assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002078415.1_ASM207841v1	NZ_CP015896	Lactococcus lactis subsp. lactis strain 229 chromosome, complete genome	1	1474689-1474867	1	CRISPRCasFinder	no		cas3,DEDDh,csa3,DinG	Orphan	GATAAAATGCTCATGTTAATCGCATTACTGACAGAAAGTTCAG	43	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,DinG,RT	NA|60aa|up_4|NZ_CP015896.1_1471501_1471681_-,NA|84aa|up_3|NZ_CP015896.1_1471715_1471967_-,NA|115aa|down_7|NZ_CP015896.1_1483128_1483473_-	NA|314aa|up_9|NZ_CP015896.1_1467876_1468818_+	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]	NA|136aa|up_8|NZ_CP015896.1_1468888_1469296_+	COG5341, COG5341, Uncharacterized protein conserved in bacteria [Function unknown]	NA|177aa|up_7|NZ_CP015896.1_1469292_1469823_+	COG4769, COG4769, Predicted membrane protein [Function unknown]	NA|320aa|up_6|NZ_CP015896.1_1469813_1470773_+	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism]	NA|239aa|up_5|NZ_CP015896.1_1470769_1471486_+	COG0357, GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division [Cell envelope biogenesis, outer membrane]	NA|60aa|up_4|NZ_CP015896.1_1471501_1471681_-	NA	NA|84aa|up_3|NZ_CP015896.1_1471715_1471967_-	NA	NA|238aa|up_2|NZ_CP015896.1_1471968_1472682_-	PRK00230, PRK00230, orotidine-5'-phosphate decarboxylase	NA|312aa|up_1|NZ_CP015896.1_1472831_1473767_-	PRK07259, PRK07259, dihydroorotate dehydrogenase	NA|263aa|up_0|NZ_CP015896.1_1473839_1474628_-	cd06218, DHOD_e_trans, FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase	NA|455aa|down_0|NZ_CP015896.1_1475162_1476527_-	cd17503, MFS_LmrB_MDR_like, Bacillus subtilis lincomycin resistance protein (LmrB) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|404aa|down_1|NZ_CP015896.1_1476903_1478115_+	COG4260, COG4260, Membrane protease subunit, stomatin/prohibitin family [Amino acid    transport and metabolism]	NA|380aa|down_2|NZ_CP015896.1_1478274_1479414_+	pfam07191, zinc-ribbons_6, zinc-ribbons	NA|262aa|down_3|NZ_CP015896.1_1479410_1480196_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|179aa|down_4|NZ_CP015896.1_1480225_1480762_-	cd02566, PseudoU_synth_RluE, Pseudouridine synthase, Escherichia coli RluE	NA|388aa|down_5|NZ_CP015896.1_1481100_1482264_-	pfam11797, DUF3324, Protein of unknown function C-terminal (DUF3324)	NA|271aa|down_6|NZ_CP015896.1_1482341_1483154_-	pfam13731, WxL, WxL domain surface cell wall-binding	NA|115aa|down_7|NZ_CP015896.1_1483128_1483473_-	NA	NA|335aa|down_8|NZ_CP015896.1_1483519_1484524_-	pfam06030, DUF916, Bacterial protein of unknown function (DUF916)	NA|316aa|down_9|NZ_CP015896.1_1485786_1486734_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]
GCF_002078415.1_ASM207841v1	NZ_CP015896	Lactococcus lactis subsp. lactis strain 229 chromosome, complete genome	2	1935433-1935527	2	CRISPRCasFinder	no		cas3,DEDDh,csa3,DinG	Orphan	TTTATTACTGACAGACTTGTCAGC	24	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,DinG,RT	NA|117aa|up_4|NZ_CP015896.1_1931629_1931980_+,NA|98aa|up_3|NZ_CP015896.1_1931954_1932248_+,NA	NA|102aa|up_9|NZ_CP015896.1_1927240_1927546_-	COG4357, COG4357, Zinc finger domain containing protein (CHY type) [Function unknown]	NA|324aa|up_8|NZ_CP015896.1_1927562_1928534_-	PRK11886, PRK11886, bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA	NA|190aa|up_7|NZ_CP015896.1_1928539_1929109_-	COG1268, BioY, Uncharacterized conserved protein [General function prediction only]	NA|414aa|up_6|NZ_CP015896.1_1929253_1930495_+	cd17633, AFD_YhfT-like, fatty acid-CoA ligase VraA	NA|383aa|up_5|NZ_CP015896.1_1930484_1931633_+	TIGR01930, 3-ketoacyl-CoA_thiolase, acetyl-CoA acetyltransferases	NA|117aa|up_4|NZ_CP015896.1_1931629_1931980_+	NA	NA|98aa|up_3|NZ_CP015896.1_1931954_1932248_+	NA	NA|252aa|up_2|NZ_CP015896.1_1932235_1932991_+	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs	NA|282aa|up_1|NZ_CP015896.1_1933013_1933859_+	TIGR03151, enACPred_II, putative enoyl-[acyl-carrier-protein] reductase II	NA|471aa|up_0|NZ_CP015896.1_1933999_1935412_-	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB	NA|153aa|down_0|NZ_CP015896.1_1935645_1936104_-	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family	NA|161aa|down_1|NZ_CP015896.1_1936219_1936702_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|406aa|down_2|NZ_CP015896.1_1936703_1937921_-	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily	NA|419aa|down_3|NZ_CP015896.1_1937920_1939177_-	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]	NA|257aa|down_4|NZ_CP015896.1_1939314_1940085_-	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|444aa|down_5|NZ_CP015896.1_1940259_1941591_-	cd06853, GT_WecA_like, This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins	NA|234aa|down_6|NZ_CP015896.1_1941593_1942295_-	COG4862, MecA, Negative regulator of genetic competence, sporulation and motility [Posttranslational modification, protein turnover, chaperones / Signal transduction mechanisms / Cell motility and secretion]	NA|245aa|down_7|NZ_CP015896.1_1942424_1943159_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|229aa|down_8|NZ_CP015896.1_1943158_1943845_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|303aa|down_9|NZ_CP015896.1_1943992_1944901_-	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]
