The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP020831	Listeria monocytogenes strain PNUSAL000144 chromosome, complete genome	2912199	131695	138220	2912199	tail	Listeria_phage(33.33%)	10	NA	NA
WP_003721739.1|131695_132148_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A059T7S0	Listeria_phage	47.9	4.0e-31
WP_003721740.1|132153_132489_-	helix-turn-helix transcriptional regulator	NA	A0A2H4JAR9	uncultured_Caudovirales_phage	52.5	4.0e-20
WP_003732219.1|132705_133134_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003721742.1|133145_133562_+	hypothetical protein	NA	A8ASQ1	Listeria_phage	39.3	1.3e-20
WP_012952083.1|133839_134229_+	DUF5072 domain-containing protein	NA	NA	NA	NA	NA
WP_003721744.1|134241_134754_+|tail	phage major tail protein, TP901-1 family	tail	A0A097PBF4	Streptococcus_pyogenes_phage	62.7	1.2e-47
WP_003721745.1|134801_135104_+	hypothetical protein	NA	NA	NA	NA	NA
WP_072217178.1|135145_135550_+	phenylalanine racemase	NA	NA	NA	NA	NA
WP_085392060.1|135536_137405_+	hypothetical protein	NA	A0A097PAU2	Streptococcus_pyogenes_phage	45.8	3.5e-20
WP_003734720.1|137401_138220_+|tail	phage tail family protein	tail	A0A060AFE1	Staphylococcus_phage	35.0	7.2e-39
>prophage 2
NZ_CP020831	Listeria monocytogenes strain PNUSAL000144 chromosome, complete genome	2912199	1138611	1146033	2912199		Hokovirus(33.33%)	8	NA	NA
WP_003721506.1|1138611_1138995_+	glycerol-3-phosphate cytidylyltransferase	NA	A0A1V0SGE7	Hokovirus	40.7	1.4e-16
WP_003721507.1|1139016_1140000_+	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	35.3	3.1e-12
WP_010989660.1|1140014_1141028_+	glycosyltransferase	NA	A0A1V0SAH6	Catovirus	32.0	7.9e-11
WP_003721509.1|1141236_1142727_+	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	49.7	9.5e-114
WP_003727000.1|1142738_1143563_+	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.6	9.7e-68
WP_085392249.1|1143575_1143884_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_085392250.1|1143943_1144348_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_010989661.1|1144476_1146033_+	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	28.1	2.3e-17
>prophage 3
NZ_CP020831	Listeria monocytogenes strain PNUSAL000144 chromosome, complete genome	2912199	1280709	1340199	2912199	protease,tRNA	Bacillus_virus(16.67%)	58	NA	NA
WP_003723562.1|1280709_1281849_-|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_003723563.1|1281929_1282325_-	helix-turn-helix transcriptional regulator	NA	A9D9J6	Lactobacillus_prophage	57.4	1.3e-14
WP_003727524.1|1282475_1282691_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_003732794.1|1282809_1283343_+|protease	matrixin family metalloprotease	protease	NA	NA	NA	NA
WP_003732795.1|1283360_1284026_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039386733.1|1284287_1285226_+	hypothetical protein	NA	NA	NA	NA	NA
WP_039386731.1|1285340_1286624_+	trigger factor	NA	NA	NA	NA	NA
WP_003723886.1|1286808_1288068_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	63.2	1.4e-145
WP_039120516.1|1288186_1288753_+	type I signal peptidase SipX	NA	NA	NA	NA	NA
WP_009924619.1|1288787_1289357_+	type I signal peptidase SipY	NA	NA	NA	NA	NA
WP_003723889.1|1289458_1290001_+	type I signal peptidase SipZ	NA	NA	NA	NA	NA
WP_003723890.1|1290010_1290874_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA	NA
WP_003723891.1|1290870_1291656_+	ribonuclease HII	NA	G4YAY0	Emiliania_huxleyi_virus	39.2	3.0e-26
WP_003723892.1|1291789_1292650_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_003732799.1|1292921_1295000_+	type I DNA topoisomerase	NA	A0A1V0SB35	Catovirus	37.5	3.2e-107
WP_009924616.1|1295062_1296367_+|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	tRNA	NA	NA	NA	NA
WP_009911635.1|1296649_1297552_+	tyrosine recombinase XerC	NA	A0A097EYL9	Mycobacterium_phage	28.6	1.2e-13
WP_003724001.1|1297572_1298112_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
WP_012581410.1|1298125_1299535_+|protease	ATP-dependent protease ATPase subunit HslU	protease	W6AS21	Erwinia_phage	28.8	5.8e-44
WP_003726695.1|1299555_1300335_+	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA	NA
WP_003724129.1|1300437_1300857_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003724130.1|1300878_1301190_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009932949.1|1301192_1302065_+	aldose 1-epimerase family protein	NA	NA	NA	NA	NA
WP_003724132.1|1302106_1302703_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_003732802.1|1302860_1303268_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_003723731.1|1303448_1305416_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	42.5	6.7e-123
WP_010989723.1|1305412_1307872_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	31.6	4.7e-102
WP_003723733.1|1307953_1308421_+	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
WP_015454663.1|1308750_1310532_+	lmo1289 family class 1 internalin	NA	NA	NA	NA	NA
WP_039386725.1|1310863_1312660_+	class 1 internalin InlK	NA	NA	NA	NA	NA
WP_012951576.1|1312693_1314562_-	acetyltransferase	NA	B5WZU0	Pseudomonas_phage	31.9	6.5e-43
WP_009925395.1|1314774_1315473_+	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	32.4	9.9e-13
WP_003723738.1|1315705_1317382_+	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_012951578.1|1317507_1318425_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_003719566.1|1318547_1318781_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_072219379.1|1318891_1320115_+	GTPase HflX	NA	NA	NA	NA	NA
WP_010989728.1|1320107_1321334_+	methionine gamma-lyase family protein	NA	NA	NA	NA	NA
WP_003719570.1|1321537_1321906_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003723435.1|1321976_1323311_+	type I glutamate--ammonia ligase	NA	A0A1V0SJ53	Klosneuvirus	26.4	2.0e-06
WP_085392278.1|1323454_1324750_+	arsenic transporter	NA	A0A2H4PQU3	Staphylococcus_phage	61.4	6.9e-145
WP_061395186.1|1324793_1325315_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_003723438.1|1325344_1325959_-	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	62.1	9.3e-15
WP_003723439.1|1326116_1326446_+	cell division suppressor protein YneA	NA	NA	NA	NA	NA
WP_003723440.1|1326537_1326765_+	DUF896 domain-containing protein	NA	NA	NA	NA	NA
WP_003732809.1|1326911_1328906_+	transketolase	NA	NA	NA	NA	NA
WP_003723442.1|1329126_1329366_+	YneF family protein	NA	NA	NA	NA	NA
WP_039386722.1|1329416_1330259_-	DUF2785 domain-containing protein	NA	NA	NA	NA	NA
WP_003723444.1|1330277_1331009_-	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	59.1	1.2e-80
WP_003723445.1|1331030_1331537_-	ParB-like nuclease domain-containing protein	NA	A0A220GKT8	Streptococcus_phage	66.7	4.0e-56
WP_003723446.1|1331546_1332851_-	DUF3440 domain-containing protein	NA	A0A220GKF8	Streptococcus_phage	52.1	9.5e-134
WP_010989732.1|1332840_1334046_-	helicase SNF2	NA	L0P6E9	Lactobacillus_phage	47.1	4.9e-92
WP_003723448.1|1334023_1334398_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003723449.1|1334690_1335419_+	UMP kinase	NA	NA	NA	NA	NA
WP_003723450.1|1335418_1335976_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_003732812.1|1336205_1336964_+	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	42.1	4.4e-22
WP_003732813.1|1336977_1337766_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_003723453.1|1337780_1338923_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_003723454.1|1338936_1340199_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
>prophage 4
NZ_CP020831	Listeria monocytogenes strain PNUSAL000144 chromosome, complete genome	2912199	1833888	1842174	2912199		Synechococcus_phage(33.33%)	8	NA	NA
WP_003722243.1|1833888_1834455_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.9	7.0e-25
WP_085392342.1|1834451_1835501_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.5	1.7e-61
WP_003722245.1|1835519_1836947_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.6	1.1e-53
WP_014602076.1|1836931_1839151_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	41.2	1.3e-159
WP_003733240.1|1839143_1839827_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_015454911.1|1839830_1840076_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_010989809.1|1840087_1840801_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3F9V5	Synechococcus_phage	38.3	2.3e-41
WP_020246648.1|1840881_1842174_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	33.0	2.5e-17
>prophage 5
NZ_CP020831	Listeria monocytogenes strain PNUSAL000144 chromosome, complete genome	2912199	2508088	2515932	2912199		Streptococcus_phage(50.0%)	7	NA	NA
WP_003722604.1|2508088_2509060_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.4	5.2e-52
WP_003722605.1|2509067_2510036_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	43.3	6.7e-68
WP_010990001.1|2510037_2510913_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.7	3.2e-08
WP_031645160.1|2511020_2512751_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	53.3	3.3e-174
WP_085392435.1|2512792_2513854_-	galactose mutarotase	NA	NA	NA	NA	NA
WP_009924988.1|2513870_2514854_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	37.2	2.6e-51
WP_003722610.1|2514972_2515932_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	53.7	2.0e-88
>prophage 6
NZ_CP020831	Listeria monocytogenes strain PNUSAL000144 chromosome, complete genome	2912199	2804633	2814665	2912199		Tupanvirus(33.33%)	7	NA	NA
WP_009924395.1|2804633_2806787_-	DNA topoisomerase III	NA	A0A1X9I6W8	Streptococcus_phage	34.1	3.0e-44
WP_085392478.1|2806810_2808583_-	DNA helicase RecQ	NA	A0A2K9L3P7	Tupanvirus	37.1	8.2e-80
WP_003722118.1|2808743_2810210_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.0	8.0e-97
WP_085392479.1|2810495_2811026_-	ADP-ribose-binding protein	NA	A0A0K1L687	Scale_drop_disease_virus	50.0	2.2e-28
WP_046335726.1|2811083_2812694_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	29.7	1.3e-47
WP_077906800.1|2812874_2813183_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009924391.1|2813210_2814665_+	glycoside hydrolase family 1 protein	NA	A0A0B5JD41	Pandoravirus	30.3	1.9e-50
