assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002119445.1_ASM211944v1	NZ_CP021061	Bacillus thuringiensis strain ATCC 10792 chromosome, complete genome	1	957278-957393	1	CRISPRCasFinder	no		cas3,csa3,RT,WYL,c2c9_V-U4,DinG,cas14k,DEDDh	Orphan	GGTTTAAATACGTTAAATAGCAAAACAGGTGA	32	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,RT,WYL,c2c9_V-U4,DinG,cas14k,DEDDh,cas14j,Cas14u_CAS-V	NA|100aa|up_4|NZ_CP021061.1_951676_951976_+,NA|285aa|up_3|NZ_CP021061.1_952061_952916_-,NA|71aa|down_0|NZ_CP021061.1_959294_959507_+,NA|143aa|down_8|NZ_CP021061.1_964291_964720_+	NA|349aa|up_9|NZ_CP021061.1_944095_945142_+	PRK00115, hemE, uroporphyrinogen decarboxylase; Validated	NA|312aa|up_8|NZ_CP021061.1_945156_946092_+	PRK12435, PRK12435, ferrochelatase; Provisional	NA|474aa|up_7|NZ_CP021061.1_946111_947533_+	PRK11883, PRK11883, protoporphyrinogen oxidase; Reviewed	NA|451aa|up_6|NZ_CP021061.1_947584_948937_-	pfam13218, DUF4026, Protein of unknown function (DUF4026)	NA|789aa|up_5|NZ_CP021061.1_949178_951545_+	COG2374, COG2374, Predicted extracellular nuclease [General function prediction only]	NA|100aa|up_4|NZ_CP021061.1_951676_951976_+	NA	NA|285aa|up_3|NZ_CP021061.1_952061_952916_-	NA	NA|134aa|up_2|NZ_CP021061.1_953145_953547_+	pfam03965, Penicillinase_R, Penicillinase repressor	NA|646aa|up_1|NZ_CP021061.1_953549_955487_+	pfam05569, Peptidase_M56, BlaR1 peptidase M56	NA|191aa|up_0|NZ_CP021061.1_955758_956331_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|71aa|down_0|NZ_CP021061.1_959294_959507_+	NA	NA|102aa|down_1|NZ_CP021061.1_959510_959816_+	COG3860, COG3860, Uncharacterized protein conserved in bacteria [Function unknown]	NA|118aa|down_2|NZ_CP021061.1_959842_960196_-	pfam14470, bPH_3, Bacterial PH domain	NA|170aa|down_3|NZ_CP021061.1_960329_960839_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|338aa|down_4|NZ_CP021061.1_961033_962047_+	COG1609, PurR, Transcriptional regulators [Transcription]	NA|43aa|down_5|NZ_CP021061.1_962086_962215_-	pfam14149, YhfH, YhfH-like protein	NA|245aa|down_6|NZ_CP021061.1_962418_963153_+	cd07716, RNaseZ_short-form-like_MBL-fold, uncharacterized bacterial subgroup of Ribonuclease Z, short form; MBL-fold metallo-hydrolase domain	NA|330aa|down_7|NZ_CP021061.1_963162_964152_+	TIGR00545, Probable_lipoate-protein_ligase_A, lipoyltransferase and lipoate-protein ligase	NA|143aa|down_8|NZ_CP021061.1_964291_964720_+	NA	NA|511aa|down_9|NZ_CP021061.1_964881_966414_+	PRK07656, PRK07656, long-chain-fatty-acid--CoA ligase; Validated
GCF_002119445.1_ASM211944v1	NZ_CP021061	Bacillus thuringiensis strain ATCC 10792 chromosome, complete genome	2	3276083-3276193	2	CRISPRCasFinder	no	csa3	cas3,csa3,RT,WYL,c2c9_V-U4,DinG,cas14k,DEDDh	Type I-A	TACCGGAATTGGAATAACTGGTCCTAC	27	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,RT,WYL,c2c9_V-U4,DinG,cas14k,DEDDh,cas14j,Cas14u_CAS-V	NA,NA|77aa|down_9|NZ_CP021061.1_3289137_3289368_+	NA|346aa|up_9|NZ_CP021061.1_3266199_3267237_-	pfam13170, DUF4003, Protein of unknown function (DUF4003)	NA|152aa|up_8|NZ_CP021061.1_3267429_3267885_-	pfam12867, DinB_2, DinB superfamily	NA|163aa|up_7|NZ_CP021061.1_3268077_3268566_+	pfam05163, DinB, DinB family	NA|159aa|up_6|NZ_CP021061.1_3268679_3269156_-	pfam10901, DUF2690, Protein of unknown function (DUF2690)	NA|171aa|up_5|NZ_CP021061.1_3269173_3269686_-	pfam10901, DUF2690, Protein of unknown function (DUF2690)	NA|298aa|up_4|NZ_CP021061.1_3269986_3270880_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|322aa|up_3|NZ_CP021061.1_3271003_3271969_+	cd05286, QOR2, Quinone oxidoreductase (QOR)	NA|237aa|up_2|NZ_CP021061.1_3272034_3272745_-	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|175aa|up_1|NZ_CP021061.1_3272905_3273430_-	COG3153, COG3153, Predicted acetyltransferase [General function prediction only]	NA|634aa|up_0|NZ_CP021061.1_3273436_3275338_-	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed	NA|514aa|down_0|NZ_CP021061.1_3276772_3278314_-	PRK09441, PRK09441, cytoplasmic alpha-amylase; Reviewed	NA|264aa|down_1|NZ_CP021061.1_3278517_3279309_+	pfam00797, Acetyltransf_2, N-acetyltransferase	NA|349aa|down_2|NZ_CP021061.1_3281260_3282307_-	pfam04371, PAD_porph, Porphyromonas-type peptidyl-arginine deiminase	NA|274aa|down_3|NZ_CP021061.1_3282494_3283316_-	cd01107, HTH_BmrR, Helix-Turn-Helix DNA binding domain of the BmrR transcription regulator	NA|326aa|down_4|NZ_CP021061.1_3283358_3284336_-	pfam04371, PAD_porph, Porphyromonas-type peptidyl-arginine deiminase	NA|311aa|down_5|NZ_CP021061.1_3284567_3285500_-	COG3781, COG3781, Predicted membrane protein [Function unknown]	NA|139aa|down_6|NZ_CP021061.1_3285680_3286097_-	PRK02833, PRK02833, phosphate-starvation-inducible protein PsiE; Provisional	NA|386aa|down_7|NZ_CP021061.1_3286265_3287423_-	pfam04371, PAD_porph, Porphyromonas-type peptidyl-arginine deiminase	NA|376aa|down_8|NZ_CP021061.1_3287752_3288880_-	pfam00144, Beta-lactamase, Beta-lactamase	NA|77aa|down_9|NZ_CP021061.1_3289137_3289368_+	NA
GCF_002119445.1_ASM211944v1	NZ_CP021061	Bacillus thuringiensis strain ATCC 10792 chromosome, complete genome	3	3524082-3524666	1	CRT	no		cas3,csa3,RT,WYL,c2c9_V-U4,DinG,cas14k,DEDDh	Orphan	CGCTACNGGCGCTACCGG	18	2	2	3524136-3524153|3524613-3524648	NZ_CP021061.1_3524658-3524675|NZ_CP021061.1_3524658-3524693	NA	14	14	Orphan	cas3,csa3,RT,WYL,c2c9_V-U4,DinG,cas14k,DEDDh,cas14j,Cas14u_CAS-V	NA|46aa|up_2|NZ_CP021061.1_3521112_3521250_+,NA|82aa|down_3|NZ_CP021061.1_3528706_3528952_+	NA|181aa|up_9|NZ_CP021061.1_3514334_3514877_-	pfam08006, DUF1700, Protein of unknown function (DUF1700)	NA|108aa|up_8|NZ_CP021061.1_3514869_3515193_-	COG1695, COG1695, Predicted transcriptional regulators [Transcription]	NA|445aa|up_7|NZ_CP021061.1_3515811_3517146_-	TIGR00653, Glutamine_synthetase, glutamine synthetase, type I	NA|130aa|up_6|NZ_CP021061.1_3517194_3517584_-	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators	NA|424aa|up_5|NZ_CP021061.1_3517758_3519030_-	pfam06838, Met_gamma_lyase, Methionine gamma-lyase	NA|425aa|up_4|NZ_CP021061.1_3519022_3520297_-	TIGR03156, GTP_HflX, GTP-binding protein HflX	NA|208aa|up_3|NZ_CP021061.1_3520389_3521013_+	COG2860, COG2860, Predicted membrane protein [Function unknown]	NA|46aa|up_2|NZ_CP021061.1_3521112_3521250_+	NA	NA|319aa|up_1|NZ_CP021061.1_3521281_3522238_-	TIGR02881, Stage_V_sporulation_protein_K, stage V sporulation protein K	NA|322aa|up_0|NZ_CP021061.1_3522502_3523468_+	cd00397, DNA_BRE_C, DNA breaking-rejoining enzymes, C-terminal catalytic domain	NA|452aa|down_0|NZ_CP021061.1_3525878_3527233_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|75aa|down_1|NZ_CP021061.1_3527325_3527550_-	PRK00395, hfq, RNA-binding protein Hfq; Provisional	NA|318aa|down_2|NZ_CP021061.1_3527571_3528525_-	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed	NA|82aa|down_3|NZ_CP021061.1_3528706_3528952_+	NA	NA|311aa|down_4|NZ_CP021061.1_3529014_3529947_-	COG3584, COG3584, Uncharacterized protein conserved in bacteria [Function unknown]	NA|619aa|down_5|NZ_CP021061.1_3530296_3532153_-	PRK10712, PRK10712, PTS system fructose-specific transporter subunits IIBC; Provisional	NA|304aa|down_6|NZ_CP021061.1_3532166_3533078_-	cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases	NA|251aa|down_7|NZ_CP021061.1_3533074_3533827_-	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|388aa|down_8|NZ_CP021061.1_3533986_3535150_-	cd08187, BDH, Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process	NA|181aa|down_9|NZ_CP021061.1_3535267_3535810_-	COG2322, COG2322, Predicted membrane protein [Function unknown]
GCF_002119445.1_ASM211944v1	NZ_CP021061	Bacillus thuringiensis strain ATCC 10792 chromosome, complete genome	4	3524748-3525296	2	CRT	no		cas3,csa3,RT,WYL,c2c9_V-U4,DinG,cas14k,DEDDh	Orphan	NGCTACTGGACCTCAAGG	18	1	1	3525081-3525098	NZ_CP021061.1_3524676-3524693	NA	12	12	Orphan	cas3,csa3,RT,WYL,c2c9_V-U4,DinG,cas14k,DEDDh,cas14j,Cas14u_CAS-V	NA|46aa|up_2|NZ_CP021061.1_3521112_3521250_+,NA|82aa|down_3|NZ_CP021061.1_3528706_3528952_+	NA|181aa|up_9|NZ_CP021061.1_3514334_3514877_-	pfam08006, DUF1700, Protein of unknown function (DUF1700)	NA|108aa|up_8|NZ_CP021061.1_3514869_3515193_-	COG1695, COG1695, Predicted transcriptional regulators [Transcription]	NA|445aa|up_7|NZ_CP021061.1_3515811_3517146_-	TIGR00653, Glutamine_synthetase, glutamine synthetase, type I	NA|130aa|up_6|NZ_CP021061.1_3517194_3517584_-	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators	NA|424aa|up_5|NZ_CP021061.1_3517758_3519030_-	pfam06838, Met_gamma_lyase, Methionine gamma-lyase	NA|425aa|up_4|NZ_CP021061.1_3519022_3520297_-	TIGR03156, GTP_HflX, GTP-binding protein HflX	NA|208aa|up_3|NZ_CP021061.1_3520389_3521013_+	COG2860, COG2860, Predicted membrane protein [Function unknown]	NA|46aa|up_2|NZ_CP021061.1_3521112_3521250_+	NA	NA|319aa|up_1|NZ_CP021061.1_3521281_3522238_-	TIGR02881, Stage_V_sporulation_protein_K, stage V sporulation protein K	NA|322aa|up_0|NZ_CP021061.1_3522502_3523468_+	cd00397, DNA_BRE_C, DNA breaking-rejoining enzymes, C-terminal catalytic domain	NA|452aa|down_0|NZ_CP021061.1_3525878_3527233_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|75aa|down_1|NZ_CP021061.1_3527325_3527550_-	PRK00395, hfq, RNA-binding protein Hfq; Provisional	NA|318aa|down_2|NZ_CP021061.1_3527571_3528525_-	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed	NA|82aa|down_3|NZ_CP021061.1_3528706_3528952_+	NA	NA|311aa|down_4|NZ_CP021061.1_3529014_3529947_-	COG3584, COG3584, Uncharacterized protein conserved in bacteria [Function unknown]	NA|619aa|down_5|NZ_CP021061.1_3530296_3532153_-	PRK10712, PRK10712, PTS system fructose-specific transporter subunits IIBC; Provisional	NA|304aa|down_6|NZ_CP021061.1_3532166_3533078_-	cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases	NA|251aa|down_7|NZ_CP021061.1_3533074_3533827_-	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|388aa|down_8|NZ_CP021061.1_3533986_3535150_-	cd08187, BDH, Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process	NA|181aa|down_9|NZ_CP021061.1_3535267_3535810_-	COG2322, COG2322, Predicted membrane protein [Function unknown]
GCF_002119445.1_ASM211944v1	NZ_CP021061	Bacillus thuringiensis strain ATCC 10792 chromosome, complete genome	5	5122499-5122632	3	CRISPRCasFinder	no		cas3,csa3,RT,WYL,c2c9_V-U4,DinG,cas14k,DEDDh	Orphan	GTTGATTTCTCTTCTTTTTGAGA	23	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,RT,WYL,c2c9_V-U4,DinG,cas14k,DEDDh,cas14j,Cas14u_CAS-V	NA|45aa|up_0|NZ_CP021061.1_5122030_5122165_-,NA	NA|227aa|up_9|NZ_CP021061.1_5114009_5114690_-	pfam02397, Bac_transf, Bacterial sugar transferase	NA|294aa|up_8|NZ_CP021061.1_5114708_5115590_-	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]	NA|256aa|up_7|NZ_CP021061.1_5115831_5116599_-	COG4464, CapC, Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|234aa|up_6|NZ_CP021061.1_5116706_5117408_-	cd05387, BY-kinase, bacterial tyrosine-kinase	NA|248aa|up_5|NZ_CP021061.1_5117397_5118141_-	COG3944, COG3944, Capsular polysaccharide biosynthesis protein [Cell envelope biogenesis, outer membrane]	NA|226aa|up_4|NZ_CP021061.1_5118401_5119079_-	cd05387, BY-kinase, bacterial tyrosine-kinase	NA|145aa|up_3|NZ_CP021061.1_5119423_5119858_-	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ	NA|334aa|up_2|NZ_CP021061.1_5120287_5121289_-	PRK13928, PRK13928, rod shape-determining protein Mbl; Provisional	NA|91aa|up_1|NZ_CP021061.1_5121449_5121722_-	pfam12116, SpoIIID, Stage III sporulation protein D	NA|45aa|up_0|NZ_CP021061.1_5122030_5122165_-	NA	NA|235aa|down_0|NZ_CP021061.1_5123519_5124224_-	pfam12679, ABC2_membrane_2, ABC-2 family transporter protein	NA|281aa|down_1|NZ_CP021061.1_5124223_5125066_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|336aa|down_2|NZ_CP021061.1_5125247_5126255_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|340aa|down_3|NZ_CP021061.1_5126354_5127374_-	TIGR02870, Stage_II_sporulation_protein_D, stage II sporulation protein D	NA|435aa|down_4|NZ_CP021061.1_5127581_5128886_-	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated	NA|237aa|down_5|NZ_CP021061.1_5128925_5129636_-	pfam08680, DUF1779, TATA-box binding	NA|79aa|down_6|NZ_CP021061.1_5129680_5129917_-	COG4836, COG4836, Predicted membrane protein [Function unknown]	NA|507aa|down_7|NZ_CP021061.1_5130119_5131640_-	PRK05777, PRK05777, NADH-quinone oxidoreductase subunit NuoN	NA|501aa|down_8|NZ_CP021061.1_5131641_5133144_-	PRK05846, PRK05846, NADH:ubiquinone oxidoreductase subunit M; Reviewed	NA|621aa|down_9|NZ_CP021061.1_5133140_5135003_-	PRK06590, PRK06590, NADH:ubiquinone oxidoreductase subunit L; Reviewed
GCF_002119445.1_ASM211944v1	NZ_CP021062	Bacillus thuringiensis strain ATCC 10792 plasmid poh1, complete sequence	1	164906-164982	1	CRISPRCasFinder	no	RT,cas14j,csa3	RT,cas14j,csa3,Cas14u_CAS-V	Type I-A	ATCAGAGAAAGAATTAGTAAAAGAATTAG	29	1	1	164935-164953	NZ_CP021062.1_164971-164989	NA	1	1	TypeV,TypeI-A	cas3,csa3,RT,WYL,c2c9_V-U4,DinG,cas14k,DEDDh,cas14j,Cas14u_CAS-V	NA,NA|192aa|down_0|NZ_CP021062.1_165322_165898_-,NA|150aa|down_2|NZ_CP021062.1_167124_167574_-,NA|199aa|down_3|NZ_CP021062.1_167850_168447_+,NA|92aa|down_6|NZ_CP021062.1_170657_170933_-	NA|406aa|up_9|NZ_CP021062.1_148244_149462_-	TIGR01426, Glycosyl_transferase, glycosyltransferase, MGT family	NA|390aa|up_8|NZ_CP021062.1_150230_151400_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|256aa|up_7|NZ_CP021062.1_151711_152479_-	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA	NA|309aa|up_6|NZ_CP021062.1_152453_153380_-	pfam10026, DUF2268, Predicted Zn-dependent protease (DUF2268)	RT|436aa|up_5|NZ_CP021062.1_155407_156715_+	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|476aa|up_4|NZ_CP021062.1_157594_159022_+	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|308aa|up_3|NZ_CP021062.1_159167_160091_+	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|152aa|up_2|NZ_CP021062.1_160667_161123_-	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|385aa|up_1|NZ_CP021062.1_161398_162553_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|404aa|up_0|NZ_CP021062.1_162710_163922_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|192aa|down_0|NZ_CP021062.1_165322_165898_-	NA	NA|173aa|down_1|NZ_CP021062.1_166476_166995_-	pfam00386, C1q, C1q domain	NA|150aa|down_2|NZ_CP021062.1_167124_167574_-	NA	NA|199aa|down_3|NZ_CP021062.1_167850_168447_+	NA	NA|55aa|down_4|NZ_CP021062.1_169215_169380_-	cd13831, HU, histone-like DNA-binding protein HU	NA|93aa|down_5|NZ_CP021062.1_169773_170052_+	pfam18277, AbrB_C, AbrB C-terminal domain	NA|92aa|down_6|NZ_CP021062.1_170657_170933_-	NA	NA|137aa|down_7|NZ_CP021062.1_170981_171392_-	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|442aa|down_8|NZ_CP021062.1_171850_173176_+	TIGR04463, Radical_SAM_domain_protein, radical SAM/SPASM domain protein maturase	NA|398aa|down_9|NZ_CP021062.1_173312_174506_-	pfam01548, DEDD_Tnp_IS110, Transposase
