assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002142715.1_ASM214271v1	NZ_CP021207	Escherichia coli strain strain Z247 chromosome, complete genome	1	4022406-4022537	1	PILER-CR	no		cas3,RT,DEDDh,DinG,c2c9_V-U4,csa3,WYL	Orphan	TTTTCAATATTGGTGAT	17	0	0	NA	NA	NA	2	2	Orphan	cas3,RT,DEDDh,DinG,c2c9_V-U4,csa3,WYL	NA|73aa|up_7|NZ_CP021207.1_4014238_4014457_-,NA	NA|383aa|up_9|NZ_CP021207.1_4009843_4010992_+	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|1074aa|up_8|NZ_CP021207.1_4011009_4014231_+	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|73aa|up_7|NZ_CP021207.1_4014238_4014457_-	NA	NA|132aa|up_6|NZ_CP021207.1_4014491_4014887_+	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|197aa|up_5|NZ_CP021207.1_4015005_4015596_-	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|262aa|up_4|NZ_CP021207.1_4015601_4016387_-	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|518aa|up_3|NZ_CP021207.1_4016495_4018049_-	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|406aa|up_2|NZ_CP021207.1_4018121_4019339_-	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|381aa|up_1|NZ_CP021207.1_4019467_4020610_-	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|505aa|up_0|NZ_CP021207.1_4020640_4022155_-	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|257aa|down_0|NZ_CP021207.1_4022627_4023398_+	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|314aa|down_1|NZ_CP021207.1_4023412_4024354_+	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|429aa|down_2|NZ_CP021207.1_4024404_4025691_+	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|96aa|down_3|NZ_CP021207.1_4025687_4025975_+	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|444aa|down_4|NZ_CP021207.1_4026033_4027365_+	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|177aa|down_5|NZ_CP021207.1_4027472_4028003_+	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF	NA|621aa|down_6|NZ_CP021207.1_4027995_4029858_+	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|160aa|down_7|NZ_CP021207.1_4030049_4030529_+	PRK10769, folA, type 3 dihydrofolate reductase	NA|78aa|down_8|NZ_CP021207.1_4030614_4030848_+	COG5302, COG5302, Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid [General function prediction only]	NA|95aa|down_9|NZ_CP021207.1_4030850_4031135_+	pfam01845, CcdB, CcdB protein
GCF_002142715.1_ASM214271v1	NZ_CP021207	Escherichia coli strain strain Z247 chromosome, complete genome	2	4799758-4799899	1	CRISPRCasFinder	no		cas3,RT,DEDDh,DinG,c2c9_V-U4,csa3,WYL	Orphan	GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGAAATGCAG	47	0	0	NA	NA	NA	1	1	Orphan	cas3,RT,DEDDh,DinG,c2c9_V-U4,csa3,WYL	NA|36aa|up_4|NZ_CP021207.1_4795979_4796087_-,NA	NA|399aa|up_9|NZ_CP021207.1_4790420_4791617_+	pfam04295, GD_AH_C, D-galactarate dehydratase / Altronate hydrolase, C-terminus	NA|323aa|up_8|NZ_CP021207.1_4791644_4792613_+	cd13669, PBP2_TRAP_TM0322_like, Periplasmic component of TRAP-type C4-dicarboxylate transport system TM0322 from Thermotoga maritima and similar proteins; the type 2 periplasmic binding protein fold	NA|154aa|up_7|NZ_CP021207.1_4792672_4793134_+	COG3090, DctM, TRAP-type C4-dicarboxylate transport system, small permease component [Carbohydrate transport and metabolism]	NA|437aa|up_6|NZ_CP021207.1_4793133_4794444_+	COG1593, DctQ, TRAP-type C4-dicarboxylate transport system, large permease component [Carbohydrate transport and metabolism]	NA|428aa|up_5|NZ_CP021207.1_4794490_4795774_-	PRK05614, gltA, citrate synthase	NA|36aa|up_4|NZ_CP021207.1_4795979_4796087_-	NA	NA|135aa|up_3|NZ_CP021207.1_4796467_4796872_+	PRK09487, sdhC, succinate dehydrogenase cytochrome b556 subunit	NA|116aa|up_2|NZ_CP021207.1_4796865_4797213_+	PRK09488, sdhD, succinate dehydrogenase membrane anchor subunit	NA|589aa|up_1|NZ_CP021207.1_4797212_4798979_+	PRK08958, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed	NA|239aa|up_0|NZ_CP021207.1_4798994_4799711_+	PRK05950, sdhB, succinate dehydrogenase iron-sulfur subunit; Reviewed	NA|934aa|down_0|NZ_CP021207.1_4800072_4802874_+	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed	NA|406aa|down_1|NZ_CP021207.1_4802888_4804106_+	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA|389aa|down_2|NZ_CP021207.1_4804199_4805366_+	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta	NA|290aa|down_3|NZ_CP021207.1_4805365_4806235_+	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated	NA|241aa|down_4|NZ_CP021207.1_4806338_4807061_-	PRK09764, PRK09764, GntR family transcriptional regulator	NA|639aa|down_5|NZ_CP021207.1_4807229_4809146_+	PRK09765, PRK09765, PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC; Provisional	NA|878aa|down_6|NZ_CP021207.1_4809163_4811797_+	PRK09819, PRK09819, mannosylglycerate hydrolase	NA|398aa|down_7|NZ_CP021207.1_4811994_4813188_+	sd00006, TPR, Tetratricopeptide repeat	NA|523aa|down_8|NZ_CP021207.1_4814730_4816299_+	PRK15097, PRK15097, cytochrome bd-I ubiquinol oxidase subunit CydA	NA|380aa|down_9|NZ_CP021207.1_4816314_4817454_+	PRK15003, PRK15003, cytochrome d ubiquinol oxidase subunit II
GCF_002142715.1_ASM214271v1	NZ_CP021207	Escherichia coli strain strain Z247 chromosome, complete genome	3	4965965-4966047	2	CRISPRCasFinder	no		cas3,RT,DEDDh,DinG,c2c9_V-U4,csa3,WYL	Orphan	AGTTCACTGCCGTACAGGCAGCT	23	0	0	NA	NA	I-F	1	1	Orphan	cas3,RT,DEDDh,DinG,c2c9_V-U4,csa3,WYL	NA,NA	NA|551aa|up_9|NZ_CP021207.1_4952455_4954108_-	PRK05290, PRK05290, hybrid cluster protein; Provisional	NA|300aa|up_8|NZ_CP021207.1_4954251_4955151_-	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|232aa|up_7|NZ_CP021207.1_4955565_4956261_-	PRK05420, PRK05420, aquaporin Z; Provisional	NA|553aa|up_6|NZ_CP021207.1_4956685_4958344_+	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|319aa|up_5|NZ_CP021207.1_4958340_4959297_-	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown]	NA|372aa|up_4|NZ_CP021207.1_4959447_4960563_+	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|649aa|up_3|NZ_CP021207.1_4960559_4962506_+	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|75aa|up_2|NZ_CP021207.1_4962578_4962803_-	PRK09937, PRK09937, cold shock-like protein CspD	NA|107aa|up_1|NZ_CP021207.1_4963125_4963446_+	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|759aa|up_0|NZ_CP021207.1_4963476_4965753_+	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|73aa|down_0|NZ_CP021207.1_4966437_4966656_-	PRK00276, infA, translation initiation factor IF-1; Validated	NA|235aa|down_1|NZ_CP021207.1_4966940_4967645_-	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|574aa|down_2|NZ_CP021207.1_4967686_4969408_-	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|589aa|down_3|NZ_CP021207.1_4969408_4971175_-	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|322aa|down_4|NZ_CP021207.1_4971297_4972263_-	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|165aa|down_5|NZ_CP021207.1_4972806_4973301_+	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|1369aa|down_6|NZ_CP021207.1_4973435_4977542_+	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|204aa|down_7|NZ_CP021207.1_4977700_4978312_+	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|448aa|down_8|NZ_CP021207.1_4978322_4979666_+	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|431aa|down_9|NZ_CP021207.1_4979756_4981049_+	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional
