The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP021790	Limosilactobacillus fermentum strain LAC FRN-92 chromosome, complete genome	2063606	83791	92263	2063606		Streptococcus_phage(33.33%)	10	NA	NA
WP_004563321.1|83791_84832_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	31.9	2.1e-27
WP_004563322.1|84849_85170_-	cyclic-di-AMP receptor	NA	NA	NA	NA	NA
WP_004562764.1|85182_85827_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	53.1	1.6e-54
WP_004562763.1|85846_86095_-	YaaL family protein	NA	NA	NA	NA	NA
WP_004562762.1|86096_86696_-	recombination protein RecR	NA	NA	NA	NA	NA
WP_004562761.1|86711_87020_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_004563323.1|87042_88734_-	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.6	2.3e-55
WP_004562759.1|88989_89514_-	nucleoside deaminase	NA	A0A2H4PQS8	Staphylococcus_phage	34.4	1.0e-06
WP_004563324.1|89770_89992_+	glutaredoxin-like protein NrdH	NA	X2KRY7	Enterococcus_phage	54.7	3.2e-10
WP_021815675.1|90091_92263_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	59.4	3.9e-249
>prophage 2
NZ_CP021790	Limosilactobacillus fermentum strain LAC FRN-92 chromosome, complete genome	2063606	953861	962574	2063606	transposase	Staphylococcus_phage(57.14%)	10	NA	NA
WP_012390701.1|953861_954314_+|transposase	IS200/IS605 family transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	51.5	2.8e-32
WP_087908109.1|954603_955776_-	cysteine desulfurase	NA	NA	NA	NA	NA
WP_054173519.1|956108_956687_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_087908110.1|956718_957282_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	43.8	2.9e-31
WP_087908111.1|957274_958309_+	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	32.2	2.7e-43
WP_021349414.1|958369_958855_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_083276508.1|959264_960323_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	33.9	3.4e-41
WP_087908112.1|960322_960931_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	39.1	4.7e-27
WP_087908113.1|960917_962111_+	GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	48.1	1.4e-96
WP_021349417.1|962103_962574_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	42.9	6.8e-26
>prophage 3
NZ_CP021790	Limosilactobacillus fermentum strain LAC FRN-92 chromosome, complete genome	2063606	1610518	1618787	2063606	tRNA	Staphylococcus_phage(28.57%)	8	NA	NA
WP_046947983.1|1610518_1611721_+|tRNA	CCA tRNA nucleotidyltransferase	tRNA	H7BUW3	unidentified_phage	48.6	5.8e-45
WP_003683172.1|1611733_1613620_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	29.0	2.2e-51
WP_023466146.1|1613685_1614645_+	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	63.1	3.5e-117
WP_003683166.1|1614656_1615160_+	dihydrofolate reductase	NA	A0A1Y0SUI9	Pseudomonas_phage	36.0	5.4e-21
WP_003684928.1|1615139_1615769_-	hemolysin III family protein	NA	NA	NA	NA	NA
WP_087908296.1|1615935_1616778_+	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	32.6	7.5e-15
WP_003683161.1|1616912_1618091_-	3-phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	36.8	8.7e-62
WP_003683159.1|1618160_1618787_+	chloramphenicol acetyltransferase	NA	A0A2R8FE91	Brazilian_cedratvirus	40.8	4.0e-13
>prophage 4
NZ_CP021790	Limosilactobacillus fermentum strain LAC FRN-92 chromosome, complete genome	2063606	1888373	2047932	2063606	tRNA,transposase,integrase	Lactobacillus_phage(28.07%)	98	1945663:1945722	2050990:2051894
WP_087908361.1|1888373_1889399_+|transposase	IS30 family transposase	transposase	H7BUM7	unidentified_phage	35.1	1.0e-42
WP_087908362.1|1889577_1890249_+	type II-A CRISPR-associated protein Csn2	NA	NA	NA	NA	NA
WP_111522973.1|1893469_1893565_-	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
WP_075667290.1|1893678_1894185_-	cupin domain-containing protein	NA	A0A291ATU0	Pandoravirus	33.6	9.7e-10
WP_031265095.1|1894381_1895071_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	36.6	1.4e-35
WP_087908363.1|1895268_1896411_+	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	30.0	1.1e-29
WP_087908364.1|1896410_1897706_+	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA	NA
WP_031274479.1|1898922_1899330_+	AzlD domain-containing protein	NA	NA	NA	NA	NA
WP_012390701.1|1899441_1899894_-|transposase	IS200/IS605 family transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	51.5	2.8e-32
WP_075667442.1|1900925_1901966_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_187338158.1|1901968_1904236_-	DUF4982 domain-containing protein	NA	NA	NA	NA	NA
WP_087908366.1|1904389_1905649_-	MFS transporter	NA	NA	NA	NA	NA
WP_087908367.1|1905641_1907195_-	glycoside hydrolase family 43 protein	NA	NA	NA	NA	NA
WP_087908368.1|1907251_1908430_-	MFS transporter	NA	NA	NA	NA	NA
WP_087908369.1|1909285_1910266_-	APC family permease	NA	NA	NA	NA	NA
WP_002342292.1|1910439_1910937_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_087908370.1|1912878_1913811_-|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	38.1	1.4e-41
WP_003682943.1|1913991_1914264_-	hypothetical protein	NA	NA	NA	NA	NA
WP_087908371.1|1914404_1915517_-	hypothetical protein	NA	NA	NA	NA	NA
WP_087908372.1|1917260_1918592_-	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2I2L5E1	Orpheovirus	27.8	4.5e-06
WP_003681362.1|1918745_1919060_-	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	34.0	1.4e-14
WP_087908373.1|1921060_1921807_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015639633.1|1922122_1923928_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	33.8	6.4e-88
WP_015639634.1|1924072_1924687_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003682267.1|1924692_1925571_+	DNA/RNA non-specific endonuclease	NA	NA	NA	NA	NA
WP_012391066.1|1927436_1927688_-|transposase	IS3 family transposase	transposase	Q6J1X3	Lactobacillus_phage	95.2	4.6e-37
WP_021349446.1|1927983_1928544_+	alkaline shock response membrane anchor protein AmaP	NA	NA	NA	NA	NA
WP_087908376.1|1928555_1928741_+	DUF2273 domain-containing protein	NA	NA	NA	NA	NA
WP_003681703.1|1928768_1929311_+	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA	NA
WP_003681701.1|1929325_1929577_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_003681696.1|1929588_1929729_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003682515.1|1931344_1931821_+	nucleoside 2-deoxyribosyltransferase	NA	A0A2P0ZL88	Lactobacillus_phage	35.2	7.7e-17
WP_087908377.1|1931865_1932144_-	permease	NA	NA	NA	NA	NA
WP_123799758.1|1935002_1935953_+	bacteriophage abortive infection AbiH family protein	NA	NA	NA	NA	NA
WP_003683522.1|1937546_1937975_-	hypothetical protein	NA	NA	NA	NA	NA
WP_087908381.1|1937984_1938950_-	hypothetical protein	NA	NA	NA	NA	NA
WP_187338159.1|1939291_1939957_-|transposase	IS30 family transposase	transposase	A0A0P0ICY9	Lactobacillus_phage	49.3	2.0e-34
WP_012391108.1|1940328_1941207_-|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	36.1	1.7e-41
WP_041807745.1|1941230_1941518_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_087908440.1|1943335_1944283_-	DUF4041 domain-containing protein	NA	M1NRY5	Streptococcus_phage	52.3	1.2e-45
WP_087908382.1|1944768_1945158_-	ImmA/IrrE family metallo-endopeptidase	NA	J7KBR5	Streptococcus_phage	31.5	8.5e-06
WP_087908383.1|1945167_1945488_-	helix-turn-helix transcriptional regulator	NA	A0A1S5SDR1	Streptococcus_phage	43.5	3.2e-19
1945663:1945722	attL	TCAATATTGCGCGGATTATTTCTAAGAAATAATTCTGGAAGGAGGCAATTATGAGCATCT	NA	NA	NA	NA
WP_004563123.1|1947151_1947730_+	nitrate reductase molybdenum cofactor assembly chaperone	NA	NA	NA	NA	NA
WP_041812814.1|1947722_1948412_+	respiratory nitrate reductase subunit gamma	NA	NA	NA	NA	NA
WP_087908384.1|1948462_1948918_-|transposase	IS200/IS605 family transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	50.0	2.8e-32
WP_157667082.1|1949702_1949858_+	hypothetical protein	NA	NA	NA	NA	NA
WP_087908385.1|1951182_1952088_-	type II CRISPR-associated endonuclease Cas1	NA	NA	NA	NA	NA
WP_087908188.1|1953303_1953756_-|transposase	IS200/IS605 family transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	51.5	2.8e-32
WP_087908386.1|1953834_1955085_+|transposase	transposase	transposase	A0A286QQE5	Streptococcus_phage	37.0	2.6e-56
WP_087908388.1|1955819_1957040_+|transposase	IS256 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	46.2	6.2e-95
WP_087908389.1|1957753_1959004_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A286QQE5	Streptococcus_phage	37.3	1.4e-57
WP_187338160.1|1959339_1959561_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012391429.1|1960588_1961809_+|transposase	IS256 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	46.5	2.1e-95
WP_054173697.1|1962413_1962869_-|transposase	IS200/IS605 family transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	50.0	8.1e-32
WP_087908391.1|1962942_1964193_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A286QQE5	Streptococcus_phage	37.3	1.4e-57
WP_087908392.1|1970606_1971965_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_187338175.1|1972334_1973321_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	36.9	2.8e-45
WP_014562705.1|1975410_1976598_+|transposase	IS256 family transposase	transposase	NA	NA	NA	NA
WP_014562705.1|1977058_1978246_+|transposase	IS256 family transposase	transposase	NA	NA	NA	NA
WP_157667083.1|1978477_1978756_-|transposase	transposase	transposase	S5VTP8	Leptospira_phage	38.5	5.5e-07
WP_014562466.1|1980292_1981291_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	38.4	1.7e-50
WP_042513910.1|1981769_1982990_-|transposase	IS256 family transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	46.5	2.8e-95
WP_087908396.1|1983236_1984412_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A0P0ICY9	Lactobacillus_phage	54.7	2.2e-113
WP_014081459.1|1984411_1984810_-|transposase	IS200/IS605 family transposase	transposase	A0A286QN76	Streptococcus_phage	62.9	1.1e-45
WP_187338176.1|1985772_1986579_+|transposase	IS3 family transposase	transposase	Q716C2	Shigella_phage	30.1	7.4e-12
WP_087908441.1|1986930_1987629_+	helix-turn-helix domain-containing protein	NA	A0A0C5AJ29	Paenibacillus_phage	30.8	9.9e-21
WP_087908397.1|1989232_1990483_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A286QQE5	Streptococcus_phage	36.8	1.2e-56
WP_087908398.1|1990556_1991012_+|transposase	IS200/IS605 family transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	50.0	3.6e-32
WP_157667084.1|1991106_1991265_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003684331.1|1991512_1992676_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	Q5ULQ4	Lactobacillus_virus	71.7	1.8e-160
WP_157667085.1|1993643_1994186_-|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	A0A1B1P773	Bacillus_phage	28.7	4.1e-06
WP_087908399.1|1994699_1996052_-	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_087908400.1|1996299_1997475_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A0P0ICY9	Lactobacillus_phage	54.9	3.4e-114
WP_087908401.1|1997839_1999027_-|transposase	IS256 family transposase	transposase	NA	NA	NA	NA
WP_164703485.1|1999190_1999340_+	hypothetical protein	NA	NA	NA	NA	NA
WP_087908402.1|1999734_2000985_-|transposase	transposase	transposase	A0A286QQE5	Streptococcus_phage	37.0	2.6e-56
WP_003684311.1|2001063_2001516_+|transposase	IS200/IS605 family transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	51.5	4.7e-32
WP_070955328.1|2002106_2003357_-|transposase	transposase	transposase	A0A286QQE5	Streptococcus_phage	36.3	1.8e-57
WP_173031744.1|2003432_2003888_+|transposase	IS200/IS605 family transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	52.3	1.6e-32
WP_012390701.1|2004359_2004812_-|transposase	IS200/IS605 family transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	51.5	2.8e-32
WP_087908404.1|2004890_2006180_+|transposase	transposase	transposase	A0A286QQE5	Streptococcus_phage	36.6	2.8e-53
WP_087908405.1|2006313_2007312_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	38.4	1.3e-50
WP_042514012.1|2007842_2009093_-|transposase	transposase	transposase	A0A286QQE5	Streptococcus_phage	37.2	1.8e-57
WP_087908407.1|2009829_2011080_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A286QQE5	Streptococcus_phage	36.5	2.0e-56
WP_087908348.1|2011153_2011609_+|transposase	IS200/IS605 family transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	50.7	5.6e-33
WP_087908409.1|2014896_2016084_+|transposase	IS256 family transposase	transposase	NA	NA	NA	NA
WP_087908443.1|2017379_2018078_-	helix-turn-helix domain-containing protein	NA	A0A0C5AJ29	Paenibacillus_phage	30.4	3.4e-21
WP_057728171.1|2018477_2019836_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_087908087.1|2020897_2021335_-|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	70.1	1.0e-47
WP_087908410.1|2024498_2025497_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	38.4	2.2e-50
WP_087908411.1|2025870_2027157_+|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	31.2	2.3e-47
WP_111522973.1|2029243_2029339_+	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
WP_157667086.1|2029899_2030805_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	29.0	1.8e-14
WP_087908444.1|2030741_2031356_-	helix-turn-helix domain-containing protein	NA	A0A0C5AJ29	Paenibacillus_phage	37.5	6.2e-27
WP_014081459.1|2034781_2035180_-|transposase	IS200/IS605 family transposase	transposase	A0A286QN76	Streptococcus_phage	62.9	1.1e-45
WP_012390701.1|2035644_2036097_-|transposase	IS200/IS605 family transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	51.5	2.8e-32
WP_021349622.1|2036175_2037426_+|transposase	transposase	transposase	A0A286QQE5	Streptococcus_phage	37.0	2.0e-56
WP_012390701.1|2047479_2047932_-|transposase	IS200/IS605 family transposase	transposase	A0A0P0IQC6	Lactobacillus_phage	51.5	2.8e-32
2050990:2051894	attR	TCAATATTGCGCGGATTATTTCTAAGAAATAATTCTGGAAGGAGGCAATTATGAGCATCTACAGTGCTGTTAAAAGTTTGGCAGCAGATCAAGGCAAATCGATCTACAAAATAGAGCACGACTTGAACCGGTACTGTACCCTGTCAAGTTGACACATTAAATAATAAAAACTAGTTGGCCTTGCCAAAGCGGTATTCTGCTGCGGTAAGGTCATTTCTTTTGCCTGAAATAAAGGAATGCGTAAAGTAATCGATACCTTCTGTCACCAGCTGTTCTAAGTCTTCAAACGTTTGTGGTTGTGGTGAGTGTGCTAACCAGATAGATTTAAAATCAGCCCATCAGTGCTCCATCACCGCATTATCAGCTGGTGTTCCTGGGGCTGAGTAACTATGTTGGCTGTTATTACTAGCCAAGTAGTGGTTGAATGCTTTGGAAGTATGTGCTGCTCCGCGATCAGTGTGGATTAGCGGTGCCAGACCTCCGGCTTTCTGCTTGGCCATTTGAAATACTTTAATAGCCCCAGTACTCGTTTCTGTAGGCGTAATAATCCAGCTAAGTGGGTATTGACCGTATAGATCCAGGACAACGTGTAGACGGACTTTGTACTTACGAATATTGTAGGCAATTTCCGTCGTGTCCGTCACCCACACCTGATTTGCGGCAGCTTGTTCAAACTGGCGGTTCAGGGTATTCTGTGCTTCATAAGTTTCCTGCTCCTGCACACGTTTTCTCTTAGGCTGACGATAGTCCGCTTTAATACTGTGTTCCTTCATAATGCGTATGACGCGCTTCTTGTTAACTGTGTATGATAATCTTTCCTGCTTTATCAAACGGGTCATCTTGTCATAACCAACGCAGTGTTTATGTTGTGCTTCTAACTGTTTAACGAGCTTTAAAATTTCTTG	NA	NA	NA	NA
