The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP018005	Coxiella burnetii strain RSA439 chromosome, complete genome	1969245	255670	264702	1969245		uncultured_Mediterranean_phage(28.57%)	12	NA	NA
WP_005771456.1|255670_256990_+	polynucleotide adenylyltransferase PcnB	NA	G3MAR3	Bacillus_virus	35.0	4.3e-25
WP_005771454.1|256986_257547_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	S4VNV0	Pandoravirus	39.2	4.5e-16
WP_005771452.1|257543_258023_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	42.6	3.1e-26
WP_005771450.1|258037_258283_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	51.1	3.3e-16
WP_005771448.1|258296_258509_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_005771445.1|258519_258759_-	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_010957482.1|259536_259893_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010957483.1|259906_260392_+	dUTP diphosphatase	NA	Q2NP83	Xanthomonas_phage	58.0	2.5e-47
WP_005771434.1|260369_261785_+	phosphomannomutase/phosphoglucomutase	NA	A0A127AWJ1	Bacillus_phage	29.9	1.5e-52
WP_010957484.1|261781_263251_-	sel1 repeat family protein	NA	NA	NA	NA	NA
WP_010957485.1|263247_263895_-	orotate phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_010957486.1|263922_264702_+	exodeoxyribonuclease III	NA	E3T4M6	Cafeteria_roenbergensis_virus	32.9	1.3e-32
>prophage 2
NZ_CP018005	Coxiella burnetii strain RSA439 chromosome, complete genome	1969245	605785	660282	1969245	protease,transposase	Tupanvirus(13.33%)	56	NA	NA
WP_010957722.1|605785_606931_+|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
WP_010957723.1|607022_608009_+	CBU_0665 family Dot/Icm T4SS effector	NA	NA	NA	NA	NA
WP_005771873.1|608022_609147_-	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
WP_010957724.1|609152_609968_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
WP_005771871.1|609964_610144_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010957725.1|610143_610317_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010957726.1|610567_611830_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.1	2.0e-51
WP_005771868.1|612253_613687_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	31.9	1.1e-63
WP_010957727.1|613672_615289_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010957728.1|615281_615827_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_010957729.1|615820_616411_-	SIS domain-containing protein	NA	NA	NA	NA	NA
WP_010957730.1|616414_617158_-	transaldolase	NA	A0A0E3FJJ0	Synechococcus_phage	31.7	3.6e-13
WP_005771860.1|617337_618351_+	SDR family oxidoreductase	NA	A0A0F7LC08	uncultured_marine_virus	32.8	5.2e-31
WP_010957731.1|618347_619385_+	NAD-dependent epimerase/dehydratase family protein	NA	Q58M85	Prochlorococcus_phage	40.0	3.7e-56
WP_010957746.1|621187_622747_+	sulfotransferase	NA	NA	NA	NA	NA
WP_010957747.1|622782_624540_-	bifunctional sulfate adenylyltransferase/adenylylsulfate kinase	NA	A0A2K9L4R9	Tupanvirus	40.5	1.2e-118
WP_010957748.1|624521_625355_-	3'(2'),5'-bisphosphate nucleotidase CysQ	NA	NA	NA	NA	NA
WP_010957749.1|625491_626241_+	SDR family oxidoreductase	NA	A0A0N9R355	Chrysochromulina_ericina_virus	27.5	5.3e-12
WP_010957750.1|626250_627114_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_005771814.1|627123_627900_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.8	5.6e-09
WP_010957751.1|628611_628941_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010957752.1|628957_629668_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010957753.1|629781_630072_-	AI-2E family transporter	NA	NA	NA	NA	NA
WP_040948109.1|630118_630520_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_005771808.1|631801_631945_-	hypothetical protein	NA	NA	NA	NA	NA
WP_032075117.1|632004_632460_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010957754.1|632936_633572_-	response regulator	NA	NA	NA	NA	NA
WP_010957755.1|633630_634881_-	MFS transporter	NA	NA	NA	NA	NA
WP_010957756.1|634930_635341_-	DUF3775 domain-containing protein	NA	NA	NA	NA	NA
WP_010957757.1|635513_636506_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	34.7	3.7e-37
WP_010957758.1|636564_637485_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_080692293.1|637632_637953_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080512964.1|637888_638569_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052341912.1|638546_639302_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010957759.1|639536_639821_+	membrane protein	NA	NA	NA	NA	NA
WP_010957760.1|639817_640243_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005771798.1|640298_641180_-	agmatinase	NA	NA	NA	NA	NA
WP_010957761.1|641179_642241_-	deoxyhypusine synthase	NA	NA	NA	NA	NA
WP_010957762.1|642264_643467_-	type III PLP-dependent enzyme	NA	A0A2K9L4I2	Tupanvirus	28.4	1.2e-26
WP_010957757.1|643712_644705_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	34.7	3.7e-37
WP_124224292.1|644817_645015_-	serine hydrolase	NA	NA	NA	NA	NA
WP_080713024.1|644906_645758_-	serine hydrolase	NA	NA	NA	NA	NA
WP_017252738.1|645729_645960_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005772900.1|646212_647346_+	MlaE family lipid ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_010957764.1|647342_648152_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	35.7	3.1e-26
WP_005771786.1|648135_649062_+	MCE family protein	NA	NA	NA	NA	NA
WP_005771783.1|649064_649664_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010957765.1|649660_650131_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010957766.1|651218_651443_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005772902.1|651424_652273_+	nucleoside phosphorylase	NA	NA	NA	NA	NA
WP_010957767.1|652293_652947_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010957768.1|653235_654564_+	trigger factor	NA	NA	NA	NA	NA
WP_010957769.1|654573_655161_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	52.3	1.1e-49
WP_005771771.1|655215_656484_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	54.9	2.1e-133
WP_010957770.1|656497_658951_+	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	49.9	2.1e-211
WP_010957771.1|658959_660282_+|protease	metalloprotease PmbA	protease	NA	NA	NA	NA
