assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002162015.1_ASM216201v1	NZ_CP021448	Ralstonia solanacearum strain SEPPX05 chromosome, complete genome	1	522605-522715	1	CRISPRCasFinder	no		WYL,cas3,DinG,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	GCGGACGGCTCGGGACGAATATAGGGA	27	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DinG,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA	NA|178aa|up_9|NZ_CP021448.1_510732_511266_-	TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase	NA|244aa|up_8|NZ_CP021448.1_511262_511994_-	TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenosine modification protein YeaZ	NA|90aa|up_7|NZ_CP021448.1_512146_512416_+	COG4281, ACB, Acyl-CoA-binding protein [Lipid metabolism]	NA|488aa|up_6|NZ_CP021448.1_512467_513931_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|157aa|up_5|NZ_CP021448.1_514027_514498_-	cd08863, SRPBCC_DUF1857, DUF1857, an uncharacterized ligand-binding domain of the SRPBCC domain superfamily	NA|527aa|up_4|NZ_CP021448.1_514604_516185_-	PRK09255, PRK09255, malate synthase; Validated	NA|234aa|up_3|NZ_CP021448.1_516269_516971_-	TIGR01428, Haloacetate_dehalogenase, 2-haloalkanoic acid dehalogenase, type II	NA|310aa|up_2|NZ_CP021448.1_517427_518357_+	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|145aa|up_1|NZ_CP021448.1_518433_518868_+	pfam00582, Usp, Universal stress protein family	NA|435aa|up_0|NZ_CP021448.1_518999_520304_-	PRK15063, PRK15063, isocitrate lyase; Provisional	NA|622aa|down_0|NZ_CP021448.1_523149_525015_-	sd00033, LRR_RI, leucine-rich repeats, ribonuclease inhibitor (RI)-like subfamily	NA|138aa|down_1|NZ_CP021448.1_525192_525606_-	COG2105, COG2105, Uncharacterized conserved protein [Function unknown]	NA|169aa|down_2|NZ_CP021448.1_525598_526105_-	PRK09372, PRK09372, ribonuclease E inhibitor RraA	NA|579aa|down_3|NZ_CP021448.1_526132_527869_-	PRK08199, PRK08199, thiamine pyrophosphate protein; Validated	NA|271aa|down_4|NZ_CP021448.1_527953_528766_-	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms]	NA|415aa|down_5|NZ_CP021448.1_528769_530014_-	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|98aa|down_6|NZ_CP021448.1_530013_530307_-	pfam13239, 2TM, 2TM domain	NA|686aa|down_7|NZ_CP021448.1_530504_532562_-	pfam14496, NEL, C-terminal novel E3 ligase, LRR-interacting	NA|328aa|down_8|NZ_CP021448.1_532710_533694_-	PRK12683, PRK12683, transcriptional regulator CysB-like protein; Reviewed	NA|373aa|down_9|NZ_CP021448.1_533728_534847_-	cd03296, ABC_CysA_sulfate_importer, ATP-binding cassette domain of the sulfate transporter
GCF_002162015.1_ASM216201v1	NZ_CP021448	Ralstonia solanacearum strain SEPPX05 chromosome, complete genome	2	3715554-3716803	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	WYL,cas3,DinG,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-E	CGGTTCATCCCCGCATACGCGGGGAACAC,CGGTTCATCCCCGCATACGCGGGGAACAC,CGGTTCATCCCCGCATACGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	20,19,15	20	TypeI-E	WYL,cas3,DinG,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA|740aa|up_4|NZ_CP021448.1_3709169_3711389_-,NA	NA|176aa|up_9|NZ_CP021448.1_3701162_3701690_+	COG3658, COG3658, Cytochrome b [Energy production and conversion]	NA|398aa|up_8|NZ_CP021448.1_3701731_3702925_-	COG3071, HemY, Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism]	NA|694aa|up_7|NZ_CP021448.1_3702927_3705009_-	PRK06975, PRK06975, bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; Reviewed	NA|335aa|up_6|NZ_CP021448.1_3705023_3706028_-	PRK00072, hemC, porphobilinogen deaminase; Reviewed	NA|986aa|up_5|NZ_CP021448.1_3706136_3709094_+	PRK00009, PRK00009, phosphoenolpyruvate carboxylase; Reviewed	NA|740aa|up_4|NZ_CP021448.1_3709169_3711389_-	NA	NA|204aa|up_3|NZ_CP021448.1_3711851_3712463_-	pfam13668, Ferritin_2, Ferritin-like domain	NA|214aa|up_2|NZ_CP021448.1_3712644_3713286_+	PRK12514, PRK12514, RNA polymerase sigma factor; Provisional	NA|240aa|up_1|NZ_CP021448.1_3713285_3714005_+	COG5343, COG5343, Uncharacterized protein conserved in bacteria [Function unknown]	NA|472aa|up_0|NZ_CP021448.1_3714114_3715530_+	PRK00855, PRK00855, argininosuccinate lyase; Provisional	cas2|100aa|down_0|NZ_CP021448.1_3716871_3717171_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|297aa|down_1|NZ_CP021448.1_3717167_3718058_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|223aa|down_2|NZ_CP021448.1_3718089_3718758_-	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	cas5|258aa|down_3|NZ_CP021448.1_3718754_3719528_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|345aa|down_4|NZ_CP021448.1_3719532_3720567_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|200aa|down_5|NZ_CP021448.1_3720587_3721187_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|523aa|down_6|NZ_CP021448.1_3721183_3722752_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|913aa|down_7|NZ_CP021448.1_3723233_3725972_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|760aa|down_8|NZ_CP021448.1_3726483_3728763_-	COG1982, LdcC, Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]	NA|189aa|down_9|NZ_CP021448.1_3728826_3729393_-	PRK00416, dcd, deoxycytidine triphosphate deaminase; Reviewed
GCF_002162015.1_ASM216201v1	NZ_CP021448	Ralstonia solanacearum strain SEPPX05 chromosome, complete genome	3	3726184-3726396	3,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	WYL,cas3,DinG,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-E	CGGTTCATCCCCGCACACGCGGGGAACAC,CGGTTCATCCCCGCACACGCGGGGAACAC,CGGTTCATCCCCGCACACGCGGGGAACACA	29,29,30	0	0	NA	NA	I-E:I-E:I-E	3,3,2	3	TypeI-E	WYL,cas3,DinG,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA|111aa|down_4|NZ_CP021448.1_3731158_3731491_-,NA|81aa|down_6|NZ_CP021448.1_3732694_3732937_-	NA|240aa|up_9|NZ_CP021448.1_3713285_3714005_+	COG5343, COG5343, Uncharacterized protein conserved in bacteria [Function unknown]	NA|472aa|up_8|NZ_CP021448.1_3714114_3715530_+	PRK00855, PRK00855, argininosuccinate lyase; Provisional	cas2|100aa|up_7|NZ_CP021448.1_3716871_3717171_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|297aa|up_6|NZ_CP021448.1_3717167_3718058_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|223aa|up_5|NZ_CP021448.1_3718089_3718758_-	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions	cas5|258aa|up_4|NZ_CP021448.1_3718754_3719528_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|345aa|up_3|NZ_CP021448.1_3719532_3720567_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|200aa|up_2|NZ_CP021448.1_3720587_3721187_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|523aa|up_1|NZ_CP021448.1_3721183_3722752_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|913aa|up_0|NZ_CP021448.1_3723233_3725972_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|760aa|down_0|NZ_CP021448.1_3726483_3728763_-	COG1982, LdcC, Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]	NA|189aa|down_1|NZ_CP021448.1_3728826_3729393_-	PRK00416, dcd, deoxycytidine triphosphate deaminase; Reviewed	NA|292aa|down_2|NZ_CP021448.1_3729561_3730437_-	pfam02634, FdhD-NarQ, FdhD/NarQ family	NA|183aa|down_3|NZ_CP021448.1_3730531_3731080_-	pfam00080, Sod_Cu, Copper/zinc superoxide dismutase (SODC)	NA|111aa|down_4|NZ_CP021448.1_3731158_3731491_-	NA	NA|385aa|down_5|NZ_CP021448.1_3731516_3732671_-	COG2864, FdnI, Cytochrome b subunit of formate dehydrogenase [Energy production and conversion]	NA|81aa|down_6|NZ_CP021448.1_3732694_3732937_-	NA	NA|232aa|down_7|NZ_CP021448.1_3732939_3733635_-	cd16371, DMSOR_beta_like, uncharacterized subfamily of DMSO Reductase beta subunit family	NA|1000aa|down_8|NZ_CP021448.1_3733650_3736650_-	cd02752, MopB_Formate-Dh-Na-like, Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a major component of nitrate respiration in bacteria such as in the E	NA|86aa|down_9|NZ_CP021448.1_3736704_3736962_-	TIGR02811, formate_dehydrogenase_accessory_protein_FdhX, formate dehydrogenase region TAT target
GCF_002162015.1_ASM216201v1	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1	154394-154488	1	CRISPRCasFinder	no		WYL,csa3	Orphan	ACGACGGGCAGCACGGGCAGCGG	23	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,DinG,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA|136aa|up_0|NZ_CP021449.1_153235_153643_+,NA|68aa|down_0|NZ_CP021449.1_155861_156065_+,NA|115aa|down_7|NZ_CP021449.1_164838_165183_+	NA|339aa|up_9|NZ_CP021449.1_141926_142943_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|263aa|up_8|NZ_CP021449.1_142939_143728_+	PRK09183, PRK09183, transposase/IS protein; Provisional	NA|217aa|up_7|NZ_CP021449.1_144501_145152_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|322aa|up_6|NZ_CP021449.1_145256_146222_+	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|347aa|up_5|NZ_CP021449.1_146241_147282_+	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only]	NA|682aa|up_4|NZ_CP021449.1_147278_149324_+	pfam11992, DUF3488, Domain of unknown function (DUF3488)	NA|215aa|up_3|NZ_CP021449.1_149804_150449_+	cd00883, beta_CA_cladeA, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site	NA|521aa|up_2|NZ_CP021449.1_150569_152132_+	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	NA|261aa|up_1|NZ_CP021449.1_152399_153182_+	COG4705, COG4705, Uncharacterized membrane-anchored protein conserved in bacteria [Function unknown]	NA|136aa|up_0|NZ_CP021449.1_153235_153643_+	NA	NA|68aa|down_0|NZ_CP021449.1_155861_156065_+	NA	NA|128aa|down_1|NZ_CP021449.1_156149_156533_+	pfam08956, DUF1869, Domain of unknown function (DUF1869)	NA|397aa|down_2|NZ_CP021449.1_156661_157852_-	TIGR02334, conserved_hypothetical_protein, probable AcnD-accessory protein PrpF	NA|866aa|down_3|NZ_CP021449.1_157848_160446_-	TIGR02333, 2-methyl_citrate_dehydratase_Fe-S_dependent_AcnD, 2-methylisocitrate dehydratase, Fe/S-dependent	NA|388aa|down_4|NZ_CP021449.1_160534_161698_-	PRK12351, PRK12351, methylcitrate synthase; Provisional	NA|299aa|down_5|NZ_CP021449.1_161749_162646_-	PRK11320, prpB, 2-methylisocitrate lyase; Provisional	NA|650aa|down_6|NZ_CP021449.1_162838_164788_+	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]	NA|115aa|down_7|NZ_CP021449.1_164838_165183_+	NA	NA|104aa|down_8|NZ_CP021449.1_165179_165491_+	COG2944, COG2944, Predicted transcriptional regulator [Transcription]	NA|270aa|down_9|NZ_CP021449.1_165630_166440_-	pfam10001, DUF2242, Uncharacterized protein conserved in bacteria (DUF2242)
GCF_002162015.1_ASM216201v1	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	2	1370558-1371087	2,1	CRISPRCasFinder,PILER-CR	no		WYL,csa3	Orphan	TTGGCAGCCAGTGCCTGCGCGCCCGC,GGTGAGCGAAGTGTTGGCAGCCAGTGCTTGCGCGCCCGC	26,39	0	0	NA	NA	NA:NA	7,2	7	Orphan	WYL,cas3,DinG,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA|264aa|down_8|NZ_CP021449.1_1382238_1383030_+	NA|216aa|up_9|NZ_CP021449.1_1354863_1355511_-	sd00006, TPR, Tetratricopeptide repeat	NA|225aa|up_8|NZ_CP021449.1_1355785_1356460_+	COG3521, COG3521, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and    vesicular transport]	NA|449aa|up_7|NZ_CP021449.1_1356503_1357850_+	COG3522, COG3522, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and    vesicular transport]	NA|264aa|up_6|NZ_CP021449.1_1357846_1358638_+	COG3455, COG3455, Type VI protein secretion system component VasF [Intracellular    trafficking, secretion, and vesicular transport]	NA|901aa|up_5|NZ_CP021449.1_1358696_1361399_+	COG3501, VgrG, Uncharacterized protein conserved in bacteria [Function unknown]	NA|263aa|up_4|NZ_CP021449.1_1364122_1364911_-	PRK09183, PRK09183, transposase/IS protein; Provisional	NA|339aa|up_3|NZ_CP021449.1_1364907_1365924_-	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|290aa|up_2|NZ_CP021449.1_1367839_1368709_-	cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs	NA|221aa|up_1|NZ_CP021449.1_1368750_1369413_-	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs	NA|190aa|up_0|NZ_CP021449.1_1369464_1370034_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|369aa|down_0|NZ_CP021449.1_1372481_1373588_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|314aa|down_1|NZ_CP021449.1_1373885_1374827_+	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|398aa|down_2|NZ_CP021449.1_1374908_1376102_-	PRK07236, PRK07236, hypothetical protein; Provisional	NA|412aa|down_3|NZ_CP021449.1_1377025_1378260_-	PRK09409, PRK09409, IS2 transposase TnpB; Reviewed	NA|223aa|down_4|NZ_CP021449.1_1378607_1379276_+	COG2761, FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|305aa|down_5|NZ_CP021449.1_1379352_1380267_+	TIGR03571, lucif_BA3436, luciferase-type oxidoreductase, BA3436 family	NA|128aa|down_6|NZ_CP021449.1_1380370_1380754_+	cd02237, cupin_DAD_ChrR, 2,4'-Dihydroxyacetophenone dioxygenase (DAD) and anti-sigma factor ChrR, and similar proteins; cupin domain	NA|338aa|down_7|NZ_CP021449.1_1381162_1382176_+	cd11010, S1-P1_nuclease, S1/P1 nucleases and related enzymes	NA|264aa|down_8|NZ_CP021449.1_1382238_1383030_+	NA	NA|648aa|down_9|NZ_CP021449.1_1383049_1384993_+	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]
