The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP021030	Rhizobium sp. NXC14 chromosome, complete genome	4494223	1620770	1629992	4494223		Aeromonas_phage(14.29%)	9	NA	NA
WP_085777703.1|1620770_1622069_+	serine hydroxymethyltransferase	NA	A0A219Y950	Aeromonas_phage	51.0	1.9e-97
WP_003547190.1|1622078_1622555_+	transcriptional repressor NrdR	NA	NA	NA	NA	NA
WP_085777704.1|1622558_1623869_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	39.9	1.2e-32
WP_085777705.1|1623868_1624480_+	riboflavin synthase	NA	A0A2I2L4R9	Orpheovirus	35.4	2.0e-17
WP_085777706.1|1624596_1625466_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	K7QKA7	Escherichia_phage	59.2	9.8e-95
WP_085777707.1|1625476_1626364_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
WP_085777708.1|1626367_1627423_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	51.8	1.8e-95
WP_085777709.1|1627429_1628008_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A218MN57	uncultured_virus	43.4	2.4e-33
WP_085780032.1|1627997_1629992_-	hypothetical protein	NA	A0A0G2Y9S0	Acanthamoeba_polyphaga_mimivirus	25.9	3.0e-06
>prophage 2
NZ_CP021030	Rhizobium sp. NXC14 chromosome, complete genome	4494223	1942590	2007062	4494223	terminase,transposase,tail,tRNA,integrase,capsid	Rhizobium_phage(75.47%)	69	1956563:1956578	2015082:2015097
WP_085780050.1|1942590_1943604_+	beta-N-acetylhexosaminidase	NA	A0A1B1IVS3	uncultured_Mediterranean_phage	41.9	4.8e-24
WP_085780051.1|1943622_1944480_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	37.2	1.6e-33
WP_085777929.1|1944476_1945181_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	48.8	2.3e-41
WP_085777930.1|1945363_1945555_+	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	72.1	3.4e-08
WP_085777931.1|1945606_1946221_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_085777932.1|1946217_1947045_+	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	46.1	5.2e-53
WP_085777933.1|1947135_1948419_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	45.8	1.4e-97
WP_085777934.1|1948423_1949197_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	30.2	4.0e-23
WP_085777935.1|1949193_1949847_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	35.3	8.1e-17
WP_085777936.1|1950031_1951621_+	peptidoglycan DD-metalloendopeptidase family protein	NA	I3PV24	Clostridium_phage	29.2	6.6e-12
WP_085780052.1|1951710_1952583_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_064696006.1|1952788_1953136_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	38.0	3.2e-12
WP_085777937.1|1953181_1955713_+	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	49.0	2.1e-57
WP_085777938.1|1955717_1956104_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085777939.1|1956106_1956964_+	phytoene/squalene synthase family protein	NA	NA	NA	NA	NA
1956563:1956578	attL	TCGGCAGATGCCGCCG	NA	NA	NA	NA
WP_085777940.1|1957035_1957503_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085777941.1|1957512_1958946_-|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	tRNA	NA	NA	NA	NA
WP_085777942.1|1959051_1959195_-	DUF1127 domain-containing protein	NA	NA	NA	NA	NA
WP_004678838.1|1959493_1959640_-	DUF1127 domain-containing protein	NA	NA	NA	NA	NA
WP_085777943.1|1960524_1961619_+	DUF2157 domain-containing protein	NA	NA	NA	NA	NA
WP_085777944.1|1961615_1962206_+	GDYXXLXY domain-containing protein	NA	NA	NA	NA	NA
WP_085777945.1|1962702_1965279_+	hypothetical protein	NA	L7TQW5	Rhizobium_phage	93.4	0.0e+00
WP_157131385.1|1965431_1965593_+	hypothetical protein	NA	L7TJ64	Rhizobium_phage	94.3	7.7e-22
WP_085777946.1|1965608_1966286_+	hypothetical protein	NA	L7TML1	Rhizobium_phage	81.7	1.6e-108
WP_157131386.1|1966285_1966462_+	hypothetical protein	NA	L7TK99	Rhizobium_phage	91.4	3.7e-25
WP_085777947.1|1966494_1967292_+	hypothetical protein	NA	L7TQX0	Rhizobium_phage	65.4	7.6e-94
WP_085777948.1|1967377_1968088_+	DUF2815 family protein	NA	L7TLT1	Rhizobium_phage	96.6	1.5e-125
WP_085777949.1|1968095_1968506_+	endodeoxyribonuclease	NA	L7TJ68	Rhizobium_phage	97.8	1.2e-74
WP_157131387.1|1968498_1969119_+	LysM peptidoglycan-binding domain-containing protein	NA	L7TML5	Rhizobium_phage	97.0	2.6e-113
WP_085777950.1|1969213_1969891_+	hypothetical protein	NA	L7TKA4	Rhizobium_phage	68.1	3.1e-80
WP_157131388.1|1969887_1970058_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085777951.1|1970054_1970255_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085777952.1|1970251_1970434_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085777953.1|1970437_1972057_+	AAA family ATPase	NA	L7TLT7	Rhizobium_phage	94.5	5.4e-272
WP_157131448.1|1972225_1974190_+	DNA polymerase	NA	L7TJ71	Rhizobium_phage	92.4	0.0e+00
WP_085777955.1|1974193_1974400_+	hypothetical protein	NA	L7TML7	Rhizobium_phage	95.6	1.5e-30
WP_085777956.1|1974472_1974874_+	hypothetical protein	NA	L7TKA9	Rhizobium_phage	94.7	2.4e-64
WP_085777957.1|1974873_1975071_+	hypothetical protein	NA	L7TQX7	Rhizobium_phage	93.8	5.9e-32
WP_085777958.1|1975063_1975822_+	hypothetical protein	NA	L7TLU4	Rhizobium_phage	94.0	3.1e-137
WP_157131389.1|1975806_1976505_+	hypothetical protein	NA	L7TJ75	Rhizobium_phage	84.9	3.6e-87
WP_085777960.1|1976529_1977006_+	hypothetical protein	NA	L7TMM1	Rhizobium_phage	78.0	1.8e-21
WP_157131390.1|1977002_1977161_+	hypothetical protein	NA	L7TKB4	Rhizobium_phage	94.2	2.1e-19
WP_085777963.1|1977655_1979209_+|tail	phage tail protein	tail	L7TJ79	Rhizobium_phage	92.6	1.1e-264
WP_085777964.1|1979328_1979838_+	hypothetical protein	NA	L7TKB9	Rhizobium_phage	75.7	1.3e-54
WP_085777965.1|1979847_1980612_+	hypothetical protein	NA	L7TQY4	Rhizobium_phage	80.9	1.5e-107
WP_085777966.1|1980621_1980852_+	hypothetical protein	NA	L7TLV7	Rhizobium_phage	97.4	7.7e-31
WP_085777967.1|1981194_1982172_+|capsid	capsid protein	capsid	L7TJ83	Rhizobium_phage	97.2	5.2e-177
WP_085777968.1|1982241_1982553_+	hypothetical protein	NA	NA	NA	NA	NA
WP_085780053.1|1983453_1984953_+|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
WP_085777969.1|1984952_1985687_+	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	33.7	7.7e-32
WP_085777970.1|1986749_1987361_+|tail	phage tail protein	tail	L7TQY6	Rhizobium_phage	94.6	6.2e-104
WP_085777971.1|1987360_1989742_+	hypothetical protein	NA	L7TLW2	Rhizobium_phage	93.2	0.0e+00
WP_085777972.1|1989741_1990206_+	hypothetical protein	NA	L7TJ86	Rhizobium_phage	72.7	2.6e-62
WP_085777973.1|1990198_1990738_+	hypothetical protein	NA	L7TMN3	Rhizobium_phage	77.1	4.3e-64
WP_085777974.1|1990737_1992747_+	hypothetical protein	NA	L7TKC9	Rhizobium_phage	93.5	0.0e+00
WP_085777975.1|1992756_1996530_+	transglycosylase SLT domain-containing protein	NA	L7TQZ1	Rhizobium_phage	94.1	0.0e+00
WP_085777976.1|1996593_1997841_+	hypothetical protein	NA	L7TLW7	Rhizobium_phage	87.2	3.1e-150
WP_085777977.1|1997843_1998434_+	hypothetical protein	NA	L7TMN7	Rhizobium_phage	86.9	2.9e-42
WP_085777978.1|1998433_1998682_+	hypothetical protein	NA	L7TKD4	Rhizobium_phage	100.0	3.6e-34
WP_085777979.1|1998681_1998903_+	hypothetical protein	NA	L7TQZ6	Rhizobium_phage	97.3	3.0e-32
WP_085777980.1|1999028_2000717_+|terminase	phage terminase large subunit	terminase	L7TLX3	Rhizobium_phage	96.4	0.0e+00
WP_085777981.1|2000961_2001375_+	hypothetical protein	NA	L7TJ94	Rhizobium_phage	97.8	8.9e-70
WP_157131391.1|2001852_2002707_-	hypothetical protein	NA	L7TR00	Rhizobium_phage	88.5	4.1e-77
WP_085777983.1|2003374_2004142_+	hypothetical protein	NA	A0A076YL19	Mesorhizobium_phage	64.7	3.1e-84
WP_157131392.1|2004248_2004467_+	hypothetical protein	NA	L7TQW1	Rhizobium_phage	97.2	1.0e-32
WP_085777985.1|2004469_2004694_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157131393.1|2004693_2004858_+	hypothetical protein	NA	L7TLR9	Rhizobium_phage	94.4	3.5e-22
WP_085777986.1|2005568_2005955_+	winged helix-turn-helix transcriptional regulator	NA	L7TMK8	Rhizobium_phage	97.7	4.1e-61
WP_157131394.1|2006045_2007062_+|integrase	site-specific integrase	integrase	L7TK95	Rhizobium_phage	82.2	2.2e-162
2015082:2015097	attR	TCGGCAGATGCCGCCG	NA	NA	NA	NA
>prophage 3
NZ_CP021030	Rhizobium sp. NXC14 chromosome, complete genome	4494223	2224711	2234931	4494223		uncultured_Mediterranean_phage(83.33%)	8	NA	NA
WP_085778164.1|2224711_2227633_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	62.1	0.0e+00
WP_085778165.1|2227915_2228422_+	single-stranded DNA-binding protein	NA	R9TP78	Rhizobium_phage	56.5	3.2e-45
WP_085778166.1|2228547_2229195_-	MarC family protein	NA	NA	NA	NA	NA
WP_085778167.1|2229432_2232240_+	DNA gyrase subunit A	NA	A0A1B1IVS2	uncultured_Mediterranean_phage	41.6	2.5e-75
WP_085778168.1|2232891_2233191_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085778169.1|2233281_2233776_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	37.2	2.3e-24
WP_020921292.1|2233819_2234392_+	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	54.7	5.7e-43
WP_085778170.1|2234421_2234931_+	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	58.8	1.6e-44
>prophage 4
NZ_CP021030	Rhizobium sp. NXC14 chromosome, complete genome	4494223	4042278	4052299	4494223		Mycobacterium_phage(25.0%)	9	NA	NA
WP_085779580.1|4042278_4042989_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2P1JXV3	Rhodococcus_phage	49.1	6.0e-50
WP_085779581.1|4042988_4043345_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_085779582.1|4043341_4044070_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	38.2	6.2e-42
WP_085780202.1|4044075_4045299_-	adenylate/guanylate cyclase domain-containing protein	NA	M1HLN3	Pelagibacter_phage	29.9	8.3e-15
WP_085780203.1|4045399_4046374_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	R4TBI6	Mycobacterium_phage	75.1	9.5e-139
WP_085779583.1|4046582_4048751_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	V9VI16	Lactococcus_phage	52.8	3.8e-212
WP_085779584.1|4048729_4049131_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A249Y1D6	Staphylococcus_phage	35.3	1.3e-09
WP_085779585.1|4049144_4049366_-	glutaredoxin-like protein NrdH	NA	V5UN81	Mycobacterium_phage	53.4	7.9e-17
WP_085780204.1|4050061_4052299_-	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	40.4	7.6e-123
>prophage 1
NZ_CP021031	Rhizobium sp. NXC14 plasmid pRspNXC14a, complete sequence	530065	288406	336721	530065	transposase	Stx2-converting_phage(40.0%)	34	NA	NA
WP_085780431.1|288406_288640_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_157131477.1|288621_289014_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157131478.1|289290_289719_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157131479.1|290163_290391_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086083886.1|290554_291772_+	cytochrome P450	NA	NA	NA	NA	NA
WP_085780434.1|291807_292050_+	ferredoxin	NA	NA	NA	NA	NA
WP_085780596.1|292256_292808_+	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_085780597.1|292864_294442_+	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	28.7	1.8e-09
WP_085780435.1|294719_295817_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_085780436.1|295871_296627_-|transposase	IS5 family transposase	transposase	A0A0N9SJT9	Paenibacillus_phage	38.0	1.3e-10
WP_085780598.1|299299_299659_+	Nif11 family protein	NA	NA	NA	NA	NA
WP_085780599.1|299752_301231_+	radical SAM family RiPP maturation amino acid epimerase	NA	NA	NA	NA	NA
WP_085780600.1|303069_303963_+	nitrogenase iron protein	NA	NA	NA	NA	NA
WP_085780438.1|304074_305577_+	nitrogenase molybdenum-iron protein alpha chain	NA	NA	NA	NA	NA
WP_085780439.1|305699_307241_+	nitrogenase molybdenum-iron protein subunit beta	NA	NA	NA	NA	NA
WP_085780440.1|307300_308785_+	nitrogenase iron-molybdenum cofactor biosynthesis protein NifE	NA	NA	NA	NA	NA
WP_085780441.1|308794_310153_+	nitrogenase iron-molybdenum cofactor biosynthesis protein NifN	NA	NA	NA	NA	NA
WP_085780442.1|310149_310644_+	nitrogen fixation protein NifX	NA	NA	NA	NA	NA
WP_085780443.1|310647_311133_+	NifX-associated nitrogen fixation protein	NA	NA	NA	NA	NA
WP_157131480.1|311399_312392_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
WP_085780444.1|313533_315171_-	MFS transporter	NA	NA	NA	NA	NA
WP_085780445.1|316687_317413_+	response regulator	NA	NA	NA	NA	NA
WP_085780446.1|317803_318628_+	LuxR family transcriptional regulator	NA	A0A1I9KF49	Aeromonas_phage	28.3	7.1e-18
WP_157131481.1|319287_320856_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157131482.1|320842_321910_+	lysine 2,3-aminomutase	NA	NA	NA	NA	NA
WP_085780449.1|322471_323359_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_085780601.1|323699_324560_+	cupin-like domain-containing protein	NA	NA	NA	NA	NA
WP_085780450.1|325056_326304_+	ATP-grasp domain-containing protein	NA	NA	NA	NA	NA
WP_085780452.1|329358_330585_-	ATP-grasp domain-containing protein	NA	NA	NA	NA	NA
WP_157131483.1|331135_331606_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_010003750.1|331505_331850_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_085780453.1|331923_333516_+|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	35.7	7.1e-75
WP_085780454.1|334419_335466_+	peptidase C45	NA	NA	NA	NA	NA
WP_157131484.1|336289_336721_+|transposase	transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	39.5	3.8e-07
>prophage 1
NZ_CP021033	Rhizobium sp. NXC14 plasmid pRspNXC14c, complete sequence	889015	514623	525537	889015		uncultured_virus(33.33%)	11	NA	NA
WP_085781727.1|514623_516021_-	sensor histidine kinase	NA	W8CYF6	Bacillus_phage	28.5	4.1e-18
WP_085781728.1|516010_516679_-	response regulator	NA	Q56AR1	Bacillus_thuringiensis_phage	30.4	2.9e-06
WP_085781729.1|516885_517452_+	isochorismatase family protein	NA	NA	NA	NA	NA
WP_085781730.1|517448_518459_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_085781731.1|518948_521288_-	PAS domain S-box protein	NA	Q8QNA2	Ectocarpus_siliculosus_virus	38.7	1.3e-11
WP_085781732.1|521507_521927_-	HD domain-containing protein	NA	G3KAZ0	Pseudomonas_phage	32.6	2.8e-07
WP_085781733.1|521932_522259_-	DUF2934 domain-containing protein	NA	NA	NA	NA	NA
WP_085781734.1|522340_522697_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085781735.1|522804_523095_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085781736.1|523443_523758_+	co-chaperone GroES	NA	A0A221S4G8	uncultured_virus	58.5	1.6e-23
WP_085781737.1|523908_525537_+	chaperonin GroEL	NA	A0A240F779	uncultured_virus	60.5	4.1e-179
