The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP021359	Acidovorax carolinensis strain NA2 chromosome, complete genome	3986972	1767075	1810265	3986972	terminase,capsid,plate,portal,transposase,tail,protease,head	uncultured_Caudovirales_phage(41.18%)	54	NA	NA
WP_086914041.1|1767075_1767309_+|terminase	terminase	terminase	NA	NA	NA	NA
WP_086912144.1|1767305_1767776_+	hypothetical protein	NA	K4HZ96	Acidithiobacillus_phage	43.7	1.7e-29
WP_086912145.1|1767781_1768096_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086912146.1|1768092_1768968_+	ATP-binding protein	NA	K4HZX9	Acidithiobacillus_phage	68.4	2.8e-105
WP_086912147.1|1768970_1769576_+	hypothetical protein	NA	K4ICM8	Acidithiobacillus_phage	60.1	1.2e-62
WP_086912148.1|1769589_1771266_+	DEAD/DEAH box helicase	NA	A0A1B1IW48	uncultured_Mediterranean_phage	29.4	1.3e-37
WP_086912149.1|1771262_1771685_+	hypothetical protein	NA	K4I3X7	Acidithiobacillus_phage	48.8	1.2e-24
WP_086912150.1|1771684_1772440_+	hypothetical protein	NA	K4HZA0	Acidithiobacillus_phage	59.0	5.4e-81
WP_086914042.1|1772439_1774629_+	AAA family ATPase	NA	A0A1B2LRQ1	Wolbachia_phage	33.2	6.1e-101
WP_086912151.1|1774940_1775396_+	hypothetical protein	NA	K4ICN3	Acidithiobacillus_phage	71.0	1.7e-53
WP_086912152.1|1775398_1775602_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086912153.1|1775594_1775981_+	RNA polymerase subunit sigma	NA	NA	NA	NA	NA
WP_086912154.1|1776175_1777474_+	site-specific DNA-methyltransferase	NA	A0A2H4JGF1	uncultured_Caudovirales_phage	68.2	3.2e-158
WP_086912155.1|1777583_1778705_+	Fic family protein	NA	NA	NA	NA	NA
WP_086912156.1|1778727_1779180_-	DUF3489 domain-containing protein	NA	A0A2H4JE21	uncultured_Caudovirales_phage	67.9	2.0e-22
WP_086912157.1|1779220_1779442_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086912158.1|1779488_1779695_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086912159.1|1780050_1780578_+	hypothetical protein	NA	A0A2K9V2Q9	Faecalibacterium_phage	29.4	4.7e-07
WP_157896561.1|1780555_1782403_+|terminase	phage terminase large subunit family protein	terminase	A0A2K9V3X4	Faecalibacterium_phage	45.8	4.8e-131
WP_086912161.1|1782421_1782628_+	hypothetical protein	NA	A0A2H4JA19	uncultured_Caudovirales_phage	52.2	5.5e-12
WP_086912162.1|1782630_1784148_+|portal	phage portal protein	portal	A0A2H4JFL5	uncultured_Caudovirales_phage	67.2	4.9e-190
WP_086912163.1|1784144_1785281_+|protease	Clp protease ClpP	protease	A0A2H4JDI2	uncultured_Caudovirales_phage	45.3	1.9e-82
WP_086912164.1|1785301_1785646_+|head	head decoration protein	head	NA	NA	NA	NA
WP_086912165.1|1785677_1786682_+|capsid	major capsid protein	capsid	A0A2H4J890	uncultured_Caudovirales_phage	49.4	1.2e-83
WP_086912166.1|1786692_1786992_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086912167.1|1786988_1787522_+|tail	phage tail protein	tail	A0A2H4JBV1	uncultured_Caudovirales_phage	30.6	2.7e-10
WP_086912168.1|1787535_1788051_+	hypothetical protein	NA	Q9JML9	Wolbachia_phage	44.4	6.8e-27
WP_086912169.1|1788047_1788698_+|plate	phage baseplate assembly protein V	plate	A0A2H4JG06	uncultured_Caudovirales_phage	43.9	6.8e-24
WP_086912170.1|1788770_1789019_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086914043.1|1789028_1789355_+|plate	phage baseplate protein	plate	A0A2H4JA09	uncultured_Caudovirales_phage	56.6	2.3e-28
WP_086912171.1|1789351_1790236_+|plate	baseplate assembly protein	plate	A0A1S6KZY6	Salmonella_phage	61.7	2.7e-92
WP_086912172.1|1790228_1790852_+|tail	phage tail protein I	tail	F1BUP2	Erwinia_phage	57.4	2.5e-60
WP_086912173.1|1790848_1792084_+	hypothetical protein	NA	A0A2I8TVA9	Erwinia_phage	41.4	1.5e-64
WP_086912174.1|1792092_1792842_+|tail	phage tail protein	tail	A0A077K9S5	Ralstonia_phage	53.4	4.2e-62
WP_086912175.1|1792913_1794074_+|tail	phage tail sheath family protein	tail	A0A2H4J869	uncultured_Caudovirales_phage	74.7	1.9e-162
WP_086912176.1|1794086_1794590_+|tail	phage major tail tube protein	tail	Q7M2A5	Pseudomonas_phage	55.2	3.6e-49
WP_086912177.1|1794642_1794966_+|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_086912178.1|1795015_1797445_+|tail	phage tail protein	tail	A0A2H4JG00	uncultured_Caudovirales_phage	54.4	3.3e-07
WP_086912179.1|1797453_1798371_+|tail	phage tail protein	tail	A0A2H4J875	uncultured_Caudovirales_phage	32.1	5.1e-25
WP_086914044.1|1798357_1798552_+|tail	phage tail protein	tail	A0A2H4IYW8	uncultured_Caudovirales_phage	56.5	4.2e-14
WP_086912180.1|1798555_1799608_+	late control protein	NA	A0A2H4JBF6	uncultured_Caudovirales_phage	50.3	7.7e-86
WP_086914045.1|1799673_1799961_+	hypothetical protein	NA	K4I011	Acidithiobacillus_phage	46.4	4.8e-14
WP_086914046.1|1800080_1800425_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086912181.1|1800424_1800922_+	lysozyme	NA	A0A142EZW8	Stenotrophomonas_phage	44.4	8.0e-25
WP_086914047.1|1801036_1802008_+	glycosyltransferase family 2 protein	NA	A0A075B8F6	Enterobacteria_phage	55.1	1.6e-93
WP_086912182.1|1802011_1802728_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_157896562.1|1802744_1803245_+	GtrA family protein	NA	NA	NA	NA	NA
WP_157896563.1|1803241_1805290_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086914048.1|1805394_1805616_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086912185.1|1806270_1806537_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_086912186.1|1806533_1807841_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_086912187.1|1807887_1808106_-	hypothetical protein	NA	A0A291LAT3	Bordetella_phage	35.8	7.3e-07
WP_157896621.1|1809006_1809090_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063462293.1|1809179_1810265_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP021359	Acidovorax carolinensis strain NA2 chromosome, complete genome	3986972	2406479	2472083	3986972	terminase,capsid,tRNA,portal,integrase,protease,head	uncultured_Caudovirales_phage(12.5%)	57	2411725:2411741	2469692:2469708
WP_086914100.1|2406479_2407472_-|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_086912635.1|2407557_2407929_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_086912636.1|2407932_2410794_-	translation initiation factor IF-2	NA	E3T4N3	Cafeteria_roenbergensis_virus	24.8	3.7e-21
WP_086912637.1|2410817_2412302_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
2411725:2411741	attL	CGCAGCGTCAGGTCCAC	NA	NA	NA	NA
WP_086912638.1|2412379_2412973_-	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_086912639.1|2413284_2416635_-	DEAD/DEAH box helicase	NA	A0A0N7D8L3	Dasychira_pudibunda_nucleopolyhedrovirus	30.5	2.0e-50
WP_086912640.1|2416826_2417228_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_086912641.1|2417287_2418580_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_157896623.1|2418593_2419232_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_086912643.1|2419638_2421378_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	32.0	1.0e-18
WP_086914101.1|2421603_2422113_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086912644.1|2422302_2423775_-	RNB domain-containing ribonuclease	NA	NA	NA	NA	NA
WP_086912645.1|2423801_2425094_-	MFS transporter	NA	NA	NA	NA	NA
WP_086912646.1|2425291_2425918_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_086914102.1|2425976_2428607_+	cation-translocating P-type ATPase	NA	M1IAU8	Acanthocystis_turfacea_Chlorella_virus	28.8	3.8e-57
WP_086912647.1|2428620_2429586_-	cation transporter	NA	NA	NA	NA	NA
WP_086912648.1|2429723_2430773_-	DMT family transporter	NA	NA	NA	NA	NA
WP_086912649.1|2431171_2432341_-	DUF4382 domain-containing protein	NA	NA	NA	NA	NA
WP_086912650.1|2432670_2433294_+	PEP-CTERM sorting domain-containing protein	NA	NA	NA	NA	NA
WP_086912651.1|2433546_2434746_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086912652.1|2434817_2435636_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086912653.1|2435875_2436283_+	type IV pilin protein	NA	NA	NA	NA	NA
WP_086914103.1|2436295_2436787_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_086912654.1|2436774_2437347_+	type IV pilus modification protein PilV	NA	NA	NA	NA	NA
WP_086912655.1|2437364_2438384_+	PilW family protein	NA	NA	NA	NA	NA
WP_086912656.1|2438380_2438944_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086912657.1|2438967_2441970_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086912658.1|2442366_2443998_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.8	2.4e-17
WP_086914104.1|2443994_2445062_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_086912659.1|2445072_2445489_-	DUF86 domain-containing protein	NA	NA	NA	NA	NA
WP_086912660.1|2445478_2445889_-	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_086912661.1|2445898_2446930_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_086912662.1|2446946_2448773_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_086912663.1|2449053_2449854_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_086912664.1|2449937_2450789_+	DNA ligase	NA	F2Y2Y2	Organic_Lake_phycodnavirus	30.6	5.4e-29
WP_086912665.1|2450953_2453320_-	arginine/lysine/ornithine decarboxylase	NA	NA	NA	NA	NA
WP_086912666.1|2453463_2453889_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086912667.1|2453925_2454840_+	paraslipin	NA	NA	NA	NA	NA
WP_086912668.1|2455212_2456412_+|integrase	tyrosine-type recombinase/integrase	integrase	B7SYF8	Stenotrophomonas_phage	47.8	2.3e-94
WP_157896581.1|2456398_2457130_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086912670.1|2457237_2457486_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_086912671.1|2457485_2458196_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086912672.1|2458199_2458517_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086912673.1|2458506_2458812_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086912674.1|2458801_2459260_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086912675.1|2459256_2460477_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_086912676.1|2460619_2461843_+|capsid	phage major capsid protein	capsid	R9TPU0	Vibrio_phage	28.6	5.0e-28
WP_086912677.1|2461857_2462382_+|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4J6Z9	uncultured_Caudovirales_phage	45.7	4.8e-28
WP_086912678.1|2462390_2463560_+|portal	phage portal protein	portal	A0A2K5B287	Erysipelothrix_phage	43.6	6.4e-73
WP_157896582.1|2463537_2463993_+	HNH endonuclease	NA	A0A2D1GNP5	Pseudomonas_phage	47.0	2.8e-08
WP_086912679.1|2463989_2464472_+	TerS protein	NA	A0A0F7L441	uncultured_marine_virus	47.0	8.3e-27
WP_086912680.1|2464475_2465996_+|terminase	terminase large subunit	terminase	F1C585	Cronobacter_phage	63.1	3.9e-179
WP_086912681.1|2466422_2466755_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086912682.1|2466858_2467842_+	DUF932 domain-containing protein	NA	A0A0H4INH5	Stenotrophomonas_phage	40.1	2.5e-54
WP_086914105.1|2467985_2468996_+	YqaJ viral recombinase family protein	NA	A6XMH8	Bacillus_virus	36.9	1.3e-50
WP_086914106.1|2469076_2470009_+|capsid	phage capsid protein	capsid	NA	NA	NA	NA
2469692:2469708	attR	GTGGACCTGACGCTGCG	NA	NA	NA	NA
WP_086912683.1|2470466_2472083_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	1.4e-17
>prophage 1
NZ_CP021360	Acidovorax carolinensis strain NA2 plasmid pACNA2.1, complete sequence	71051	166	28083	71051	integrase,transposase	Burkholderia_phage(33.33%)	25	14438:14452	29123:29137
WP_086914301.1|166_823_+|transposase	heteromeric transposase endonuclease subunit TnsA	transposase	NA	NA	NA	NA
WP_086914268.1|800_2750_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	NA	NA	NA	NA
WP_086914269.1|2749_3646_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_157896629.1|3632_4586_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086928897.1|5197_6181_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157896630.1|6184_7831_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157896774.1|8551_9286_-	hypothetical protein	NA	NA	NA	NA	NA
WP_063462293.1|9401_10487_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_086914275.1|11536_11905_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086914276.1|12555_12792_+	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
WP_086914277.1|12834_13296_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_056057356.1|13444_13756_-	HU family DNA-binding protein	NA	Q6QIE5	Burkholderia_phage	44.9	4.4e-13
WP_086914278.1|13826_14642_-	DNA/RNA non-specific endonuclease	NA	H6X497	Enterobacteria_phage	33.7	3.7e-19
14438:14452	attL	TGGCGGGTGGGTTGC	NA	NA	NA	NA
WP_008903080.1|15469_15913_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_008903079.1|15888_16239_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_082759088.1|16340_17936_+|transposase	IS66 family transposase	transposase	S5VTD3	Leptospira_phage	36.9	4.5e-77
WP_034692674.1|17969_18683_-	UPF0149 family protein	NA	NA	NA	NA	NA
WP_086914279.1|19529_19799_-	flagellar biosynthesis protein FliQ	NA	NA	NA	NA	NA
WP_086914280.1|19879_21127_-	TolC family protein	NA	NA	NA	NA	NA
WP_086914281.1|21123_21426_-	DUF3240 family protein	NA	NA	NA	NA	NA
WP_086914282.1|21418_24523_-	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	24.3	2.5e-79
WP_086914283.1|24524_25658_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_157896632.1|25813_26032_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086914285.1|26370_27345_-|transposase	IS5 family transposase	transposase	E5E3P6	Burkholderia_phage	49.4	2.6e-80
WP_024814084.1|27459_28083_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5SFD7	Streptococcus_phage	31.0	1.3e-11
29123:29137	attR	TGGCGGGTGGGTTGC	NA	NA	NA	NA
