAA family ATPase ClpK	NA	K4FB40	Cronobacter_phage	41.0	5.2e-129
WP_004152115.1|32102_32300_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009483782.1|32537_33287_+	diguanylate cyclase	NA	NA	NA	NA	NA
WP_004152113.1|33273_34236_+|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_020314316.1|36078_37425_-|transposase	ISNCY family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP021856	Klebsiella pneumoniae strain AR_0125 plasmid tig00000001_pilon, complete sequence	146168	41548	45855	146168		uncultured_Caudovirales_phage(100.0%)	5	NA	NA
WP_004152101.1|41548_41899_+	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	A0A2H4J145	uncultured_Caudovirales_phage	50.9	1.4e-23
WP_004152100.1|41948_42311_+	arsenite efflux transporter metallochaperone ArsD	NA	NA	NA	NA	NA
WP_004152099.1|42328_44080_+	arsenite efflux transporter ATPase subunit ArsA	NA	NA	NA	NA	NA
WP_004152098.1|44127_45417_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4J144	uncultured_Caudovirales_phage	74.0	1.9e-171
WP_004152097.1|45429_45855_+	glutaredoxin-dependent arsenate reductase	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	72.9	2.3e-52
>prophage 3
NZ_CP021856	Klebsiella pneumoniae strain AR_0125 plasmid tig00000001_pilon, complete sequence	146168	49312	50023	146168		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
WP_085903505.1|49312_50023_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	77.0	2.9e-92
>prophage 4
NZ_CP021856	Klebsiella pneumoniae strain AR_0125 plasmid tig00000001_pilon, complete sequence	146168	54541	56619	146168		Bacillus_phage(100.0%)	2	NA	NA
WP_004152084.1|54541_55942_-	copper resistance membrane spanning protein PcoS	NA	W8CYF6	Bacillus_phage	26.3	4.1e-18
WP_001188930.1|55938_56619_-	copper response regulator transcription factor PcoR	NA	W8CYM9	Bacillus_phage	34.4	8.7e-30
>prophage 5
NZ_CP021856	Klebsiella pneumoniae strain AR_0125 plasmid tig00000001_pilon, complete sequence	146168	61712	68969	146168		uncultured_Caudovirales_phage(33.33%)	5	NA	NA
WP_004118669.1|61712_62450_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A2H4JAF5	uncultured_Caudovirales_phage	32.5	1.2e-11
WP_000843497.1|62483_62681_-	DUF2933 domain-containing protein	NA	NA	NA	NA	NA
WP_004098955.1|62721_65169_-	Ag(+)-translocating P-type ATPase SilP	NA	A0A218MNH6	uncultured_virus	35.8	7.6e-84
WP_000758228.1|65295_65736_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004098958.1|65822_68969_-	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	NA	S5VTK5	Leptospira_phage	22.5	4.0e-61
>prophage 6
NZ_CP021856	Klebsiella pneumoniae strain AR_0125 plasmid tig00000001_pilon, complete sequence	146168	72342	145114	146168	transposase,integrase	Stx2-converting_phage(15.0%)	48	86459:86473	129491:129505
WP_001572351.1|72342_73023_+	copper/silver response regulator transcription factor SilR	NA	W8CYM9	Bacillus_phage	35.6	2.1e-31
WP_003032875.1|73015_74491_+	copper/silver sensor histidine kinase SilS	NA	W8CYF6	Bacillus_phage	30.1	1.0e-27
WP_004178091.1|74741_75173_+	silver-binding protein SilE	NA	NA	NA	NA	NA
WP_085955172.1|76601_77808_+|transposase	IS3 family transposase	transposase	Q9ZXG3	Shigella_phage	63.2	1.7e-100
WP_004178088.1|78848_80846_+	BCCT family transporter	NA	A0A2I7QNT1	Vibrio_phage	25.9	9.7e-21
WP_004152070.1|80908_82186_+	DUF2254 domain-containing protein	NA	NA	NA	NA	NA
WP_020444838.1|83168_84623_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_004197688.1|85224_85482_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004152067.1|86154_87078_-|transposase	IS5 family transposase	transposase	Q9MCT5	Escherichia_phage	98.4	2.1e-175
86459:86473	attL	CGCCGCAGTTCATCG	NA	NA	NA	NA
WP_071527918.1|87142_87454_+	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_004152065.1|87480_88428_-	sensor domain-containing diguanylate cyclase	NA	G3MA91	Bacillus_virus	30.6	1.8e-12
WP_000957857.1|89921_90110_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000948429.1|90119_91319_+|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_004152063.1|92716_93727_-	replication initiation protein	NA	J9Q7H0	Salmonella_phage	55.9	8.8e-87
WP_000523813.1|94478_95645_+	plasmid-partitioning protein SopA	NA	A0A2I6B2X3	Macacine_betaherpesvirus	97.7	1.4e-224
WP_004152062.1|95644_96616_+	ParB/RepB/Spo0J family plasmid partition protein	NA	I3WF22	Macacine_betaherpesvirus	86.6	4.1e-150
WP_000948429.1|100622_101822_-|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_000957857.1|101831_102020_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004152291.1|103675_104992_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_004152290.1|104995_107305_-	ATPase	NA	NA	NA	NA	NA
WP_003846917.1|109010_110264_-	lactose permease	NA	NA	NA	NA	NA
WP_004152287.1|110315_113390_-	beta-galactosidase	NA	L0N6M2	Herpes_simplex_virus	96.7	0.0e+00
WP_004152286.1|113511_114594_-	LacI family DNA-binding transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	96.4	6.8e-186
WP_004152284.1|115054_116065_+	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA	NA
WP_071527925.1|116443_116686_+	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_004118251.1|117016_117310_-	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZDM8	Stx2-converting_phage	96.9	2.7e-49
WP_004152282.1|117408_118176_-	Fe(3+) dicitrate ABC transporter ATP-binding protein FecE	NA	G3M9Y6	Bacillus_virus	25.2	9.8e-14
WP_004152281.1|118176_119133_-	Fe(3+) dicitrate ABC transporter permease subunit FecD	NA	NA	NA	NA	NA
WP_004118243.1|119129_120128_-	iron-dicitrate ABC transporter permease FecC	NA	NA	NA	NA	NA
WP_004118241.1|120124_121027_-	Fe(3+) dicitrate ABC transporter substrate-binding protein FecB	NA	NA	NA	NA	NA
WP_004152280.1|121071_123396_-	Fe(3+) dicitrate transport protein FecA	NA	NA	NA	NA	NA
WP_004118237.1|123481_124435_-	fec operon regulator FecR	NA	NA	NA	NA	NA
WP_004118235.1|124431_124953_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_004118231.1|126055_126223_+|integrase	integrase	integrase	NA	NA	NA	NA
WP_004118840.1|126507_127635_+	transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_004118229.1|127631_128225_+	ANTAR domain-containing protein	NA	NA	NA	NA	NA
WP_004152279.1|128221_129070_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_004118227.1|129069_129990_+	ABC transporter permease	NA	NA	NA	NA	NA
129491:129505	attR	CGCCGCAGTTCATCG	NA	NA	NA	NA
WP_004152278.1|130002_131607_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_004118225.1|131651_132599_+	acetamidase/formamidase family protein	NA	A0A1V0S8X7	Catovirus	22.7	9.6e-11
WP_004118832.1|132606_134340_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.6	6.9e-15
WP_004152557.1|138162_138510_-	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZDM8	Stx2-converting_phage	95.7	2.0e-59
WP_020956879.1|138506_138893_-|transposase	transposase	transposase	B6DZU5	Stx2-converting_phage	90.7	1.1e-58
WP_004118217.1|139440_140076_-	His-Xaa-Ser repeat protein HxsA	NA	NA	NA	NA	NA
WP_000005560.1|140072_141185_-	His-Xaa-Ser system radical SAM maturase HxsC	NA	S5WIP3	Leptospira_phage	33.8	1.5e-47
WP_004118216.1|141177_142566_-	His-Xaa-Ser system radical SAM maturase HxsB	NA	S5VT21	Leptospira_phage	29.0	6.3e-51
WP_000333416.1|142565_142838_-	His-Xaa-Ser system protein HxsD	NA	NA	NA	NA	NA
WP_000412211.1|144454_145114_+	type A-1 chloramphenicol O-acetyltransferase	NA	G3CFL0	Escherichia_phage	100.0	8.4e-131
>prophage 1
NZ_CP021857	Klebsiella pneumoniae strain AR_0125 plasmid tig00000002_pilon, complete sequence	106331	21929	73009	106331	integrase,transposase	Escherichia_phage(31.58%)	53	21736:21795	48918:50628
21736:21795	attL	TGTCGAAAGTGGAACAGTACTTGACGTATAGGAAATTGAAAAACCAGTCGATACCATTGT	NA	NA	NA	NA
WP_000948429.1|21929_23129_-|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_000957857.1|23138_23327_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001067855.1|23982_24687_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_002904004.1|24823_25684_+	class A extended-spectrum beta-lactamase SHV-12	NA	A0A077SL40	Escherichia_phage	99.3	2.2e-155
WP_002903955.1|26727_27630_+	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	99.7	2.6e-159
WP_000957857.1|27999_28188_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000948429.1|28197_29397_+|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_022644731.1|30476_31352_+	RepB family plasmid replication initiator protein	NA	Q71TL8	Escherichia_phage	57.1	1.9e-82
WP_004197649.1|31984_32611_+	ParA family plasmid-partitioning AAA ATPase	NA	A0A222YXS3	Escherichia_phage	43.6	2.9e-40
WP_006788217.1|32730_32910_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004197635.1|33357_34152_-|integrase	phage integrase family protein	integrase	I3WFA4	Macacine_betaherpesvirus	88.7	5.5e-52
WP_020315256.1|34349_35366_-	hypothetical protein	NA	NA	NA	NA	NA
WP_022644730.1|35362_35686_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025380813.1|35712_36072_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001568026.1|36276_36582_-	type II toxin-antitoxin system toxin CcdB	NA	NA	NA	NA	NA
WP_001568025.1|36583_36802_-	type II toxin-antitoxin system antitoxin CcdA	NA	NA	NA	NA	NA
WP_004193995.1|37354_38044_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020315560.1|38075_38765_-	RES family NAD+ phosphorylase	NA	NA	NA	NA	NA
WP_020804424.1|39201_39471_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020317495.1|39458_40034_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020802777.1|40064_40559_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004197807.1|40602_40971_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004197808.1|41004_41208_+	hemolysin expression modulator Hha	NA	NA	NA	NA	NA
WP_050893391.1|41284_41464_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000427623.1|41957_42962_-|transposase	IS110-like element IS4321 family transposase	transposase	NA	NA	NA	NA
WP_015065644.1|43040_46007_-|transposase	Tn3-like element ISPa38 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	73.2	0.0e+00
WP_001247892.1|46081_46372_+	nucleotidyltransferase	NA	NA	NA	NA	NA
WP_001293886.1|46368_46770_+	DUF86 domain-containing protein	NA	NA	NA	NA	NA
WP_000215515.1|46759_47116_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_000957857.1|47385_47574_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000948429.1|47583_48783_+|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_001067855.1|50337_51042_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
48918:50628	attR	ACAATGGTATCGACTGGTTTTTCAATTTCCTATACGTCAAGTACTGTTCCACTTTCGACAGCACCGCGCAGGGCAACATTGGCCCGGTGCTGGATGCCCTGCTGGCCGAGCTGGGTGAGACGCGGACGGTGATTTCCCCGGCGCTGCCGGTTAACGGCCGCACGGTCTATCAGGGATATCTGTTCGTCGGCGAGCAACTGCTGAATGAGTCCGGGATGCGCCACCATCCGGTGACGCCGATGGAGGATGCGCACCTGGGCCGCTTAATTGAGCGCCAAGGGCGCGGAAAAGCCGCGCTGATTGCCTGGCCGATTGTCGCCCGGTCGCCGCCGCGCTGGCGGCAGTCAACGATCCGGCGGTGCGCTATGTGGTGCTCGACGCCCTCAGCGAACAGGATCTGCTCACCCAGGGCGTGGCGCTGCGGGAGATGAAGCTGGTCTCCGGCGGTTCCGGCCTCGCCATCGGCCTCGCCCGCGACTGGGCGCAGCGCCATGGCGCCAGGGGGGAAAGCGCTCAGGCCGGCATGCCGCTGGCCGGTCCGGCGGTGGTGCTCTCGGGCTCCTGCTCGGTGATGACCAACAGCCAGGTGGCGGCCTATCGTCAACAGGCCCCCGCCCGCGCCGTCGACTTAAGCGCCTGCTTTACCGATCTGGAGAGCTACGTCAGGACGCTGACTGACTGGGTGGACGCGCAGCGCGATGCGCCGCTGGCGCCGATGATCTATGCCACCACCGAGCCGCAAACGCTGCAGCGGATCCAGGCGCAGTATGGCGACAAGGCCAGCAGCGAACGGGTGGAACAGCTGTTTGCCGCTCTTGCCGCCGCCCTGAAGGCGAACGGATTTACCCGCTTTATTGTGGCCGGAGGGGAAACGTCGAGCATTGTGGCGCAGACCCTGGGGGTTGAGGCGTTCCATATTGGGCCGACCATCTCCCCTGGCGTGCCCTGGGTGCGTGACACCCGCCAGCCGCTCTCCCTGGCGCTGAAGTCAGGTAACTTCGGCGATATCCAGTTCTTTGCCCGTGCCCAGCAGGAGTTTCGTCATGACTGAGCAACAACTGCGAGAGGAAATGGTGCAGATTGGCGCCTCGTTGTTTAGCCGCGGCTATGCCACCGGCTCCGCTGGCAATCTGTCGCTGCTGCTGCCGGACGGCAACCTGCTGGCGACGCCGACCGGCGCCTGCCTCGGCGAACTGCAGGCTCAGCGGTTGTCGGTGGTGACGCTGCAAGGGGAATGGATCTCCGGCGACAAACCGTCGAAAGAGGTCACTTTTCACCGGGCGGTCTATTTGCACAACCCGGCCTGCAAGGCGATCGTCCACTTGCACAGCCACTATCTGACCGCGCTCTCCTGCCTGCAGGGGCTCGGGCACTGTTGCAAAGTTAGCGATGAGGCAGCCTTTTGTCTTATTCAAAGGCCTTACATTTCAAAAACTCTGCTTACCAGGCGCATTTCGCCCAGGGGATCACCATAATAAAATGCTGAGGCCTGGCCTTTGCGTAGTGCACGCATCACCTCAATACCTTTGATGGTGGCGTAAGCCGTCTTCATGGATTTAAATCCCAGCGTGGCGCCGATTATCCGTTTCAGTTTGCCATGATCGCATTCAATCACGTTGTTCCGGTACTTAATCTGTCGGTGTTCAACGTCAGACGGGCACCGGCCTTCGCGTTTGAGCAGAGCAAGCGCGCGACCATAGGCGGGCGCTTT	NA	NA	NA	NA
WP_001235713.1|51737_52295_-	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	100.0	7.0e-94
WP_022644723.1|52456_55462_+|transposase	Tn3-like element Tn3 family transposase	transposase	Q1MVP5	Enterobacteria_phage	99.6	0.0e+00
WP_001141270.1|56474_56750_+	formaldehyde-responsive transcriptional repressor FrmR	NA	NA	NA	NA	NA
WP_000842086.1|56780_57890_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	28.1	3.7e-30
WP_000235177.1|57931_58330_+	VOC family protein	NA	NA	NA	NA	NA
WP_009652884.1|58395_59232_+	S-formylglutathione hydrolase	NA	NA	NA	NA	NA
WP_000470624.1|59259_59895_-	serine recombinase	NA	NA	NA	NA	NA
WP_022644720.1|60062_63101_+|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	53.6	2.5e-294
WP_001567660.1|63124_64147_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_020314648.1|64606_64885_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020314646.1|65202_65814_+	DUF2913 family protein	NA	NA	NA	NA	NA
WP_020314639.1|65810_66764_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	Q2A0A7	Sodalis_phage	57.1	9.5e-75
WP_022644719.1|66884_67151_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020314642.1|67170_67791_-	resolvase	NA	A0A219Y912	Aeromonas_phage	31.0	1.0e-08
WP_022644718.1|68388_69015_+	ParA family protein	NA	A0A2H4EW66	Aeromonas_phage	34.4	4.5e-25
WP_020314634.1|69059_69287_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020314652.1|69461_70736_-	Y-family DNA polymerase	NA	F1C5A5	Cronobacter_phage	60.7	1.3e-148
WP_046960466.1|70747_71197_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	52.0	2.3e-31
WP_020314635.1|71193_71439_-	DinI-like family protein	NA	Q7Y3V9	Yersinia_phage	39.3	1.1e-08
WP_020314631.1|71642_71873_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020314651.1|72307_73009_+	DNA methylase	NA	A0A2K9VH43	Faecalibacterium_phage	34.7	6.2e-23
>prophage 1
NZ_CP021858	Klebsiella pneumoniae strain AR_0125 plasmid tig00000005_pilon, complete sequence	47277	0	16054	47277	integrase,transposase	Escherichia_phage(37.5%)	11	3023:3082	29071:29198
WP_001039464.1|2552_2939_+	hypothetical protein	NA	NA	NA	NA	NA
3023:3082	attL	GGCTTTGTTGAATAAATCAGATTTCGGGTAAGTCTCCCCCGTAGCGGGTTGTGTTTTCAG	NA	NA	NA	NA
WP_001118624.1|3078_4002_-|transposase	IS5 family transposase	transposase	Q1MVF0	Enterobacteria_phage	96.4	1.8e-171
WP_004152765.1|6616_8101_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
WP_000776034.1|8509_8941_+	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	53.3	1.6e-29
WP_001754953.1|8940_10212_+	Y-family DNA polymerase	NA	F1C5A5	Cronobacter_phage	63.7	5.4e-150
WP_006797589.1|10293_11271_-	ParB/RepB/Spo0J family partition protein	NA	Q38420	Escherichia_phage	54.1	5.0e-87
WP_000368714.1|11267_12473_-	ParA family protein	NA	A0A077SL49	Escherichia_phage	69.6	2.4e-163
WP_000339857.1|12887_13157_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004118283.1|13333_14200_-	replication initiation protein	NA	A0A222YYK1	Escherichia_phage	31.1	1.5e-23
WP_000764642.1|14962_15220_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000015958.1|15277_16054_-|integrase	phage integrase family protein	integrase	I3WFA4	Macacine_betaherpesvirus	92.9	6.4e-53
29071:29198	attR	GGCTTTGTTGAATAAATCAGATTTCGGGTAAGTCTCCCCCGTAGCGGGTTGTGTTTTCAGGCAATACGCACGCTTTCAGGCATACCTGCTTTCGTCATTTTGTTCAGCGCTCGTACCAGGGCCATAGC	NA	NA	NA	NA
>prophage 2
NZ_CP021858	Klebsiella pneumoniae strain AR_0125 plasmid tig00000005_pilon, complete sequence	47277	20148	25273	47277	transposase	Enterobacteria_phage(66.67%)	3	NA	NA
WP_022644723.1|20148_23154_-|transposase	Tn3-like element Tn3 family transposase	transposase	Q1MVP5	Enterobacteria_phage	99.6	0.0e+00
WP_001235713.1|23315_23873_+	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	100.0	7.0e-94
WP_001067855.1|24568_25273_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
>prophage 3
NZ_CP021858	Klebsiella pneumoniae strain AR_0125 plasmid tig00000005_pilon, complete sequence	47277	28313	46012	47277	integrase,transposase	Salmonella_phage(33.33%)	18	20643:20657	46280:46294
20643:20657	attL	GTACTTTGCCCAGCT	NA	NA	NA	NA
WP_073553194.1|28313_28541_-	hypothetical protein	NA	A0A1B0V7H9	Salmonella_phage	71.1	1.9e-05
WP_000602738.1|30174_30927_+|transposase	IS6 family transposase	transposase	A0A077SL39	Escherichia_phage	44.7	2.4e-41
WP_000742814.1|31348_32374_-	aminoglycoside O-phosphotransferase APH(4)-Ia	NA	NA	NA	NA	NA
WP_001199192.1|32602_33379_-	aminoglycoside N-acetyltransferase AAC(3)-IV	NA	NA	NA	NA	NA
WP_001067858.1|33492_34197_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	99.6	1.2e-138
WP_011264039.1|34269_34509_+	macrolide transporter	NA	A0A2K5B2B5	Erysipelothrix_phage	46.2	9.5e-08
WP_000612791.1|34654_35518_+	SDR family oxidoreductase	NA	W8CYX9	Bacillus_phage	31.0	2.5e-05
WP_001354008.1|35555_35801_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000034420.1|36269_37061_+	sulfonamide-resistant dihydropteroate synthase Sul3	NA	A0A0B5J4J5	Pandoravirus	26.5	1.2e-14
WP_000800531.1|38240_38573_-	quaternary ammonium compound efflux SMR transporter QacL	NA	NA	NA	NA	NA
WP_001206316.1|38742_39534_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA	NA
WP_000095725.1|39626_40886_-	chloramphenicol efflux MFS transporter CmlA1	NA	S4TR35	Salmonella_phage	31.7	4.8e-26
WP_001261740.1|41147_41939_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA	NA
WP_000050382.1|41996_42605_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
WP_001456218.1|42700_43543_-	alpha/beta fold putative hydrolase EstX	NA	NA	NA	NA	NA
WP_000845048.1|43709_44723_+|integrase	class 1 integron integrase IntI1	integrase	A0A1P8DJJ6	Virus_Rctr41k	45.5	1.0e-71
WP_000454193.1|44925_45276_+	DUF3330 domain-containing protein	NA	NA	NA	NA	NA
WP_001161490.1|45451_46012_+	recombinase family protein	NA	A0A1B0V7I5	Salmonella_phage	100.0	1.1e-59
46280:46294	attR	AGCTGGGCAAAGTAC	NA	NA	NA	NA
>prophage 1
NZ_CP021861	Klebsiella pneumoniae strain AR_0125 plasmid tig00000009_pilon, complete sequence	79489	16771	64683	79489	integrase,transposase	Escherichia_phage(22.22%)	53	49174:49212	67145:67183
WP_000486719.1|16771_17896_+|integrase	site-specific integrase	integrase	B5WZU7	Pseudomonas_phage	40.1	3.0e-43
WP_020314983.1|18135_18561_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000698399.1|18607_19126_+	thermonuclease family protein	NA	A0A0R6PHV6	Moraxella_phage	38.1	2.6e-18
WP_001218543.1|19141_19546_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020314989.1|19909_20497_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020314981.1|20508_22674_+	type IA DNA topoisomerase	NA	A0A1X9I6W8	Streptococcus_phage	26.0	1.9e-30
WP_000850854.1|22742_22949_+	hemolysin expression modulator Hha	NA	NA	NA	NA	NA
WP_001356704.1|23283_23526_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032409841.1|23770_24211_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020314987.1|24253_28495_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000730722.1|28491_28833_-	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA	NA
WP_000717860.1|29203_29605_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000797966.1|29622_30375_+	conjugal transfer protein TraL	NA	NA	NA	NA	NA
WP_020806530.1|30352_31084_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001708405.1|31103_31523_+	hypothetical protein	NA	A5LH60	Enterobacteria_phage	47.1	6.1e-18
WP_020314988.1|31524_31788_+	hypothetical protein	NA	A0A2P0P958	Salmonella_phage	71.3	3.3e-30
WP_001229189.1|31824_32340_+	hypothetical protein	NA	G9L6B3	Escherichia_phage	97.7	2.3e-99
WP_001310435.1|32336_32657_+	hypothetical protein	NA	A0A0N7KZV3	Escherichia_phage	90.3	2.3e-25
WP_000466318.1|32787_33225_-	hypothetical protein	NA	A0A0R6PJ17	Moraxella_phage	34.7	9.5e-14
WP_000833470.1|33249_33432_-	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA	NA
WP_001401700.1|33976_34159_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020314977.1|34545_34806_-	hypothetical protein	NA	NA	NA	NA	NA
WP_022540736.1|35340_35580_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_020314676.1|35569_35830_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000814381.1|35881_36106_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020314678.1|36202_36412_-	hypothetical protein	NA	NA	NA	NA	NA
WP_020314677.1|36453_36777_-	hypothetical protein	NA	A0A0F6WCW0	Sinorhizobium_phage	46.5	3.5e-13
WP_000151456.1|37357_37600_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001230709.1|37596_37851_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001083904.1|37847_38390_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000957857.1|38936_39125_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000948429.1|39134_40334_+|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_088207303.1|40448_40697_-	DnaJ domain-containing protein	NA	F2Y2Y5	Organic_Lake_phycodnavirus	46.3	2.1e-05
WP_001542022.1|41100_41430_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000532148.1|42016_42682_+	P-loop NTPase	NA	A0A0A8IL09	Aurantimonas_phage	31.3	5.0e-06
WP_000186151.1|42869_43040_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001310439.1|43057_43630_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001434039.1|43803_43965_-	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA	NA
WP_020314815.1|45373_46402_-	RepA protein, IncFII family	NA	NA	NA	NA	NA
WP_001358485.1|47479_47986_+	CaiF/GrlA family transcriptional regulator	NA	NA	NA	NA	NA
WP_000049865.1|47978_48173_+	DUF1187 family protein	NA	NA	NA	NA	NA
WP_072105959.1|48218_49172_+	SPFH/Band 7/PHB domain protein	NA	A0A2K9L3L2	Tupanvirus	30.1	1.6e-21
49174:49212	attL	AGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAG	NA	NA	NA	NA
WP_000027057.1|49321_50182_-	class A broad-spectrum beta-lactamase TEM-1	NA	Q1MVP3	Enterobacteria_phage	100.0	4.6e-161
WP_000722315.1|50881_51706_-	oxacillin-hydrolyzing class D beta-lactamase OXA-9	NA	NA	NA	NA	NA
WP_001206315.1|51765_52554_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA	NA
WP_014454105.1|52623_53178_-	aminoglycoside N-acetyltransferase AAC(6')-Ib'	NA	NA	NA	NA	NA
WP_001217881.1|53411_53969_-	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	98.4	2.0e-93
WP_004152391.1|55083_56799_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_004152392.1|56908_59938_+|transposase	IS3-like element Tn4401 family transposase	transposase	NA	NA	NA	NA
WP_004199214.1|60044_61070_+|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	50.3	1.4e-87
WP_004152394.1|61066_61846_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	61.8	2.5e-89
WP_004152396.1|62232_63114_+	carbapenem-hydrolyzing class A beta-lactamase KPC-3	NA	A0A1B0VBP7	Salmonella_phage	52.2	2.8e-73
WP_004152397.1|63363_64683_-|transposase	IS1182-like element ISKpn6 family transposase	transposase	Q9MBP7	Staphylococcus_prophage	24.2	1.9e-12
67145:67183	attR	CTTAACGTGAGTTTTCGTTCCACTGAGCGTCAGACCCCT	NA	NA	NA	NA
