The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP015817	Staphylococcus aureus strain FORC_039 chromosome, complete genome	2798022	759019	766840	2798022		Hokovirus(16.67%)	10	NA	NA
WP_000244415.1|759019_760075_-	two-component system sensor histidine kinase SaeS	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
WP_000149344.1|760074_760761_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001037807.1|760735_761209_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001093562.1|761551_761992_-	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_000604990.1|762271_762856_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001062972.1|762954_763668_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000941336.1|763671_764091_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_000446724.1|764092_764761_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000604515.1|765111_765705_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	43.5	1.2e-38
WP_001217797.1|765688_766840_+	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	36.1	2.1e-23
>prophage 2
NZ_CP015817	Staphylococcus aureus strain FORC_039 chromosome, complete genome	2798022	778812	793464	2798022		uncultured_Caudovirales_phage(50.0%)	14	NA	NA
WP_000663024.1|778812_779871_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.7	7.9e-22
WP_000197271.1|780165_780708_+	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000429006.1|781308_782226_-	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	2.1e-07
WP_031835073.1|782316_782418_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000193751.1|782495_784001_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_000930014.1|784341_784842_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_001068497.1|784861_785728_-	DMT family transporter	NA	NA	NA	NA	NA
WP_000692521.1|786528_786927_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_000855505.1|786889_788995_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000562498.1|789112_790084_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000499195.1|790597_790753_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000876318.1|790791_791763_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
WP_001245573.1|791749_792706_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000616840.1|792702_793464_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	6.5e-18
>prophage 3
NZ_CP015817	Staphylococcus aureus strain FORC_039 chromosome, complete genome	2798022	878555	963663	2798022	portal,integrase,holin,head,tail,tRNA,protease,capsid,terminase	Staphylococcus_phage(75.0%)	109	875308:875325	969993:970010
875308:875325	attL	AAATAATGAATCCAGCAA	NA	NA	NA	NA
WP_001006454.1|878555_879806_+	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	44.5	1.4e-110
WP_001010508.1|879795_880260_+	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA	NA
WP_001074405.1|880410_881808_+	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
WP_086353406.1|881875_882925_-|integrase	site-specific integrase	integrase	A1KWY3	Staphylococcus_virus	99.4	5.0e-202
WP_000337826.1|883037_883217_+	hypothetical protein	NA	A0EWN7	Staphylococcus_virus	100.0	8.3e-25
WP_000392186.1|883196_884129_-	hypothetical protein	NA	A0EWN8	Staphylococcus_virus	100.0	3.9e-174
WP_000661437.1|884160_884886_-	PH domain-containing protein	NA	A0A0F6N4L7	Staphylococcus_phage	100.0	9.9e-125
WP_000775187.1|884913_885588_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A0F6N3H6	Staphylococcus_phage	100.0	4.9e-126
WP_001055143.1|885604_885937_-	helix-turn-helix transcriptional regulator	NA	R4IH08	Staphylococcus_phage	100.0	4.1e-57
WP_086353407.1|886199_886394_+	helix-turn-helix transcriptional regulator	NA	A0A0F6N3M9	Staphylococcus_phage	98.4	3.1e-25
WP_001002757.1|886393_887161_+	phage antirepressor Ant	NA	A0A0F6N3N8	Staphylococcus_phage	100.0	1.1e-142
WP_000187184.1|887161_887386_+	hypothetical protein	NA	A0A0F6N4M2	Staphylococcus_phage	100.0	3.2e-34
WP_001094943.1|887425_887875_+	hypothetical protein	NA	A1KWZ2	Staphylococcus_virus	100.0	3.0e-79
WP_000977381.1|887888_888110_+	hypothetical protein	NA	A0A0F6N3I2	Staphylococcus_phage	100.0	1.5e-31
WP_000066011.1|888102_888264_+	DUF1270 domain-containing protein	NA	Q4ZAZ7	Staphylococcus_virus	100.0	2.5e-20
WP_000165363.1|888356_888659_+	DUF2482 family protein	NA	A0A0F6N3N3	Staphylococcus_phage	100.0	1.4e-48
WP_000291067.1|888663_888924_+	DUF1108 family protein	NA	A1KX65	Staphylococcus_virus	100.0	8.9e-44
WP_001004336.1|888936_889473_+	host-nuclease inhibitor Gam family protein	NA	A0A0F6N4M6	Staphylococcus_phage	100.0	1.4e-80
WP_000840496.1|889473_890124_+	ERF family protein	NA	A0A0F6N3I5	Staphylococcus_phage	100.0	1.1e-119
WP_086353408.1|890120_890564_+	single-stranded DNA-binding protein	NA	Q9B0G2	Staphylococcus_virus	99.3	4.1e-73
WP_086353409.1|890575_891250_+	hypothetical protein	NA	A1KX69	Staphylococcus_virus	98.2	3.6e-129
WP_039702431.1|891242_891986_+	hypothetical protein	NA	C8CGZ1	Staphylococcus_phage	77.5	1.0e-60
WP_031880733.1|891995_892775_+	ATP-binding protein	NA	W5RAN3	Staphylococcus_phage	99.6	2.7e-144
WP_000237153.1|892768_892930_+	hypothetical protein	NA	D2JGK6	Staphylococcus_phage	100.0	4.5e-22
WP_001123673.1|892942_893164_+	DUF3269 family protein	NA	A7TWN4	Staphylococcus_phage	100.0	1.3e-35
WP_000049784.1|893174_893579_+	DUF1064 domain-containing protein	NA	A7TWN5	Staphylococcus_phage	100.0	7.1e-72
WP_001187240.1|893583_893769_+	DUF3113 family protein	NA	W5R8N4	Staphylococcus_phage	98.4	3.2e-27
WP_000907416.1|893769_894390_+	hypothetical protein	NA	A0A0H3U4U9	Staphylococcus_phage	95.1	4.9e-80
WP_000111490.1|894386_894644_+	DUF3310 domain-containing protein	NA	A7TWG9	Staphylococcus_phage	98.8	4.4e-43
WP_000235327.1|894646_894847_+	hypothetical protein	NA	A1KX12	Staphylococcus_virus	98.5	5.3e-28
WP_072497105.1|894855_895104_+	hypothetical protein	NA	A0A1P8L6E3	Staphylococcus_phage	97.5	7.5e-40
WP_000694059.1|895117_895522_+	hypothetical protein	NA	A0A0H4IPW3	Staphylococcus_phage	99.3	2.1e-71
WP_015978314.1|895521_895797_+	hypothetical protein	NA	Q4ZBD3	Staphylococcus_virus	100.0	2.3e-45
WP_064266706.1|895789_896038_+	DUF1024 family protein	NA	B7T0H8	Staphylococcus_virus	96.3	5.9e-37
WP_031911468.1|896030_896540_+	dUTP pyrophosphatase	NA	A9CR88	Staphylococcus_phage	99.4	1.2e-89
WP_001282070.1|896576_896822_+	hypothetical protein	NA	A0A0H4ITX2	Staphylococcus_phage	100.0	2.0e-37
WP_000195795.1|896818_897007_+	DUF1381 domain-containing protein	NA	A0A2I6PEH2	Staphylococcus_phage	93.4	2.8e-23
WP_000039541.1|896981_897182_+	hypothetical protein	NA	A0A2I6PF22	Staphylococcus_phage	98.5	2.0e-27
WP_000237868.1|897184_897334_+	transcriptional activator RinB	NA	A0A2I6PDY4	Staphylococcus_phage	98.0	1.1e-17
WP_000265043.1|897333_897534_+	DUF1514 family protein	NA	A0A2I6PDV9	Staphylococcus_phage	100.0	1.4e-28
WP_000590122.1|897561_897978_+	hypothetical protein	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
WP_000988330.1|898209_898509_+	HNH endonuclease	NA	G4KNP8	Staphylococcus_phage	100.0	4.6e-52
WP_000402904.1|898638_898983_+	hypothetical protein	NA	G4KNP9	Staphylococcus_phage	100.0	9.4e-57
WP_000625088.1|898979_900641_+|terminase	terminase large subunit	terminase	A0A2I6PDJ8	Staphylococcus_phage	100.0	0.0e+00
WP_000025274.1|900656_901844_+|portal	phage portal protein	portal	A0A2I6PDI1	Staphylococcus_phage	100.0	1.0e-219
WP_000642728.1|901827_902565_+|protease	Clp protease ClpP	protease	G4KNQ2	Staphylococcus_phage	100.0	1.8e-129
WP_000154559.1|902588_903734_+|capsid	phage major capsid protein	capsid	G4KNQ3	Staphylococcus_phage	100.0	9.6e-215
WP_031807821.1|903753_904038_+	hypothetical protein	NA	A0A2I6PDJ3	Staphylococcus_phage	98.9	6.8e-45
WP_000150936.1|904027_904312_+|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
WP_000755150.1|904295_904658_+|head,tail	head-tail adaptor protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
WP_000114225.1|904654_905059_+	HK97 gp10 family phage protein	NA	A0A2I6PDJ6	Staphylococcus_phage	100.0	4.3e-69
WP_000565498.1|905055_905463_+	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000268740.1|905463_906108_+|tail	phage tail protein	tail	G4KNQ7	Staphylococcus_phage	100.0	6.5e-120
WP_071621395.1|906149_906374_+	Ig-like domain-containing protein	NA	A0A075LYE8	Staphylococcus_phage	100.0	3.0e-32
WP_001096355.1|906423_906774_+	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_001549167.1|906824_906962_+	hypothetical protein	NA	A0A2I6PDX7	Staphylococcus_phage	100.0	3.4e-18
WP_086353410.1|907018_911563_+|tail	phage tail tape measure protein	tail	A0A075M036	Staphylococcus_phage	97.8	0.0e+00
WP_000567390.1|911559_913044_+|tail	phage tail family protein	tail	A0A068A242	Staphylococcus_phage	100.0	1.5e-297
WP_000582178.1|913059_916845_+	hypothetical protein	NA	A0A1P8L6B8	Staphylococcus_phage	99.8	0.0e+00
WP_001153681.1|916834_916987_+	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	100.0	5.2e-20
WP_001040261.1|917033_917321_+	hypothetical protein	NA	D2JLG1	Staphylococcus_phage	100.0	1.3e-43
WP_000539688.1|917378_917675_+	DUF2951 domain-containing protein	NA	D2JLG2	Staphylococcus_phage	100.0	2.9e-46
WP_011447039.1|917824_918001_+|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
WP_031866188.1|918053_918161_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000611512.1|918212_918467_+|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_000920038.1|919424_919916_+	staphylokinase	NA	A0A1W6JQ12	Staphylococcus_phage	99.4	4.7e-86
WP_000702263.1|921412_921763_+	complement inhibitor SCIN-A	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
WP_001791826.1|921815_922076_-	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000669791.1|922386_922566_-	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	98.3	1.4e-24
WP_001566719.1|923523_925272_+	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_001068523.1|925896_927183_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_000990056.1|927382_927481_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000681968.1|927723_927900_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000691587.1|928158_928539_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000991304.1|928535_929432_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	1.1e-16
WP_000645736.1|929432_930113_+	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000763045.1|930109_930982_+	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	35.2	6.1e-28
WP_001221651.1|930981_931722_+	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA	NA
WP_000182842.1|931787_932351_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_000966288.1|932471_932996_+	membrane protein	NA	NA	NA	NA	NA
WP_001033971.1|933055_933613_+	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_000713071.1|933609_934452_+	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_001188074.1|934508_935549_-	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_000267034.1|935999_936173_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000205106.1|936745_937147_-	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	42.9	6.0e-23
WP_000181322.1|937416_938445_+	lactonase family protein	NA	NA	NA	NA	NA
WP_049311846.1|938564_939944_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_072384913.1|939994_940168_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001140871.1|940360_941290_-	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
WP_000149686.1|941342_941903_-	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_000275709.1|942274_943372_+	pectate lyase	NA	U5PWM6	Bacillus_phage	34.6	4.3e-47
WP_000323161.1|943576_945139_+	SLC13 family permease	NA	NA	NA	NA	NA
WP_001802312.1|945149_945257_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001177828.1|945328_946123_-	prephenate dehydratase	NA	NA	NA	NA	NA
WP_000897640.1|946142_947219_-	nitric oxide synthase oxygenase	NA	NA	NA	NA	NA
WP_000284433.1|947402_948872_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.1	3.5e-108
WP_000040866.1|948864_949686_+	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	2.3e-69
WP_000011542.1|949956_950559_+	DUF2179 domain-containing protein	NA	NA	NA	NA	NA
WP_000669864.1|950539_950713_+	NETI motif-containing protein	NA	NA	NA	NA	NA
WP_000434933.1|951004_951331_-	staphostatin A	NA	NA	NA	NA	NA
WP_000827764.1|951361_952528_-|protease	cysteine protease staphopain A	protease	NA	NA	NA	NA
WP_000572878.1|953388_954684_+	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.6e-16
WP_001165363.1|954792_955095_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000272070.1|955266_955959_+	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA	NA
WP_000992924.1|955955_958148_+	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
WP_000774559.1|958151_960155_+	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	36.1	3.4e-114
WP_000831695.1|960167_961367_+	CamS family sex pheromone protein	NA	NA	NA	NA	NA
WP_086353411.1|961455_962994_-	sodium/proline symporter PutP	NA	NA	NA	NA	NA
WP_000170162.1|963360_963663_+|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
969993:970010	attR	TTGCTGGATTCATTATTT	NA	NA	NA	NA
>prophage 4
NZ_CP015817	Staphylococcus aureus strain FORC_039 chromosome, complete genome	2798022	1053106	1060851	2798022	protease	Staphylococcus_phage(100.0%)	8	NA	NA
WP_001092769.1|1053106_1053685_-	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	74.0	5.8e-67
WP_001039430.1|1054648_1055356_+|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	97.4	3.6e-127
WP_001039447.1|1055480_1056203_+|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	99.6	2.4e-131
WP_001038867.1|1056260_1056980_+|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	99.2	1.2e-130
WP_001038706.1|1057100_1057820_+|protease	serine protease SplD	protease	A0A2H4PQP9	Staphylococcus_phage	99.2	5.1e-129
WP_031865257.1|1057884_1058019_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001566696.1|1058183_1059740_+	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	99.6	1.0e-288
WP_000072558.1|1059732_1060851_+	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	35.1	7.6e-39
>prophage 5
NZ_CP015817	Staphylococcus aureus strain FORC_039 chromosome, complete genome	2798022	1066084	1112934	2798022	tRNA,protease	Staphylococcus_phage(94.29%)	42	NA	NA
WP_000864138.1|1066084_1066642_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4PQN8	Staphylococcus_phage	96.2	3.5e-77
WP_049311638.1|1067512_1067854_-	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	95.6	3.0e-55
WP_000669019.1|1067894_1068521_-	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	96.6	2.9e-96
WP_000070647.1|1068596_1069592_-	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	94.0	2.1e-69
WP_001789021.1|1069672_1070323_-	excalibur calcium-binding domain-containing protein	NA	A0A2H4PQM8	Staphylococcus_phage	98.6	5.2e-56
WP_072361838.1|1070625_1071081_+	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	98.6	6.7e-79
WP_000348369.1|1071239_1072718_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	98.0	1.6e-283
WP_000778537.1|1072722_1073724_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	98.8	5.1e-188
WP_000718107.1|1073720_1073978_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000672015.1|1074043_1074517_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	99.4	5.5e-84
WP_072361841.1|1074521_1075268_+	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	99.6	2.9e-143
WP_000109917.1|1075520_1077113_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	99.8	0.0e+00
WP_000933822.1|1077484_1078678_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
WP_000366170.1|1078802_1079711_+	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	99.3	3.7e-137
WP_086353414.1|1079922_1080756_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	98.9	6.6e-157
WP_000623470.1|1082752_1083106_-	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	94.0	3.8e-21
WP_001200542.1|1083102_1083468_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
WP_000091441.1|1083723_1084026_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001096494.1|1084285_1084999_+	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_001168902.1|1085438_1086074_-|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_001030469.1|1086369_1086813_+	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
WP_001153742.1|1086799_1087243_-	competence protein ComK	NA	NA	NA	NA	NA
WP_000671324.1|1087355_1087826_-	RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	98.7	6.7e-82
WP_000384171.1|1088024_1088249_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001032833.1|1088524_1089379_+	glucosaminidase domain-containing protein	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000989121.1|1089465_1090758_-	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
WP_000221177.1|1090757_1091072_-	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	98.1	9.8e-53
WP_001261668.1|1091594_1093097_+	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	1.9e-29
WP_000077358.1|1093577_1094621_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.8	5.3e-196
WP_000493878.1|1094627_1095260_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	99.0	2.2e-112
WP_001159022.1|1095270_1096452_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.7	6.6e-227
WP_001008551.1|1096464_1096929_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
WP_001196354.1|1097050_1098052_-	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
WP_001790712.1|1098163_1098283_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000266096.1|1098285_1099113_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_000757543.1|1099684_1100086_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000764419.1|1100205_1100769_-	class I SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
WP_000526540.1|1100765_1101719_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	99.3	1.4e-78
WP_001025061.1|1101828_1103010_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	100.0	5.6e-218
WP_001566684.1|1103297_1105715_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.3	0.0e+00
WP_000836463.1|1105736_1106048_+	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	99.0	6.3e-52
WP_049311740.1|1106373_1112934_+	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	96.7	4.2e-307
>prophage 6
NZ_CP015817	Staphylococcus aureus strain FORC_039 chromosome, complete genome	2798022	1238952	1247995	2798022	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_001005768.1|1238952_1239957_+	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
WP_086353416.1|1239958_1240984_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001112045.1|1241006_1242146_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001160682.1|1242164_1242425_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_000749795.1|1242699_1244979_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_000594995.1|1245181_1247455_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.8	1.2e-62
WP_000364542.1|1247476_1247995_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
>prophage 7
NZ_CP015817	Staphylococcus aureus strain FORC_039 chromosome, complete genome	2798022	1317426	1325738	2798022	tRNA	Caulobacter_phage(16.67%)	7	NA	NA
WP_001217247.1|1317426_1319226_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	3.5e-54
WP_001283055.1|1319449_1320556_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_000624580.1|1320686_1321364_+|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_000683933.1|1321366_1322467_+	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	29.6	5.2e-08
WP_001062177.1|1322580_1323927_+	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	34.0	2.4e-55
WP_000924214.1|1323936_1324827_+	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
WP_001213908.1|1324952_1325738_+	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
>prophage 8
NZ_CP015817	Staphylococcus aureus strain FORC_039 chromosome, complete genome	2798022	1866777	1875250	2798022		Synechococcus_phage(33.33%)	9	NA	NA
WP_000238670.1|1866777_1867344_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	3.6e-29
WP_000030811.1|1867346_1868375_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.7	3.4e-62
WP_000483712.1|1868367_1869852_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.5	7.2e-45
WP_000032727.1|1869830_1872020_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.7	1.0e-140
WP_000666799.1|1872012_1872684_-	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000848350.1|1872685_1872949_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000174053.1|1872948_1873653_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
WP_001010406.1|1873656_1874781_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000861572.1|1874767_1875250_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
>prophage 9
NZ_CP015817	Staphylococcus aureus strain FORC_039 chromosome, complete genome	2798022	2031012	2077686	2798022	portal,integrase,holin,head,tail,capsid,terminase,plate	Staphylococcus_phage(83.82%)	70	2048692:2048708	2080077:2080093
WP_000528632.1|2031012_2031570_-	hypothetical protein	NA	W5R8Q1	Staphylococcus_phage	100.0	5.7e-104
WP_070866175.1|2032357_2032915_+	DUF4888 domain-containing protein	NA	A0A0F6N4L1	Staphylococcus_phage	99.5	2.8e-95
WP_086353425.1|2032974_2034387_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A0F6N3N1	Staphylococcus_phage	99.4	3.2e-284
WP_000351119.1|2034373_2034649_-|holin	phage holin	holin	A0A0F6N3M0	Staphylococcus_phage	100.0	8.6e-45
WP_000398856.1|2034704_2035100_-	hypothetical protein	NA	B2ZZ04	Staphylococcus_phage	99.2	2.7e-68
WP_086353426.1|2035105_2036278_-|plate	BppU family phage baseplate upper protein	plate	B2ZZ03	Staphylococcus_phage	99.5	2.4e-197
WP_000524038.1|2036290_2038165_-	glucosaminidase domain-containing protein	NA	A0A2H4JB48	uncultured_Caudovirales_phage	99.4	0.0e+00
WP_000466777.1|2038301_2038601_-	DUF2951 domain-containing protein	NA	A0A0F6N3M6	Staphylococcus_phage	100.0	9.9e-47
WP_001790193.1|2038641_2038815_-	XkdX family protein	NA	Q8LTH6	Staphylococcus_phage	100.0	1.7e-27
WP_000705914.1|2038824_2039202_-	DUF2977 domain-containing protein	NA	W5R9M2	Staphylococcus_phage	99.2	3.4e-60
WP_000259612.1|2039201_2041025_-|plate	BppU family phage baseplate upper protein	plate	W5R8J5	Staphylococcus_phage	99.0	3.7e-293
WP_046594647.1|2041024_2042923_-	hypothetical protein	NA	A0A2H4JCV8	uncultured_Caudovirales_phage	98.6	0.0e+00
WP_046594648.1|2042935_2044822_-|tail	phage tail protein	tail	W5RAP4	Staphylococcus_phage	96.8	0.0e+00
WP_046594649.1|2044832_2045768_-|tail	phage tail family protein	tail	A0A0E3T9N1	Staphylococcus_phage	96.8	2.7e-175
WP_072532484.1|2045782_2048752_-|terminase	terminase	terminase	A0A2H4PQM1	Staphylococcus_phage	99.2	1.1e-265
2048692:2048708	attL	TAATATTCCTTTTAAAA	NA	NA	NA	NA
WP_000204079.1|2048754_2049096_-	hypothetical protein	NA	W5R8J4	Staphylococcus_phage	100.0	3.5e-56
WP_000141084.1|2049116_2049611_-	hypothetical protein	NA	A0A0H4IPX9	Staphylococcus_phage	100.0	2.5e-87
WP_000046067.1|2049672_2050233_-	hypothetical protein	NA	A0A0H4ITY2	Staphylococcus_phage	100.0	5.9e-101
WP_000270196.1|2050219_2050657_-	DUF3168 domain-containing protein	NA	A0A0E3T9M9	Staphylococcus_phage	100.0	2.1e-77
WP_046594651.1|2050669_2051083_-	HK97 gp10 family phage protein	NA	A0A0E3XCY8	Staphylococcus_phage	98.5	2.2e-76
WP_000482988.1|2051069_2051405_-|head	phage head closure protein	head	A0A0H4ISR6	Staphylococcus_phage	100.0	1.0e-60
WP_046594652.1|2051397_2051712_-|head,tail	phage head-tail connector protein	head,tail	A0A2H4PQL2	Staphylococcus_phage	97.1	6.3e-52
WP_046594653.1|2051711_2052038_-	Rho termination factor N-terminal domain-containing protein	NA	Q9G000	Staphylococcus_virus	97.2	8.0e-50
WP_046594654.1|2052054_2052879_-|capsid	N4-gp56 family major capsid protein	capsid	A0A0H4J347	Staphylococcus_phage	98.9	3.6e-147
WP_046594655.1|2052899_2053496_-	phage scaffolding protein	NA	A0A0H4IP83	Staphylococcus_phage	75.8	7.3e-73
WP_086353427.1|2053593_2054574_-|capsid	minor capsid protein	capsid	A0A0E3XC69	Staphylococcus_phage	98.5	1.7e-180
WP_086353428.1|2054512_2055991_-|portal	phage portal protein	portal	Q4ZB45	Staphylococcus_virus	99.4	9.6e-284
WP_001807202.1|2055944_2057153_-|terminase	PBSX family phage terminase large subunit	terminase	A0A0H4ITX6	Staphylococcus_phage	100.0	1.0e-235
WP_000594085.1|2057145_2057640_-	hypothetical protein	NA	A0A0H4J343	Staphylococcus_phage	100.0	8.4e-83
WP_000286968.1|2057991_2058393_-	hypothetical protein	NA	A0A2H4PQK5	Staphylococcus_phage	100.0	5.6e-69
WP_000595256.1|2058393_2058567_-	transcriptional activator RinB	NA	A0A0H3U4U1	Staphylococcus_phage	100.0	9.8e-23
WP_024936909.1|2058563_2058953_-	hypothetical protein	NA	A7TWI1	Staphylococcus_phage	99.2	1.4e-64
WP_000608273.1|2058942_2059179_-	hypothetical protein	NA	S4SWB7	Staphylococcus_phage	100.0	1.6e-36
WP_001072795.1|2059171_2059375_-	hypothetical protein	NA	A0A0N9BAX5	Staphylococcus_phage	100.0	5.2e-31
WP_086353430.1|2059371_2059578_-	DUF1381 domain-containing protein	NA	A0A1W6JPM8	Staphylococcus_phage	97.1	6.0e-19
WP_001209216.1|2059594_2059768_-	hypothetical protein	NA	A0A1W6JQ45	Staphylococcus_phage	100.0	4.7e-25
WP_086353431.1|2059804_2060338_-	dUTP pyrophosphatase	NA	A0A059T5A7	Staphylococcus_phage	97.2	2.8e-92
WP_086353432.1|2060330_2060573_-	hypothetical protein	NA	A0A2I6PF40	Staphylococcus_phage	97.5	4.1e-35
WP_086353433.1|2060562_2060799_-	DUF1024 family protein	NA	A0A0H3U313	Staphylococcus_phage	98.7	1.5e-34
WP_001105611.1|2060791_2061157_-	hypothetical protein	NA	A7YGS3	Staphylococcus_virus	95.0	1.6e-59
WP_001622142.1|2061171_2061420_-	hypothetical protein	NA	A0A1W6JPX8	Staphylococcus_phage	97.6	2.1e-42
WP_001622141.1|2061420_2061780_-	hypothetical protein	NA	B2ZYW3	Staphylococcus_phage	97.5	3.2e-60
WP_020808085.1|2061780_2061969_-	DUF3113 family protein	NA	A0A0E3TAK3	Staphylococcus_phage	96.7	2.0e-24
WP_000049795.1|2061973_2062378_-	DUF1064 domain-containing protein	NA	A0A068A2B2	Staphylococcus_phage	100.0	9.6e-69
WP_001123695.1|2062387_2062609_-	DUF3269 family protein	NA	A0A0H3U2V4	Staphylococcus_phage	100.0	2.2e-35
WP_000256589.1|2062621_2062780_-	hypothetical protein	NA	A0A2H4PQI7	Staphylococcus_phage	100.0	4.5e-22
WP_017804692.1|2062773_2063553_-	ATP-binding protein	NA	A7YGR0	Staphylococcus_virus	100.0	1.4e-145
WP_000190224.1|2063562_2064333_-	conserved phage C-terminal domain-containing protein	NA	W5R8N2	Staphylococcus_phage	100.0	1.4e-116
WP_000371250.1|2064397_2065255_+	DUF4393 domain-containing protein	NA	Q4ZBL8	Staphylococcus_phage	100.0	9.5e-159
WP_015977703.1|2065360_2066035_-	DUF968 domain-containing protein	NA	Q4ZD97	Staphylococcus_virus	100.0	2.8e-129
WP_000934783.1|2066048_2066477_-	single-stranded DNA-binding protein	NA	A0A2H4JHI1	uncultured_Caudovirales_phage	93.0	1.2e-53
WP_001043071.1|2066476_2067115_-	ERF family protein	NA	A0A059T7J7	Staphylococcus_phage	98.6	8.2e-115
WP_000002516.1|2067114_2067594_-	siphovirus Gp157 family protein	NA	A0A0H4J328	Staphylococcus_phage	100.0	1.1e-82
WP_031807830.1|2067608_2067869_-	DUF1108 family protein	NA	A1KX65	Staphylococcus_virus	96.5	1.3e-42
WP_000066020.1|2067960_2068122_-	DUF1270 domain-containing protein	NA	A0A2I6PDF7	Staphylococcus_phage	100.0	1.9e-20
WP_001120197.1|2068118_2068439_-	DUF771 domain-containing protein	NA	A0A2I6PDH6	Staphylococcus_phage	100.0	1.5e-56
WP_000275058.1|2068497_2069130_+	hypothetical protein	NA	A7TW95	Staphylococcus_phage	100.0	1.5e-113
WP_000939496.1|2069144_2069285_-	hypothetical protein	NA	A0A2I6PDG0	Staphylococcus_phage	100.0	1.9e-16
WP_001148861.1|2069315_2069513_-	hypothetical protein	NA	A0A1W6JPV3	Staphylococcus_phage	100.0	1.2e-24
WP_000854068.1|2069529_2069799_-	helix-turn-helix transcriptional regulator	NA	H9A0Y0	Staphylococcus_phage	94.4	5.3e-39
WP_031768797.1|2069933_2070647_+	helix-turn-helix transcriptional regulator	NA	M9NUL0	Staphylococcus_phage	99.2	1.0e-129
WP_001049401.1|2070658_2070805_+	hypothetical protein	NA	U5U441	Staphylococcus_phage	100.0	4.3e-19
WP_000109193.1|2070801_2070987_+	hypothetical protein	NA	Q9G041	Staphylococcus_virus	96.7	4.3e-24
WP_031901045.1|2071042_2071627_+	hypothetical protein	NA	Q4ZCY3	Staphylococcus_virus	97.4	8.4e-66
WP_000694772.1|2071856_2072039_+	hypothetical protein	NA	A0A2I6PDF8	Staphylococcus_phage	100.0	6.9e-27
WP_031901044.1|2072137_2073121_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_031901043.1|2073131_2073374_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000857185.1|2073436_2074474_+|integrase	site-specific integrase	integrase	Q38086	Staphylococcus_phage	100.0	4.5e-179
WP_000595393.1|2075592_2076609_-	bi-component leukocidin LukGH subunit G	NA	A0A1X9IGW5	Staphylococcus_phage	30.6	3.0e-26
WP_000791418.1|2076630_2077686_-	bi-component leukocidin LukGH subunit H	NA	A0A2I6PDF3	Staphylococcus_phage	31.8	1.8e-34
2080077:2080093	attR	TAATATTCCTTTTAAAA	NA	NA	NA	NA
>prophage 1
NZ_CP015818	Staphylococcus aureus strain FORC_039 plasmid unnamed, complete sequence	35415	9199	19439	35415	transposase	Streptococcus_phage(37.5%)	14	NA	NA
WP_002292226.1|9199_9937_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NA	E4ZFQ0	Streptococcus_phage	99.6	1.4e-134
WP_001814874.1|10059_10143_-	23S rRNA methyltransferase attenuation leader peptide	NA	NA	NA	NA	NA
WP_001015311.1|12302_12983_-|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.6	1.5e-127
WP_086353444.1|13131_13338_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012655887.1|13359_13665_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012655888.1|13692_14304_-	recombinase family protein	NA	A0A219YA40	Aeromonas_phage	36.6	1.8e-18
WP_012655889.1|14630_15206_+	recombinase family protein	NA	M9Q1K0	Clostridium_phage	30.8	1.2e-16
WP_025906304.1|15289_15781_+	dihydrofolate reductase	NA	A0A076GDN3	Bacillus_phage	40.9	2.9e-27
WP_012655891.1|15777_16485_+	FAD-dependent thymidylate synthase	NA	M1IEJ2	Bacillus_phage	60.6	8.0e-79
WP_000164958.1|16590_17406_+	AAA family ATPase	NA	A0A0M3LP72	Mannheimia_phage	29.8	4.0e-05
WP_172839227.1|17525_17741_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046472839.1|18061_18628_-	DUF4062 domain-containing protein	NA	NA	NA	NA	NA
WP_001791613.1|18839_18932_-	type I toxin-antitoxin system Fst family toxin	NA	NA	NA	NA	NA
WP_000119691.1|19091_19439_-	helix-turn-helix transcriptional regulator	NA	E4ZFI8	Streptococcus_phage	36.8	6.4e-13
