The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP021732	Escherichia coli strain AR_0114, complete genome	4786118	548665	631082	4786118	tRNA,protease,portal,terminase,head,tail,capsid,integrase,transposase,holin	Escherichia_phage(39.62%)	96	584188:584202	631184:631198
WP_000526135.1|548665_549124_-|transposase	IS200/IS605 family transposase	transposase	I4AZI8	Saccharomonospora_phage	32.3	2.9e-13
WP_000234823.1|549314_550034_-	fatty acid metabolism transcriptional regulator FadR	NA	NA	NA	NA	NA
WP_000406391.1|550254_551796_+	Na(+)/H(+) antiporter NhaB	NA	NA	NA	NA	NA
WP_000943459.1|551941_552472_+	disulfide bond formation protein DsbB	NA	NA	NA	NA	NA
WP_000457616.1|552517_553786_-	translesion error-prone DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	83.4	7.9e-210
WP_000897378.1|553785_554205_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	62.1	6.9e-38
WP_001336523.1|554577_555489_+	hemolysin HlyE	NA	NA	NA	NA	NA
WP_000807626.1|555695_556157_-	YcgN family cysteine cluster protein	NA	NA	NA	NA	NA
WP_000284280.1|556233_556893_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_001295992.1|556964_557258_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000695215.1|557499_557901_+	inhibitor of g-type lysozyme	NA	NA	NA	NA	NA
WP_023149694.1|558003_558372_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001301105.1|558891_559587_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_000101055.1|559610_560423_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_001185665.1|560426_560693_+	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_001131446.1|561442_561562_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001325005.1|561522_561708_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000122462.1|561808_561982_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000726974.1|561983_562328_+	glycine zipper family protein	NA	NA	NA	NA	NA
WP_001065861.1|565770_565989_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001246498.1|566120_567644_-	cyclic diguanylate phosphodiesterase	NA	NA	NA	NA	NA
WP_001065752.1|567975_568224_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000888772.1|568336_568603_-	biofilm/acid-resistance regulator AriR	NA	NA	NA	NA	NA
WP_000858002.1|568631_568904_-	two-component-system connector protein YmgA	NA	NA	NA	NA	NA
WP_000554140.1|568946_569183_-	two-component-system connector protein YcgZ	NA	NA	NA	NA	NA
WP_001299269.1|569496_570708_+	blue light-responsive regulator BluF	NA	NA	NA	NA	NA
WP_000332303.1|570912_571644_+	MerR family transcriptional regulator	NA	Q9EYF2	Enterobacteria_phage	50.5	2.7e-53
WP_000373101.1|571864_572269_+	DUF1398 domain-containing protein	NA	NA	NA	NA	NA
WP_032082692.1|572321_572432_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001295666.1|572970_573294_+	anti-adapter protein IraM	NA	Q8HAJ1	Enterobacteria_phage	65.4	3.0e-41
WP_000444488.1|573396_574647_-	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	96.3	3.2e-22
WP_001248681.1|574818_575472_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA	NA
WP_000476093.1|575481_575943_+	phosphatase NudJ	NA	NA	NA	NA	NA
WP_001297484.1|575996_577103_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_001297479.1|577138_577780_+	high frequency lysogenization protein HflD	NA	NA	NA	NA	NA
WP_000423742.1|577783_579154_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	44.9	1.2e-107
WP_001265471.1|579322_579994_+	two-component system response regulator PhoP	NA	NA	NA	NA	NA
WP_000735412.1|579993_581454_+	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA	NA
WP_000456506.1|581529_582651_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_000359434.1|582699_583926_-	peptidase T	NA	NA	NA	NA	NA
WP_000531594.1|584175_585312_+	spermidine/putrescine ABC transporter ATP-binding protein PotA	NA	Q6GZ03	Mycoplasma_phage	39.8	5.5e-29
584188:584202	attL	AAAAAATTGAATAAA	NA	NA	NA	NA
WP_000799406.1|585295_586159_+	spermidine/putrescine ABC transporter permease PotB	NA	Q6GZ02	Mycoplasma_phage	28.7	6.7e-11
WP_000241001.1|586713_587382_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_072146730.1|587339_587531_-	hypothetical protein	NA	A0A291AX19	Escherichia_phage	89.5	1.0e-12
WP_085948620.1|587496_588710_-|transposase	IS3 family transposase	transposase	Q6H9S3	Enterobacteria_phage	99.3	1.4e-168
WP_042047081.1|588932_589463_-	chaperone of endosialidase	NA	A0A2D1UII2	Escherichia_phage	85.2	2.5e-69
WP_085948620.1|589464_590677_+|transposase	IS3 family transposase	transposase	Q6H9S3	Enterobacteria_phage	99.3	1.4e-168
WP_001233546.1|594068_594668_-	Ail/Lom family outer membrane beta-barrel protein	NA	H6WZM8	Escherichia_phage	95.0	1.6e-107
WP_000515345.1|594735_598215_-	host specificity protein J	NA	A0A291AWT4	Escherichia_phage	89.9	0.0e+00
WP_000090843.1|598275_598884_-|tail	tail assembly protein	tail	A5LH42	Enterobacteria_phage	94.1	1.9e-100
WP_001333568.1|598820_599564_-|tail	phage tail protein	tail	K7PLW1	Enterobacteria_phage	97.2	4.5e-149
WP_001152457.1|599569_600268_-|tail	phage minor tail protein L	tail	A0A1B5FP81	Escherichia_phage	97.0	3.4e-130
WP_001330090.1|600267_600624_-|tail	tail protein	tail	A0A0P0ZDL9	Stx2-converting_phage	66.7	2.8e-40
WP_000224003.1|600601_603829_-|tail	phage tail tape measure protein	tail	A0A1B5FPE2	Escherichia_phage	95.0	0.0e+00
WP_077253127.1|603875_604136_-	DUF4035 domain-containing protein	NA	A0A1B5FP87	Escherichia_phage	95.3	2.3e-39
WP_001324129.1|604177_604564_-|tail	tail assembly protein	tail	A0A1B5FP91	Escherichia_phage	100.0	8.9e-64
WP_000097535.1|604563_605268_-	hypothetical protein	NA	A0A1B5FP82	Escherichia_phage	92.7	1.4e-112
WP_001206700.1|605328_605673_-	DUF3168 domain-containing protein	NA	A0A1B5FP84	Escherichia_phage	96.5	5.1e-55
WP_000968644.1|605669_606119_-	HK97 gp10 family phage protein	NA	S4TR46	Salmonella_phage	81.2	6.1e-64
WP_001147814.1|606115_606454_-|head	phage head closure protein	head	A0A1B5FP90	Escherichia_phage	90.2	7.5e-51
WP_000719064.1|606462_606780_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A1W6JNZ5	Morganella_phage	49.5	5.3e-22
WP_000766109.1|606856_608074_-|capsid	phage major capsid protein	capsid	A0A1W6JP20	Morganella_phage	71.6	5.9e-162
WP_000999828.1|608088_608688_-|head,protease	HK97 family phage prohead protease	head,protease	Q8SBH9	Shigella_phage	81.0	1.9e-89
WP_000923134.1|608680_609907_-|portal	phage portal protein	portal	Q8SBI0	Shigella_phage	83.3	3.7e-204
WP_001140892.1|610054_611812_-|terminase	terminase large subunit	terminase	A0A1B5FP96	Escherichia_phage	99.3	0.0e+00
WP_001333563.1|611811_612294_-|terminase	phage terminase small subunit P27 family	terminase	A0A1B5FPA0	Escherichia_phage	98.1	8.7e-85
WP_001135104.1|612441_612792_-	HNH endonuclease	NA	A0A1B5FP94	Escherichia_phage	96.6	8.0e-64
WP_000738421.1|613317_613611_+	increased serum survival lipoprotein Iss	NA	K7PL54	Enterobacteria_phage	90.7	5.9e-44
WP_075202333.1|613701_613884_-	hypothetical protein	NA	A0A0P0ZE50	Stx2-converting_phage	77.0	2.2e-17
WP_000992097.1|614100_614634_-	lysozyme	NA	Q08J98	Stx2-converting_phage	93.2	1.5e-98
WP_000193264.1|614697_615048_-	YdfR family protein	NA	K7PGU6	Enterobacteria_phage	94.0	1.4e-36
WP_000372595.1|615052_615268_-|holin	holin	holin	A0A2R2Z340	Escherichia_phage	98.6	3.4e-33
WP_000874243.1|615575_615764_-	DUF1737 domain-containing protein	NA	H6WZJ9	Escherichia_phage	95.2	7.2e-27
WP_001333560.1|616024_616360_+	anti-adapter protein IraM	NA	Q8HAJ1	Enterobacteria_phage	74.8	1.4e-44
WP_001333559.1|616430_616643_+	hypothetical protein	NA	NA	NA	NA	NA
WP_106104550.1|617131_617218_-	DUF3927 domain-containing protein	NA	NA	NA	NA	NA
WP_000762879.1|617612_618434_-	antitermination protein	NA	K7P7B9	Enterobacteria_phage	58.2	5.1e-77
WP_000139999.1|618430_618811_-	RusA family crossover junction endodeoxyribonuclease	NA	V5URS4	Shigella_phage	63.6	1.3e-35
WP_001221526.1|618811_619870_-	DUF968 domain-containing protein	NA	A0A291AWV9	Escherichia_phage	48.0	7.5e-89
WP_032155008.1|619871_620150_-	hypothetical protein	NA	A0A077KB22	Edwardsiella_phage	37.1	6.1e-06
WP_001013636.1|620317_620530_-	type I toxin-antitoxin system Hok family toxin	NA	A0A0U2QV81	Escherichia_phage	96.9	8.9e-26
WP_001224662.1|621564_621747_-	hypothetical protein	NA	A0A2R2Z308	Escherichia_phage	100.0	1.4e-27
WP_000403785.1|621840_622197_-	hypothetical protein	NA	A0A2R2Z307	Escherichia_phage	99.2	1.8e-58
WP_001151150.1|622254_622677_-	DUF977 family protein	NA	A0A0U2QQN3	Escherichia_phage	90.6	2.6e-64
WP_001262390.1|622717_623788_-	hypothetical protein	NA	A0A088CD36	Shigella_phage	56.6	2.6e-52
WP_000693850.1|623859_624285_-	Rha family transcriptional regulator	NA	NA	NA	NA	NA
WP_000747951.1|624268_624511_-	hypothetical protein	NA	H9C161	Pectobacterium_phage	55.8	4.8e-07
WP_001420344.1|624902_625241_+	peptidase S24	NA	H9C160	Pectobacterium_phage	32.0	2.5e-06
WP_001092153.1|625672_625873_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001171946.1|625965_626184_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001517906.1|626148_626352_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000854558.1|626752_626941_+	cell division inhibition protein DicB	NA	NA	NA	NA	NA
WP_001070255.1|626937_627129_+	DUF1482 family protein	NA	NA	NA	NA	NA
WP_000102136.1|627222_629664_+	exonuclease	NA	V5UQJ3	Shigella_phage	46.9	3.1e-114
WP_000003742.1|629725_629995_+	excisionase	NA	NA	NA	NA	NA
WP_000074971.1|629963_631082_+|integrase	tyrosine-type recombinase/integrase	integrase	Q77Z04	Phage_21	44.4	1.6e-84
631184:631198	attR	AAAAAATTGAATAAA	NA	NA	NA	NA
>prophage 2
NZ_CP021732	Escherichia coli strain AR_0114, complete genome	4786118	1204887	1241402	4786118	transposase	Escherichia_phage(40.0%)	36	NA	NA
WP_001615628.1|1204887_1206000_-|transposase	IS4-like element IS421 family transposase	transposase	NA	NA	NA	NA
WP_000956455.1|1206076_1206229_-	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA	NA
WP_000343760.1|1206486_1207707_+|transposase	ISL3-like element ISKox3 family transposase	transposase	NA	NA	NA	NA
WP_001130654.1|1208005_1209124_+	glutamate--cysteine ligase	NA	NA	NA	NA	NA
WP_001067855.1|1209261_1209966_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_000262446.1|1210050_1210413_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000217395.1|1210498_1210990_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_001333498.1|1211160_1211418_-	transcriptional regulator	NA	A0A2I7S995	Vibrio_phage	65.7	8.3e-18
WP_001118619.1|1212061_1212985_+|transposase	IS5-like element IS903B family transposase	transposase	Q9MCT5	Escherichia_phage	100.0	2.2e-177
WP_001276168.1|1213202_1215284_-	glycosyltransferase	NA	A0A2K9L4U1	Tupanvirus	27.7	2.5e-19
WP_000684771.1|1216524_1217679_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_001581568.1|1217688_1218720_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_000018742.1|1218785_1219538_-	O89/0101/0162 family O-antigen ABC transporter ATP-binding protein Wzt	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	29.4	1.1e-12
WP_000665069.1|1219544_1220324_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_001048111.1|1220320_1222537_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_000154260.1|1222570_1223587_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L5H6	Tupanvirus	47.6	9.1e-84
WP_000609089.1|1224031_1224925_-	GalU regulator GalF	NA	A0A127AW70	Bacillus_phage	40.3	3.3e-45
WP_001067855.1|1225926_1226631_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_000861760.1|1226870_1227311_-	translesion error-prone DNA polymerase V autoproteolytic subunit MucA	NA	A0A1W6JNS2	Morganella_phage	48.8	1.2e-27
WP_000447669.1|1227725_1228151_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000881513.1|1228208_1228613_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000932975.1|1228622_1228862_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000545925.1|1229747_1230044_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001750003.1|1230040_1230400_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001750002.1|1230468_1230753_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012561126.1|1230961_1231294_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000129958.1|1232646_1233156_+	antirestriction protein ArdA	NA	NA	NA	NA	NA
WP_000214483.1|1233882_1234062_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001749971.1|1234116_1234437_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048968061.1|1234547_1234781_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000414913.1|1235073_1235442_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001749973.1|1235443_1236160_-	StdB	NA	NA	NA	NA	NA
WP_020319858.1|1236168_1236306_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001749975.1|1237078_1237495_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000342688.1|1237496_1239026_+	type IV secretion system DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_001067855.1|1240697_1241402_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
>prophage 3
NZ_CP021732	Escherichia coli strain AR_0114, complete genome	4786118	1569232	1608811	4786118	transposase,plate,integrase	Enterobacteria_phage(25.0%)	37	1560901:1560916	1591777:1591792
1560901:1560916	attL	ATAAAGATGAAGCCGC	NA	NA	NA	NA
WP_000772656.1|1569232_1570441_-|integrase	tyrosine-type recombinase/integrase	integrase	Q7M297	Enterobacteria_phage	56.5	7.7e-130
WP_000893278.1|1570794_1572048_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	47.2	9.8e-96
WP_001285288.1|1572059_1573163_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.4	1.1e-61
WP_000749867.1|1573450_1574506_+	phosphoporin PhoE	NA	Q1MVN1	Enterobacteria_phage	61.1	1.6e-118
WP_000174677.1|1574544_1574946_-	sigma factor-binding protein Crl	NA	NA	NA	NA	NA
WP_000189532.1|1575003_1576248_-	esterase FrsA	NA	NA	NA	NA	NA
WP_001291990.1|1576339_1576798_-	xanthine phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_001292994.1|1577058_1578516_+	cytosol nonspecific dipeptidase	NA	NA	NA	NA	NA
WP_001326471.1|1578572_1579109_-	peptide chain release factor H	NA	NA	NA	NA	NA
WP_001295202.1|1579041_1579308_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001059892.1|1579613_1580066_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_001263489.1|1580075_1580474_-	type II toxin-antitoxin system YafO family toxin	NA	NA	NA	NA	NA
WP_000554758.1|1580476_1580770_-	type I toxin-antitoxin system antitoxin YafN	NA	NA	NA	NA	NA
WP_001226164.1|1580821_1581877_-	DNA polymerase IV	NA	NA	NA	NA	NA
WP_001333407.1|1581947_1582718_-	putative lateral flagellar export/assembly protein LafU	NA	NA	NA	NA	NA
WP_001334802.1|1582677_1584417_+	flagellar type III secretion system protein FlhA	NA	NA	NA	NA	NA
WP_000006255.1|1584640_1585138_-|transposase	REP-associated tyrosine transposase RayT	transposase	NA	NA	NA	NA
WP_000056849.1|1585313_1586063_-	C40 family peptidase	NA	A0A1V0DZX6	Clostridioides_phage	38.5	9.0e-20
WP_000729703.1|1586272_1586533_+	type II toxin-antitoxin system antitoxin DinJ	NA	NA	NA	NA	NA
WP_000615983.1|1586535_1586814_+	type II toxin-antitoxin system mRNA interferase toxin YafQ	NA	NA	NA	NA	NA
WP_001225679.1|1586969_1587710_+	murein L,D-transpeptidase	NA	NA	NA	NA	NA
WP_000333380.1|1587680_1588448_-	class II glutamine amidotransferase	NA	NA	NA	NA	NA
WP_000284050.1|1588653_1589232_-	D-sedoheptulose 7-phosphate isomerase	NA	A0A067XQR2	Caulobacter_phage	32.0	1.1e-14
WP_000973083.1|1589471_1591916_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
1591777:1591792	attR	ATAAAGATGAAGCCGC	NA	NA	NA	NA
WP_000532698.1|1591958_1592432_-	C-lysozyme inhibitor	NA	NA	NA	NA	NA
WP_001118036.1|1592585_1593356_+	2-oxoglutaramate amidase	NA	NA	NA	NA	NA
WP_000420818.1|1593396_1594533_-|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
WP_001101839.1|1594963_1595356_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000508724.1|1595333_1599566_-	RHS repeat protein	NA	A0A2H4JHK7	uncultured_Caudovirales_phage	43.1	6.4e-22
WP_032329316.1|1599641_1601783_-	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	25.0	2.4e-25
WP_001142958.1|1601992_1602511_-	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_000037397.1|1603205_1603706_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_000123970.1|1603740_1603965_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000056989.1|1604015_1605491_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_000611744.1|1605497_1605911_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_000393852.1|1605914_1607765_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_000348793.1|1607728_1608811_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
>prophage 4
NZ_CP021732	Escherichia coli strain AR_0114, complete genome	4786118	3706517	3713657	4786118		Escherichia_phage(83.33%)	6	NA	NA
WP_001278994.1|3706517_3707156_-	aldolase	NA	A0A077SK32	Escherichia_phage	75.0	1.4e-82
WP_001521147.1|3707152_3708415_-	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	61.4	1.3e-135
WP_000847993.1|3708411_3709320_-	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	76.5	1.1e-117
WP_001295181.1|3709515_3710283_+	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	56.7	2.5e-70
WP_001141345.1|3710333_3710990_-	protein-serine/threonine phosphatase	NA	A0A077SLQ6	Escherichia_phage	47.0	5.0e-51
WP_001272917.1|3711095_3713657_-	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	20.8	9.2e-32
>prophage 5
NZ_CP021732	Escherichia coli strain AR_0114, complete genome	4786118	4330644	4340085	4786118		Enterobacteria_phage(85.71%)	10	NA	NA
WP_000569357.1|4330644_4331571_+	glycine betaine ABC transporter ATP binding protein YehX	NA	G3M9Y6	Bacillus_virus	30.8	1.7e-23
WP_000783120.1|4331575_4332307_+	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA	NA
WP_001216963.1|4332287_4332395_-	protein YohO	NA	NA	NA	NA	NA
WP_001240401.1|4332454_4333186_-	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	99.5	9.7e-112
WP_001295431.1|4333407_4335093_+	two-component regulatory system sensor histidine kinase BtsS	NA	Q9EYF3	Enterobacteria_phage	99.6	2.5e-304
WP_000598641.1|4335089_4335809_+	two-component system response regulator BtsR	NA	NA	NA	NA	NA
WP_000950409.1|4335855_4336326_+	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	100.0	5.2e-82
WP_001295429.1|4336365_4336827_-	YehR family lipoprotein	NA	Q9EYF5	Enterobacteria_phage	100.0	1.9e-76
WP_001375261.1|4336951_4338952_-	hypothetical protein	NA	Q9EYF6	Enterobacteria_phage	96.1	0.0e+00
WP_001333512.1|4338948_4340085_-	VWA domain-containing protein	NA	Q9EYF7	Enterobacteria_phage	97.7	1.9e-162
>prophage 1
NZ_CP021733	Escherichia coli strain AR_0114 plasmid unitig_1, complete sequence	114267	32319	68664	114267	transposase,integrase	Escherichia_phage(38.46%)	36	56411:56470	68658:69478
WP_000016970.1|32319_33126_-|integrase	phage integrase family protein	integrase	I3WFA4	Macacine_betaherpesvirus	100.0	5.8e-57
WP_001159871.1|33126_33432_-	type II toxin-antitoxin system toxin CcdB	NA	NA	NA	NA	NA
WP_000813630.1|33433_33652_-	type II toxin-antitoxin system antitoxin CcdA	NA	NA	NA	NA	NA
WP_001261286.1|34211_34442_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_001034044.1|34438_34855_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_001128474.1|34929_36495_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_000361402.1|36479_37502_+	helicase UvrD	NA	NA	NA	NA	NA
WP_000968139.1|38552_39410_-	iron/manganese ABC transporter permease subunit SitD	NA	NA	NA	NA	NA
WP_001101723.1|39406_40264_-	iron/manganese ABC transporter permease subunit SitC	NA	NA	NA	NA	NA
WP_000983710.1|40260_41088_-	iron/manganese ABC transporter ATP-binding protein SitB	NA	A0A1M7XV31	Cedratvirus	27.0	3.6e-14
WP_000949005.1|41087_42002_-	iron/manganese ABC transporter substrate-binding protein SitA	NA	NA	NA	NA	NA
WP_000361611.1|44983_45961_+	RepB family plasmid replication initiator protein	NA	J9Q7H0	Salmonella_phage	63.9	4.6e-101
WP_001066953.1|46245_46986_-	site-specific recombinase	NA	I3WFA4	Macacine_betaherpesvirus	57.6	2.0e-24
WP_001309252.1|47106_47295_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001072358.1|47661_48831_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001322642.1|49677_49950_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_001496335.1|51192_53163_+	TonB-dependent hemoglobin/transferrin/lactoferrin family receptor	NA	NA	NA	NA	NA
WP_000977394.1|53169_53961_+	DUF4198 domain-containing protein	NA	NA	NA	NA	NA
WP_001317493.1|54699_55482_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	5.9e-139
WP_001467509.1|55478_56390_-|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	98.7	5.2e-179
56411:56470	attL	GGGCACTGTTGCAAAGTTAGCGATGAGGCAGCCTTTTGTCTTATTCAAAGGCCTTACATT	NA	NA	NA	NA
WP_001067855.1|56463_57168_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_000130000.1|57341_57647_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000184001.1|57657_58863_-	chromate efflux transporter	NA	NA	NA	NA	NA
WP_000376616.1|59018_59222_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000259031.1|59349_60189_-	sulfonamide-resistant dihydropteroate synthase Sul1	NA	A0A0B5J4J5	Pandoravirus	27.2	5.0e-11
WP_000679427.1|60182_60530_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA	NA
WP_001256773.1|60721_61981_-	chloramphenicol efflux MFS transporter CmlA6	NA	S4TR35	Salmonella_phage	31.7	2.8e-26
WP_001206316.1|62242_63034_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA	NA
WP_000381802.1|63091_63625_-	aminoglycoside nucleotidyltransferase ANT(2'')-Ia	NA	NA	NA	NA	NA
WP_015057121.1|63770_64730_+|integrase	class 1 integron integrase IntI1	integrase	A0A1P8DJJ6	Virus_Rctr41k	40.5	1.7e-47
WP_001067855.1|64620_65325_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_000131876.1|65642_65846_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001251694.1|65836_66058_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001415369.1|66292_66622_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000027057.1|66808_67669_-	class A broad-spectrum beta-lactamase TEM-1	NA	Q1MVP3	Enterobacteria_phage	100.0	4.6e-161
WP_001067855.1|67959_68664_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
68658:69478	attR	AATGTAAGGCCTTTGAATAAGACAAAAGGCTGCCTCATCGCTAACTTTGCAACAGTGCCCCGCAAACAGGTTACTCGCCTGGGGATTCCCTTTCGACCCGAGCATCCGTATGATACTCATGCTCGATTATTATTATTATAGAAGCCCCCATGAATAAATCGCTCATCATTTTCGGCATCGTCAACATAACCTCGGACAGTTTCTCCGATGGAGGCCGGTATCTGGCGCCAGACGCAGCCATTGCGCAGGCGCGTAAGCTGATGGCCGAGGGGGCAGATGTGATCGACCTCGGTCCGGCATCCAGCAATCCCGACGCCGCGCCTGTTTCGTCCGACACAGAAATCGCGCGTATCGCGCCGGTGCTGGACGCGCTCAAGGCAGATGGCATTCCCGTCTCGCTCGACAGTTATCAACCCGCGACGCAAGCCTATGCCTTGTCGCGTGGTGTGGCCTATCTCAATGATATTCGCGGTTTTCCAGACGCTGCGTTCTATCCGCAATTGGCGAAATCATCTGCCAAACTCGTCGTTATGCATTCGGTGCAAGACGGGCAGGCAGATCGGCGCGAGGCACCCGCTGGCGACATCATGGATCACATTGCGGCGTTCTTTGACGCGCGCATCGCGGCGCTGACGGGTGCCGGTATCAAACGCAACCGCCTTGTCCTTGATCCCGGCATGGGGTTTTTTCTGGGGGCTGCTCCCGAAACCTCGCTCTCGGTGCTGGCGCGGTTCGATGAATTGCGGCTGCGCTTCGATTTGCCGGTGCTTCTGTCTGTTTCGCGCAAATCCTTTCTGCGCGCGCTCACAGGCCGTGGTCCG	NA	NA	NA	NA
>prophage 1
NZ_CP021734	Escherichia coli strain AR_0114 plasmid unitig_2, complete sequence	85195	6194	69652	85195	transposase,integrase	Escherichia_phage(30.3%)	61	22278:22337	74415:75234
WP_001776119.1|6194_6722_+	phospholipase D family protein	NA	A0A1B2LRT6	Wolbachia_phage	39.5	5.7e-21
WP_001776120.1|6754_7186_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001776122.1|7665_8631_-	DUF1738 domain-containing protein	NA	A0A1V0EEV1	Caulobacter_phage	42.7	1.6e-58
WP_015060092.1|8762_9032_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023338070.1|9100_10585_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
WP_017694266.1|10986_11226_+	hypothetical protein	NA	I6PD82	Cronobacter_phage	52.6	1.6e-18
WP_023338071.1|11227_11611_+	hypothetical protein	NA	A0A077SK24	Escherichia_phage	45.4	2.0e-23
WP_021312774.1|11801_12083_+	addiction module killer protein	NA	A0A2L1IV28	Escherichia_phage	49.5	1.4e-21
WP_001698908.1|12082_12385_+	HigA family addiction module antidote protein	NA	A0A2L1IV52	Escherichia_phage	47.7	3.7e-17
WP_087920733.1|13021_13945_-|transposase	IS5 family transposase	transposase	Q1MVF0	Enterobacteria_phage	98.4	1.3e-174
WP_001076427.1|15540_16401_+	replication protein RepA	NA	Q71TL8	Escherichia_phage	100.0	4.7e-158
WP_000817632.1|16800_18006_+	ParA family protein	NA	Q1MVJ3	Enterobacteria_phage	100.0	2.0e-226
WP_023338075.1|18002_18968_+	ParB/RepB/Spo0J family partition protein	NA	Q1MVJ4	Enterobacteria_phage	98.8	6.3e-167
22278:22337	attL	GGCACTGTTGCAAAGTTAGCGATGAGGCAGCCTTTTGTCTTATTCAAAGGCCTTACATTT	NA	NA	NA	NA
WP_001067855.1|22329_23034_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_157669132.1|23024_23417_+	hypothetical protein	NA	Q71TB2	Escherichia_phage	92.4	1.4e-56
WP_023338079.1|23426_24242_+	hypothetical protein	NA	Q1MVJ7	Enterobacteria_phage	95.2	6.6e-109
WP_029396071.1|24277_24859_+	hypothetical protein	NA	Q1MVJ8	Enterobacteria_phage	100.0	5.9e-104
WP_023338081.1|24870_25380_+	hypothetical protein	NA	Q1MVJ9	Enterobacteria_phage	98.2	9.5e-90
WP_001352007.1|25496_25652_-	type I toxin-antitoxin system toxin HokD	NA	A0A1I9LJU7	Stx_converting_phage	90.2	4.0e-15
WP_133166674.1|25956_26751_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A077SLN2	Escherichia_phage	100.0	8.9e-127
WP_023338085.1|27771_28041_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001114073.1|28941_29295_+	As(III)-sensing metalloregulatory transcriptional repressor ArsR	NA	A0A2H4J145	uncultured_Caudovirales_phage	50.0	4.1e-23
WP_000783215.1|29342_29705_+	arsenite efflux transporter metallochaperone ArsD	NA	NA	NA	NA	NA
WP_000027057.1|30930_31791_-	class A broad-spectrum beta-lactamase TEM-1	NA	Q1MVP3	Enterobacteria_phage	100.0	4.6e-161
WP_001235713.1|31973_32531_-	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	100.0	7.0e-94
WP_004152391.1|33645_35361_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_004152392.1|35470_38500_+|transposase	IS3-like element Tn4401 family transposase	transposase	NA	NA	NA	NA
WP_004199214.1|38606_39632_+|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	50.3	1.4e-87
WP_004152394.1|39628_40408_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	61.8	2.5e-89
WP_004152396.1|40794_41676_+	carbapenem-hydrolyzing class A beta-lactamase KPC-3	NA	A0A1B0VBP7	Salmonella_phage	52.2	2.8e-73
WP_004152397.1|41925_43245_-|transposase	IS1182-like element ISKpn6 family transposase	transposase	Q9MBP7	Staphylococcus_prophage	24.2	1.9e-12
WP_000792636.1|47262_47796_-	phospholipase D family protein	NA	A0A1B2LRT6	Wolbachia_phage	33.9	5.8e-21
WP_000128596.1|47795_48791_-	conjugal transfer protein TraG	NA	NA	NA	NA	NA
WP_000101710.1|48832_49993_-	TrbI/VirB10 family protein	NA	NA	NA	NA	NA
WP_019706045.1|49992_50814_-	conjugal transfer protein TraO	NA	NA	NA	NA	NA
WP_000646594.1|50887_51586_-	type IV secretion system protein	NA	NA	NA	NA	NA
WP_001257173.1|51575_51722_-	conjugal transfer protein TraN	NA	NA	NA	NA	NA
WP_001749958.1|51804_52845_-	type IV secretion system protein	NA	NA	NA	NA	NA
WP_001749959.1|52860_53088_-	IncN-type entry exclusion lipoprotein EexN	NA	NA	NA	NA	NA
WP_001749960.1|53095_53809_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001749961.1|53826_56427_-	VirB4 family type IV secretion/conjugal transfer ATPase	NA	NA	NA	NA	NA
WP_000496058.1|56426_56744_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001749962.1|56793_57087_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000440698.1|57096_57378_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001749963.1|57386_58121_-	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_024129965.1|58184_58535_+	H-NS histone family protein	NA	NA	NA	NA	NA
WP_087920731.1|58550_58895_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001749965.1|58891_59206_+	KikA protein	NA	NA	NA	NA	NA
WP_001452736.1|59241_59553_+	hypothetical protein	NA	NA	NA	NA	NA
WP_064577928.1|59761_60250_+	restriction endonuclease	NA	NA	NA	NA	NA
WP_001749967.1|60254_60461_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001288432.1|60842_62276_+	DNA cytosine methyltransferase	NA	E5E3X6	Burkholderia_phage	50.6	7.0e-106
WP_004098817.1|62309_63524_-	type II site-specific deoxyribonuclease	NA	E5E3X4	Burkholderia_phage	42.5	1.2e-34
WP_001389365.1|63784_64549_-|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
WP_004152787.1|64932_65073_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000376623.1|65055_65556_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000259031.1|65683_66523_-	sulfonamide-resistant dihydropteroate synthase Sul1	NA	A0A0B5J4J5	Pandoravirus	27.2	5.0e-11
WP_000679427.1|66516_66864_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA	NA
WP_001317507.1|67047_67521_-	trimethoprim-resistant dihydrofolate reductase DfrA5	NA	G3MBI7	Bacillus_virus	27.7	1.0e-13
WP_000845048.1|67676_68690_+|integrase	class 1 integron integrase IntI1	integrase	A0A1P8DJJ6	Virus_Rctr41k	45.5	1.0e-71
WP_001749988.1|69082_69652_+	recombinase family protein	NA	E5FFF9	Burkholderia_phage	43.2	5.2e-36
74415:75234	attR	GGCACTGTTGCAAAGTTAGCGATGAGGCAGCCTTTTGTCTTATTCAAAGGCCTTACATTTCAAAAACTCTGCTTACCAGGCGCATTTCGCCCAGGGGATCACCATAATAAAATGCTGAGGCCTGGCCTTTGCGTAGTGCACGCATCACCTCAATACCTTTGATGGTGGCGTAAGCCGTCTTCATGGATTTAAATCCCAGCGTGGCGCCGATTATCCGTTTCAGTTTGCCATGATCGCATTCAATCACGTTGTTCCGGTACTTAATCTGTCGGTGTTCAACGTCAGACGGGCACCGGCCTTCGCGTTTGAGCAGAGCAAGCGCGCGACCATAGGCGGGCGCTTTATCCGTGTTGATGAATCGCGGGATCTGCCACTTCTTCACGTTGTTGAGGATTTTACCCAGAAACCGGTATGCAGCTTTGCTGTTACGACGGGAGGAGAGATAAAAATCGACAGTGCGGCCCCGGCTGTCGACGGCCCGGTACAGATACGCCCAGCGGCCATTGACCTTCACGTAGGTTTCATCCATGTGCCACGGGCAAAGATCGGAAGGGTTACGCCAGTACCAGCGCAGCCGTTTTTCCATTTCAGGCGCATAACGCTGAACCCAGCGGTAAATCGTGGAGTGATCGACATTCACTCCGCGTTCAGCCAGCATCTCCTGCAGCTCACGGTAACTGATGCCGTATTTGCAGTACCAGCGTACGGCCCACAGAATGATGTCACGCTGAAAATGCCGGCCTTTGAATGGGTTCATGTGCAGCTCCATCAGCAAAAGGGGATGATAAGTTTATCACCACCGACTATTTGCAACAGTGCC	NA	NA	NA	NA
