assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002139915.1_ASM213991v1	NZ_CP018788	Campylobacter lanienae strain NCTC 13003 chromosome, complete genome	1	119100-119193	1	CRISPRCasFinder	no		WYL,cas4,DEDDh,cas2,cas1,cas9	Orphan	GGTGGAATTTAAATAATTTTTGG	23	0	0	NA	NA	NA	1	1	Orphan	WYL,cas4,DEDDh,cas2,cas1,cas9	NA|85aa|up_2|NZ_CP018788.1_116194_116449_-,NA|61aa|up_1|NZ_CP018788.1_116621_116804_+,NA	NA|303aa|up_9|NZ_CP018788.1_110180_111089_-	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs	NA|86aa|up_8|NZ_CP018788.1_110980_111238_-	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs	NA|350aa|up_7|NZ_CP018788.1_111325_112375_-	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs	NA|187aa|up_6|NZ_CP018788.1_112375_112936_-	COG1898, RfbC, dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes [Cell envelope biogenesis, outer membrane]	NA|350aa|up_5|NZ_CP018788.1_113032_114082_-	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs	NA|180aa|up_4|NZ_CP018788.1_114158_114698_-	COG1898, RfbC, dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes [Cell envelope biogenesis, outer membrane]	NA|410aa|up_3|NZ_CP018788.1_114697_115927_-	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)	NA|85aa|up_2|NZ_CP018788.1_116194_116449_-	NA	NA|61aa|up_1|NZ_CP018788.1_116621_116804_+	NA	NA|364aa|up_0|NZ_CP018788.1_116830_117922_+	cd16439, beta_Kdo_transferase_KpsC_2, beta-3-deoxy-D-manno-oct-2-ulosonic acid (Kdo)-transferase KpsC, repeat 2	NA|261aa|down_0|NZ_CP018788.1_119249_120032_+	COG1682, TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|222aa|down_1|NZ_CP018788.1_120028_120694_+	cd03220, ABC_KpsT_Wzt, ATP-binding cassette component of polysaccharide transport system	NA|376aa|down_2|NZ_CP018788.1_120705_121833_+	COG3524, KpsE, Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane]	NA|398aa|down_3|NZ_CP018788.1_121836_123030_+	cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	NA|568aa|down_4|NZ_CP018788.1_123122_124826_+	pfam03235, DUF262, Protein of unknown function DUF262	NA|356aa|down_5|NZ_CP018788.1_125450_126518_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|427aa|down_6|NZ_CP018788.1_126519_127800_+	cd01118, ArsB_permease, Anion permease ArsB	NA|190aa|down_7|NZ_CP018788.1_127777_128347_+	pfam04307, YdjM, LexA-binding, inner membrane-associated putative hydrolase	NA|383aa|down_8|NZ_CP018788.1_128685_129834_+	COG3014, COG3014, Uncharacterized protein conserved in bacteria [Function unknown]	NA|128aa|down_9|NZ_CP018788.1_129837_130221_+	cd09030, DUF1425, Putative periplasmic lipoprotein
GCF_002139915.1_ASM213991v1	NZ_CP018788	Campylobacter lanienae strain NCTC 13003 chromosome, complete genome	2	181838-181940	2	CRISPRCasFinder	no	WYL	WYL,cas4,DEDDh,cas2,cas1,cas9	Unclear	CCAGCTAGATATATCTGAGTTAAAATTT	28	0	0	NA	NA	NA	1	1	Orphan	WYL,cas4,DEDDh,cas2,cas1,cas9	NA|60aa|up_2|NZ_CP018788.1_178659_178839_-,NA|376aa|up_1|NZ_CP018788.1_178852_179980_-,NA|155aa|down_4|NZ_CP018788.1_191412_191877_-,NA|55aa|down_5|NZ_CP018788.1_192261_192426_-,NA|58aa|down_6|NZ_CP018788.1_192461_192635_-,NA|86aa|down_7|NZ_CP018788.1_193320_193578_+,NA|205aa|down_8|NZ_CP018788.1_194327_194942_+,NA|77aa|down_9|NZ_CP018788.1_195042_195273_+	NA|594aa|up_9|NZ_CP018788.1_167040_168822_-	cd16017, LptA, Lipooligosaccharide Phosphoethanolamine Transferase A (LptA) or Lipid A Phosphoethanolamine Transferase	NA|439aa|up_8|NZ_CP018788.1_169138_170455_+	cd13134, MATE_like_8, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins	NA|157aa|up_7|NZ_CP018788.1_170660_171131_+	TIGR03153, cytochr_NrfH, cytochrome c nitrite reductase, small subunit	NA|619aa|up_6|NZ_CP018788.1_171189_173046_+	COG3303, NrfA, Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit [Inorganic ion transport and metabolism]	NA|327aa|up_5|NZ_CP018788.1_173256_174237_+	cd13542, PBP2_FutA1_ilke, Substrate binding domain of ferric iron-binding protein, a member of the type 2 periplasmic binding fold superfamily	NA|930aa|up_4|NZ_CP018788.1_174552_177342_+	PRK08425, flgE, flagellar hook protein FlgE; Validated	WYL|307aa|up_3|NZ_CP018788.1_177742_178663_-	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|60aa|up_2|NZ_CP018788.1_178659_178839_-	NA	NA|376aa|up_1|NZ_CP018788.1_178852_179980_-	NA	NA|471aa|up_0|NZ_CP018788.1_180019_181432_-	pfam00350, Dynamin_N, Dynamin family	NA|347aa|down_0|NZ_CP018788.1_183486_184527_-	PRK10997, yieM, ATPase RavA stimulator ViaA	NA|718aa|down_1|NZ_CP018788.1_185091_187245_-	PRK13531, PRK13531, regulatory ATPase RavA; Provisional	NA|733aa|down_2|NZ_CP018788.1_187247_189446_-	cd09912, DLP_2, Dynamin-like protein including dynamins, mitofusins, and guanylate-binding proteins	NA|570aa|down_3|NZ_CP018788.1_189458_191168_-	pfam00350, Dynamin_N, Dynamin family	NA|155aa|down_4|NZ_CP018788.1_191412_191877_-	NA	NA|55aa|down_5|NZ_CP018788.1_192261_192426_-	NA	NA|58aa|down_6|NZ_CP018788.1_192461_192635_-	NA	NA|86aa|down_7|NZ_CP018788.1_193320_193578_+	NA	NA|205aa|down_8|NZ_CP018788.1_194327_194942_+	NA	NA|77aa|down_9|NZ_CP018788.1_195042_195273_+	NA
GCF_002139915.1_ASM213991v1	NZ_CP018788	Campylobacter lanienae strain NCTC 13003 chromosome, complete genome	3	185590-185692	3	CRISPRCasFinder	no	WYL	WYL,cas4,DEDDh,cas2,cas1,cas9	Unclear	CCAGCTAGATATATCTGAGTTAAAATTT	28	0	0	NA	NA	NA	1	1	Orphan	WYL,cas4,DEDDh,cas2,cas1,cas9	NA|60aa|up_4|NZ_CP018788.1_178659_178839_-,NA|376aa|up_3|NZ_CP018788.1_178852_179980_-,NA|155aa|down_2|NZ_CP018788.1_191412_191877_-,NA|55aa|down_3|NZ_CP018788.1_192261_192426_-,NA|58aa|down_4|NZ_CP018788.1_192461_192635_-,NA|86aa|down_5|NZ_CP018788.1_193320_193578_+,NA|205aa|down_6|NZ_CP018788.1_194327_194942_+,NA|77aa|down_7|NZ_CP018788.1_195042_195273_+,NA|142aa|down_9|NZ_CP018788.1_197020_197446_+	NA|157aa|up_9|NZ_CP018788.1_170660_171131_+	TIGR03153, cytochr_NrfH, cytochrome c nitrite reductase, small subunit	NA|619aa|up_8|NZ_CP018788.1_171189_173046_+	COG3303, NrfA, Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit [Inorganic ion transport and metabolism]	NA|327aa|up_7|NZ_CP018788.1_173256_174237_+	cd13542, PBP2_FutA1_ilke, Substrate binding domain of ferric iron-binding protein, a member of the type 2 periplasmic binding fold superfamily	NA|930aa|up_6|NZ_CP018788.1_174552_177342_+	PRK08425, flgE, flagellar hook protein FlgE; Validated	WYL|307aa|up_5|NZ_CP018788.1_177742_178663_-	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|60aa|up_4|NZ_CP018788.1_178659_178839_-	NA	NA|376aa|up_3|NZ_CP018788.1_178852_179980_-	NA	NA|471aa|up_2|NZ_CP018788.1_180019_181432_-	pfam00350, Dynamin_N, Dynamin family	NA|680aa|up_1|NZ_CP018788.1_181447_183487_-	PRK13531, PRK13531, regulatory ATPase RavA; Provisional	NA|347aa|up_0|NZ_CP018788.1_183486_184527_-	PRK10997, yieM, ATPase RavA stimulator ViaA	NA|733aa|down_0|NZ_CP018788.1_187247_189446_-	cd09912, DLP_2, Dynamin-like protein including dynamins, mitofusins, and guanylate-binding proteins	NA|570aa|down_1|NZ_CP018788.1_189458_191168_-	pfam00350, Dynamin_N, Dynamin family	NA|155aa|down_2|NZ_CP018788.1_191412_191877_-	NA	NA|55aa|down_3|NZ_CP018788.1_192261_192426_-	NA	NA|58aa|down_4|NZ_CP018788.1_192461_192635_-	NA	NA|86aa|down_5|NZ_CP018788.1_193320_193578_+	NA	NA|205aa|down_6|NZ_CP018788.1_194327_194942_+	NA	NA|77aa|down_7|NZ_CP018788.1_195042_195273_+	NA	NA|338aa|down_8|NZ_CP018788.1_195256_196270_+	pfam13481, AAA_25, AAA domain	NA|142aa|down_9|NZ_CP018788.1_197020_197446_+	NA
GCF_002139915.1_ASM213991v1	NZ_CP018788	Campylobacter lanienae strain NCTC 13003 chromosome, complete genome	4	1407086-1407180	4	CRISPRCasFinder	no		WYL,cas4,DEDDh,cas2,cas1,cas9	Orphan	ACACCCTTTACAAAGTCAAAGCTC	24	0	0	NA	NA	NA	1	1	Orphan	WYL,cas4,DEDDh,cas2,cas1,cas9	NA|74aa|up_2|NZ_CP018788.1_1404821_1405043_+,NA|254aa|up_0|NZ_CP018788.1_1405595_1406357_+,NA|228aa|down_8|NZ_CP018788.1_1416607_1417291_-,NA|119aa|down_9|NZ_CP018788.1_1417691_1418048_+	NA|383aa|up_9|NZ_CP018788.1_1398212_1399361_+	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|345aa|up_8|NZ_CP018788.1_1399436_1400471_+	PRK14874, PRK14874, aspartate-semialdehyde dehydrogenase; Provisional	NA|176aa|up_7|NZ_CP018788.1_1400463_1400991_+	pfam03350, UPF0114, Uncharacterized protein family, UPF0114	NA|344aa|up_6|NZ_CP018788.1_1401006_1402038_+	PRK00115, hemE, uroporphyrinogen decarboxylase; Validated	NA|303aa|up_5|NZ_CP018788.1_1402037_1402946_+	COG0731, COG0731, Fe-S oxidoreductases [Energy production and conversion]	NA|235aa|up_4|NZ_CP018788.1_1403274_1403979_+	PRK09692, PRK09692, integrase; Provisional	NA|167aa|up_3|NZ_CP018788.1_1403969_1404470_+	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain	NA|74aa|up_2|NZ_CP018788.1_1404821_1405043_+	NA	NA|118aa|up_1|NZ_CP018788.1_1405039_1405393_+	cd04434, LanC_like, Cyclases involved in the biosynthesis of lantibiotics, and similar proteins	NA|254aa|up_0|NZ_CP018788.1_1405595_1406357_+	NA	NA|570aa|down_0|NZ_CP018788.1_1408303_1410013_-	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR	NA|224aa|down_1|NZ_CP018788.1_1410014_1410686_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|252aa|down_2|NZ_CP018788.1_1410721_1411477_-	COG1117, PstB, ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|274aa|down_3|NZ_CP018788.1_1411476_1412298_-	TIGR00974, 3a0107s02c, phosphate ABC transporter, permease protein PstA	NA|282aa|down_4|NZ_CP018788.1_1412294_1413140_-	COG0573, PstC, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]	NA|277aa|down_5|NZ_CP018788.1_1413139_1413970_-	cd13653, PBP2_phosphate_like_1, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily	NA|436aa|down_6|NZ_CP018788.1_1414132_1415440_+	cd17472, MFS_YajR_like, Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux transporters of the Major Facilitator Superfamily	NA|395aa|down_7|NZ_CP018788.1_1415426_1416611_+	cd00887, MoeA, MoeA family	NA|228aa|down_8|NZ_CP018788.1_1416607_1417291_-	NA	NA|119aa|down_9|NZ_CP018788.1_1417691_1418048_+	NA
GCF_002139915.1_ASM213991v1	NZ_CP018788	Campylobacter lanienae strain NCTC 13003 chromosome, complete genome	5	1466746-1467145	5,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas4,cas2,cas1,cas9	WYL,cas4,DEDDh,cas2,cas1,cas9	Type II-B,Type II-A,Type II-C	GTTTCAAACCGAGTTGATTTGTGGTATAATTTGCAAC,GTTTCAAACCGAGTTGATTTGTGGTATAATTTGCAAC,GTTTCAAACCGAGTTGATTTGTGGTATAATTTGCAAC	37,37,37	0	0	NA	NA	NA:NA:NA	5,5,5	5	TypeII-B,TypeII-A,TypeII-C	WYL,cas4,DEDDh,cas2,cas1,cas9	NA|94aa|up_9|NZ_CP018788.1_1456385_1456667_-,NA|182aa|down_3|NZ_CP018788.1_1469132_1469678_-	NA|94aa|up_9|NZ_CP018788.1_1456385_1456667_-	NA	NA|258aa|up_8|NZ_CP018788.1_1457226_1458000_+	PRK05701, fliR, flagellar type III secretion system protein FliR	NA|809aa|up_7|NZ_CP018788.1_1458060_1460487_+	COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only]	NA|204aa|up_6|NZ_CP018788.1_1460486_1461098_+	PRK00300, gmk, guanylate kinase; Provisional	NA|71aa|up_5|NZ_CP018788.1_1461135_1461348_+	PRK00720, tatA, twin-arginine translocase TatA/TatE family subunit	NA|532aa|up_4|NZ_CP018788.1_1461347_1462943_+	PRK01611, argS, arginyl-tRNA synthetase; Reviewed	NA|376aa|up_3|NZ_CP018788.1_1463071_1464199_-	TIGR03588, PseC, UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase	NA|187aa|up_2|NZ_CP018788.1_1464208_1464769_-	PRK00416, dcd, deoxycytidine triphosphate deaminase; Reviewed	NA|150aa|up_1|NZ_CP018788.1_1464890_1465340_+	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein	NA|446aa|up_0|NZ_CP018788.1_1465336_1466674_+	PRK08462, PRK08462, acetyl-CoA carboxylase biotin carboxylase subunit	cas4|189aa|down_0|NZ_CP018788.1_1467357_1467924_-	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas2|90aa|down_1|NZ_CP018788.1_1467924_1468194_-	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	cas1|279aa|down_2|NZ_CP018788.1_1468315_1469152_-	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	NA|182aa|down_3|NZ_CP018788.1_1469132_1469678_-	NA	NA|462aa|down_4|NZ_CP018788.1_1469794_1471180_-	pfam13395, HNH_4, HNH endonuclease	cas9|560aa|down_5|NZ_CP018788.1_1471287_1472967_-	TIGR03031, cas_csx12, CRISPR system subtype II-B RNA-guided endonuclease Cas9/Csx12	NA|109aa|down_6|NZ_CP018788.1_1473235_1473562_-	TIGR00090, rsfS_iojap_ybeB, ribosome silencing factor RsfS/YbeB/iojap	NA|183aa|down_7|NZ_CP018788.1_1473551_1474100_-	cd02165, NMNAT, Nicotinamide/nicotinate mononucleotide adenylyltransferase	NA|332aa|down_8|NZ_CP018788.1_1474156_1475152_+	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism]	NA|403aa|down_9|NZ_CP018788.1_1475153_1476362_+	PRK00073, pgk, phosphoglycerate kinase; Provisional
