assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002078255.1_ASM207825v1	NZ_CP013922	Staphylococcus xylosus strain S170, complete genome	1	539174-539262	1	CRISPRCasFinder	no		WYL,cas3,csa3,DEDDh,DinG	Orphan	AGCGTCAGTATCTTGTACAGTAGAAGTAG	29	1	1	539203-539233	NZ_CP013922.1_539926-539956	NA	1	1	Orphan	WYL,cas3,csa3,DEDDh,DinG	NA,NA	NA|190aa|up_9|NZ_CP013922.1_525636_526206_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|313aa|up_8|NZ_CP013922.1_526279_527218_-	PRK06080, PRK06080, 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Validated	NA|451aa|up_7|NZ_CP013922.1_527404_528757_+	TIGR00543, Salicylate_biosynthesis_isochorismate_synthase, isochorismate synthases	NA|561aa|up_6|NZ_CP013922.1_528749_530432_+	COG1165, MenD, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [Coenzyme metabolism]	NA|269aa|up_5|NZ_CP013922.1_530418_531225_+	TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase	NA|273aa|up_4|NZ_CP013922.1_531217_532036_+	PRK07396, PRK07396, dihydroxynaphthoic acid synthetase; Validated	NA|153aa|up_3|NZ_CP013922.1_532369_532828_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|388aa|up_2|NZ_CP013922.1_532992_534156_-	PRK07683, PRK07683, aminotransferase A; Validated	NA|335aa|up_1|NZ_CP013922.1_534279_535284_-	COG3594, NolL, Fucose 4-O-acetylase and related acetyltransferases [Carbohydrate transport and metabolism]	NA|141aa|up_0|NZ_CP013922.1_535491_535914_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|141aa|down_0|NZ_CP013922.1_540788_541211_-	COG2153, ElaA, Predicted acyltransferase [General function prediction only]	NA|157aa|down_1|NZ_CP013922.1_541281_541752_-	pfam10804, DUF2538, Protein of unknown function (DUF2538)	NA|439aa|down_2|NZ_CP013922.1_541773_543090_-	COG1316, LytR, Transcriptional regulator [Transcription]	NA|554aa|down_3|NZ_CP013922.1_543535_545197_+	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1)	NA|392aa|down_4|NZ_CP013922.1_545216_546392_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|303aa|down_5|NZ_CP013922.1_546500_547409_-	PRK10768, PRK10768, ribonucleoside hydrolase RihC; Provisional	NA|97aa|down_6|NZ_CP013922.1_547586_547877_-	COG3125, CyoD, Heme/copper-type cytochrome/quinol oxidase, subunit 4 [Energy production and conversion]	NA|202aa|down_7|NZ_CP013922.1_547873_548479_-	TIGR02897, AA3-600_quinol_oxidase_subunit_III, cytochrome aa3 quinol oxidase, subunit III	NA|663aa|down_8|NZ_CP013922.1_548468_550457_-	TIGR02882, cytochrome_aa3_quinol_oxidase_subunit_I, cytochrome aa3 quinol oxidase, subunit I	NA|374aa|down_9|NZ_CP013922.1_550456_551578_-	TIGR01432, AA3-600_quinol_oxidase_subunit_II, cytochrome aa3 quinol oxidase, subunit II
GCF_002078255.1_ASM207825v1	NZ_CP013922	Staphylococcus xylosus strain S170, complete genome	2	1387197-1387283	2	CRISPRCasFinder	no		WYL,cas3,csa3,DEDDh,DinG	Orphan	TTTTATGTGATTTATTTCACAAATTAAATAT	31	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,csa3,DEDDh,DinG	NA,NA|75aa|down_9|NZ_CP013922.1_1397589_1397814_-	NA|233aa|up_9|NZ_CP013922.1_1375427_1376126_-	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis]	NA|546aa|up_8|NZ_CP013922.1_1376122_1377760_-	cd13124, MATE_SpoVB_like, Stage V sporulation protein B, also known as Stage III sporulation protein F, and related proteins	NA|425aa|up_7|NZ_CP013922.1_1377889_1379164_+	pfam03486, HI0933_like, HI0933-like protein	NA|104aa|up_6|NZ_CP013922.1_1379511_1379823_-	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|805aa|up_5|NZ_CP013922.1_1379842_1382257_-	PRK00390, leuS, leucyl-tRNA synthetase; Validated	NA|390aa|up_4|NZ_CP013922.1_1382775_1383945_-	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|318aa|up_3|NZ_CP013922.1_1384054_1385008_+	COG1242, COG1242, Predicted Fe-S oxidoreductase [General function prediction only]	NA|187aa|up_2|NZ_CP013922.1_1385004_1385565_+	pfam06962, rRNA_methylase, Putative rRNA methylase	NA|134aa|up_1|NZ_CP013922.1_1385660_1386062_-	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|319aa|up_0|NZ_CP013922.1_1386212_1387169_-	PRK00066, ldh, L-lactate dehydrogenase; Reviewed	NA|275aa|down_0|NZ_CP013922.1_1387387_1388212_-	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|334aa|down_1|NZ_CP013922.1_1388478_1389480_+	COG0506, PutA, Proline dehydrogenase [Amino acid transport and metabolism]	NA|153aa|down_2|NZ_CP013922.1_1389677_1390136_-	PRK00061, ribH, 6,7-dimethyl-8-ribityllumazine synthase; Provisional	NA|394aa|down_3|NZ_CP013922.1_1390149_1391331_-	PRK09311, PRK09311, bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA|211aa|down_4|NZ_CP013922.1_1391341_1391974_-	PRK09289, PRK09289, riboflavin synthase	NA|348aa|down_5|NZ_CP013922.1_1391980_1393024_-	TIGR00326, eubact_ribD, riboflavin biosynthesis protein RibD	NA|488aa|down_6|NZ_CP013922.1_1393587_1395051_-	COG4529, COG4529, Uncharacterized protein conserved in bacteria [Function unknown]	NA|309aa|down_7|NZ_CP013922.1_1395221_1396148_+	cd13608, PBP2_OpuCC_like, Substrate-binding protein OpuCC of ABC-type osmoregulatory transporter and related proteins; the type 2 periplasmic-binding protein fold	NA|285aa|down_8|NZ_CP013922.1_1396570_1397425_-	COG4193, LytD, Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism]	NA|75aa|down_9|NZ_CP013922.1_1397589_1397814_-	NA
GCF_002078255.1_ASM207825v1	NZ_CP013922	Staphylococcus xylosus strain S170, complete genome	3	2380748-2380848	3	CRISPRCasFinder	no		WYL,cas3,csa3,DEDDh,DinG	Orphan	AAACCATCTGTAACTTGTTGATTTCC	26	0	0	NA	NA	NA	1	1	Orphan	WYL,cas3,csa3,DEDDh,DinG	NA,NA	NA|256aa|up_9|NZ_CP013922.1_2363377_2364145_-	PRK00208, thiG, thiazole synthase; Reviewed	NA|67aa|up_8|NZ_CP013922.1_2364146_2364347_-	PRK11840, PRK11840, bifunctional sulfur carrier protein/thiazole synthase protein; Provisional	NA|367aa|up_7|NZ_CP013922.1_2364347_2365448_-	TIGR02352, Glycine_oxidase, glycine oxidase ThiO	NA|195aa|up_6|NZ_CP013922.1_2365440_2366025_-	cd00564, TMP_TenI, Thiamine monophosphate synthase (TMP synthase)/TenI	NA|496aa|up_5|NZ_CP013922.1_2366352_2367840_-	cd07808, FGGY_D-XK_EcXK-like, Escherichia coli xylulokinase-like D-xylulose kinases; a subgroup of the FGGY family of carbohydrate kinases	NA|308aa|up_4|NZ_CP013922.1_2367941_2368865_-	COG0679, COG0679, Predicted permeases [General function prediction only]	NA|2606aa|up_3|NZ_CP013922.1_2369605_2377423_-	pfam04650, YSIRK_signal, YSIRK type signal peptide	NA|274aa|up_2|NZ_CP013922.1_2377742_2378564_+	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|189aa|up_1|NZ_CP013922.1_2378655_2379222_-	pfam13273, DUF4064, Protein of unknown function (DUF4064)	NA|151aa|up_0|NZ_CP013922.1_2379524_2379977_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|384aa|down_0|NZ_CP013922.1_2382038_2383190_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|441aa|down_1|NZ_CP013922.1_2383400_2384723_+	TIGR02630, Xylose_isomerase, xylose isomerase	NA|497aa|down_2|NZ_CP013922.1_2384728_2386219_+	TIGR01312, Xylulose_kinase, D-xylulose kinase	NA|483aa|down_3|NZ_CP013922.1_2386239_2387688_+	PRK10077, xylE, D-xylose transporter XylE; Provisional	NA|184aa|down_4|NZ_CP013922.1_2387758_2388310_-	COG3479, COG3479, Phenolic acid decarboxylase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|182aa|down_5|NZ_CP013922.1_2388403_2388949_+	COG1695, COG1695, Predicted transcriptional regulators [Transcription]	NA|365aa|down_6|NZ_CP013922.1_2389016_2390111_-	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|243aa|down_7|NZ_CP013922.1_2390107_2390836_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|44aa|down_8|NZ_CP013922.1_2391317_2391449_+	pfam05480, Staph_haemo, Staphylococcus haemolytic protein	NA|468aa|down_9|NZ_CP013922.1_2391551_2392955_-	cd17359, MFS_XylE_like, D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily
