The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP020833	Listeria monocytogenes strain CFSAN004330 chromosome, complete genome	2976340	118026	124551	2976340	tail	Listeria_phage(33.33%)	10	NA	NA
WP_003721739.1|118026_118479_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A059T7S0	Listeria_phage	47.9	4.0e-31
WP_003721740.1|118484_118820_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JAR9	uncultured_Caudovirales_phage	52.5	4.0e-20
WP_003732219.1|119036_119465_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003735200.1|119476_119893_+	hypothetical protein	NA	A8ASQ1	Listeria_phage	38.6	1.7e-20
WP_003732221.1|120170_120560_+	DUF5072 domain-containing protein	NA	NA	NA	NA	NA
WP_003721744.1|120572_121085_+|tail	phage major tail protein, TP901-1 family	tail	A0A097PBF4	Streptococcus_pyogenes_phage	62.7	1.2e-47
WP_003740132.1|121132_121435_+	hypothetical protein	NA	NA	NA	NA	NA
WP_072217178.1|121476_121881_+	phenylalanine racemase	NA	NA	NA	NA	NA
WP_085399942.1|121867_123736_+	hypothetical protein	NA	A0A097PAU2	Streptococcus_pyogenes_phage	45.8	3.5e-20
WP_061394756.1|123732_124551_+|tail	phage tail family protein	tail	A0A060AFE1	Staphylococcus_phage	35.0	4.2e-39
>prophage 2
NZ_CP020833	Listeria monocytogenes strain CFSAN004330 chromosome, complete genome	2976340	1152018	1159441	2976340		Hokovirus(33.33%)	8	NA	NA
WP_003721506.1|1152018_1152402_+	glycerol-3-phosphate cytidylyltransferase	NA	A0A1V0SGE7	Hokovirus	40.7	1.4e-16
WP_015454559.1|1152423_1153407_+	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	34.6	4.1e-12
WP_014930875.1|1153421_1154435_+	glycosyltransferase	NA	A0A1V0SAH6	Catovirus	32.0	6.0e-11
WP_003721509.1|1154643_1156134_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	49.7	9.5e-114
WP_015454563.1|1156145_1156970_+	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.9	3.3e-68
WP_009931485.1|1156982_1157291_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_045131473.1|1157351_1157756_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_077955612.1|1157884_1159441_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	28.1	3.0e-17
>prophage 3
NZ_CP020833	Listeria monocytogenes strain CFSAN004330 chromosome, complete genome	2976340	1247502	1356968	2976340	integrase,protease,terminase,tail,capsid,holin,tRNA,portal	Listeria_phage(69.57%)	112	1250403:1250418	1291392:1291407
WP_003721619.1|1247502_1248555_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2K9L3A8	Tupanvirus	34.9	1.3e-29
WP_085400368.1|1248554_1250963_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
1250403:1250418	attL	AAACCAGTAGACTTCT	NA	NA	NA	NA
WP_003721621.1|1251123_1251825_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.8	3.0e-33
WP_085400370.1|1251838_1255249_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_003721623.1|1255346_1255799_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_085400373.1|1255814_1259015_+	MMPL family transporter	NA	NA	NA	NA	NA
WP_085400376.1|1259118_1259793_+	uracil-DNA glycosylase	NA	A0A172DS90	Canid_alphaherpesvirus	47.3	9.8e-50
WP_085400380.1|1259830_1260757_-	ribonuclease HIII	NA	NA	NA	NA	NA
WP_003740576.1|1260910_1261174_+	cell division protein ZapA	NA	NA	NA	NA	NA
WP_003723849.1|1261173_1261716_+	CvpA family protein	NA	NA	NA	NA	NA
WP_085400385.1|1261808_1263521_+	DNA polymerase/3'-5' exonuclease PolX	NA	A0A2H4UV14	Bodo_saltans_virus	24.8	6.6e-18
WP_085400389.1|1263543_1265901_+	endonuclease MutS2	NA	Q94M10	Lactobacillus_phage	50.4	1.0e-21
WP_003723853.1|1265982_1266294_+	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	39.6	5.4e-19
WP_085400391.1|1266369_1268181_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_003729709.1|1268373_1269588_+	aspartate kinase	NA	NA	NA	NA	NA
WP_003733801.1|1269643_1270138_-	YslB family protein	NA	NA	NA	NA	NA
WP_003723856.1|1270285_1271086_+	glutamate racemase	NA	NA	NA	NA	NA
WP_003732780.1|1271098_1271845_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_014600781.1|1271848_1272460_+	XTP/dITP diphosphatase	NA	NA	NA	NA	NA
WP_012951515.1|1272496_1273021_+	metallophosphoesterase	NA	NA	NA	NA	NA
WP_031660124.1|1273306_1274461_-|integrase	site-specific integrase	integrase	A0A059T688	Listeria_phage	94.8	1.1e-207
WP_085400393.1|1274748_1275165_-	hypothetical protein	NA	NA	NA	NA	NA
WP_052750973.1|1275216_1275669_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A059T7S0	Listeria_phage	84.0	2.3e-71
WP_003730992.1|1275685_1276009_-	helix-turn-helix transcriptional regulator	NA	A0A059T6G1	Listeria_phage	71.0	7.2e-35
WP_025370566.1|1276812_1277136_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003730994.1|1277283_1277487_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003730995.1|1277553_1277745_+	helix-turn-helix transcriptional regulator	NA	A0A059T5F8	Listeria_phage	87.1	5.4e-22
WP_003730996.1|1277766_1278009_+	hypothetical protein	NA	A8ATD2	Listeria_phage	93.8	3.9e-41
WP_023553860.1|1278011_1278197_+	hypothetical protein	NA	A8ATD3	Listeria_phage	93.4	5.4e-27
WP_031644438.1|1278771_1279302_+	hypothetical protein	NA	A0A059T5F9	Listeria_phage	98.3	8.9e-99
WP_031644439.1|1279310_1279766_+	class I SAM-dependent methyltransferase	NA	A8ATY8	Listeria_phage	92.7	1.7e-82
WP_014601511.1|1279770_1280331_+	DUF1642 domain-containing protein	NA	A8ATY9	Listeria_phage	100.0	9.4e-107
WP_009912778.1|1280551_1281067_+	hypothetical protein	NA	C9E2P0	Enterococcus_phage	45.5	1.8e-32
WP_068997557.1|1281245_1281716_+	DUF1642 domain-containing protein	NA	R4IBV9	Listeria_phage	69.2	2.5e-28
WP_031669126.1|1281716_1282139_+	hypothetical protein	NA	Q8W5W4	Listeria_phage	95.0	1.5e-69
WP_012951535.1|1282305_1282689_+	hypothetical protein	NA	A8ATE8	Listeria_phage	92.9	5.3e-61
WP_003731665.1|1282690_1283170_+	siphovirus Gp157 family protein	NA	R4IBM0	Listeria_phage	76.7	7.6e-57
WP_012951536.1|1283189_1283879_+	AAA family ATPase	NA	R4IDY8	Listeria_phage	96.9	3.1e-128
WP_077310975.1|1283957_1285199_+	DEAD/DEAH box helicase	NA	A8ATF1	Listeria_phage	92.4	1.2e-207
WP_069007862.1|1285223_1285709_+	DUF669 domain-containing protein	NA	A0A059T5G4	Listeria_phage	97.5	1.6e-86
WP_069011928.1|1285731_1288005_+	DNA primase	NA	R4IBW2	Listeria_phage	94.8	0.0e+00
WP_031669964.1|1288339_1288654_+	VRR-NUC domain-containing protein	NA	Q8W5V6	Listeria_phage	98.1	1.7e-52
WP_031659886.1|1288766_1289300_+	DUF3310 domain-containing protein	NA	A8ATF5	Listeria_phage	78.9	2.2e-76
WP_003731655.1|1289517_1289745_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009917712.1|1289757_1290183_+	DUF722 domain-containing protein	NA	A0A059T6H4	Listeria_phage	100.0	8.0e-74
WP_031669127.1|1290280_1291024_+	DUF559 domain-containing protein	NA	NA	NA	NA	NA
WP_026749920.1|1291483_1291810_+	hypothetical protein	NA	A0A059T5G5	Listeria_phage	98.1	8.3e-55
1291392:1291407	attR	AGAAGTCTACTGGTTT	NA	NA	NA	NA
WP_009928009.1|1291809_1292124_+	HNH endonuclease	NA	A8ATF8	Listeria_phage	99.0	3.8e-57
WP_061107421.1|1292172_1292529_+	hypothetical protein	NA	A8AT94	Listeria_phage	99.0	2.0e-46
WP_085400396.1|1292525_1294169_+|terminase	terminase large subunit	terminase	A8AT95	Listeria_phage	98.4	0.0e+00
WP_009928006.1|1294178_1294568_-	DUF2513 domain-containing protein	NA	A0A1Q1PVT8	Staphylococcus_phage	39.8	4.8e-17
WP_009928005.1|1294618_1295749_+|portal	phage portal protein	portal	A0A059T6F0	Listeria_phage	95.5	4.6e-209
WP_009928004.1|1295745_1296462_+|protease	Clp protease ClpP	protease	A0A1S5SFF8	Streptococcus_phage	57.4	5.5e-67
WP_061107418.1|1296488_1297640_+|capsid	phage major capsid protein	capsid	A8AT98	Listeria_phage	93.0	2.7e-201
WP_003731645.1|1297826_1298126_+	hypothetical protein	NA	A8ATA0	Listeria_phage	100.0	5.3e-48
WP_045552979.1|1298109_1298475_+	hypothetical protein	NA	A8ATA1	Listeria_phage	94.2	2.3e-61
WP_045552980.1|1298471_1298873_+	hypothetical protein	NA	A8ATA2	Listeria_phage	97.0	2.0e-66
WP_061107417.1|1298869_1299253_+	hypothetical protein	NA	A8ATA3	Listeria_phage	95.3	4.4e-63
WP_012581455.1|1299274_1299862_+|tail	phage tail protein	tail	A8ATA4	Listeria_phage	100.0	4.0e-108
WP_009917698.1|1299933_1300266_+	hypothetical protein	NA	A8ATA5	Listeria_phage	99.1	1.8e-52
WP_085400397.1|1300481_1305404_+|tail	phage tail tape measure protein	tail	A0A059T5F4	Listeria_phage	94.6	0.0e+00
WP_039389944.1|1305400_1307050_+|tail	phage tail protein	tail	A0A059T682	Listeria_phage	99.5	0.0e+00
WP_039389947.1|1307065_1309360_+	hypothetical protein	NA	A0A059T7Y6	Listeria_phage	95.0	0.0e+00
WP_085400399.1|1309349_1310444_+	carbohydrate-binding protein CenC	NA	A0A059T7R4	Listeria_phage	98.9	2.8e-203
WP_003722523.1|1310482_1310848_+	hypothetical protein	NA	Q9T1A0	Listeria_phage	100.0	7.4e-12
WP_003722522.1|1310860_1311142_+|holin	holin	holin	A8ASL4	Listeria_phage	94.6	3.4e-41
WP_085400401.1|1311141_1311993_+	peptidase M15	NA	A0A059T7Y8	Listeria_phage	91.5	1.7e-136
WP_031646272.1|1312147_1312720_-	hypothetical protein	NA	A0A059T7R6	Listeria_phage	97.9	2.3e-100
WP_031646274.1|1312787_1313237_-	anti-CRISPR protein AcrIIA1	NA	Q9T196	Listeria_phage	91.9	5.7e-70
WP_031646276.1|1313242_1313614_-	anti-CRISPR protein AcrIIA2	NA	A0A059T5F6	Listeria_phage	93.5	3.1e-58
WP_031646277.1|1313647_1314025_-	anti-CRISPR protein AcrIIA3	NA	A0A059T686	Listeria_phage	92.0	4.3e-63
WP_031646274.1|1314093_1314543_-	anti-CRISPR protein AcrIIA1	NA	Q9T196	Listeria_phage	91.9	5.7e-70
WP_031646276.1|1314548_1314920_-	anti-CRISPR protein AcrIIA2	NA	A0A059T5F6	Listeria_phage	93.5	3.1e-58
WP_031646277.1|1314953_1315331_-	anti-CRISPR protein AcrIIA3	NA	A0A059T686	Listeria_phage	92.0	4.3e-63
WP_031646278.1|1315660_1315870_-	hypothetical protein	NA	R4IBK5	Listeria_phage	92.8	7.5e-25
WP_012951563.1|1316306_1316540_+	hypothetical protein	NA	A8ATC5	Listeria_phage	98.7	1.6e-36
WP_003723560.1|1317030_1318278_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	51.8	1.2e-106
WP_003723561.1|1318261_1319092_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	42.4	4.3e-47
WP_003732792.1|1319227_1320367_-|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_003732793.1|1320447_1320843_-	helix-turn-helix transcriptional regulator	NA	A9D9J6	Lactobacillus_prophage	57.4	1.7e-14
WP_003727524.1|1320993_1321209_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003732794.1|1321327_1321861_+|protease	matrixin family metalloprotease	protease	NA	NA	NA	NA
WP_003732795.1|1321878_1322544_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003732796.1|1322805_1323744_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003723884.1|1323858_1325142_+	trigger factor	NA	NA	NA	NA	NA
WP_003723886.1|1325326_1326586_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	63.2	1.4e-145
WP_003723887.1|1326704_1327271_+	type I signal peptidase SipX	NA	NA	NA	NA	NA
WP_003723888.1|1327305_1327875_+	type I signal peptidase SipY	NA	NA	NA	NA	NA
WP_003723889.1|1327976_1328519_+	type I signal peptidase SipZ	NA	NA	NA	NA	NA
WP_003723890.1|1328528_1329392_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA	NA
WP_003732797.1|1329388_1330174_+	ribonuclease HII	NA	G4YAY0	Emiliania_huxleyi_virus	39.2	8.8e-26
WP_003732798.1|1330307_1331168_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_009924617.1|1331439_1333518_+	type I DNA topoisomerase	NA	A0A1V0SB35	Catovirus	37.7	1.4e-107
WP_009924616.1|1333580_1334885_+|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
WP_009911635.1|1335167_1336070_+	tyrosine recombinase XerC	NA	A0A097EYL9	Mycobacterium_phage	28.6	1.2e-13
WP_003724001.1|1336090_1336630_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_010989722.1|1336643_1338053_+|protease	ATP-dependent protease ATPase subunit HslU	protease	W6AS21	Erwinia_phage	27.7	4.9e-43
WP_003726695.1|1338073_1338853_+	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA	NA
WP_085400404.1|1338955_1339375_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003724130.1|1339396_1339708_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009932949.1|1339710_1340583_+	aldose 1-epimerase family protein	NA	NA	NA	NA	NA
WP_003724132.1|1340624_1341221_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_003732802.1|1341378_1341786_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_003723731.1|1341966_1343934_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	42.5	6.7e-123
WP_031659513.1|1343930_1346390_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	31.6	3.6e-102
WP_003723733.1|1346472_1346940_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
WP_068998451.1|1347269_1349075_+	lmo1289 family class 1 internalin	NA	NA	NA	NA	NA
WP_085400406.1|1349406_1351203_+	class 1 internalin InlK	NA	NA	NA	NA	NA
WP_003723736.1|1351236_1353105_-	acetyltransferase	NA	B5WZU0	Pseudomonas_phage	31.9	6.5e-43
WP_003723737.1|1353317_1354016_+	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	32.4	1.3e-12
WP_003723738.1|1354248_1355925_+	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_012951578.1|1356050_1356968_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
>prophage 4
NZ_CP020833	Listeria monocytogenes strain CFSAN004330 chromosome, complete genome	2976340	1871538	1879824	2976340		Synechococcus_phage(33.33%)	8	NA	NA
WP_003722243.1|1871538_1872105_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.9	7.0e-25
WP_003722244.1|1872101_1873151_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.2	1.0e-61
WP_003722245.1|1873169_1874597_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.6	1.1e-53
WP_085400530.1|1874581_1876801_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	41.2	1.0e-159
WP_003733240.1|1876793_1877477_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_003722248.1|1877480_1877726_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_085400533.1|1877737_1878451_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3F9V5	Synechococcus_phage	37.8	1.4e-41
WP_003729814.1|1878531_1879824_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	33.0	2.5e-17
>prophage 5
NZ_CP020833	Listeria monocytogenes strain CFSAN004330 chromosome, complete genome	2976340	2536595	2544439	2976340		Streptococcus_phage(50.0%)	7	NA	NA
WP_003722604.1|2536595_2537567_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.4	5.2e-52
WP_003722605.1|2537574_2538543_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	43.3	6.7e-68
WP_003722606.1|2538544_2539420_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.7	1.9e-08
WP_085400772.1|2539527_2541258_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	54.2	4.6e-176
WP_026750232.1|2541299_2542361_-	galactose mutarotase	NA	NA	NA	NA	NA
WP_003722609.1|2542377_2543361_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	36.9	2.2e-50
WP_003732496.1|2543479_2544439_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	53.4	2.9e-87
>prophage 6
NZ_CP020833	Listeria monocytogenes strain CFSAN004330 chromosome, complete genome	2976340	2630899	2700539	2976340	integrase,protease,terminase,tail,capsid,holin,tRNA	Listeria_phage(87.04%)	85	2662729:2662778	2700627:2700676
WP_085400789.1|2630899_2632570_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_003723610.1|2632566_2633016_-	DUF1934 domain-containing protein	NA	NA	NA	NA	NA
WP_003723611.1|2633093_2633747_-|protease	site-2 protease family protein	protease	NA	NA	NA	NA
WP_003723612.1|2633820_2634006_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
WP_009924630.1|2634040_2635363_-	HD domain-containing protein	NA	A0A1B1ISR1	uncultured_Mediterranean_phage	33.2	2.6e-30
WP_003723614.1|2635377_2636214_-	lipoyl-[GcvH]:protein N-lipoyltransferase	NA	NA	NA	NA	NA
WP_003729274.1|2636531_2636732_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003723616.1|2636753_2637077_-	YxeA family protein	NA	NA	NA	NA	NA
WP_085400791.1|2637231_2638893_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003726112.1|2639028_2639643_-	SdpI family protein	NA	NA	NA	NA	NA
WP_003733267.1|2639666_2640299_-	nicotinamidase	NA	NA	NA	NA	NA
WP_003723621.1|2640299_2640824_-	dihydrofolate reductase	NA	NA	NA	NA	NA
WP_085400793.1|2640826_2641825_-	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA	NA
WP_003723623.1|2641921_2642194_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003723624.1|2642242_2643154_-	cation transporter	NA	NA	NA	NA	NA
WP_085400795.1|2643279_2647872_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_085400797.1|2648092_2648920_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_085400799.1|2649034_2649910_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_003723278.1|2649920_2650214_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_085400802.1|2650240_2650408_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003723280.1|2650476_2651145_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.0	5.0e-38
WP_010990019.1|2651144_2652233_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_009924763.1|2652311_2653691_-	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	47.1	1.3e-56
WP_009924764.1|2653687_2654365_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	48.0	2.6e-58
WP_085400804.1|2654411_2655197_-	formate dehydrogenase accessory sulfurtransferase FdhD	NA	NA	NA	NA	NA
WP_003723285.1|2655258_2655735_-	DUF1641 domain-containing protein	NA	NA	NA	NA	NA
WP_085400806.1|2655734_2658722_-	formate dehydrogenase subunit alpha	NA	NA	NA	NA	NA
WP_009931305.1|2659219_2660062_+	S-adenosyl-l-methionine hydroxide adenosyltransferase family protein	NA	NA	NA	NA	NA
WP_085400809.1|2660109_2661591_-	multidrug efflux MFS transporter	NA	NA	NA	NA	NA
WP_003723289.1|2661691_2662579_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
2662729:2662778	attL	TTAAGCCACTTGTCGGATTTGAACCGACGACCCCTTCCTTACCATGGAAG	NA	NA	NA	NA
WP_003723290.1|2663202_2663466_+	anti-CRISPR protein AcrIIA4	NA	A0A2D0TCG7	unidentified_phage	100.0	1.9e-41
WP_085400811.1|2663470_2663920_+	anti-CRISPR protein AcrIIA1	NA	Q9T196	Listeria_phage	96.6	4.9e-74
WP_025370597.1|2664162_2664864_-	DUF3800 domain-containing protein	NA	R4IBV1	Listeria_phage	97.8	6.4e-129
WP_085400813.1|2665011_2665857_-	peptidase M15	NA	A0A059T7Y8	Listeria_phage	92.2	2.3e-136
WP_085400815.1|2665856_2666123_-|holin	phage holin	holin	A0A059T684	Listeria_phage	94.3	8.9e-39
WP_009928179.1|2666143_2666560_-	hypothetical protein	NA	A0A059T5F5	Listeria_phage	99.3	9.3e-43
WP_009928178.1|2666538_2666982_-	hypothetical protein	NA	A0A059T6F6	Listeria_phage	100.0	6.8e-76
WP_085400818.1|2667029_2669195_-	hypothetical protein	NA	A8ATW1	Listeria_phage	94.7	0.0e+00
WP_003734108.1|2669207_2670776_-	hypothetical protein	NA	A8ATW0	Listeria_phage	99.6	3.1e-304
WP_085400820.1|2670772_2675572_-|tail	phage tail tape measure protein	tail	A8ATV9	Listeria_phage	97.1	0.0e+00
WP_077286899.1|2675576_2675888_-	hypothetical protein	NA	A0A0B5D116	Listeria_phage	97.8	3.4e-42
WP_003733698.1|2675884_2676316_-	hypothetical protein	NA	A8ATV7	Listeria_phage	97.9	4.0e-73
WP_003733697.1|2676371_2677061_-	Ig domain-containing protein	NA	A8ATV6	Listeria_phage	85.6	2.8e-100
WP_003725064.1|2677065_2677437_-	hypothetical protein	NA	A8ATV5	Listeria_phage	100.0	8.5e-64
WP_003733696.1|2677433_2677751_-	HK97 gp10 family phage protein	NA	A8ATV4	Listeria_phage	96.2	4.6e-50
WP_085400822.1|2677740_2678106_-	hypothetical protein	NA	A8ATV3	Listeria_phage	94.2	1.3e-61
WP_003723785.1|2678105_2678459_-	hypothetical protein	NA	A8ATV2	Listeria_phage	99.1	8.4e-61
WP_085400824.1|2678628_2679501_-	hypothetical protein	NA	A0A0B5CTX8	Listeria_phage	93.8	3.6e-153
WP_085400826.1|2679523_2680075_-	hypothetical protein	NA	A8ATU9	Listeria_phage	95.7	2.5e-83
WP_085400828.1|2680169_2681213_-|capsid	minor capsid protein	capsid	A0A0B5D111	Listeria_phage	97.4	1.1e-196
WP_085400830.1|2681217_2682777_-	hypothetical protein	NA	A8ATU7	Listeria_phage	96.3	5.9e-292
WP_070776471.1|2682791_2684111_-|terminase	PBSX family phage terminase large subunit	terminase	A0A0B5CYJ6	Listeria_phage	88.0	5.3e-233
WP_085400832.1|2684049_2684916_-|terminase	terminase	terminase	A8ATU5	Listeria_phage	67.6	1.1e-13
WP_061106472.1|2684950_2685184_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085400835.1|2685444_2686017_-	sigma-70 family RNA polymerase sigma factor	NA	A0A0B5D145	Listeria_phage	90.0	3.9e-92
WP_003734975.1|2686110_2686266_-	DUF3954 domain-containing protein	NA	A0A0B5D0E9	Listeria_phage	98.0	1.1e-22
WP_085400837.1|2686410_2686815_-	hypothetical protein	NA	A8AU00	Listeria_phage	99.3	9.3e-72
WP_121689798.1|2686780_2686921_-	BH0509 family protein	NA	A8ATZ9	Listeria_phage	97.8	7.7e-18
WP_085400839.1|2686917_2687223_-	response regulator	NA	A8ATZ8	Listeria_phage	97.0	1.1e-45
WP_085400842.1|2687254_2687737_-	single-stranded DNA-binding protein	NA	A8ASP5	Listeria_phage	78.1	6.5e-64
WP_085400845.1|2687733_2687982_-	DUF3850 domain-containing protein	NA	A0A059T7N3	Listeria_phage	88.0	9.8e-32
WP_085400847.1|2687974_2688310_-	hypothetical protein	NA	A8ATZ5	Listeria_phage	96.6	5.4e-09
WP_085400849.1|2688309_2688498_-	hypothetical protein	NA	NA	NA	NA	NA
WP_085400851.1|2688494_2689010_-	hypothetical protein	NA	C9E2P0	Enterococcus_phage	46.2	1.8e-32
WP_085400853.1|2689006_2689276_-	hypothetical protein	NA	A0A059T7S7	Listeria_phage	93.0	1.1e-39
WP_085400856.1|2689275_2689659_-	hypothetical protein	NA	A0A0B5CYR4	Listeria_phage	59.3	1.6e-36
WP_085400858.1|2689655_2689901_-	hypothetical protein	NA	A0A059T695	Listeria_phage	87.7	5.1e-33
WP_031641306.1|2689897_2690077_-	hypothetical protein	NA	A0A059T5G0	Listeria_phage	98.3	8.3e-25
WP_085400860.1|2690073_2690646_-	DUF1642 domain-containing protein	NA	Q8W5X2	Listeria_phage	52.4	1.0e-47
WP_085400862.1|2690642_2691455_-	DNA adenine methylase	NA	Q8W5X3	Listeria_phage	95.6	3.1e-151
WP_085400867.1|2691826_2692744_-	hypothetical protein	NA	A8ATY7	Listeria_phage	32.5	5.3e-22
WP_003725086.1|2692773_2693589_-	recombinase RecT	NA	A8ATY6	Listeria_phage	97.4	4.2e-148
WP_031646021.1|2693591_2694551_-	YqaJ viral recombinase family protein	NA	A8ATY5	Listeria_phage	98.4	1.9e-176
WP_039385072.1|2694783_2694972_-	hypothetical protein	NA	Q9T175	Listeria_phage	83.9	4.8e-23
WP_085400869.1|2695074_2695281_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_085400871.1|2695270_2695801_-	hypothetical protein	NA	A0A0B5D173	Listeria_phage	89.6	7.9e-79
WP_085400874.1|2695924_2696704_-	phage antirepressor Ant	NA	A0A0B5CTU1	Listeria_phage	95.7	1.1e-137
WP_069015680.1|2696716_2696992_-	hypothetical protein	NA	A8ASM5	Listeria_phage	85.1	4.9e-40
WP_069015679.1|2696988_2697225_-	hypothetical protein	NA	A0A059T5E9	Listeria_phage	96.2	8.1e-36
WP_026747215.1|2697245_2697449_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_039381694.1|2697624_2697930_+	helix-turn-helix transcriptional regulator	NA	A0A059T669	Listeria_phage	64.3	4.0e-27
WP_012951966.1|2697960_2698452_+	hypothetical protein	NA	A8ATX4	Listeria_phage	99.4	2.9e-91
WP_077951825.1|2698474_2698693_+	zinc-ribbon domain-containing protein	NA	A0A059T6E3	Listeria_phage	95.8	1.3e-32
WP_003724017.1|2698707_2699313_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003724018.1|2699375_2700539_+|integrase	site-specific integrase	integrase	S5MNZ2	Brevibacillus_phage	31.2	4.4e-50
2700627:2700676	attR	TTAAGCCACTTGTCGGATTTGAACCGACGACCCCTTCCTTACCATGGAAG	NA	NA	NA	NA
>prophage 1
NZ_CP020834	Listeria monocytogenes strain CFSAN004330 plasmid pCFSAN004330, complete sequence	81588	5237	24908	81588	transposase,integrase	Streptococcus_phage(55.56%)	21	5972:5990	12490:12508
WP_003726384.1|5237_5918_-|transposase	IS6 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	69.0	1.2e-92
5972:5990	attL	AAAACTTTGCAACAGAACC	NA	NA	NA	NA
WP_023558764.1|5977_6481_+|integrase	tyrosine-type recombinase/integrase	integrase	D2XR58	Bacillus_phage	35.9	6.6e-19
WP_003726381.1|7125_9243_-	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	62.6	5.3e-235
WP_003726380.1|9239_9599_-	winged helix-turn-helix transcriptional regulator	NA	E4ZFI8	Streptococcus_phage	48.2	5.4e-23
WP_003725299.1|9872_10472_-	recombinase family protein	NA	I1ZBD6	Salisaeta_icosahedral_phage	31.8	1.8e-15
WP_003725298.1|10630_12067_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	A0A2H4JGQ6	uncultured_Caudovirales_phage	24.8	9.4e-18
WP_003725297.1|12059_12563_+	AAA family ATPase	NA	NA	NA	NA	NA
12490:12508	attR	GGTTCTGTTGCAAAGTTTT	NA	NA	NA	NA
WP_002319817.1|12562_13243_+|transposase	IS6-like element ISS1N family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	84.1	2.5e-109
WP_102135615.1|13246_14629_+	TraM recognition domain-containing protein	NA	NA	NA	NA	NA
WP_023559429.1|14647_14872_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023559430.1|14861_16475_+	DUF1738 domain-containing protein	NA	NA	NA	NA	NA
WP_077310416.1|16544_16715_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_003725294.1|17325_17865_+	efflux transporter transcriptional regulator BcrA	NA	NA	NA	NA	NA
WP_003725293.1|17876_18194_+	quaternary ammonium compound efflux SMR transporter BcrB	NA	NA	NA	NA	NA
WP_003725292.1|18211_18556_+	quaternary ammonium compound efflux SMR transporter BcrC	NA	NA	NA	NA	NA
WP_003725288.1|19481_19838_+	glyoxalase	NA	NA	NA	NA	NA
WP_003725287.1|20233_21097_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_003725286.1|21336_21846_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003750115.1|21916_22105_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003725285.1|22105_23050_+	AAA domain-containing protein	NA	A7KV75	Bacillus_phage	36.8	9.2e-46
WP_002389568.1|24227_24908_+|transposase	IS6 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	90.7	2.6e-119
