assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002072775.2_ASM207277v2	NZ_CP020381	Mycobacterium tuberculosis strain MTB1, complete genome	1	334959-335069	1	PILER-CR	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGTTGCCGCCGTTGCCGATC	24	0	0	NA	NA	NA	2	2	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|61aa|up_0|NZ_CP020381.2_333291_333474_-,NA	NA|398aa|up_9|NZ_CP020381.2_323469_324663_-	COG3285, COG3285, Predicted eukaryotic-type DNA primase [DNA replication, recombination, and repair]	NA|561aa|up_8|NZ_CP020381.2_324698_326381_+	PRK07788, PRK07788, acyl-CoA synthetase; Validated	NA|732aa|up_7|NZ_CP020381.2_326397_328593_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|378aa|up_6|NZ_CP020381.2_328706_329840_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|207aa|up_5|NZ_CP020381.2_329836_330457_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|194aa|up_4|NZ_CP020381.2_330553_331135_+	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|242aa|up_3|NZ_CP020381.2_331064_331790_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|307aa|up_2|NZ_CP020381.2_331879_332800_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	NA|143aa|up_1|NZ_CP020381.2_332839_333268_-	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins	NA|61aa|up_0|NZ_CP020381.2_333291_333474_-	NA	NA|900aa|down_0|NZ_CP020381.2_336639_339339_-	pfam00934, PE, PE family	NA|838aa|down_1|NZ_CP020381.2_339588_342102_-	pfam00934, PE, PE family	NA|537aa|down_2|NZ_CP020381.2_342392_344003_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|303aa|down_3|NZ_CP020381.2_344026_344935_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|632aa|down_4|NZ_CP020381.2_345158_347054_+	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA	NA|539aa|down_5|NZ_CP020381.2_347050_348667_+	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|1331aa|down_6|NZ_CP020381.2_348663_352656_+	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|103aa|down_7|NZ_CP020381.2_352652_352961_+	pfam00934, PE, PE family	NA|514aa|down_8|NZ_CP020381.2_352963_354505_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|98aa|down_9|NZ_CP020381.2_354553_354847_+	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target
GCF_002072775.2_ASM207277v2	NZ_CP020381	Mycobacterium tuberculosis strain MTB1, complete genome	2	341133-341355	2	PILER-CR	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	ATCCGCCGCTACCGCCGGTGCCGCCGGCGCCGAACAGCCCGCC	43	0	0	NA	NA	NA	2	2	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|61aa|up_2|NZ_CP020381.2_333291_333474_-,NA	NA|732aa|up_9|NZ_CP020381.2_326397_328593_-	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|378aa|up_8|NZ_CP020381.2_328706_329840_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|207aa|up_7|NZ_CP020381.2_329836_330457_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|194aa|up_6|NZ_CP020381.2_330553_331135_+	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|242aa|up_5|NZ_CP020381.2_331064_331790_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|307aa|up_4|NZ_CP020381.2_331879_332800_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	NA|143aa|up_3|NZ_CP020381.2_332839_333268_-	cd18678, PIN_MtVapC25_VapC33-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC25, VapC33, and related proteins	NA|61aa|up_2|NZ_CP020381.2_333291_333474_-	NA	NA|936aa|up_1|NZ_CP020381.2_333568_336376_-	pfam00934, PE, PE family	NA|900aa|up_0|NZ_CP020381.2_336639_339339_-	pfam00934, PE, PE family	NA|537aa|down_0|NZ_CP020381.2_342392_344003_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|303aa|down_1|NZ_CP020381.2_344026_344935_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|632aa|down_2|NZ_CP020381.2_345158_347054_+	TIGR03922, T7SS_EccA, type VII secretion AAA-ATPase EccA	NA|539aa|down_3|NZ_CP020381.2_347050_348667_+	pfam05108, T7SS_ESX1_EccB, Type VII secretion system ESX-1, transport TM domain B	NA|1331aa|down_4|NZ_CP020381.2_348663_352656_+	TIGR03924, T7SS_EccC_a, type VII secretion protein EccCa	NA|103aa|down_5|NZ_CP020381.2_352652_352961_+	pfam00934, PE, PE family	NA|514aa|down_6|NZ_CP020381.2_352963_354505_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|98aa|down_7|NZ_CP020381.2_354553_354847_+	TIGR03930, WXG100_ESAT6, WXG100 family type VII secretion target	NA|97aa|down_8|NZ_CP020381.2_354876_355167_+	COG4842, COG4842, Uncharacterized protein conserved in bacteria [Function unknown]	NA|296aa|down_9|NZ_CP020381.2_355177_356065_+	pfam14011, ESX-1_EspG, EspG family
GCF_002072775.2_ASM207277v2	NZ_CP020381	Mycobacterium tuberculosis strain MTB1, complete genome	3	369488-370186	1	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	TTCGCGAAGCCGATGTTGTAGCTGCCGGTGTTG	33	2	2	369776-369817|369851-369883	NZ_CP020381.2_377807-377848|NZ_CP020381.2_376622-376654	NA	10	10	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|101aa|up_4|NZ_CP020381.2_366500_366803_+,NA|161aa|down_1|NZ_CP020381.2_379596_380079_-,NA|410aa|down_5|NZ_CP020381.2_382195_383425_+	NA|262aa|up_9|NZ_CP020381.2_361195_361981_+	PRK14103, PRK14103, trans-aconitate 2-methyltransferase; Provisional	NA|268aa|up_8|NZ_CP020381.2_361969_362773_-	COG4424, COG4424, Uncharacterized protein conserved in bacteria [Function unknown]	NA|466aa|up_7|NZ_CP020381.2_362782_364180_-	cd16027, SGSH, N-sulfoglucosamine sulfohydrolase (SGSH; sulfamidase)	NA|592aa|up_6|NZ_CP020381.2_364358_366134_+	pfam00934, PE, PE family	NA|76aa|up_5|NZ_CP020381.2_366276_366504_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|101aa|up_4|NZ_CP020381.2_366500_366803_+	NA	NA|74aa|up_3|NZ_CP020381.2_366850_367072_+	PHA01748, PHA01748, hypothetical protein	NA|142aa|up_2|NZ_CP020381.2_367068_367494_+	cd18755, PIN_MtVapC3_VapC21-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins	NA|211aa|up_1|NZ_CP020381.2_367629_368262_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|303aa|up_0|NZ_CP020381.2_368258_369167_+	cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs	NA|224aa|down_0|NZ_CP020381.2_378937_379609_+	TIGR02476, BluB, 5,6-dimethylbenzimidazole synthase	NA|161aa|down_1|NZ_CP020381.2_379596_380079_-	NA	NA|239aa|down_2|NZ_CP020381.2_380136_380853_+	cd03392, PAP2_like_2, PAP2_like_2 proteins	NA|219aa|down_3|NZ_CP020381.2_380954_381611_+	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown]	NA|164aa|down_4|NZ_CP020381.2_381680_382172_-	pfam13577, SnoaL_4, SnoaL-like domain	NA|410aa|down_5|NZ_CP020381.2_382195_383425_+	NA	NA|621aa|down_6|NZ_CP020381.2_383579_385442_+	COG0443, DnaK, Molecular chaperone [Posttranslational modification, protein turnover, chaperones]	NA|129aa|down_7|NZ_CP020381.2_385513_385900_+	COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones]	NA|221aa|down_8|NZ_CP020381.2_385902_386565_-	pfam11259, DUF3060, Protein of unknown function (DUF3060)	NA|295aa|down_9|NZ_CP020381.2_386625_387510_+	COG2273, SKN1, Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism]
GCF_002072775.2_ASM207277v2	NZ_CP020381	Mycobacterium tuberculosis strain MTB1, complete genome	4	635170-635307	1	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGACCACGCCGGTG	18	2	3	635188-635205|635188-635205|635272-635289	NZ_CP020381.2_22467-22484|NZ_CP020381.2_1416707-1416724|NZ_CP020381.2_975291-975308	NA	3	3	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|54aa|up_7|NZ_CP020381.2_625924_626086_-,NA|478aa|up_0|NZ_CP020381.2_632185_633619_-,NA|450aa|down_2|NZ_CP020381.2_636942_638292_-,NA|93aa|down_5|NZ_CP020381.2_639822_640101_-	NA|325aa|up_9|NZ_CP020381.2_623694_624669_+	TIGR03144, cytochrome_c_biogenesis_protein_chloroplast, cytochrome c-type biogenesis protein CcsB	NA|406aa|up_8|NZ_CP020381.2_624710_625928_+	COG0455, flhG, Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility]	NA|54aa|up_7|NZ_CP020381.2_625924_626086_-	NA	NA|106aa|up_6|NZ_CP020381.2_626132_626450_+	pfam14012, DUF4229, Protein of unknown function (DUF4229)	NA|623aa|up_5|NZ_CP020381.2_626596_628465_+	pfam00934, PE, PE family	NA|336aa|up_4|NZ_CP020381.2_628360_629368_-	TIGR00747, 3-oxoacyl-_synthase_3, 3-oxoacyl-(acyl-carrier-protein) synthase III	NA|293aa|up_3|NZ_CP020381.2_629449_630328_-	TIGR00751, 14-dihydroxy-2-naphthoate_octaprenyltransferase, 1,4-dihydroxy-2-naphthoate octaprenyltransferase	NA|265aa|up_2|NZ_CP020381.2_630344_631139_+	PRK07823, PRK07823, S-methyl-5'-thioadenosine phosphorylase	NA|347aa|up_1|NZ_CP020381.2_631135_632176_+	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs	NA|478aa|up_0|NZ_CP020381.2_632185_633619_-	NA	NA|211aa|down_0|NZ_CP020381.2_635630_636263_+	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	NA|221aa|down_1|NZ_CP020381.2_636259_636922_+	COG3222, COG3222, Uncharacterized protein conserved in bacteria [Function unknown]	NA|450aa|down_2|NZ_CP020381.2_636942_638292_-	NA	NA|381aa|down_3|NZ_CP020381.2_638303_639446_-	PRK07824, PRK07824, o-succinylbenzoate--CoA ligase	NA|101aa|down_4|NZ_CP020381.2_639460_639763_-	pfam11829, DUF3349, Protein of unknown function (DUF3349)	NA|93aa|down_5|NZ_CP020381.2_639822_640101_-	NA	NA|418aa|down_6|NZ_CP020381.2_640097_641351_-	COG0306, PitA, Phosphate/sulphate permeases [Inorganic ion transport and metabolism]	NA|129aa|down_7|NZ_CP020381.2_641470_641857_-	cd07264, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|295aa|down_8|NZ_CP020381.2_641919_642804_-	PRK05866, PRK05866, SDR family oxidoreductase	NA|301aa|down_9|NZ_CP020381.2_642899_643802_-	PRK08321, PRK08321, 1,4-dihydroxy-2-naphthoyl-CoA synthase
GCF_002072775.2_ASM207277v2	NZ_CP020381	Mycobacterium tuberculosis strain MTB1, complete genome	5	694780-694856	2	CRISPRCasFinder	no	c2c9_V-U4	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type V-U4	TGAGGTGCGGCGTGAGCGCGGGT	23	0	0	NA	NA	NA	1	1	TypeV-U4	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA	NA|72aa|up_9|NZ_CP020381.2_680464_680680_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|136aa|up_8|NZ_CP020381.2_680676_681084_+	cd18696, PIN_MtVapC26-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC26 and related proteins	NA|229aa|up_7|NZ_CP020381.2_681143_681830_-	pfam10738, Lpp-LpqN, Probable lipoprotein LpqN	NA|878aa|up_6|NZ_CP020381.2_681983_684617_+	COG3537, COG3537, Putative alpha-1,2-mannosidase [Carbohydrate transport and metabolism]	NA|796aa|up_5|NZ_CP020381.2_684639_687027_-	pfam03706, LPG_synthase_TM, Lysylphosphatidylglycerol synthase TM region	NA|241aa|up_4|NZ_CP020381.2_687164_687887_+	COG2186, FadR, Transcriptional regulators [Transcription]	NA|266aa|up_3|NZ_CP020381.2_687883_688681_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|296aa|up_2|NZ_CP020381.2_688682_689570_+	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|405aa|up_1|NZ_CP020381.2_689575_690790_+	pfam11887, Mce4_CUP1, Cholesterol uptake porter CUP1 of Mce4, putative	NA|482aa|up_0|NZ_CP020381.2_691813_693259_+	TIGR00996, Mtu_fam_mce, virulence factor Mce family protein	NA|517aa|down_0|NZ_CP020381.2_695991_697542_+	COG1463, Ttg2C, ABC-type transport system involved in resistance to organic solvents, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|131aa|down_1|NZ_CP020381.2_697593_697986_-	cd18768, PIN_MtVapC4-C5-like, VapC-like PIN domain of Mycobacterium tuberculosis VapC4, VapC5, and related proteins	NA|86aa|down_2|NZ_CP020381.2_697982_698240_-	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning]	NA|412aa|down_3|NZ_CP020381.2_698422_699658_-	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|138aa|down_4|NZ_CP020381.2_699908_700322_-	cd18681, PIN_MtVapC27-VapC40_like, VapC-like PIN domain of Mycobacterium tuberculosis VapC27, and VapC40, and related proteins	NA|79aa|down_5|NZ_CP020381.2_700318_700555_-	COG2002, AbrB, Regulators of stationary/sporulation gene expression [Transcription]	NA|169aa|down_6|NZ_CP020381.2_700658_701165_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|157aa|down_7|NZ_CP020381.2_701278_701749_-	PRK10755, PRK10755, two-component system sensor histidine kinase PmrB	NA|254aa|down_8|NZ_CP020381.2_701792_702554_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|104aa|down_9|NZ_CP020381.2_702610_702922_+	pfam03413, PepSY, Peptidase propeptide and YPEB domain
GCF_002072775.2_ASM207277v2	NZ_CP020381	Mycobacterium tuberculosis strain MTB1, complete genome	6	928712-929659	2	CRT	no	csa3	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type I-A	CGGGGCCGGCGGNNCCGGCGG	21	1	3	929495-929530|929495-929530|929495-929530	NZ_CP020381.2_677883-677848|NZ_CP020381.2_1218577-1218612|NZ_CP020381.2_2427407-2427372	NA	19	19	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|184aa|down_2|NZ_CP020381.2_933669_934221_-,NA|81aa|down_8|NZ_CP020381.2_939684_939927_+	NA|685aa|up_9|NZ_CP020381.2_916348_918403_-	TIGR00350, Transcriptional_regulator_LytR, cell envelope-related function transcriptional attenuator common domain	NA|390aa|up_8|NZ_CP020381.2_918568_919738_-	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family	NA|339aa|up_7|NZ_CP020381.2_919825_920842_-	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain	NA|214aa|up_6|NZ_CP020381.2_921003_921645_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|352aa|up_5|NZ_CP020381.2_921725_922781_+	COG3662, COG3662, Uncharacterized protein conserved in bacteria [Function unknown]	csa3|131aa|up_4|NZ_CP020381.2_922832_923225_-	smart00418, HTH_ARSR, helix_turn_helix, Arsenical Resistance Operon Repressor	NA|141aa|up_3|NZ_CP020381.2_923282_923705_-	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis]	NA|97aa|up_2|NZ_CP020381.2_923666_923957_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|302aa|up_1|NZ_CP020381.2_924061_924967_+	COG3315, COG3315, O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]	NA|272aa|up_0|NZ_CP020381.2_924985_925801_-	TIGR04255, hypothetical_protein, TIGR04255 family protein	NA|883aa|down_0|NZ_CP020381.2_929928_932577_-	pfam00934, PE, PE family	NA|215aa|down_1|NZ_CP020381.2_933044_933689_+	pfam14032, PknH_C, PknH-like extracellular domain	NA|184aa|down_2|NZ_CP020381.2_933669_934221_-	NA	NA|218aa|down_3|NZ_CP020381.2_934370_935024_-	COG4849, COG4849, Predicted nucleotidyltransferase [General function prediction    only]	NA|343aa|down_4|NZ_CP020381.2_935094_936123_-	COG4861, COG4861, Uncharacterized protein conserved in bacteria [Function unknown]	NA|257aa|down_5|NZ_CP020381.2_936811_937582_+	pfam01427, Peptidase_M15, D-ala-D-ala dipeptidase	NA|271aa|down_6|NZ_CP020381.2_937668_938481_+	pfam13847, Methyltransf_31, Methyltransferase domain	NA|287aa|down_7|NZ_CP020381.2_938548_939409_-	TIGR01250, Proline_iminopeptidase, proline-specific peptidase, Bacillus coagulans-type subfamily	NA|81aa|down_8|NZ_CP020381.2_939684_939927_+	NA	NA|431aa|down_9|NZ_CP020381.2_940203_941496_+	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily
GCF_002072775.2_ASM207277v2	NZ_CP020381	Mycobacterium tuberculosis strain MTB1, complete genome	7	1196099-1196207	3	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GACAGCCAGCCGGCTGACCCGCCGT	25	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA	NA|544aa|up_9|NZ_CP020381.2_1185466_1187098_+	cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles	NA|355aa|up_8|NZ_CP020381.2_1187173_1188238_+	COG3804, COG3804, Uncharacterized conserved protein related to dihydrodipicolinate reductase [Function unknown]	NA|158aa|up_7|NZ_CP020381.2_1188290_1188764_+	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|up_6|NZ_CP020381.2_1188797_1189661_+	cd01908, YafJ, Glutamine amidotransferases class-II (Gn-AT)_YafJ-type	NA|286aa|up_5|NZ_CP020381.2_1189665_1190523_+	COG1752, RssA, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]	NA|361aa|up_4|NZ_CP020381.2_1190523_1191606_-	cd07228, Pat_NTE_like_bacteria, Bacterial patatin-like phospholipase domain containing protein 6	NA|140aa|up_3|NZ_CP020381.2_1191686_1192106_-	pfam17301, LpqV, Putative lipoprotein LpqV	NA|189aa|up_2|NZ_CP020381.2_1192217_1192784_+	cd10548, cupin_CDO, cysteine dioxygenase, cupin domain	NA|132aa|up_1|NZ_CP020381.2_1192780_1193176_+	cd01447, Polysulfide_ST, Polysulfide-sulfurtransferase - Rhodanese Homology Domain	NA|668aa|up_0|NZ_CP020381.2_1193203_1195207_-	pfam00934, PE, PE family	NA|588aa|down_0|NZ_CP020381.2_1197292_1199056_-	COG4425, COG4425, Predicted membrane protein [Function unknown]	NA|258aa|down_1|NZ_CP020381.2_1199052_1199826_-	PRK05862, PRK05862, enoyl-CoA hydratase; Provisional	NA|346aa|down_2|NZ_CP020381.2_1199837_1200875_-	PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrolase; Provisional	NA|279aa|down_3|NZ_CP020381.2_1201061_1201898_+	COG4760, COG4760, Predicted membrane protein [Function unknown]	NA|284aa|down_4|NZ_CP020381.2_1202013_1202865_+	pfam18741, MTES_1575, REase_MTES_1575	NA|406aa|down_5|NZ_CP020381.2_1202938_1204156_-	PRK07851, PRK07851, acetyl-CoA C-acetyltransferase	NA|315aa|down_6|NZ_CP020381.2_1204208_1205153_-	cd01836, FeeA_FeeB_like, SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases	NA|356aa|down_7|NZ_CP020381.2_1205375_1206443_+	COG0657, Aes, Esterase/lipase [Lipid metabolism]	NA|465aa|down_8|NZ_CP020381.2_1206499_1207894_+	TIGR01137, Cystathionine_beta-synthase, cystathionine beta-synthase	NA|241aa|down_9|NZ_CP020381.2_1208095_1208818_+	pfam06271, RDD, RDD family
GCF_002072775.2_ASM207277v2	NZ_CP020381	Mycobacterium tuberculosis strain MTB1, complete genome	8	1216733-1217589	4	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GGCGGTGTCGGCGGTGCCGGCGG	23	4	73	1217116-1217137|1217161-1217176|1217299-1217320|1217299-1217320|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434|1217416-1217434	NZ_CP020381.2_2961462-2961441|NZ_CP020381.2_2091139-2091124|NZ_CP020381.2_840884-840905|NZ_CP020381.2_1222472-1222493|NZ_CP020381.2_337141-337123|NZ_CP020381.2_677547-677529|NZ_CP020381.2_1218259-1218277|NZ_CP020381.2_1222445-1222463|NZ_CP020381.2_1222517-1222535|NZ_CP020381.2_1635698-1635680|NZ_CP020381.2_2064264-2064246|NZ_CP020381.2_2064669-2064651|NZ_CP020381.2_2803012-2802994|NZ_CP020381.2_2806539-2806521|NZ_CP020381.2_150212-150230|NZ_CP020381.2_333914-333896|NZ_CP020381.2_335141-335123|NZ_CP020381.2_338248-338230|NZ_CP020381.2_338701-338683|NZ_CP020381.2_338752-338734|NZ_CP020381.2_338761-338743|NZ_CP020381.2_341032-341014|NZ_CP020381.2_341428-341410|NZ_CP020381.2_341457-341475|NZ_CP020381.2_341551-341533|NZ_CP020381.2_366078-366060|NZ_CP020381.2_446433-446415|NZ_CP020381.2_550598-550580|NZ_CP020381.2_627871-627889|NZ_CP020381.2_628093-628111|NZ_CP020381.2_676713-676695|NZ_CP020381.2_843667-843685|NZ_CP020381.2_1094391-1094409|NZ_CP020381.2_1095039-1095057|NZ_CP020381.2_1099109-1099091|NZ_CP020381.2_1217788-1217806|NZ_CP020381.2_1218178-1218196|NZ_CP020381.2_1218466-1218484|NZ_CP020381.2_1218484-1218502|NZ_CP020381.2_1222742-1222760|NZ_CP020381.2_1495526-1495508|NZ_CP020381.2_1623662-1623644|NZ_CP020381.2_1624115-1624097|NZ_CP020381.2_1641166-1641148|NZ_CP020381.2_1641175-1641157|NZ_CP020381.2_1869541-1869523|NZ_CP020381.2_1870069-1870051|NZ_CP020381.2_2004176-2004194|NZ_CP020381.2_2091337-2091319|NZ_CP020381.2_2308487-2308469|NZ_CP020381.2_2361940-2361922|NZ_CP020381.2_2423233-2423251|NZ_CP020381.2_2427320-2427302|NZ_CP020381.2_2569923-2569905|NZ_CP020381.2_2695740-2695758|NZ_CP020381.2_2796327-2796309|NZ_CP020381.2_2796909-2796891|NZ_CP020381.2_3067766-3067784|NZ_CP020381.2_3067865-3067883|NZ_CP020381.2_3717889-3717907|NZ_CP020381.2_3757079-3757061|NZ_CP020381.2_3757697-3757679|NZ_CP020381.2_3757940-3757922|NZ_CP020381.2_3758073-3758055|NZ_CP020381.2_3822041-3822059|NZ_CP020381.2_3822224-3822242|NZ_CP020381.2_3822392-3822410|NZ_CP020381.2_3951419-3951437|NZ_CP020381.2_3953157-3953175|NZ_CP020381.2_3962177-3962195|NZ_CP020381.2_3965571-3965589|NZ_CP020381.2_4053001-4052983|NZ_CP020381.2_4115860-4115878	NA	16	16	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|89aa|up_3|NZ_CP020381.2_1212165_1212432_+,NA|61aa|down_3|NZ_CP020381.2_1220052_1220235_+,NA|35aa|down_4|NZ_CP020381.2_1220344_1220449_+	NA|465aa|up_9|NZ_CP020381.2_1206499_1207894_+	TIGR01137, Cystathionine_beta-synthase, cystathionine beta-synthase	NA|241aa|up_8|NZ_CP020381.2_1208095_1208818_+	pfam06271, RDD, RDD family	NA|389aa|up_7|NZ_CP020381.2_1208849_1210016_+	PRK07811, PRK07811, cystathionine gamma-synthase; Provisional	NA|165aa|up_6|NZ_CP020381.2_1210086_1210581_-	PRK00226, greA, transcription elongation factor GreA; Reviewed	NA|145aa|up_5|NZ_CP020381.2_1210766_1211201_-	pfam14155, DUF4307, Domain of unknown function (DUF4307)	NA|289aa|up_4|NZ_CP020381.2_1211302_1212169_+	TIGR03446, mycothiol_Mca, mycothiol conjugate amidase Mca	NA|89aa|up_3|NZ_CP020381.2_1212165_1212432_+	NA	NA|674aa|up_2|NZ_CP020381.2_1212418_1214440_+	COG1331, COG1331, Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]	NA|243aa|up_1|NZ_CP020381.2_1214538_1215267_-	TIGR01065, Hypothetical_UPF0073_protein_yqfA	NA|263aa|up_0|NZ_CP020381.2_1215377_1216166_+	PRK14828, PRK14828, undecaprenyl pyrophosphate synthase; Provisional	NA|107aa|down_0|NZ_CP020381.2_1218867_1219188_+	COG0020, UppS, Undecaprenyl pyrophosphate synthase [Lipid metabolism]	NA|145aa|down_1|NZ_CP020381.2_1219340_1219775_+	pfam00934, PE, PE family	NA|63aa|down_2|NZ_CP020381.2_1219852_1220041_+	smart00637, CBD_II, CBD_II domain	NA|61aa|down_3|NZ_CP020381.2_1220052_1220235_+	NA	NA|35aa|down_4|NZ_CP020381.2_1220344_1220449_+	NA	NA|152aa|down_5|NZ_CP020381.2_1220426_1220882_+	pfam01670, Glyco_hydro_12, Glycosyl hydrolase family 12	NA|813aa|down_6|NZ_CP020381.2_1221296_1223735_+	pfam00934, PE, PE family	NA|313aa|down_7|NZ_CP020381.2_1223952_1224891_-	PRK05439, PRK05439, pantothenate kinase; Provisional	NA|427aa|down_8|NZ_CP020381.2_1225278_1226559_+	PRK00011, glyA, serine hydroxymethyltransferase; Reviewed	NA|276aa|down_9|NZ_CP020381.2_1226663_1227491_+	cd01050, Acyl_ACP_Desat, Acyl ACP desaturase, ferritin-like diiron-binding domain
GCF_002072775.2_ASM207277v2	NZ_CP020381	Mycobacterium tuberculosis strain MTB1, complete genome	9	1577143-1578215	5	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGTTGCCGCCGGCACCGCCGTCGCCGAT	32	0	0	NA	NA	NA	15	15	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|106aa|up_7|NZ_CP020381.2_1568906_1569224_+,NA	NA|103aa|up_9|NZ_CP020381.2_1566421_1566730_+	pfam00934, PE, PE family	NA|540aa|up_8|NZ_CP020381.2_1566726_1568346_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|106aa|up_7|NZ_CP020381.2_1568906_1569224_+	NA	NA|209aa|up_6|NZ_CP020381.2_1569358_1569985_+	PRK00300, gmk, guanylate kinase; Provisional	NA|111aa|up_5|NZ_CP020381.2_1570050_1570383_+	TIGR00690, DNA-directed_RNA_polymerase_subunit_omega, DNA-directed RNA polymerase, omega subunit	NA|419aa|up_4|NZ_CP020381.2_1570398_1571655_+	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|404aa|up_3|NZ_CP020381.2_1571782_1572994_+	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|493aa|up_2|NZ_CP020381.2_1573066_1574545_-	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|462aa|up_1|NZ_CP020381.2_1574541_1575927_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|345aa|up_0|NZ_CP020381.2_1576004_1577039_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|134aa|down_0|NZ_CP020381.2_1579070_1579472_-	cd18741, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily	NA|86aa|down_1|NZ_CP020381.2_1579468_1579726_-	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|320aa|down_2|NZ_CP020381.2_1579808_1580768_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|321aa|down_3|NZ_CP020381.2_1580792_1581755_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|201aa|down_4|NZ_CP020381.2_1581888_1582491_+	COG3714, COG3714, Predicted membrane protein [Function unknown]	NA|656aa|down_5|NZ_CP020381.2_1582571_1584539_+	PRK14873, PRK14873, primosomal protein N'	NA|275aa|down_6|NZ_CP020381.2_1584556_1585381_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|161aa|down_7|NZ_CP020381.2_1585549_1586032_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|275aa|down_8|NZ_CP020381.2_1586103_1586928_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|313aa|down_9|NZ_CP020381.2_1587124_1588063_+	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed
GCF_002072775.2_ASM207277v2	NZ_CP020381	Mycobacterium tuberculosis strain MTB1, complete genome	10	2064414-2064632	3	PILER-CR	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCCGGCGCCGCCGGCCCCACCAACACCGCCCACCCCACC	39	0	0	NA	NA	NA	2	2	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|222aa|up_2|NZ_CP020381.2_2060244_2060910_+,NA	NA|410aa|up_9|NZ_CP020381.2_2052637_2053867_+	pfam00823, PPE, PPE family	NA|469aa|up_8|NZ_CP020381.2_2053998_2055405_+	pfam00823, PPE, PPE family	NA|119aa|up_7|NZ_CP020381.2_2055649_2056006_+	pfam05305, DUF732, Protein of unknown function (DUF732)	NA|235aa|up_6|NZ_CP020381.2_2056159_2056864_+	COG1285, SapB, Uncharacterized membrane protein [Function unknown]	NA|401aa|up_5|NZ_CP020381.2_2056873_2058076_-	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]	NA|144aa|up_4|NZ_CP020381.2_2058397_2058829_-	pfam13827, DUF4189, Domain of unknown function (DUF4189)	NA|301aa|up_3|NZ_CP020381.2_2059237_2060140_+	COG3000, ERG3, Sterol desaturase [Lipid metabolism]	NA|222aa|up_2|NZ_CP020381.2_2060244_2060910_+	NA	NA|235aa|up_1|NZ_CP020381.2_2060972_2061677_+	pfam13305, WHG, WHG domain	NA|488aa|up_0|NZ_CP020381.2_2062311_2063775_+	PRK07121, PRK07121, FAD-binding protein	NA|640aa|down_0|NZ_CP020381.2_2065384_2067304_-	COG4178, COG4178, ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]	NA|548aa|down_1|NZ_CP020381.2_2067374_2069018_+	PRK05858, PRK05858, acetolactate synthase	NA|809aa|down_2|NZ_CP020381.2_2069032_2071459_+	PRK12326, PRK12326, preprotein translocase subunit SecA; Reviewed	NA|210aa|down_3|NZ_CP020381.2_2071655_2072285_+	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism]	NA|308aa|down_4|NZ_CP020381.2_2072277_2073201_+	COG3879, COG3879, Uncharacterized protein conserved in bacteria [Function unknown]	NA|111aa|down_5|NZ_CP020381.2_2073262_2073595_+	COG3856, Sbp, Uncharacterized conserved protein (small basic protein) [Function unknown]	NA|293aa|down_6|NZ_CP020381.2_2073611_2074490_+	COG3879, COG3879, Uncharacterized protein conserved in bacteria [Function unknown]	NA|135aa|down_7|NZ_CP020381.2_2074527_2074932_+	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|163aa|down_8|NZ_CP020381.2_2075171_2075660_+	COG1716, COG1716, FOG: FHA domain [Signal transduction mechanisms]	NA|248aa|down_9|NZ_CP020381.2_2075656_2076400_+	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators
GCF_002072775.2_ASM207277v2	NZ_CP020381	Mycobacterium tuberculosis strain MTB1, complete genome	11	2090809-2091063	3	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCCNCCGTCGCCGCCNNTGCC	21	2	3	2090890-2090907|2090890-2090907|2090980-2090997	NZ_CP020381.2_404103-404086|NZ_CP020381.2_611243-611226|NZ_CP020381.2_3465313-3465296	NA	5	5	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|88aa|up_0|NZ_CP020381.2_2090168_2090432_-,NA	NA|165aa|up_9|NZ_CP020381.2_2076518_2077013_+	pfam02577, DNase-RNase, Bifunctional nuclease	NA|226aa|up_8|NZ_CP020381.2_2077360_2078038_+	cd01105, HTH_GlnR-like, Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators	NA|942aa|up_7|NZ_CP020381.2_2078396_2081222_+	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase	NA|287aa|up_6|NZ_CP020381.2_2081448_2082309_-	PRK03204, PRK03204, haloalkane dehalogenase; Provisional	NA|289aa|up_5|NZ_CP020381.2_2082349_2083216_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|629aa|up_4|NZ_CP020381.2_2083220_2085107_-	TIGR00976, Hypothetical_protein_Rv1835c/MT1883/Mb1866c	NA|678aa|up_3|NZ_CP020381.2_2085122_2087156_-	cd01456, vWA_ywmD_type, VWA ywmD type:Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF)	NA|742aa|up_2|NZ_CP020381.2_2087275_2089501_-	PRK02999, PRK02999, malate synthase G; Provisional	NA|132aa|up_1|NZ_CP020381.2_2089776_2090172_-	COG1848, COG1848, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	NA|88aa|up_0|NZ_CP020381.2_2090168_2090432_-	NA	NA|346aa|down_0|NZ_CP020381.2_2092200_2093238_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|456aa|down_1|NZ_CP020381.2_2093237_2094605_-	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|479aa|down_2|NZ_CP020381.2_2094778_2096215_-	PRK07807, PRK07807, GuaB1 family IMP dehydrogenase-related protein	NA|484aa|down_3|NZ_CP020381.2_2096250_2097702_-	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase	NA|317aa|down_4|NZ_CP020381.2_2097731_2098682_-	cd07326, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase	NA|139aa|down_5|NZ_CP020381.2_2098696_2099113_-	COG3682, COG3682, Predicted transcriptional regulator [Transcription]	NA|141aa|down_6|NZ_CP020381.2_2099390_2099813_+	COG2050, PaaI, HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis,    transport, and catabolism]	NA|101aa|down_7|NZ_CP020381.2_2099861_2100164_+	pfam00547, Urease_gamma, Urease, gamma subunit	NA|105aa|down_8|NZ_CP020381.2_2100160_2100475_+	PRK13202, ureB, urease subunit beta; Reviewed	NA|578aa|down_9|NZ_CP020381.2_2100474_2102208_+	PRK13206, ureC, urease subunit alpha; Reviewed
GCF_002072775.2_ASM207277v2	NZ_CP020381	Mycobacterium tuberculosis strain MTB1, complete genome	12	2171340-2171559	6	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GTGCCAGCCGGAATCGTGATCGGCGGAACCGTCACCGACGGAATACTCA	49	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|136aa|up_3|NZ_CP020381.2_2162446_2162854_-,NA|127aa|down_5|NZ_CP020381.2_2179075_2179456_-	NA|741aa|up_9|NZ_CP020381.2_2156414_2158637_-	PRK15061, PRK15061, catalase/peroxidase	NA|148aa|up_8|NZ_CP020381.2_2158674_2159118_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|198aa|up_7|NZ_CP020381.2_2159231_2159825_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|202aa|up_6|NZ_CP020381.2_2159907_2160513_-	COG1881, COG1881, Phospholipid-binding protein [General function prediction only]	NA|335aa|up_5|NZ_CP020381.2_2160612_2161617_-	cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family	NA|251aa|up_4|NZ_CP020381.2_2161716_2162469_+	cd16282, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|136aa|up_3|NZ_CP020381.2_2162446_2162854_-	NA	NA|368aa|up_2|NZ_CP020381.2_2162988_2164092_+	COG2224, AceA, Isocitrate lyase [Energy production and conversion]	NA|399aa|up_1|NZ_CP020381.2_2164091_2165288_+	COG2224, AceA, Isocitrate lyase [Energy production and conversion]	NA|1460aa|up_0|NZ_CP020381.2_2165457_2169837_-	pfam00823, PPE, PPE family	NA|155aa|down_0|NZ_CP020381.2_2173586_2174051_-	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|288aa|down_1|NZ_CP020381.2_2174148_2175012_+	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	NA|424aa|down_2|NZ_CP020381.2_2175049_2176321_-	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|372aa|down_3|NZ_CP020381.2_2176592_2177708_+	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms]	NA|447aa|down_4|NZ_CP020381.2_2177698_2179039_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|127aa|down_5|NZ_CP020381.2_2179075_2179456_-	NA	NA|621aa|down_6|NZ_CP020381.2_2179612_2181475_+	PRK12476, PRK12476, putative fatty-acid--CoA ligase; Provisional	NA|160aa|down_7|NZ_CP020381.2_2181482_2181962_-	pfam09167, DUF1942, Domain of unknown function (DUF1942)	NA|258aa|down_8|NZ_CP020381.2_2182198_2182972_+	COG3361, COG3361, Uncharacterized conserved protein [Function unknown]	NA|256aa|down_9|NZ_CP020381.2_2182975_2183743_-	PRK05867, PRK05867, SDR family oxidoreductase
GCF_002072775.2_ASM207277v2	NZ_CP020381	Mycobacterium tuberculosis strain MTB1, complete genome	13	3132357-3133711	4,7,4	PILER-CR,CRISPRCasFinder,CRT	no	c2c9_V-U4,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type III-A,Type III-D,Type III-B,Type III-C	GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	36,36,36	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A	16,17,18	18	TypeIII-A,TypeIII-D,TypeIII-B,TypeIII-C	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|85aa|up_8|NZ_CP020381.2_3125636_3125891_-,NA|135aa|up_7|NZ_CP020381.2_3126038_3126443_+,NA|64aa|up_6|NZ_CP020381.2_3126439_3126631_+,NA|86aa|up_4|NZ_CP020381.2_3128217_3128475_+,NA|104aa|up_3|NZ_CP020381.2_3128579_3128891_+,NA|203aa|up_2|NZ_CP020381.2_3129310_3129919_+,NA	NA|92aa|up_9|NZ_CP020381.2_3125185_3125461_+	COG4453, COG4453, Uncharacterized protein conserved in bacteria [Function unknown]	NA|85aa|up_8|NZ_CP020381.2_3125636_3125891_-	NA	NA|135aa|up_7|NZ_CP020381.2_3126038_3126443_+	NA	NA|64aa|up_6|NZ_CP020381.2_3126439_3126631_+	NA	NA|385aa|up_5|NZ_CP020381.2_3126829_3127984_+	pfam00665, rve, Integrase core domain	NA|86aa|up_4|NZ_CP020381.2_3128217_3128475_+	NA	NA|104aa|up_3|NZ_CP020381.2_3128579_3128891_+	NA	NA|203aa|up_2|NZ_CP020381.2_3129310_3129919_+	NA	NA|470aa|up_1|NZ_CP020381.2_3129989_3131399_+	pfam00665, rve, Integrase core domain	NA|271aa|up_0|NZ_CP020381.2_3131395_3132208_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|421aa|down_0|NZ_CP020381.2_3133737_3134999_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas2|114aa|down_1|NZ_CP020381.2_3136805_3137147_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|339aa|down_2|NZ_CP020381.2_3137147_3138164_-	TIGR00287, CRISPR-associated_endonuclease_Cas1, CRISPR-associated endonuclease Cas1	csm6|383aa|down_3|NZ_CP020381.2_3138176_3139325_-	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csm5gr7|376aa|down_4|NZ_CP020381.2_3139420_3140548_-	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csm4gr5|303aa|down_5|NZ_CP020381.2_3140544_3141453_-	COG1567, COG1567, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm3gr7|237aa|down_6|NZ_CP020381.2_3141433_3142144_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|125aa|down_7|NZ_CP020381.2_3142153_3142528_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	cas10|813aa|down_8|NZ_CP020381.2_3142524_3144963_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|241aa|down_9|NZ_CP020381.2_3144959_3145682_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]
GCF_002072775.2_ASM207277v2	NZ_CP020381	Mycobacterium tuberculosis strain MTB1, complete genome	14	3135034-3136757	8,5,5	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Type III-A,Type III-D,Type III-B,Type III-C	GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC,GTTTCCGTCCCCTCTCGGGGTTTTGGGTCTGACGAC	36,36,36	0	0	NA	NA	II-B,III-A:II-B,III-A:II-B,III-A	23,23,22	23	TypeIII-A,TypeIII-D,TypeIII-B,TypeIII-C	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|85aa|up_9|NZ_CP020381.2_3125636_3125891_-,NA|135aa|up_8|NZ_CP020381.2_3126038_3126443_+,NA|64aa|up_7|NZ_CP020381.2_3126439_3126631_+,NA|86aa|up_5|NZ_CP020381.2_3128217_3128475_+,NA|104aa|up_4|NZ_CP020381.2_3128579_3128891_+,NA|203aa|up_3|NZ_CP020381.2_3129310_3129919_+,NA	NA|85aa|up_9|NZ_CP020381.2_3125636_3125891_-	NA	NA|135aa|up_8|NZ_CP020381.2_3126038_3126443_+	NA	NA|64aa|up_7|NZ_CP020381.2_3126439_3126631_+	NA	NA|385aa|up_6|NZ_CP020381.2_3126829_3127984_+	pfam00665, rve, Integrase core domain	NA|86aa|up_5|NZ_CP020381.2_3128217_3128475_+	NA	NA|104aa|up_4|NZ_CP020381.2_3128579_3128891_+	NA	NA|203aa|up_3|NZ_CP020381.2_3129310_3129919_+	NA	NA|470aa|up_2|NZ_CP020381.2_3129989_3131399_+	pfam00665, rve, Integrase core domain	NA|271aa|up_1|NZ_CP020381.2_3131395_3132208_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|421aa|up_0|NZ_CP020381.2_3133737_3134999_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas2|114aa|down_0|NZ_CP020381.2_3136805_3137147_-	COG1343, COG1343, CRISPR-associated protein Cas2 [Defense mechanisms]	cas1|339aa|down_1|NZ_CP020381.2_3137147_3138164_-	TIGR00287, CRISPR-associated_endonuclease_Cas1, CRISPR-associated endonuclease Cas1	csm6|383aa|down_2|NZ_CP020381.2_3138176_3139325_-	cd09699, Csm6_III-A, CRISPR/Cas system-associated protein Csm6	csm5gr7|376aa|down_3|NZ_CP020381.2_3139420_3140548_-	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csm4gr5|303aa|down_4|NZ_CP020381.2_3140544_3141453_-	COG1567, COG1567, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm3gr7|237aa|down_5|NZ_CP020381.2_3141433_3142144_-	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm2gr11|125aa|down_6|NZ_CP020381.2_3142153_3142528_-	TIGR01870, CRISPR_type_III-associated_protein_Csm2, CRISPR type III-A/MTUBE-associated protein Csm2	cas10|813aa|down_7|NZ_CP020381.2_3142524_3144963_-	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	cas6|241aa|down_8|NZ_CP020381.2_3144959_3145682_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|182aa|down_9|NZ_CP020381.2_3146081_3146627_-	COG4293, COG4293, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_002072775.2_ASM207277v2	NZ_CP020381	Mycobacterium tuberculosis strain MTB1, complete genome	15	3760285-3760964	6	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCGCCGNNNCCNCCGTNGCCGCC	23	0	0	NA	NA	NA	9	9	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|96aa|down_4|NZ_CP020381.2_3776363_3776651_-,NA|87aa|down_9|NZ_CP020381.2_3789771_3790032_-	NA|282aa|up_9|NZ_CP020381.2_3737754_3738600_-	pfam05305, DUF732, Protein of unknown function (DUF732)	NA|147aa|up_8|NZ_CP020381.2_3739074_3739515_+	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators	NA|290aa|up_7|NZ_CP020381.2_3739548_3740418_-	TIGR00766, Uncharacterized_protein_Dda3937_02003, inner membrane protein YhjD	NA|337aa|up_6|NZ_CP020381.2_3740438_3741449_-	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|211aa|up_5|NZ_CP020381.2_3741733_3742366_+	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional	NA|410aa|up_4|NZ_CP020381.2_3742432_3743662_-	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase	NA|450aa|up_3|NZ_CP020381.2_3743944_3745294_+	PRK07812, PRK07812, O-acetylhomoserine aminocarboxypropyltransferase; Validated	NA|380aa|up_2|NZ_CP020381.2_3745305_3746445_+	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|244aa|up_1|NZ_CP020381.2_3746441_3747173_+	pfam08241, Methyltransf_11, Methyltransferase domain	NA|3114aa|up_0|NZ_CP020381.2_3747181_3756523_-	pfam00823, PPE, PPE family	NA|86aa|down_0|NZ_CP020381.2_3762875_3763133_-	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|421aa|down_1|NZ_CP020381.2_3770272_3771534_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|149aa|down_2|NZ_CP020381.2_3774845_3775292_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|273aa|down_3|NZ_CP020381.2_3775328_3776147_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|96aa|down_4|NZ_CP020381.2_3776363_3776651_-	NA	NA|3717aa|down_5|NZ_CP020381.2_3776987_3788138_-	pfam00823, PPE, PPE family	NA|265aa|down_6|NZ_CP020381.2_3788381_3789176_-	pfam08031, BBE, Berberine and berberine like	NA|124aa|down_7|NZ_CP020381.2_3789257_3789629_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|137aa|down_8|NZ_CP020381.2_3789526_3789937_-	pfam01565, FAD_binding_4, FAD binding domain	NA|87aa|down_9|NZ_CP020381.2_3789771_3790032_-	NA
GCF_002072775.2_ASM207277v2	NZ_CP020381	Mycobacterium tuberculosis strain MTB1, complete genome	16	3867797-3867886	9	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CCAGGCGTTGGGCTGGCTGCCGAT	24	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|77aa|up_7|NZ_CP020381.2_3861191_3861422_+,NA|121aa|up_6|NZ_CP020381.2_3861525_3861888_-,NA|73aa|up_2|NZ_CP020381.2_3865862_3866081_-,NA|121aa|down_0|NZ_CP020381.2_3868871_3869234_-,NA|52aa|down_2|NZ_CP020381.2_3871075_3871231_-,NA|52aa|down_3|NZ_CP020381.2_3871255_3871411_-,NA|238aa|down_6|NZ_CP020381.2_3875446_3876160_-	NA|169aa|up_9|NZ_CP020381.2_3859502_3860009_-	COG0802, COG0802, Predicted ATPase or kinase [General function prediction only]	NA|409aa|up_8|NZ_CP020381.2_3860005_3861232_-	PRK00053, alr, alanine racemase; Reviewed	NA|77aa|up_7|NZ_CP020381.2_3861191_3861422_+	NA	NA|121aa|up_6|NZ_CP020381.2_3861525_3861888_-	NA	NA|177aa|up_5|NZ_CP020381.2_3862050_3862581_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|177aa|up_4|NZ_CP020381.2_3862847_3863378_+	pfam00823, PPE, PPE family	NA|725aa|up_3|NZ_CP020381.2_3863695_3865870_-	COG1484, DnaC, DNA replication protein [DNA replication, recombination, and repair]	NA|73aa|up_2|NZ_CP020381.2_3865862_3866081_-	NA	NA|100aa|up_1|NZ_CP020381.2_3866575_3866875_+	pfam00934, PE, PE family	NA|181aa|up_0|NZ_CP020381.2_3866960_3867503_+	COG5651, COG5651, PPE-repeat proteins [Cell motility and secretion]	NA|121aa|down_0|NZ_CP020381.2_3868871_3869234_-	NA	NA|179aa|down_1|NZ_CP020381.2_3869396_3869933_+	pfam00823, PPE, PPE family	NA|52aa|down_2|NZ_CP020381.2_3871075_3871231_-	NA	NA|52aa|down_3|NZ_CP020381.2_3871255_3871411_-	NA	NA|461aa|down_4|NZ_CP020381.2_3872603_3873986_-	TIGR01788, Glutamate_decarboxylase_alpha_GAD-alpha	NA|474aa|down_5|NZ_CP020381.2_3874023_3875445_-	pfam01256, Carb_kinase, Carbohydrate kinase	NA|238aa|down_6|NZ_CP020381.2_3875446_3876160_-	NA	NA|285aa|down_7|NZ_CP020381.2_3876170_3877025_-	pfam14494, DUF4436, Domain of unknown function (DUF4436)	NA|625aa|down_8|NZ_CP020381.2_3877246_3879121_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|159aa|down_9|NZ_CP020381.2_3879142_3879619_+	pfam10708, DUF2510, Protein of unknown function (DUF2510)
GCF_002072775.2_ASM207277v2	NZ_CP020381	Mycobacterium tuberculosis strain MTB1, complete genome	17	3969892-3971384	7	CRT	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	CNNCGGCGGCNNCGGCGGCNCCGGCGGNNNCGGCGGCA	38	2	9	3970062-3970134|3971115-3971139|3971115-3971139|3971115-3971139|3971115-3971139|3971115-3971139|3971115-3971139|3971115-3971139|3971115-3971139	NZ_CP020381.2_3969711-3969783|NZ_CP020381.2_675109-675085|NZ_CP020381.2_3757365-3757341|NZ_CP020381.2_3962680-3962704|NZ_CP020381.2_3963025-3963049|NZ_CP020381.2_3963697-3963721|NZ_CP020381.2_3964033-3964057|NZ_CP020381.2_3964388-3964412|NZ_CP020381.2_4052891-4052867	NA	17	17	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA,NA|280aa|down_2|NZ_CP020381.2_3974697_3975537_+	NA|255aa|up_9|NZ_CP020381.2_3940969_3941734_-	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|318aa|up_8|NZ_CP020381.2_3941959_3942913_-	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|64aa|up_7|NZ_CP020381.2_3942937_3943129_-	COG1141, Fer, Ferredoxin [Energy production and conversion]	NA|401aa|up_6|NZ_CP020381.2_3943343_3944546_+	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|374aa|up_5|NZ_CP020381.2_3944570_3945692_+	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism]	NA|503aa|up_4|NZ_CP020381.2_3945762_3947271_+	PRK07867, PRK07867, acyl-CoA synthetase; Validated	NA|1391aa|up_3|NZ_CP020381.2_3947441_3951614_+	pfam00934, PE, PE family	NA|516aa|up_2|NZ_CP020381.2_3958297_3959845_-	PRK07586, PRK07586, acetolactate synthase large subunit	NA|279aa|up_1|NZ_CP020381.2_3959841_3960678_-	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]	NA|219aa|up_0|NZ_CP020381.2_3967538_3968195_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|549aa|down_0|NZ_CP020381.2_3972090_3973737_-	PRK07798, PRK07798, acyl-CoA synthetase; Validated	NA|264aa|down_1|NZ_CP020381.2_3973810_3974602_+	PRK07799, PRK07799, crotonase/enoyl-CoA hydratase family protein	NA|280aa|down_2|NZ_CP020381.2_3974697_3975537_+	NA	NA|399aa|down_3|NZ_CP020381.2_3975591_3976788_-	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]	NA|237aa|down_4|NZ_CP020381.2_3976816_3977527_+	pfam06314, ADC, Acetoacetate decarboxylase (ADC)	NA|348aa|down_5|NZ_CP020381.2_3977591_3978635_-	TIGR03559, F420_Rv3520c, probable F420-dependent oxidoreductase, Rv3520c family	NA|304aa|down_6|NZ_CP020381.2_3978787_3979699_+	COG1545, COG1545, Predicted nucleic-acid-binding protein containing a Zn-ribbon [General function prediction only]	NA|355aa|down_7|NZ_CP020381.2_3979714_3980779_+	PRK07937, PRK07937, lipid-transfer protein; Provisional	NA|395aa|down_8|NZ_CP020381.2_3980795_3981980_+	PRK08313, PRK08313, thiolase domain-containing protein	NA|344aa|down_9|NZ_CP020381.2_3982021_3983053_+	cd14952, NHL_PKND_like, NHL repeat domain of the protein kinase PknD
GCF_002072775.2_ASM207277v2	NZ_CP020381	Mycobacterium tuberculosis strain MTB1, complete genome	18	4132277-4132365	10	CRISPRCasFinder	no		RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	Orphan	GCTCGGCGACGATGCGGGCCGGATGACGGCC	31	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,c2c9_V-U4,cas3,DinG,WYL,cas4,DEDDh,cas2,cas1,csm6,csm5gr7,csm4gr5,csm3gr7,csm2gr11,cas10,cas6	NA|257aa|up_8|NZ_CP020381.2_4122863_4123634_-,NA|119aa|up_3|NZ_CP020381.2_4128768_4129125_+,NA|52aa|up_2|NZ_CP020381.2_4129224_4129380_+,NA|233aa|up_0|NZ_CP020381.2_4131381_4132080_-,NA|126aa|down_6|NZ_CP020381.2_4137600_4137978_+	NA|288aa|up_9|NZ_CP020381.2_4121245_4122109_+	TIGR01490, Uncharacterized_protein_Rv3661/MT3761, HAD-superfamily subfamily IB hydrolase, TIGR01490	NA|257aa|up_8|NZ_CP020381.2_4122863_4123634_-	NA	NA|549aa|up_7|NZ_CP020381.2_4123630_4125277_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|288aa|up_6|NZ_CP020381.2_4125273_4126137_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|309aa|up_5|NZ_CP020381.2_4126129_4127056_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|542aa|up_4|NZ_CP020381.2_4127057_4128683_-	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|119aa|up_3|NZ_CP020381.2_4128768_4129125_+	NA	NA|52aa|up_2|NZ_CP020381.2_4129224_4129380_+	NA	NA|652aa|up_1|NZ_CP020381.2_4129390_4131346_+	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|233aa|up_0|NZ_CP020381.2_4131381_4132080_-	NA	NA|173aa|down_0|NZ_CP020381.2_4132425_4132944_+	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III	NA|328aa|down_1|NZ_CP020381.2_4132944_4133928_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|398aa|down_2|NZ_CP020381.2_4133920_4135114_-	pfam13365, Trypsin_2, Trypsin-like peptidase domain	NA|274aa|down_3|NZ_CP020381.2_4135119_4135941_-	cd03426, CoAse, Coenzyme A pyrophosphatase (CoAse), a member of the Nudix hydrolase superfamily, functions to catalyze the elimination of oxidized inactive CoA, which can inhibit CoA-utilizing enzymes	NA|228aa|down_4|NZ_CP020381.2_4136072_4136756_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|246aa|down_5|NZ_CP020381.2_4136755_4137493_-	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]	NA|126aa|down_6|NZ_CP020381.2_4137600_4137978_+	NA	NA|225aa|down_7|NZ_CP020381.2_4138076_4138751_+	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|265aa|down_8|NZ_CP020381.2_4138856_4139651_-	cd16278, metallo-hydrolase-like_MBL-fold, uncharacterized subgroup of the MBL-fold_metallo-hydrolase superfamily; MBL-fold metallo hydrolase domain	NA|152aa|down_9|NZ_CP020381.2_4139657_4140113_-	cd02199, YjgF_YER057c_UK114_like_1, This group of proteins belong to a large family of YjgF/YER057c/UK114-like proteins present in bacteria, archaea, and eukaryotes with no definitive function
