assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002073835.2_ASM207383v2	NZ_CP020451	Streptococcus salivarius strain FDAARGOS_259 chromosome, complete genome	1	43739-43813	1	CRISPRCasFinder	no		csa3,DEDDh,cas3,WYL,DinG	Orphan	GACCTAAAAAGGTCCACTGGAACTT	25	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,WYL,DinG	NA|260aa|up_4|NZ_CP020451.2_38220_39000_-,NA|124aa|down_9|NZ_CP020451.2_52602_52974_-	NA|63aa|up_9|NZ_CP020451.2_33619_33808_-	pfam11772, EpuA, DNA-directed RNA polymerase subunit beta	NA|424aa|up_8|NZ_CP020451.2_33809_35081_-	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated	NA|79aa|up_7|NZ_CP020451.2_35148_35385_-	TIGR02327, conserved_hypothetical_protein, conserved hypothetical integral membrane protein	NA|368aa|up_6|NZ_CP020451.2_35655_36759_-	pfam01270, Glyco_hydro_8, Glycosyl hydrolases family 8	NA|437aa|up_5|NZ_CP020451.2_36767_38078_-	cd06423, CESA_like, CESA_like is  the cellulose synthase superfamily	NA|260aa|up_4|NZ_CP020451.2_38220_39000_-	NA	NA|384aa|up_3|NZ_CP020451.2_38996_40148_-	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]	NA|398aa|up_2|NZ_CP020451.2_41013_42207_-	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|313aa|up_1|NZ_CP020451.2_42486_43425_+	PRK11886, PRK11886, bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA	NA|62aa|up_0|NZ_CP020451.2_43411_43597_-	pfam11676, DUF3272, Protein of unknown function (DUF3272)	NA|551aa|down_0|NZ_CP020451.2_43814_45467_-	PRK05563, PRK05563, DNA polymerase III subunits gamma and tau; Validated	NA|170aa|down_1|NZ_CP020451.2_45466_45976_-	COG1956, COG1956, GAF domain-containing protein [Signal transduction mechanisms]	NA|304aa|down_2|NZ_CP020451.2_46000_46912_-	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed	NA|59aa|down_3|NZ_CP020451.2_46987_47164_+	pfam11240, DUF3042, Protein of unknown function (DUF3042)	NA|116aa|down_4|NZ_CP020451.2_48150_48498_-	PRK05338, rplS, 50S ribosomal protein L19; Provisional	NA|409aa|down_5|NZ_CP020451.2_48625_49852_-	cd03682, ClC_sycA_like, ClC sycA-like chloride channel proteins	NA|95aa|down_6|NZ_CP020451.2_49848_50133_-	PRK07248, PRK07248, chorismate mutase	NA|512aa|down_7|NZ_CP020451.2_50206_51742_-	cd01031, EriC, ClC chloride channel EriC	NA|148aa|down_8|NZ_CP020451.2_51791_52235_-	PRK07308, PRK07308, flavodoxin; Validated	NA|124aa|down_9|NZ_CP020451.2_52602_52974_-	NA
GCF_002073835.2_ASM207383v2	NZ_CP020451	Streptococcus salivarius strain FDAARGOS_259 chromosome, complete genome	2	212104-212341	1	PILER-CR	no		csa3,DEDDh,cas3,WYL,DinG	Orphan	GAGACCACTTCACTATTTGATGCTTCGGAAACTGGAGTGCTTGATCCTGC	50	0	0	NA	NA	NA	2	2	Orphan	csa3,DEDDh,cas3,WYL,DinG	NA|158aa|up_7|NZ_CP020451.2_204611_205085_-,NA|209aa|down_7|NZ_CP020451.2_221306_221933_+,NA|130aa|down_9|NZ_CP020451.2_222963_223353_+	NA|941aa|up_9|NZ_CP020451.2_201223_204046_-	PRK00009, PRK00009, phosphoenolpyruvate carboxylase; Reviewed	NA|132aa|up_8|NZ_CP020451.2_204219_204615_-	pfam14478, DUF4430, Domain of unknown function (DUF4430)	NA|158aa|up_7|NZ_CP020451.2_204611_205085_-	NA	NA|243aa|up_6|NZ_CP020451.2_205374_206103_+	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]	NA|280aa|up_5|NZ_CP020451.2_206092_206932_+	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism]	NA|308aa|up_4|NZ_CP020451.2_206951_207875_+	cd01137, PsaA, Metal binding protein PsaA	NA|216aa|up_3|NZ_CP020451.2_207954_208602_+	COG1321, TroR, Mn-dependent transcriptional regulator [Transcription]	NA|300aa|up_2|NZ_CP020451.2_208652_209552_-	PRK04897, PRK04897, heat shock protein HtpX; Provisional	NA|187aa|up_1|NZ_CP020451.2_209553_210114_-	COG1704, LemA, Uncharacterized conserved protein [Function unknown]	NA|334aa|up_0|NZ_CP020451.2_210259_211261_-	pfam13930, Endonuclea_NS_2, DNA/RNA non-specific endonuclease	NA|300aa|down_0|NZ_CP020451.2_215090_215990_-	TIGR01784, Uncharacterized_protein_pSLT051, conserved hypothetical protein (putative transposase or invertase)	NA|565aa|down_1|NZ_CP020451.2_216153_217848_-	pfam09848, DUF2075, Uncharacterized conserved protein (DUF2075)	NA|110aa|down_2|NZ_CP020451.2_217857_218187_-	cd11537, NTP-PPase_RS21-C6_like, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3	NA|101aa|down_3|NZ_CP020451.2_218348_218651_-	pfam01381, HTH_3, Helix-turn-helix	NA|118aa|down_4|NZ_CP020451.2_218652_219006_-	COG4679, COG4679, Phage-related protein [Function unknown]	NA|255aa|down_5|NZ_CP020451.2_219243_220008_-	cd05346, SDR_c5, classical (c) SDR, subgroup 5	NA|386aa|down_6|NZ_CP020451.2_220039_221197_-	pfam11187, DUF2974, Protein of unknown function (DUF2974)	NA|209aa|down_7|NZ_CP020451.2_221306_221933_+	NA	NA|281aa|down_8|NZ_CP020451.2_221969_222812_-	pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase	NA|130aa|down_9|NZ_CP020451.2_222963_223353_+	NA
GCF_002073835.2_ASM207383v2	NZ_CP020451	Streptococcus salivarius strain FDAARGOS_259 chromosome, complete genome	3	771234-771334	2	CRISPRCasFinder	no		csa3,DEDDh,cas3,WYL,DinG	Orphan	AAAAATTGGTATAGTCTGATTTT	23	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,WYL,DinG	NA,NA	NA|250aa|up_9|NZ_CP020451.2_758406_759156_-	PRK14830, PRK14830, undecaprenyl pyrophosphate synthase; Provisional	NA|110aa|up_8|NZ_CP020451.2_759284_759614_-	PRK06531, yajC, preprotein translocase subunit YajC; Validated	NA|239aa|up_7|NZ_CP020451.2_759739_760456_-	PRK12378, PRK12378, YebC/PmpR family DNA-binding transcriptional regulator	NA|526aa|up_6|NZ_CP020451.2_760611_762189_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|291aa|up_5|NZ_CP020451.2_762342_763215_-	TIGR01716, HTH-type_transcriptional_regulator_rgg, transcriptional activator, Rgg/GadR/MutR family, C-terminal domain	NA|382aa|up_4|NZ_CP020451.2_763833_764979_-	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional	NA|146aa|up_3|NZ_CP020451.2_764988_765426_-	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]	NA|655aa|up_2|NZ_CP020451.2_765415_767380_-	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|590aa|up_1|NZ_CP020451.2_767415_769185_-	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|605aa|up_0|NZ_CP020451.2_769371_771186_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|419aa|down_0|NZ_CP020451.2_771498_772755_+	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|450aa|down_1|NZ_CP020451.2_772827_774177_-	PRK14097, pgi, glucose-6-phosphate isomerase; Provisional	NA|272aa|down_2|NZ_CP020451.2_774280_775096_-	cd09079, RgfB-like, Streptococcus agalactiae RgfB, part of a putative two component signal transduction system, and related proteins	NA|729aa|down_3|NZ_CP020451.2_775193_777380_-	TIGR02003, PTS_system_glucose-specific_IIBC_component, PTS system, IIBC component	NA|313aa|down_4|NZ_CP020451.2_777534_778473_-	TIGR00946, Uncharacterized_transporter_MTH_1382, he Auxin Efflux Carrier (AEC) Family	NA|271aa|down_5|NZ_CP020451.2_778636_779449_-	pfam00950, ABC-3, ABC 3 transport family	NA|236aa|down_6|NZ_CP020451.2_779441_780149_-	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]	NA|148aa|down_7|NZ_CP020451.2_780150_780594_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|326aa|down_8|NZ_CP020451.2_780758_781736_-	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family	NA|289aa|down_9|NZ_CP020451.2_781728_782595_-	PRK00114, hslO, Hsp33 family molecular chaperone HslO
GCF_002073835.2_ASM207383v2	NZ_CP020451	Streptococcus salivarius strain FDAARGOS_259 chromosome, complete genome	4	2249645-2249784	3	CRISPRCasFinder	no		csa3,DEDDh,cas3,WYL,DinG	Orphan	ACTTTTGGTGTTGGTGGCGTTGGTGCCGTTGGACCTGTTGGTGGTGTTGGTTC	53	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,WYL,DinG	NA,NA	NA|231aa|up_9|NZ_CP020451.2_2239469_2240162_-	TIGR01006, Capsular_polysaccharide_biosynthesis_protein_CapA, polysaccharide export protein, MPA1 family, Gram-positive type	NA|244aa|up_8|NZ_CP020451.2_2240170_2240902_-	COG4464, CapC, Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]	NA|487aa|up_7|NZ_CP020451.2_2240902_2242363_-	pfam03816, LytR_cpsA_psr, Cell envelope-related transcriptional attenuator domain	NA|237aa|up_6|NZ_CP020451.2_2242703_2243414_-	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|238aa|up_5|NZ_CP020451.2_2243811_2244525_-	PRK08250, PRK08250, glutamine amidotransferase; Provisional	NA|416aa|up_4|NZ_CP020451.2_2244521_2245769_-	cd01033, ClC_like, Putative ClC chloride channel	NA|270aa|up_3|NZ_CP020451.2_2245772_2246582_-	PRK08202, PRK08202, purine nucleoside phosphorylase; Provisional	NA|182aa|up_2|NZ_CP020451.2_2246600_2247146_-	COG3797, COG3797, Uncharacterized protein conserved in bacteria [Function unknown]	NA|404aa|up_1|NZ_CP020451.2_2247147_2248359_-	PRK05362, PRK05362, phosphopentomutase; Provisional	NA|227aa|up_0|NZ_CP020451.2_2248479_2249160_-	PRK00702, PRK00702, ribose-5-phosphate isomerase RpiA	NA|1263aa|down_0|NZ_CP020451.2_2252893_2256682_-	pfam08363, GbpC, Glucan-binding protein C	NA|195aa|down_1|NZ_CP020451.2_2257056_2257641_-	cd10033, UDG_like, uncharacterized family of the uracil-DNA glycosylase superfamily	NA|469aa|down_2|NZ_CP020451.2_2257679_2259086_-	PRK07318, PRK07318, dipeptidase PepV; Reviewed	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
