The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP021112	Pseudorhodoplanes sinuspersici strain RIPI110 chromosome, complete genome	5971615	599236	638191	5971615	tail,protease,portal,head,capsid,terminase	Acidithiobacillus_phage(34.48%)	40	NA	NA
WP_086086480.1|599236_599947_+	hypothetical protein	NA	K4ICM8	Acidithiobacillus_phage	36.2	5.9e-21
WP_086086481.1|599962_600193_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086091157.1|600189_600534_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086086482.1|600543_601341_+	hypothetical protein	NA	K4HZA0	Acidithiobacillus_phage	53.1	1.5e-65
WP_086086483.1|601337_602660_+	AAA family ATPase	NA	A0A0F6SJ43	Sinorhizobium_phage	37.9	3.5e-67
WP_086086484.1|602656_605197_+	P-loop ATPase	NA	A0A2D1GN57	Marinobacter_phage	37.5	7.6e-71
WP_086086485.1|605205_606084_-	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA	NA
WP_086086486.1|606080_606899_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086086487.1|607420_607945_+	hypothetical protein	NA	K4ICN3	Acidithiobacillus_phage	58.8	8.7e-46
WP_086086488.1|607941_608262_+	ribonucleotide reductase	NA	F8TUR0	EBPR_podovirus	39.3	4.7e-10
WP_086086489.1|609176_609356_-	DUF3606 domain-containing protein	NA	NA	NA	NA	NA
WP_086086490.1|609414_610806_+	site-specific DNA-methyltransferase	NA	K4I3Y2	Acidithiobacillus_phage	60.2	8.8e-162
WP_086086491.1|610738_612043_+	site-specific DNA-methyltransferase	NA	A0A0A8ILE7	Aurantimonas_phage	50.4	1.2e-120
WP_086086492.1|612093_612660_-	DUF3489 domain-containing protein	NA	K4HZZ2	Acidithiobacillus_phage	60.0	1.2e-13
WP_086086493.1|612759_613005_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086086494.1|613023_613386_-	hypothetical protein	NA	A0A2H4JI44	uncultured_Caudovirales_phage	64.7	2.4e-39
WP_086086495.1|613507_614065_+	elements of external origin	NA	A0A2H4JCL4	uncultured_Caudovirales_phage	49.7	5.6e-35
WP_086086496.1|614012_616019_+|terminase	phage terminase large subunit family protein	terminase	A0A2H4JIC6	uncultured_Caudovirales_phage	58.1	7.1e-221
WP_086086497.1|616060_616324_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086086499.1|616403_616616_+	hypothetical protein	NA	K4HZB1	Acidithiobacillus_phage	54.3	5.8e-09
WP_086086501.1|616616_618092_+|portal	phage portal protein	portal	K4I1F2	Acidithiobacillus_phage	73.1	7.5e-196
WP_086086503.1|618084_619368_+|tail	phage tail protein	tail	K4HZZ6	Acidithiobacillus_phage	50.5	1.6e-80
WP_086086504.1|619393_619783_+|head	head decoration protein	head	K4ICP8	Acidithiobacillus_phage	59.5	4.6e-28
WP_086086506.1|619862_620885_+|capsid	major capsid protein	capsid	K4I3Z3	Acidithiobacillus_phage	57.5	2.4e-108
WP_086086508.1|620918_621236_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157699514.1|621237_621540_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086086512.1|621851_622724_-|protease	serine protease	protease	NA	NA	NA	NA
WP_086086514.1|623169_623826_+	hypothetical protein	NA	G8DH49	Emiliania_huxleyi_virus	45.2	5.6e-34
WP_086086516.1|623908_624343_+	hypothetical protein	NA	G8DH50	Emiliania_huxleyi_virus	44.8	2.7e-21
WP_086086518.1|624364_624868_+	hypothetical protein	NA	Q7Y5G7	Xanthomonas_virus	46.8	1.2e-33
WP_086086520.1|624909_625851_+	hypothetical protein	NA	G8DH51	Emiliania_huxleyi_virus	50.6	2.2e-79
WP_086086522.1|625879_626233_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086086524.1|626533_629653_+	hypothetical protein	NA	A0A0B5A0F2	Paracoccus_phage	42.3	2.9e-11
WP_086086526.1|629649_630237_+	DUF2460 domain-containing protein	NA	A0A1W6DWM9	Sphingobium_phage	43.9	3.1e-36
WP_086086528.1|630239_631079_+	DUF2163 domain-containing protein	NA	A0A1V0DY93	Dinoroseobacter_phage	43.8	3.4e-60
WP_086086530.1|631078_631510_+	peptidase P60	NA	A0A0B5A615	Paracoccus_phage	37.1	1.3e-15
WP_086086532.1|631512_632145_+	hypothetical protein	NA	M4QNR6	Tetraselmis_viridis_virus	37.6	9.5e-23
WP_086086534.1|632148_635967_+	hypothetical protein	NA	A0A0B5A7K5	Paracoccus_phage	36.0	1.4e-185
WP_086086536.1|635976_637308_+	DUF2793 domain-containing protein	NA	A0A0B5A0F6	Paracoccus_phage	34.9	3.3e-57
WP_086086538.1|637381_638191_+	glycoside hydrolase family 108 protein	NA	A0A088F6V6	Sulfitobacter_phage	42.1	4.6e-38
>prophage 2
NZ_CP021112	Pseudorhodoplanes sinuspersici strain RIPI110 chromosome, complete genome	5971615	2275253	2285070	5971615		Ectocarpus_siliculosus_virus(14.29%)	10	NA	NA
WP_086087962.1|2275253_2277752_-	PAS domain-containing sensor histidine kinase	NA	Q8QKV7	Ectocarpus_siliculosus_virus	30.7	3.5e-20
WP_086091348.1|2277935_2278352_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
WP_086087963.1|2278421_2278907_-	dUTP diphosphatase	NA	K4JSC8	Caulobacter_phage	57.7	7.0e-42
WP_086087964.1|2278894_2280112_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	28.0	2.2e-31
WP_086087965.1|2280219_2281791_-	2-polyprenylphenol 6-hydroxylase	NA	A0A2N9QVT9	Dishui_lake_phycodnavirus	27.4	1.5e-24
WP_086087966.1|2281864_2282629_-	bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA	NA	NA	NA	NA
WP_086087967.1|2282746_2283628_+	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	G3MA33	Bacillus_virus	29.0	9.5e-21
WP_086087968.1|2283647_2284142_-	low affinity iron permease family protein	NA	G1JW61	Mycobacterium_phage	43.8	6.8e-08
WP_086087969.1|2284276_2284453_+	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
WP_086087970.1|2284521_2285070_-	sigma-70 family RNA polymerase sigma factor	NA	A0A076YQ50	Rhizobium_phage	27.6	1.2e-05
>prophage 3
NZ_CP021112	Pseudorhodoplanes sinuspersici strain RIPI110 chromosome, complete genome	5971615	3909629	3931387	5971615	tail,protease,portal,head,capsid	Rhodobacter_phage(30.0%)	28	NA	NA
WP_086089328.1|3909629_3910814_+|portal	phage portal protein	portal	W8ECU7	Geobacillus_phage	41.6	9.7e-77
WP_147413450.1|3910872_3911478_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086089330.1|3911470_3911920_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086089331.1|3911974_3912160_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086089332.1|3912159_3912348_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086089333.1|3912585_3913152_+|head,protease	HK97 family phage prohead protease	head,protease	B0VK32	Azospirillum_phage	45.1	1.4e-25
WP_086089334.1|3913156_3914017_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086089335.1|3914013_3914385_+	DUF2019 domain-containing protein	NA	NA	NA	NA	NA
WP_086089336.1|3914673_3914955_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086089337.1|3915167_3916421_+|capsid	phage major capsid protein	capsid	Q3HQT0	Burkholderia_phage	42.3	2.9e-79
WP_086089338.1|3916615_3917341_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086089339.1|3917349_3917748_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086089340.1|3917769_3918525_-|protease	trypsin-like serine protease	protease	NA	NA	NA	NA
WP_086089341.1|3918675_3919644_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086089342.1|3919902_3920478_+	hypothetical protein	NA	I3UM02	Rhodobacter_phage	30.8	2.0e-11
WP_086089343.1|3920474_3920798_+|head	phage head closure protein	head	NA	NA	NA	NA
WP_086089344.1|3920971_3921379_+	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_086089345.1|3921393_3921801_+|tail	phage major tail protein, TP901-1 family	tail	NA	NA	NA	NA
WP_086089346.1|3921922_3922240_+	gene transfer agent family protein	NA	NA	NA	NA	NA
WP_086089347.1|3922236_3922467_+|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
WP_086089348.1|3922435_3923011_+|tail	phage tail tape measure protein	tail	A0A0M7QE17	Escherichia_phage	40.0	2.9e-10
WP_086089349.1|3923020_3923254_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086089350.1|3923345_3923990_+	DUF2460 domain-containing protein	NA	A0A0K1Y6G4	Rhodobacter_phage	53.4	1.8e-53
WP_086089351.1|3924152_3925049_+	DUF2163 domain-containing protein	NA	A0A0K0PVK1	Roseobacter_phage	41.5	2.1e-63
WP_086089352.1|3925053_3925521_+	peptidase P60	NA	F4YXU4	Roseobacter_phage	46.5	8.6e-29
WP_086089353.1|3925520_3929408_+	hypothetical protein	NA	A0A0B5A7K5	Paracoccus_phage	39.9	1.8e-233
WP_086089354.1|3929410_3929878_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157699679.1|3929941_3931387_+	DUF2793 domain-containing protein	NA	A0A0K1Y6G9	Rhodobacter_phage	39.3	9.5e-34
>prophage 4
NZ_CP021112	Pseudorhodoplanes sinuspersici strain RIPI110 chromosome, complete genome	5971615	4558479	4567885	5971615		uncultured_Mediterranean_phage(50.0%)	8	NA	NA
WP_086089905.1|4558479_4561182_+	DNA ligase D	NA	A0A068CDF3	Rhizobium_phage	38.6	1.8e-54
WP_086089906.1|4561381_4561873_+	single-stranded DNA-binding protein	NA	R9TP78	Rhizobium_phage	59.0	2.8e-46
WP_086089907.1|4561884_4562508_-	MarC family protein	NA	NA	NA	NA	NA
WP_086089908.1|4562656_4565416_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	32.7	8.2e-95
WP_086089909.1|4565506_4566106_+	DUF4337 domain-containing protein	NA	NA	NA	NA	NA
WP_086089910.1|4566270_4566768_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	35.0	2.8e-25
WP_086089911.1|4566807_4567353_+	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	52.9	2.2e-36
WP_086089912.1|4567420_4567885_+	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	53.4	5.5e-36
>prophage 5
NZ_CP021112	Pseudorhodoplanes sinuspersici strain RIPI110 chromosome, complete genome	5971615	4667770	4676988	5971615		Synechococcus_phage(16.67%)	10	NA	NA
WP_086089994.1|4667770_4668457_+	Fe2+-dependent dioxygenase	NA	Q5GQB0	Synechococcus_phage	34.0	3.9e-14
WP_086089995.1|4668453_4669398_+	sel1 repeat family protein	NA	NA	NA	NA	NA
WP_086089996.1|4669499_4669802_-	HU family DNA-binding protein	NA	A0A0H3UZA0	Geobacillus_virus	50.0	2.3e-14
WP_086089997.1|4670277_4670478_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086089998.1|4670705_4670924_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086089999.1|4670968_4671355_-	hypothetical protein	NA	A0A1V0SJQ6	Klosneuvirus	43.8	1.5e-07
WP_086090000.1|4671351_4672689_-	hypothetical protein	NA	A0A248SJN2	Salicola_phage	24.3	3.5e-06
WP_086090001.1|4672625_4673663_-	AAA domain-containing protein	NA	H6WG28	Cyanophage	32.6	3.2e-23
WP_086090002.1|4673889_4675605_+	sulfatase-like hydrolase/transferase	NA	NA	NA	NA	NA
WP_086090003.1|4675611_4676988_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	34.4	3.4e-65
>prophage 6
NZ_CP021112	Pseudorhodoplanes sinuspersici strain RIPI110 chromosome, complete genome	5971615	4902805	4915468	5971615	tRNA	uncultured_Mediterranean_phage(81.82%)	13	NA	NA
WP_086091628.1|4902805_4903150_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	41.8	9.8e-14
WP_086090182.1|4903350_4904289_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_086090183.1|4904399_4905872_-	peptidoglycan DD-metalloendopeptidase family protein	NA	Q8SBN9	Clostridium_phage	40.1	7.9e-20
WP_086090184.1|4906127_4906775_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	47.7	2.0e-31
WP_086090185.1|4906970_4907735_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	38.0	2.2e-34
WP_086090186.1|4907858_4909139_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	48.5	2.0e-104
WP_086090187.1|4909587_4910397_-	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	43.4	1.9e-47
WP_086090188.1|4910393_4910897_-	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_086090189.1|4910978_4911221_-	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	56.8	3.1e-06
WP_086090190.1|4911297_4912410_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.4e-30
WP_086091629.1|4912410_4913139_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	48.8	1.4e-46
WP_086090191.1|4913621_4914440_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	30.3	3.7e-27
WP_086090192.1|4914439_4915468_-	beta-N-acetylhexosaminidase	NA	A0A1B1IVS3	uncultured_Mediterranean_phage	42.6	1.6e-22
>prophage 7
NZ_CP021112	Pseudorhodoplanes sinuspersici strain RIPI110 chromosome, complete genome	5971615	5001043	5029281	5971615	tail,protease,portal,head,integrase,capsid,terminase	Brucella_phage(15.38%)	35	4994092:4994107	5024756:5024771
4994092:4994107	attL	AAGCGAGTTCAGCGAG	NA	NA	NA	NA
WP_086090255.1|5001043_5002162_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_086090256.1|5002164_5002416_+	hypothetical protein	NA	W6E8K1	Rhizobium_phage	52.2	8.7e-12
WP_157699727.1|5002408_5002840_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086090258.1|5002839_5003970_+	site-specific DNA-methyltransferase	NA	A0A1B0VM49	Pseudomonas_phage	47.5	1.5e-79
WP_120265363.1|5004007_5004226_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086090260.1|5004242_5004440_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086090261.1|5004756_5005479_+	hypothetical protein	NA	A0A2I2MUH3	uncultured_Caudovirales_phage	44.9	1.1e-30
WP_086090262.1|5005511_5005796_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157699728.1|5005820_5005991_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086090263.1|5006026_5006248_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086090264.1|5006442_5006700_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086090265.1|5006701_5006896_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086090266.1|5006909_5007110_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086090267.1|5007169_5007553_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086090268.1|5007736_5008123_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086090269.1|5008369_5008777_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086090270.1|5008776_5009454_-	M15 family metallopeptidase	NA	R9TH33	Synechococcus_phage	59.8	3.3e-45
WP_086090271.1|5009481_5009703_-	hypothetical protein	NA	NA	NA	NA	NA
WP_120265364.1|5009699_5010098_-	hypothetical protein	NA	NA	NA	NA	NA
WP_147413522.1|5010365_5012597_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086090274.1|5012635_5014981_-	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA	NA
WP_086090276.1|5017394_5018201_-	hypothetical protein	NA	I6RTS1	Marinomonas_phage	31.2	6.7e-29
WP_147413524.1|5018210_5020232_-	hypothetical protein	NA	A0A0U2BXT9	Paracoccus_phage	45.6	3.2e-48
WP_086090278.1|5020244_5020451_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086090279.1|5020516_5020885_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086090280.1|5020895_5021588_-	hypothetical protein	NA	A0A0H4INV0	Stenotrophomonas_phage	39.5	7.5e-13
WP_086090281.1|5021658_5022105_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086090282.1|5022122_5022539_-	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_086090283.1|5022538_5022916_-|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
WP_157699729.1|5022915_5023518_-	hypothetical protein	NA	A0A141GEW4	Brucella_phage	36.1	7.2e-28
WP_086090285.1|5023578_5024010_-	hypothetical protein	NA	B0VK34	Azospirillum_phage	59.3	1.5e-35
WP_086090286.1|5024087_5025413_-|capsid	phage major capsid protein	capsid	A0A141GEW2	Brucella_phage	43.2	6.8e-87
5024756:5024771	attR	AAGCGAGTTCAGCGAG	NA	NA	NA	NA
WP_086090287.1|5025422_5026274_-|protease	Clp protease ClpP	protease	Q3HQS9	Burkholderia_phage	48.4	2.4e-61
WP_086090288.1|5026251_5027526_-|portal	phage portal protein	portal	Q8W629	Enterobacteria_phage	35.6	1.5e-62
WP_086090289.1|5027535_5029281_-|terminase	terminase large subunit	terminase	Q6DMU3	Streptococcus_phage	37.4	8.3e-93
