assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002082825.1_ASM208282v1	NZ_CP020595	Acinetobacter baumannii strain USA15 chromosome, complete genome	1	2170775-2170877	1	CRISPRCasFinder	no		csa3,WYL,DEDDh,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Orphan	GACTAAAGCTTCGCTAGAAGACGAGA	26	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,DEDDh,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	NA,NA	NA|321aa|up_9|NZ_CP020595.1_2159047_2160010_+	cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC)	NA|340aa|up_8|NZ_CP020595.1_2160023_2161043_+	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	NA|512aa|up_7|NZ_CP020595.1_2161044_2162580_+	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed	NA|468aa|up_6|NZ_CP020595.1_2162590_2163994_+	PRK06416, PRK06416, dihydrolipoamide dehydrogenase; Reviewed	NA|262aa|up_5|NZ_CP020595.1_2164020_2164806_+	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs	NA|353aa|up_4|NZ_CP020595.1_2164835_2165894_+	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase	NA|304aa|up_3|NZ_CP020595.1_2165941_2166853_-	pfam01062, Bestrophin, Bestrophin, RFP-TM, chloride channel	NA|424aa|up_2|NZ_CP020595.1_2166922_2168194_-	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|232aa|up_1|NZ_CP020595.1_2168386_2169082_+	cd07724, POD-like_MBL-fold, ETHE1 (PDO type I), persulfide dioxygenase A (PDOA, PDO type II) and related proteins; MBL-fold metallo-hydrolase domain	NA|552aa|up_0|NZ_CP020595.1_2169091_2170747_+	cd14503, PTP-bact, bacterial tyrosine-protein phosphataseS similar to Neisseria NMA1982	NA|264aa|down_0|NZ_CP020595.1_2170940_2171732_+	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|335aa|down_1|NZ_CP020595.1_2171841_2172846_+	PRK06270, PRK06270, homoserine dehydrogenase; Provisional	NA|306aa|down_2|NZ_CP020595.1_2172878_2173796_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|285aa|down_3|NZ_CP020595.1_2173962_2174817_+	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]	NA|132aa|down_4|NZ_CP020595.1_2174813_2175209_-	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|203aa|down_5|NZ_CP020595.1_2175304_2175913_+	PRK00170, PRK00170, azoreductase; Reviewed	NA|450aa|down_6|NZ_CP020595.1_2175996_2177346_-	TIGR00937, Chromate_transport_protein, chromate transporter, chromate ion transporter (CHR) family	NA|248aa|down_7|NZ_CP020595.1_2177587_2178331_+	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|578aa|down_8|NZ_CP020595.1_2178359_2180093_+	PRK08275, PRK08275, putative oxidoreductase; Provisional	NA|82aa|down_9|NZ_CP020595.1_2180113_2180359_+	COG1146, COG1146, Ferredoxin [Energy production and conversion]
GCF_002082825.1_ASM208282v1	NZ_CP020595	Acinetobacter baumannii strain USA15 chromosome, complete genome	2	2465929-2466069	2	CRISPRCasFinder	no		csa3,WYL,DEDDh,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Orphan	CCAAAGCTTTAGCCGCTTTGTCTTGCTCAGGTGGCGTTTTTT	42	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,DEDDh,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	NA|109aa|up_2|NZ_CP020595.1_2464608_2464935_-,NA|120aa|up_1|NZ_CP020595.1_2465035_2465395_-,NA|78aa|up_0|NZ_CP020595.1_2465610_2465844_+,NA|108aa|down_4|NZ_CP020595.1_2469099_2469423_-,NA|82aa|down_9|NZ_CP020595.1_2473939_2474185_+	NA|529aa|up_9|NZ_CP020595.1_2458511_2460098_+	PRK15097, PRK15097, cytochrome bd-I ubiquinol oxidase subunit CydA	NA|382aa|up_8|NZ_CP020595.1_2460094_2461240_+	TIGR00203, ubiquinol_oxidase_subunit_2, cytochrome d oxidase, subunit II (cydB)	NA|34aa|up_7|NZ_CP020595.1_2461253_2461355_+	pfam08173, YbgT_YccB, Membrane bound YbgT-like protein	NA|100aa|up_6|NZ_CP020595.1_2461355_2461655_+	pfam09600, Cyd_oper_YbgE, Cyd operon protein YbgE (Cyd_oper_YbgE)	NA|224aa|up_5|NZ_CP020595.1_2461712_2462384_-	pfam09829, DUF2057, Uncharacterized protein conserved in bacteria (DUF2057)	NA|199aa|up_4|NZ_CP020595.1_2462609_2463206_-	COG3560, FMR2, Predicted oxidoreductase related to nitroreductase [General function prediction only]	NA|369aa|up_3|NZ_CP020595.1_2463394_2464501_-	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional	NA|109aa|up_2|NZ_CP020595.1_2464608_2464935_-	NA	NA|120aa|up_1|NZ_CP020595.1_2465035_2465395_-	NA	NA|78aa|up_0|NZ_CP020595.1_2465610_2465844_+	NA	NA|111aa|down_0|NZ_CP020595.1_2466320_2466653_+	pfam11042, DUF2750, Protein of unknown function (DUF2750)	NA|144aa|down_1|NZ_CP020595.1_2466793_2467225_+	cd04623, CBS_pair_bac_euk, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria and eukaryotes	NA|403aa|down_2|NZ_CP020595.1_2467275_2468484_-	PRK02627, PRK02627, acetylornithine aminotransferase; Provisional	NA|114aa|down_3|NZ_CP020595.1_2468711_2469053_+	TIGR00365, TIGR00365, monothiol glutaredoxin, Grx4 family	NA|108aa|down_4|NZ_CP020595.1_2469099_2469423_-	NA	NA|301aa|down_5|NZ_CP020595.1_2469665_2470568_+	cd08473, PBP2_CrgA_like_4, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|265aa|down_6|NZ_CP020595.1_2470620_2471415_-	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|434aa|down_7|NZ_CP020595.1_2471767_2473069_+	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ	NA|140aa|down_8|NZ_CP020595.1_2473260_2473680_+	COG3193, GlcG, Uncharacterized protein, possibly involved in utilization of glycolate and propanediol [General function prediction only]	NA|82aa|down_9|NZ_CP020595.1_2473939_2474185_+	NA
GCF_002082825.1_ASM208282v1	NZ_CP020595	Acinetobacter baumannii strain USA15 chromosome, complete genome	3	3144133-3147162	3,1,1,2,3	CRISPRCasFinder,CRT,PILER-CR,PILER-CR,PILER-CR	no	cas6f,cas7f,cas5f,cas8f,cas3f,cas1	csa3,WYL,DEDDh,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Type I-F	TTTCTAAATGGCGTATGCCGCCATGAAC,TTTCTAAATGGCGTATGCCGCCATGAAC,TTTCTAAATGGCGTATGCCGCCATGAAC,TTTCTAAATGGCGTATGCCGCCATGAAC,TTTCTAAATGGCGTATGCCGCCATGAAC	28,28,28,28,28	0	0	NA	NA	NA:NA:NA:NA:NA	50,49,43,43,43	50	TypeI-F	csa3,WYL,DEDDh,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	NA,NA|211aa|down_8|NZ_CP020595.1_3157604_3158237_-	NA|155aa|up_9|NZ_CP020595.1_3132806_3133271_+	pfam14539, DUF4442, Domain of unknown function (DUF4442)	NA|365aa|up_8|NZ_CP020595.1_3133304_3134399_-	cd03506, Delta6-FADS-like, The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like CD includes the integral-membrane enzymes: delta-4, delta-5, delta-6, delta-8, delta-8-sphingolipid, and delta-11 desaturases found in vertebrates, higher plants, fungi, and bacteria	NA|357aa|up_7|NZ_CP020595.1_3134411_3135482_-	cd06216, FNR_iron_sulfur_binding_2, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain	NA|232aa|up_6|NZ_CP020595.1_3135622_3136318_+	PRK11202, PRK11202, HTH-type transcriptional repressor FabR	NA|339aa|up_5|NZ_CP020595.1_3136484_3137501_+	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|946aa|up_4|NZ_CP020595.1_3137558_3140396_-	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|213aa|up_3|NZ_CP020595.1_3140540_3141179_-	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|235aa|up_2|NZ_CP020595.1_3141311_3142016_-	COG3433, COG3433, Aryl carrier domain [Secondary metabolites biosynthesis, transport, and catabolism]	NA|433aa|up_1|NZ_CP020595.1_3142077_3143376_-	PRK00062, PRK00062, glutamate-1-semialdehyde 2,1-aminomutase	NA|204aa|up_0|NZ_CP020595.1_3143418_3144030_-	cd00564, TMP_TenI, Thiamine monophosphate synthase (TMP synthase)/TenI	cas6f|204aa|down_0|NZ_CP020595.1_3147293_3147905_-	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	cas7f|338aa|down_1|NZ_CP020595.1_3147907_3148921_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|295aa|down_2|NZ_CP020595.1_3148947_3149832_-	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas8f|417aa|down_3|NZ_CP020595.1_3149831_3151082_-	pfam09611, Cas_Csy1, CRISPR-associated protein (Cas_Csy1)	cas3f|1125aa|down_4|NZ_CP020595.1_3151097_3154472_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|322aa|down_5|NZ_CP020595.1_3154468_3155434_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|128aa|down_6|NZ_CP020595.1_3155556_3155940_-	pfam06127, DUF962, Protein of unknown function (DUF962)	NA|488aa|down_7|NZ_CP020595.1_3156105_3157569_+	cd07756, CYTH-like_Pase_CHAD, Uncharacterized subgroup of the CYTH-like superfamily having an associated CHAD domain	NA|211aa|down_8|NZ_CP020595.1_3157604_3158237_-	NA	NA|128aa|down_9|NZ_CP020595.1_3158340_3158724_+	pfam11342, DUF3144, Protein of unknown function (DUF3144)
GCF_002082825.1_ASM208282v1	NZ_CP020595	Acinetobacter baumannii strain USA15 chromosome, complete genome	4	3511536-3511622	4	CRISPRCasFinder	no		csa3,WYL,DEDDh,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Orphan	GCCAAAATTAAAAGATTATCAATCTT	26	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,DEDDh,cas3,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	NA|47aa|up_8|NZ_CP020595.1_3500306_3500447_-,NA|68aa|up_7|NZ_CP020595.1_3500629_3500833_-,NA|143aa|down_5|NZ_CP020595.1_3517170_3517599_-	NA|492aa|up_9|NZ_CP020595.1_3498731_3500207_-	pfam01235, Na_Ala_symp, Sodium:alanine symporter family	NA|47aa|up_8|NZ_CP020595.1_3500306_3500447_-	NA	NA|68aa|up_7|NZ_CP020595.1_3500629_3500833_-	NA	NA|235aa|up_6|NZ_CP020595.1_3501343_3502048_+	cd02136, PnbA_NfnB-like, nitroreductase similar to Mycobacterium smegmatis NfnB	NA|405aa|up_5|NZ_CP020595.1_3502075_3503290_-	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|725aa|up_4|NZ_CP020595.1_3503417_3505592_+	TIGR01666, Uncharacterized_protein_HI_1680, TIGR01666 family membrane protein	NA|192aa|up_3|NZ_CP020595.1_3505692_3506268_+	pfam13630, SdpI, SdpI/YfhL protein family	NA|849aa|up_2|NZ_CP020595.1_3506425_3508972_+	cd06200, SiR_like1, Cytochrome p450- like alpha subunits of E	NA|262aa|up_1|NZ_CP020595.1_3509098_3509884_+	cd06259, YdcF-like, YdcF-like	NA|168aa|up_0|NZ_CP020595.1_3510960_3511464_-	cd16913, YkuD_like, L,D-transpeptidases/carboxypeptidases similar to Bacillus YkuD	NA|303aa|down_0|NZ_CP020595.1_3512087_3512996_+	pfam08907, DUF1853, Domain of unknown function (DUF1853)	NA|48aa|down_1|NZ_CP020595.1_3513094_3513238_+	COG5510, COG5510, Predicted small secreted protein [Function unknown]	NA|378aa|down_2|NZ_CP020595.1_3513363_3514497_+	PRK13009, PRK13009, succinyl-diaminopimelate desuccinylase; Reviewed	NA|294aa|down_3|NZ_CP020595.1_3514634_3515516_-	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold	NA|464aa|down_4|NZ_CP020595.1_3515523_3516915_-	COG0635, HemN, Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism]	NA|143aa|down_5|NZ_CP020595.1_3517170_3517599_-	NA	NA|1507aa|down_6|NZ_CP020595.1_3517631_3522152_-	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms]	NA|311aa|down_7|NZ_CP020595.1_3523580_3524513_+	pfam13737, DDE_Tnp_1_5, Transposase DDE domain	NA|179aa|down_8|NZ_CP020595.1_3525471_3526008_-	COG0835, CheW, Chemotaxis signal transduction protein [Cell motility and secretion / Signal transduction mechanisms]	NA|121aa|down_9|NZ_CP020595.1_3526068_3526431_-	cd17538, REC_D1_PleD-like, first (D1) phosphoacceptor receiver (REC) domain of response regulator PleD and similar domains
