assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002197325.1_ASM219732v1	NZ_CP021868	Streptococcus agalactiae strain SG-M8 chromosome, complete genome	1	976520-977347	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas9,cas1,cas2,csn2	RT,cas3,DinG,csa3,cas9,cas1,cas2,csn2,csm6,DEDDh	Type II-B,Type II-C,Type II-A	GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC,GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC,GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	36,36,36	2	2	976556-976585|976754-976783	NZ_CP021868.1_1678450-1678421|NZ_CP021868.1_291785-291756	II-A:II-A:II-A	11,11,12	12	TypeII-B,TypeII-C,TypeII-A	RT,cas3,DinG,csa3,cas9,cas1,cas2,csn2,csm6,DEDDh	NA,NA|261aa|down_8|NZ_CP021868.1_990899_991682_-	NA|124aa|up_9|NZ_CP021868.1_965902_966274_+	pfam08349, DUF1722, Protein of unknown function (DUF1722)	NA|127aa|up_8|NZ_CP021868.1_966298_966679_+	TIGR02328, TIGR02328, conserved hypothetical protein	NA|377aa|up_7|NZ_CP021868.1_966770_967901_+	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|246aa|up_6|NZ_CP021868.1_967904_968642_+	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase	NA|257aa|up_5|NZ_CP021868.1_968642_969413_+	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|219aa|up_4|NZ_CP021868.1_969402_970059_+	COG4478, COG4478, Predicted membrane protein [Function unknown]	cas9|1371aa|up_3|NZ_CP021868.1_970445_974558_+	TIGR01865, conserved_hypothetical_protein, CRISPR subtype II/NMENI RNA-guided endonuclease Cas9/Csn1	cas1|290aa|up_2|NZ_CP021868.1_974559_975429_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|114aa|up_1|NZ_CP021868.1_975425_975767_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|222aa|up_0|NZ_CP021868.1_975753_976419_+	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	NA|139aa|down_0|NZ_CP021868.1_977904_978321_+	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated	NA|611aa|down_1|NZ_CP021868.1_978456_980289_+	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|220aa|down_2|NZ_CP021868.1_983168_983828_+	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only]	NA|145aa|down_3|NZ_CP021868.1_984300_984735_+	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|931aa|down_4|NZ_CP021868.1_984886_987679_+	COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism]	NA|368aa|down_5|NZ_CP021868.1_987678_988782_+	pfam11187, DUF2974, Protein of unknown function (DUF2974)	NA|213aa|down_6|NZ_CP021868.1_988902_989541_-	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others	NA|204aa|down_7|NZ_CP021868.1_990251_990863_+	COG0398, COG0398, Uncharacterized conserved protein [Function unknown]	NA|261aa|down_8|NZ_CP021868.1_990899_991682_-	NA	NA|233aa|down_9|NZ_CP021868.1_991693_992392_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]
GCF_002197325.1_ASM219732v1	NZ_CP021868	Streptococcus agalactiae strain SG-M8 chromosome, complete genome	2	1462590-1463202	2	CRT	no	RT	RT,cas3,DinG,csa3,cas9,cas1,cas2,csn2,csm6,DEDDh	Unclear	TNGANGCACTCNTTGANGCGCTNGTNCTNGCTGANGT	37	0	0	NA	NA	NA	8	8	Orphan	RT,cas3,DinG,csa3,cas9,cas1,cas2,csn2,csm6,DEDDh	NA,NA|117aa|down_6|NZ_CP021868.1_1475223_1475574_+,NA|53aa|down_7|NZ_CP021868.1_1475665_1475824_-	NA|331aa|up_9|NZ_CP021868.1_1449854_1450847_-	TIGR03711, acc_sec_asp3, accessory Sec system protein Asp3	NA|520aa|up_8|NZ_CP021868.1_1450843_1452403_-	TIGR03712, acc_sec_asp2, accessory Sec system protein Asp2	NA|515aa|up_7|NZ_CP021868.1_1452409_1453954_-	pfam16993, Asp1, Accessory Sec system protein Asp1	NA|410aa|up_6|NZ_CP021868.1_1453953_1455183_-	PRK12417, secY, preprotein translocase subunit SecY; Reviewed	NA|399aa|up_5|NZ_CP021868.1_1455306_1456503_-	TIGR03728, glyco_access_1, glycosyltransferase, SP_1767 family	NA|292aa|up_4|NZ_CP021868.1_1456563_1457439_-	pfam00535, Glycos_transf_2, Glycosyl transferase family 2	NA|395aa|up_3|NZ_CP021868.1_1457431_1458616_-	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	NA|414aa|up_2|NZ_CP021868.1_1458605_1459847_-	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	NA|402aa|up_1|NZ_CP021868.1_1459843_1461049_-	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	NA|336aa|up_0|NZ_CP021868.1_1461057_1462065_-	PRK09814, PRK09814, sugar transferase	NA|269aa|down_0|NZ_CP021868.1_1466228_1467034_+	pfam13359, DDE_Tnp_4, DDE superfamily endonuclease	NA|499aa|down_1|NZ_CP021868.1_1467403_1468900_+	pfam08270, PRD_Mga, M protein trans-acting positive regulator (MGA) PRD domain	NA|664aa|down_2|NZ_CP021868.1_1468996_1470988_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|307aa|down_3|NZ_CP021868.1_1471048_1471969_-	pfam02517, Abi, CAAX protease self-immunity	NA|728aa|down_4|NZ_CP021868.1_1472151_1474335_+	cd13619, PBP2_GlnP, Glutamine-binding domain of ABC transporter, a member of the type 2 periplasmic binding fold protein superfamily	NA|247aa|down_5|NZ_CP021868.1_1474334_1475075_+	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|117aa|down_6|NZ_CP021868.1_1475223_1475574_+	NA	NA|53aa|down_7|NZ_CP021868.1_1475665_1475824_-	NA	NA|438aa|down_8|NZ_CP021868.1_1475849_1477163_-	PRK12297, obgE, GTPase CgtA; Reviewed	NA|43aa|down_9|NZ_CP021868.1_1477223_1477352_-	pfam13253, DUF4044, Protein of unknown function (DUF4044)
GCF_002197325.1_ASM219732v1	NZ_CP021868	Streptococcus agalactiae strain SG-M8 chromosome, complete genome	3	2017676-2018089	3	CRT	no		RT,cas3,DinG,csa3,cas9,cas1,cas2,csn2,csm6,DEDDh	Orphan	TTTAGCTTCTGGNTTNGC	18	1	1	2017694-2017723	NZ_CP021868.1_2018078-2018107	NA	7	7	Orphan	RT,cas3,DinG,csa3,cas9,cas1,cas2,csn2,csm6,DEDDh	NA|203aa|up_4|NZ_CP021868.1_2010891_2011500_+,NA	NA|108aa|up_9|NZ_CP021868.1_2002454_2002778_-	COG4392, COG4392, Predicted membrane protein [Function unknown]	NA|231aa|up_8|NZ_CP021868.1_2002767_2003460_-	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism]	NA|1571aa|up_7|NZ_CP021868.1_2003782_2008495_+	cd07475, Peptidases_S8_C5a_Peptidase, Peptidase S8 family domain in Streptococcal C5a peptidases	NA|229aa|up_6|NZ_CP021868.1_2008727_2009414_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|463aa|up_5|NZ_CP021868.1_2009410_2010799_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|203aa|up_4|NZ_CP021868.1_2010891_2011500_+	NA	NA|834aa|up_3|NZ_CP021868.1_2011589_2014091_-	PRK00390, leuS, leucyl-tRNA synthetase; Validated	NA|416aa|up_2|NZ_CP021868.1_2014467_2015715_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|282aa|up_1|NZ_CP021868.1_2015757_2016603_-	cd07208, Pat_hypo_Ecoli_yjju_like, Hypothetical patatin similar to yjju protein of Escherichia coli	NA|180aa|up_0|NZ_CP021868.1_2016740_2017280_-	PRK05609, nusG, transcription antitermination protein NusG; Validated	NA|58aa|down_0|NZ_CP021868.1_2019463_2019637_-	COG0690, SecE, Preprotein translocase subunit SecE [Intracellular trafficking and secretion]	NA|51aa|down_1|NZ_CP021868.1_2019672_2019825_-	PRK00504, rpmG, 50S ribosomal protein L33; Validated	NA|774aa|down_2|NZ_CP021868.1_2019873_2022195_-	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane]	NA|295aa|down_3|NZ_CP021868.1_2022238_2023123_+	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|547aa|down_4|NZ_CP021868.1_2023147_2024788_-	COG4640, COG4640, Predicted membrane protein [Function unknown]	NA|404aa|down_5|NZ_CP021868.1_2024957_2026169_-	PRK05362, PRK05362, phosphopentomutase; Provisional	NA|224aa|down_6|NZ_CP021868.1_2026235_2026907_-	PRK00507, PRK00507, deoxyribose-phosphate aldolase; Provisional	NA|401aa|down_7|NZ_CP021868.1_2026936_2028139_-	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism]	NA|260aa|down_8|NZ_CP021868.1_2028159_2028939_-	cd17767, UP_EcUdp-like, uridine phosphorylases similar to Escherichia coli Udp and related phosphorylases	NA|246aa|down_9|NZ_CP021868.1_2029096_2029834_+	COG2188, PhnF, Transcriptional regulators [Transcription]
