assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002180135.1_ASM218013v1	NZ_CP021683	Escherichia coli strain AR_0162, complete genome	1	755043-755377	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3	PD-DExK,RT,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,c2c9_V-U4	Unclear	GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACCGA,GTGTTCCCCGCGCCAGCGGGGATAAACC	28,30,28	0	0	NA	NA	I-E:I-E:I-E	5,5,5	5	Unclear	PD-DExK,RT,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,c2c9_V-U4	NA|47aa|up_1|NZ_CP021683.1_753752_753893_-,NA	NA|434aa|up_9|NZ_CP021683.1_744449_745751_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_8|NZ_CP021683.1_745798_748033_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_7|NZ_CP021683.1_748110_748359_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_6|NZ_CP021683.1_748358_748694_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_5|NZ_CP021683.1_748764_749556_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_4|NZ_CP021683.1_749783_751421_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_3|NZ_CP021683.1_751508_752807_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_2|NZ_CP021683.1_752866_753739_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|47aa|up_1|NZ_CP021683.1_753752_753893_-	NA	NA|224aa|up_0|NZ_CP021683.1_754031_754703_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP021683.1_756014_757493_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP021683.1_757519_758797_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP021683.1_759115_759901_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP021683.1_759970_761425_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|446aa|down_4|NZ_CP021683.1_761518_762856_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|NZ_CP021683.1_762833_763613_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_6|NZ_CP021683.1_763609_764470_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|NZ_CP021683.1_764617_765193_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|NZ_CP021683.1_765209_765470_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|NZ_CP021683.1_765460_766732_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCF_002180135.1_ASM218013v1	NZ_CP021683	Escherichia coli strain AR_0162, complete genome	2	780926-781627	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	PD-DExK,RT,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,c2c9_V-U4	Type I-E	GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	7,11,11	11	TypeI-E	PD-DExK,RT,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,c2c9_V-U4	NA,NA	NA|571aa|up_9|NZ_CP021683.1_769289_771002_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_8|NZ_CP021683.1_771076_771811_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	cas3|889aa|up_7|NZ_CP021683.1_772169_774836_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|495aa|up_6|NZ_CP021683.1_775274_776759_+	PRK09693, PRK09693, Cascade antiviral complex protein; Validated	cse2gr11|161aa|up_5|NZ_CP021683.1_776751_777234_+	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|364aa|up_4|NZ_CP021683.1_777246_778338_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|225aa|up_3|NZ_CP021683.1_778340_779015_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas6e|200aa|up_2|NZ_CP021683.1_779001_779601_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|306aa|up_1|NZ_CP021683.1_779616_780534_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|95aa|up_0|NZ_CP021683.1_780535_780820_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP021683.1_781709_782747_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP021683.1_782998_783907_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP021683.1_783908_785336_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP021683.1_785335_785941_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP021683.1_785990_786314_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP021683.1_786507_786819_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP021683.1_786837_787548_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP021683.1_787547_788027_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP021683.1_788023_789073_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP021683.1_789053_789815_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_002180135.1_ASM218013v1	NZ_CP021683	Escherichia coli strain AR_0162, complete genome	3	1277409-1277526	3	CRISPRCasFinder	no		PD-DExK,RT,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,c2c9_V-U4	Orphan	CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	31	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,RT,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,c2c9_V-U4	NA,NA	NA|62aa|up_9|NZ_CP021683.1_1266694_1266880_-	PRK09956, PRK09956, ISNCY family transposase	NA|300aa|up_8|NZ_CP021683.1_1266892_1267792_-	PRK09956, PRK09956, ISNCY family transposase	NA|397aa|up_7|NZ_CP021683.1_1267984_1269175_-	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|420aa|up_6|NZ_CP021683.1_1269171_1270431_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_5|NZ_CP021683.1_1270420_1272049_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_4|NZ_CP021683.1_1272321_1273680_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_3|NZ_CP021683.1_1273684_1274761_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|217aa|up_2|NZ_CP021683.1_1275223_1275874_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|NZ_CP021683.1_1275927_1276182_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|NZ_CP021683.1_1276181_1277312_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|NZ_CP021683.1_1277545_1279831_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1251aa|down_1|NZ_CP021683.1_1280526_1284279_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|NZ_CP021683.1_1284406_1285129_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|NZ_CP021683.1_1285275_1287903_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|563aa|down_4|NZ_CP021683.1_1288051_1289740_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_5|NZ_CP021683.1_1289736_1290360_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1465aa|down_6|NZ_CP021683.1_1290503_1294898_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|550aa|down_7|NZ_CP021683.1_1294898_1296548_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|259aa|down_8|NZ_CP021683.1_1296552_1297329_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|395aa|down_9|NZ_CP021683.1_1297402_1298587_-	PRK05790, PRK05790, putative acyltransferase; Provisional
GCF_002180135.1_ASM218013v1	NZ_CP021683	Escherichia coli strain AR_0162, complete genome	4	1879047-1879170	4	CRISPRCasFinder	no	DEDDh	PD-DExK,RT,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,c2c9_V-U4	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,RT,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,c2c9_V-U4	NA,NA|30aa|down_7|NZ_CP021683.1_1888066_1888156_+	NA|471aa|up_9|NZ_CP021683.1_1868501_1869914_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP021683.1_1870470_1870680_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP021683.1_1871134_1871761_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP021683.1_1871781_1873884_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|216aa|up_5|NZ_CP021683.1_1873887_1874535_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP021683.1_1874598_1875267_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP021683.1_1875263_1876049_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP021683.1_1876052_1876865_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP021683.1_1876876_1878481_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP021683.1_1878606_1878912_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP021683.1_1879484_1880741_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP021683.1_1880781_1882155_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP021683.1_1882369_1883011_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP021683.1_1883050_1884199_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP021683.1_1884489_1885701_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP021683.1_1885813_1886746_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP021683.1_1886742_1887768_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP021683.1_1888066_1888156_+	NA	NA|390aa|down_8|NZ_CP021683.1_1888321_1889491_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP021683.1_1889725_1890307_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_002180135.1_ASM218013v1	NZ_CP021683	Escherichia coli strain AR_0162, complete genome	5	2549321-2549412	5	CRISPRCasFinder	no		PD-DExK,RT,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,c2c9_V-U4	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,RT,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,c2c9_V-U4	NA|70aa|up_9|NZ_CP021683.1_2538397_2538607_-,NA	NA|70aa|up_9|NZ_CP021683.1_2538397_2538607_-	NA	NA|1321aa|up_8|NZ_CP021683.1_2538661_2542624_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP021683.1_2542663_2543302_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP021683.1_2543589_2544681_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP021683.1_2544680_2545373_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP021683.1_2545384_2545771_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP021683.1_2545778_2546579_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP021683.1_2546588_2547179_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP021683.1_2547189_2547684_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP021683.1_2547704_2549033_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP021683.1_2549835_2550432_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP021683.1_2550452_2550680_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP021683.1_2550717_2551959_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|419aa|down_3|NZ_CP021683.1_2552251_2553508_-	PRK09784, PRK09784, YccE family protein	NA|307aa|down_4|NZ_CP021683.1_2553768_2554689_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_5|NZ_CP021683.1_2554688_2554994_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_6|NZ_CP021683.1_2555145_2555745_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_7|NZ_CP021683.1_2555741_2558288_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_8|NZ_CP021683.1_2558287_2559460_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_9|NZ_CP021683.1_2559589_2560282_+	PRK10766, PRK10766, two-component system response regulator TorR
GCF_002180135.1_ASM218013v1	NZ_CP021683	Escherichia coli strain AR_0162, complete genome	6	2810817-2810961	6	CRISPRCasFinder	no		PD-DExK,RT,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,c2c9_V-U4	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,RT,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,c2c9_V-U4	NA,NA	NA|330aa|up_9|NZ_CP021683.1_2798715_2799705_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|303aa|up_8|NZ_CP021683.1_2800101_2801010_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|674aa|up_7|NZ_CP021683.1_2801201_2803223_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|226aa|up_6|NZ_CP021683.1_2803801_2804479_-	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD	NA|252aa|up_5|NZ_CP021683.1_2804471_2805227_-	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional	NA|385aa|up_4|NZ_CP021683.1_2805213_2806368_-	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed	NA|347aa|up_3|NZ_CP021683.1_2806364_2807405_-	PRK15108, PRK15108, biotin synthase; Provisional	NA|430aa|up_2|NZ_CP021683.1_2807491_2808781_+	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated	NA|159aa|up_1|NZ_CP021683.1_2808839_2809316_+	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional	NA|428aa|up_0|NZ_CP021683.1_2809467_2810751_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|NZ_CP021683.1_2810984_2813246_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|478aa|down_1|NZ_CP021683.1_2813428_2814862_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_2|NZ_CP021683.1_2814937_2815990_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_3|NZ_CP021683.1_2816173_2817127_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_4|NZ_CP021683.1_2817167_2818163_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_5|NZ_CP021683.1_2818317_2819136_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_6|NZ_CP021683.1_2819136_2820195_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_7|NZ_CP021683.1_2820197_2820887_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_8|NZ_CP021683.1_2820886_2821660_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_9|NZ_CP021683.1_2821826_2821976_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ
GCF_002180135.1_ASM218013v1	NZ_CP021683	Escherichia coli strain AR_0162, complete genome	7	3060939-3061035	7	CRISPRCasFinder	no		PD-DExK,RT,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,c2c9_V-U4	Orphan	TTGTAGGCCTGATAAGATGCGTCAAGC	27	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,RT,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,c2c9_V-U4	NA,NA	NA|231aa|up_9|NZ_CP021683.1_3052734_3053427_-	PRK15195, PRK15195, molecular chaperone FimC	NA|181aa|up_8|NZ_CP021683.1_3053646_3054189_-	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA	NA|289aa|up_7|NZ_CP021683.1_3054659_3055526_+	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|71aa|up_6|NZ_CP021683.1_3055527_3055740_+	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|174aa|up_5|NZ_CP021683.1_3055847_3056369_+	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|462aa|up_4|NZ_CP021683.1_3056404_3057790_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|165aa|up_3|NZ_CP021683.1_3057963_3058458_+	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|241aa|up_2|NZ_CP021683.1_3058460_3059183_+	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|170aa|up_1|NZ_CP021683.1_3059300_3059810_+	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|356aa|up_0|NZ_CP021683.1_3059806_3060874_+	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|298aa|down_0|NZ_CP021683.1_3061068_3061962_-	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|272aa|down_1|NZ_CP021683.1_3061958_3062774_-	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|420aa|down_2|NZ_CP021683.1_3062784_3064044_-	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|556aa|down_3|NZ_CP021683.1_3064053_3065721_-	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|350aa|down_4|NZ_CP021683.1_3066037_3067087_+	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional	NA|412aa|down_5|NZ_CP021683.1_3067108_3068344_+	TIGR03176, AllC, allantoate amidohydrolase	NA|262aa|down_6|NZ_CP021683.1_3068354_3069140_+	TIGR03214, ura-cupin, putative allantoin catabolism protein	NA|382aa|down_7|NZ_CP021683.1_3069367_3070513_-	PRK09932, PRK09932, glycerate 3-kinase	NA|434aa|down_8|NZ_CP021683.1_3070534_3071836_-	PRK11412, PRK11412, uracil/xanthine transporter	NA|454aa|down_9|NZ_CP021683.1_3071892_3073254_-	PRK08044, PRK08044, allantoinase AllB
GCF_002180135.1_ASM218013v1	NZ_CP021683	Escherichia coli strain AR_0162, complete genome	8	3201077-3201221	8	CRISPRCasFinder	no		PD-DExK,RT,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,c2c9_V-U4	Orphan	TTTTGCAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCAT	43	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,RT,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,c2c9_V-U4	NA,NA|28aa|down_2|NZ_CP021683.1_3203266_3203350_-	NA|357aa|up_9|NZ_CP021683.1_3186215_3187286_-	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional	NA|194aa|up_8|NZ_CP021683.1_3187378_3187960_+	PRK10045, PRK10045, ACP phosphodiesterase	NA|606aa|up_7|NZ_CP021683.1_3187964_3189782_-	PRK10785, PRK10785, maltodextrin glucosidase; Provisional	NA|458aa|up_6|NZ_CP021683.1_3189937_3191311_-	PRK10580, proY, putative proline-specific permease; Provisional	NA|440aa|up_5|NZ_CP021683.1_3191386_3192706_-	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ	NA|432aa|up_4|NZ_CP021683.1_3193112_3194408_-	PRK11006, phoR, phosphate regulon sensor histidine kinase PhoR	NA|230aa|up_3|NZ_CP021683.1_3194465_3195155_-	PRK10161, PRK10161, phosphate response regulator transcription factor PhoB	NA|401aa|up_2|NZ_CP021683.1_3195344_3196547_+	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional	NA|1049aa|up_1|NZ_CP021683.1_3196543_3199690_+	PRK10246, PRK10246, exonuclease subunit SbcC; Provisional	NA|395aa|up_0|NZ_CP021683.1_3199815_3201000_+	PRK10091, PRK10091, MFS transport protein AraJ; Provisional	NA|303aa|down_0|NZ_CP021683.1_3201244_3202153_-	PRK09557, PRK09557, fructokinase; Reviewed	NA|304aa|down_1|NZ_CP021683.1_3202277_3203189_+	COG2974, RdgC, DNA recombination-dependent growth factor C [DNA replication, recombination, and repair]	NA|28aa|down_2|NZ_CP021683.1_3203266_3203350_-	NA	NA|95aa|down_3|NZ_CP021683.1_3203835_3204120_-	PRK10579, PRK10579, pyrimidine/purine nucleoside phosphorylase	NA|226aa|down_4|NZ_CP021683.1_3204191_3204869_-	PRK10481, PRK10481, hypothetical protein; Provisional	NA|64aa|down_5|NZ_CP021683.1_3205126_3205318_-	PRK10380, PRK10380, hypothetical protein; Provisional	NA|175aa|down_6|NZ_CP021683.1_3205367_3205892_-	PRK03731, aroL, shikimate kinase AroL	NA|121aa|down_7|NZ_CP021683.1_3206074_3206437_-	PRK00124, PRK00124, YaiI/YqxD family protein	NA|270aa|down_8|NZ_CP021683.1_3206564_3207374_+	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed	NA|372aa|down_9|NZ_CP021683.1_3207390_3208506_-	PRK10245, adrA, diguanylate cyclase AdrA; Provisional
GCF_002180135.1_ASM218013v1	NZ_CP021683	Escherichia coli strain AR_0162, complete genome	9	3840343-3840492	9	CRISPRCasFinder	no	RT	PD-DExK,RT,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,c2c9_V-U4	Unclear	TGAACGCCTTATCCGACCTACACAGCACTGAACTCGTAGGCCTGATAAGACGCG	54	0	0	NA	NA	NA	1	1	Orphan	PD-DExK,RT,WYL,cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG,c2c9_V-U4	NA|120aa|up_9|NZ_CP021683.1_3829555_3829915_-,NA|195aa|up_8|NZ_CP021683.1_3829907_3830492_-,NA|213aa|up_6|NZ_CP021683.1_3831160_3831799_-,NA	NA|120aa|up_9|NZ_CP021683.1_3829555_3829915_-	NA	NA|195aa|up_8|NZ_CP021683.1_3829907_3830492_-	NA	NA|77aa|up_7|NZ_CP021683.1_3830553_3830784_-	COG3311, AlpA, Predicted transcriptional regulator [Transcription]	NA|213aa|up_6|NZ_CP021683.1_3831160_3831799_-	NA	NA|421aa|up_5|NZ_CP021683.1_3831828_3833091_-	PRK09692, PRK09692, integrase; Provisional	NA|340aa|up_4|NZ_CP021683.1_3833535_3834555_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|501aa|up_3|NZ_CP021683.1_3834682_3836185_+	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|361aa|up_2|NZ_CP021683.1_3836345_3837428_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|367aa|up_1|NZ_CP021683.1_3837427_3838528_-	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|504aa|up_0|NZ_CP021683.1_3838794_3840306_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|148aa|down_0|NZ_CP021683.1_3840659_3841103_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|down_1|NZ_CP021683.1_3841102_3843958_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|396aa|down_2|NZ_CP021683.1_3844009_3845197_-	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|168aa|down_3|NZ_CP021683.1_3845389_3845893_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|139aa|down_4|NZ_CP021683.1_3845938_3846355_-	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|335aa|down_5|NZ_CP021683.1_3846516_3847521_+	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|151aa|down_6|NZ_CP021683.1_3849443_3849896_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|198aa|down_7|NZ_CP021683.1_3850040_3850634_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|238aa|down_8|NZ_CP021683.1_3850704_3851418_+	PRK12742, PRK12742, SDR family oxidoreductase	NA|132aa|down_9|NZ_CP021683.1_3851548_3851944_+	cd02198, YjgH_like, YjgH belongs to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function
