assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002148195.1_ASM214819v1	NZ_CP015965	Mycobacterium intracellulare subsp. yongonense strain Asan 36527 chromosome, complete genome	1	2133676-2133741	1	CRISPRCasFinder	no		csa3,DEDDh,cas3,DinG,cas4,WYL,c2c9_V-U4,PrimPol	Orphan	GCAGCCGGGCGCAGCGGGTCGCC	23	1	1	2133699-2133718	NZ_CP015965.1_2133732-2133751	NA	1	1	Orphan	csa3,DEDDh,cas3,DinG,cas4,WYL,c2c9_V-U4,PrimPol	NA|299aa|up_4|NZ_CP015965.1_2129491_2130388_+,NA|217aa|up_3|NZ_CP015965.1_2130398_2131049_-,NA	NA|463aa|up_9|NZ_CP015965.1_2123393_2124782_+	pfam01474, DAHP_synth_2, Class-II DAHP synthetase family	NA|406aa|up_8|NZ_CP015965.1_2124860_2126078_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|135aa|up_7|NZ_CP015965.1_2126230_2126635_+	pfam18367, Rv2175c_C, Rv2175c C-terminal domain of unknown function	NA|516aa|up_6|NZ_CP015965.1_2126628_2128176_-	TIGR03459, crt_membr, carotene biosynthesis associated membrane protein	NA|350aa|up_5|NZ_CP015965.1_2128180_2129230_-	cd00685, Trans_IPPS_HT, Trans-Isoprenyl Diphosphate Synthases, head-to-tail	NA|299aa|up_4|NZ_CP015965.1_2129491_2130388_+	NA	NA|217aa|up_3|NZ_CP015965.1_2130398_2131049_-	NA	NA|203aa|up_2|NZ_CP015965.1_2131215_2131824_-	COG0456, RimI, Acetyltransferases [General function prediction only]	NA|135aa|up_1|NZ_CP015965.1_2132150_2132555_+	pfam11239, DUF3040, Protein of unknown function (DUF3040)	NA|144aa|up_0|NZ_CP015965.1_2132994_2133426_+	COG2001, COG2001, Uncharacterized protein conserved in bacteria [Function unknown]	NA|326aa|down_0|NZ_CP015965.1_2133796_2134774_+	COG0275, COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis [Cell envelope biogenesis, outer membrane]	NA|417aa|down_1|NZ_CP015965.1_2134773_2136024_+	PHA03247, PHA03247, large tegument protein UL36; Provisional	NA|692aa|down_2|NZ_CP015965.1_2136020_2138096_+	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane]	NA|377aa|down_3|NZ_CP015965.1_2138147_2139278_-	PRK07588, PRK07588, FAD-binding domain	NA|186aa|down_4|NZ_CP015965.1_2139389_2139947_+	pfam16859, TetR_C_11, Bacterial transcriptional repressor C-terminal	NA|523aa|down_5|NZ_CP015965.1_2140012_2141581_+	PRK00139, murE, UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; Provisional	NA|516aa|down_6|NZ_CP015965.1_2141577_2143125_+	COG0770, MurF, UDP-N-acetylmuramyl pentapeptide synthase [Cell envelope biogenesis, outer membrane]	NA|360aa|down_7|NZ_CP015965.1_2143121_2144201_+	PRK00108, mraY, phospho-N-acetylmuramoyl-pentapeptide-transferase; Provisional	NA|486aa|down_8|NZ_CP015965.1_2144200_2145658_+	PRK03369, murD, UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA|566aa|down_9|NZ_CP015965.1_2145666_2147364_+	TIGR02614, Putative_lipid_II_flippase_FtsW, cell division protein FtsW
GCF_002148195.1_ASM214819v1	NZ_CP015965	Mycobacterium intracellulare subsp. yongonense strain Asan 36527 chromosome, complete genome	2	2670218-2670312	2	CRISPRCasFinder	no		csa3,DEDDh,cas3,DinG,cas4,WYL,c2c9_V-U4,PrimPol	Orphan	CGCCGCGCCGCGTGCGCTCCGGCGC	25	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,DinG,cas4,WYL,c2c9_V-U4,PrimPol	NA,NA|226aa|down_3|NZ_CP015965.1_2673727_2674405_-	NA|250aa|up_9|NZ_CP015965.1_2659410_2660160_-	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|161aa|up_8|NZ_CP015965.1_2660159_2660642_-	COG1716, COG1716, FOG: FHA domain [Signal transduction mechanisms]	NA|133aa|up_7|NZ_CP015965.1_2660871_2661270_-	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|271aa|up_6|NZ_CP015965.1_2661297_2662110_-	COG3879, COG3879, Uncharacterized protein conserved in bacteria [Function unknown]	NA|111aa|up_5|NZ_CP015965.1_2662185_2662518_-	COG3856, Sbp, Uncharacterized conserved protein (small basic protein) [Function unknown]	NA|304aa|up_4|NZ_CP015965.1_2662570_2663482_-	COG3879, COG3879, Uncharacterized protein conserved in bacteria [Function unknown]	NA|210aa|up_3|NZ_CP015965.1_2663474_2664104_-	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism]	NA|775aa|up_2|NZ_CP015965.1_2664198_2666523_-	PRK12326, PRK12326, preprotein translocase subunit SecA; Reviewed	NA|548aa|up_1|NZ_CP015965.1_2666560_2668204_-	PRK05858, PRK05858, acetolactate synthase	NA|640aa|up_0|NZ_CP015965.1_2668291_2670211_+	COG4178, COG4178, ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]	NA|168aa|down_0|NZ_CP015965.1_2671814_2672318_-	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|234aa|down_1|NZ_CP015965.1_2672456_2673158_-	pfam13305, WHG, WHG domain	NA|149aa|down_2|NZ_CP015965.1_2673262_2673709_+	TIGR00026, Hypothetical_protein_Rv1261c/MT1299/Mb1292c	NA|226aa|down_3|NZ_CP015965.1_2673727_2674405_-	NA	NA|298aa|down_4|NZ_CP015965.1_2674499_2675393_-	COG3000, ERG3, Sterol desaturase [Lipid metabolism]	NA|239aa|down_5|NZ_CP015965.1_2675466_2676183_-	COG1285, SapB, Uncharacterized membrane protein [Function unknown]	NA|106aa|down_6|NZ_CP015965.1_2676306_2676624_-	pfam05305, DUF732, Protein of unknown function (DUF732)	NA|464aa|down_7|NZ_CP015965.1_2676620_2678012_-	pfam00823, PPE, PPE family	NA|414aa|down_8|NZ_CP015965.1_2678177_2679419_-	pfam00823, PPE, PPE family	NA|108aa|down_9|NZ_CP015965.1_2679706_2680030_-	pfam05305, DUF732, Protein of unknown function (DUF732)
GCF_002148195.1_ASM214819v1	NZ_CP015965	Mycobacterium intracellulare subsp. yongonense strain Asan 36527 chromosome, complete genome	3	5265097-5265183	3	CRISPRCasFinder	no		csa3,DEDDh,cas3,DinG,cas4,WYL,c2c9_V-U4,PrimPol	Orphan	CGGCGCGAGTGAGGAGCCGGACAATCGTGC	30	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,DinG,cas4,WYL,c2c9_V-U4,PrimPol	NA|74aa|up_3|NZ_CP015965.1_5257092_5257314_+,NA	NA|541aa|up_9|NZ_CP015965.1_5251050_5252673_+	cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA ligase (also called cyclohex-1-ene-1-carboxylate:CoA ligase)	NA|261aa|up_8|NZ_CP015965.1_5252665_5253448_+	cd05233, SDR_c, classical (c) SDRs	NA|510aa|up_7|NZ_CP015965.1_5253432_5254962_+	cd17631, FACL_FadD13-like, fatty acyl-CoA synthetase, including FadD13	NA|381aa|up_6|NZ_CP015965.1_5254976_5256119_+	TIGR03989, Zn-dependent_alcohol_dehydrogenase_class_III, NDMA-dependent alcohol dehydrogenase, Rxyl_3153 family	NA|166aa|up_5|NZ_CP015965.1_5256096_5256594_-	cd07812, SRPBCC, START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily	NA|127aa|up_4|NZ_CP015965.1_5256668_5257049_+	pfam12680, SnoaL_2, SnoaL-like domain	NA|74aa|up_3|NZ_CP015965.1_5257092_5257314_+	NA	NA|245aa|up_2|NZ_CP015965.1_5257407_5258142_-	pfam05988, DUF899, Bacterial protein of unknown function (DUF899)	NA|256aa|up_1|NZ_CP015965.1_5258171_5258939_-	cd05233, SDR_c, classical (c) SDRs	NA|318aa|up_0|NZ_CP015965.1_5259095_5260049_+	PRK08241, PRK08241, RNA polymerase subunit sigma-70	NA|302aa|down_0|NZ_CP015965.1_5266744_5267650_-	PRK07201, PRK07201, SDR family oxidoreductase	NA|248aa|down_1|NZ_CP015965.1_5267951_5268695_+	pfam01083, Cutinase, Cutinase	NA|255aa|down_2|NZ_CP015965.1_5268776_5269541_-	COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]	NA|325aa|down_3|NZ_CP015965.1_5269687_5270662_-	pfam09995, DUF2236, Uncharacterized protein conserved in bacteria (DUF2236)	NA|202aa|down_4|NZ_CP015965.1_5270848_5271454_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|462aa|down_5|NZ_CP015965.1_5271494_5272880_+	cd07302, CHD, cyclase homology domain	NA|249aa|down_6|NZ_CP015965.1_5272977_5273724_+	PRK08317, PRK08317, hypothetical protein; Provisional	NA|151aa|down_7|NZ_CP015965.1_5273741_5274194_-	cd07825, SRPBCC_7, Ligand-binding SRPBCC domain of an uncharacterized subfamily of proteins	NA|232aa|down_8|NZ_CP015965.1_5274252_5274948_-	PRK08264, PRK08264, SDR family oxidoreductase	NA|182aa|down_9|NZ_CP015965.1_5275096_5275642_+	pfam11706, zf-CGNR, CGNR zinc finger
