The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP018845	Herbaspirillum robiniae strain AA6 chromosome, complete genome	5445269	369781	376930	5445269		uncultured_Mediterranean_phage(33.33%)	7	NA	NA
WP_079219033.1|369781_370519_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	55.8	2.4e-73
WP_079214491.1|370515_371499_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	47.9	6.4e-34
WP_079214492.1|371740_372724_+	peptidoglycan DD-metalloendopeptidase family protein	NA	NA	NA	NA	NA
WP_079214493.1|372955_373972_+	RNA polymerase sigma factor RpoS	NA	F4YCU2	Synechococcus_phage	34.3	7.8e-35
WP_079214494.1|374150_375512_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.1	1.4e-26
WP_079214495.1|375576_376269_-	Bax inhibitor-1/YccA family protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	35.9	3.5e-26
WP_079214496.1|376504_376930_+	nucleoside-diphosphate kinase	NA	A0A167REB2	Powai_lake_megavirus	42.1	2.7e-21
>prophage 2
NZ_CP018845	Herbaspirillum robiniae strain AA6 chromosome, complete genome	5445269	2128681	2136397	5445269	protease	Methanothermobacter_phage(16.67%)	7	NA	NA
WP_079215844.1|2128681_2129878_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	NA	Q9HH70	Methanothermobacter_phage	32.6	1.7e-41
WP_079215845.1|2129931_2130381_+	dUTP diphosphatase	NA	Q2NP83	Xanthomonas_phage	62.2	4.7e-48
WP_079215846.1|2130392_2131484_+|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_079215847.1|2131800_2134104_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.7	4.7e-168
WP_079215848.1|2134100_2134415_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	42.2	9.9e-13
WP_079215849.1|2134755_2134959_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	80.3	3.0e-23
WP_079215850.1|2135140_2136397_-	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	61.1	5.2e-12
>prophage 3
NZ_CP018845	Herbaspirillum robiniae strain AA6 chromosome, complete genome	5445269	4177928	4183991	5445269	tRNA	Enterobacteria_phage(33.33%)	6	NA	NA
WP_079217863.1|4177928_4178474_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	51.7	2.4e-46
WP_079217864.1|4178487_4179390_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	K7QKA7	Escherichia_phage	62.4	5.2e-99
WP_079217865.1|4179386_4180466_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	49.7	7.7e-89
WP_079217866.1|4180479_4181490_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	43.4	5.0e-82
WP_175354831.1|4181524_4182601_-	CDP-glucose 4,6-dehydratase	NA	A0A222YY99	Synechococcus_phage	25.7	5.1e-16
WP_079217868.1|4183019_4183991_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	67.3	2.7e-101
>prophage 4
NZ_CP018845	Herbaspirillum robiniae strain AA6 chromosome, complete genome	5445269	4480528	4512252	5445269	head,integrase,portal,plate,tail,terminase,lysis,capsid,protease	Burkholderia_phage(27.59%)	43	4481155:4481171	4514101:4514117
WP_079218117.1|4480528_4481020_+|protease	ClpXP protease specificity-enhancing factor	protease	A0A1S5R3H3	Pseudomonas_phage	48.3	1.5e-20
4481155:4481171	attL	TTTTTTGCTTCGCAATT	NA	NA	NA	NA
WP_079218118.1|4481937_4483023_-|integrase	tyrosine-type recombinase/integrase	integrase	C8CLF4	Xylella_phage	51.4	4.8e-91
WP_079218119.1|4483024_4483267_-	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_079219314.1|4483448_4483796_-	hypothetical protein	NA	NA	NA	NA	NA
WP_175354689.1|4483876_4484023_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079218120.1|4484019_4486077_-	replication endonuclease	NA	A4JWW0	Burkholderia_virus	40.7	1.7e-105
WP_079218121.1|4486066_4486420_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079218122.1|4486593_4486854_-	ogr/Delta-like zinc finger family protein	NA	E5E3T8	Burkholderia_phage	37.0	5.5e-09
WP_079218123.1|4486844_4487045_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079218124.1|4487037_4487280_-	hypothetical protein	NA	NA	NA	NA	NA
WP_148664552.1|4487293_4487494_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079218125.1|4487571_4488009_+	helix-turn-helix transcriptional regulator	NA	Q6QID2	Burkholderia_phage	35.2	5.6e-14
WP_148664553.1|4488129_4488804_+	hypothetical protein	NA	A4PE55	Ralstonia_virus	30.9	4.6e-15
WP_148664554.1|4488859_4490740_+	hypothetical protein	NA	NA	NA	NA	NA
WP_079218128.1|4490755_4491979_-	late control protein	NA	A0A2H4JAV0	uncultured_Caudovirales_phage	43.4	3.9e-81
WP_079218129.1|4491975_4492527_-|tail	phage tail protein	tail	Q9ZXJ9	Pseudomonas_virus	55.3	5.6e-35
WP_079218130.1|4492539_4495164_-|tail	phage tail protein	tail	A4PE52	Ralstonia_virus	54.7	1.5e-218
WP_079218131.1|4495164_4495278_-|tail	GpE family phage tail protein	tail	A0A1S5NR79	Burkholderia_phage	63.6	3.5e-05
WP_192858506.1|4495286_4495610_-|tail	phage tail assembly protein	tail	A4PE51	Ralstonia_virus	56.4	5.0e-20
WP_079218132.1|4495670_4496180_-|tail	phage major tail tube protein	tail	R4JEU1	Burkholderia_phage	53.8	4.5e-47
WP_079218133.1|4496243_4497419_-|tail	phage tail sheath protein	tail	E5FFG9	Burkholderia_phage	66.1	8.0e-148
WP_122984498.1|4497443_4497962_-|tail	tail fiber assembly protein	tail	NA	NA	NA	NA
WP_079218135.1|4497970_4499161_-|tail	phage tail protein	tail	A0A2I8TVA9	Erwinia_phage	39.4	1.7e-49
WP_079218136.1|4499157_4499778_-|tail	phage tail protein I	tail	A0A2H4JAU2	uncultured_Caudovirales_phage	58.5	4.2e-55
WP_079218137.1|4499770_4500694_-|plate	baseplate J/gp47 family protein	plate	A0A1S6KZY6	Salmonella_phage	51.5	2.1e-71
WP_079218138.1|4500690_4501035_-	GPW/gp25 family protein	NA	K4I3Z7	Acidithiobacillus_phage	51.6	4.5e-19
WP_079219316.1|4501031_4501676_-|plate	phage baseplate assembly protein V	plate	F1BUP5	Erwinia_phage	42.1	4.4e-23
WP_158522620.1|4501874_4502024_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158522622.1|4502054_4502216_+	hypothetical protein	NA	NA	NA	NA	NA
WP_079218139.1|4502390_4502876_-	phage virion morphogenesis protein	NA	A0A2H4J927	uncultured_Caudovirales_phage	52.0	8.9e-37
WP_079218140.1|4502872_4503358_-|tail	phage tail protein	tail	A0A2H4J906	uncultured_Caudovirales_phage	47.2	1.9e-31
WP_079218141.1|4503311_4503812_-|lysis	lysis protein	lysis	NA	NA	NA	NA
WP_079218142.1|4503877_4504408_-	glycoside hydrolase family 104 protein	NA	C6ZR65	Salmonella_phage	59.5	8.5e-41
WP_079218143.1|4504404_4504779_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079218144.1|4504817_4505027_-|tail	tail protein X	tail	E5FFI3	Burkholderia_phage	48.4	9.2e-07
WP_079218145.1|4505026_4505518_-|head	head completion/stabilization protein	head	K4NZV5	Burkholderia_phage	54.8	1.3e-32
WP_079218146.1|4505607_4506327_-|integrase	integrase	integrase	A0A2H4J948	uncultured_Caudovirales_phage	46.0	2.1e-42
WP_079218147.1|4506329_4507373_-|capsid	phage major capsid protein, P2 family	capsid	A4PE30	Ralstonia_virus	63.7	1.8e-114
WP_079218148.1|4507428_4508265_-|capsid	GPO family capsid scaffolding protein	capsid	A0A2H4J928	uncultured_Caudovirales_phage	48.3	6.6e-56
WP_079218149.1|4508408_4510187_+|terminase	terminase	terminase	A4JWQ1	Burkholderia_virus	64.1	1.5e-219
WP_079218150.1|4510186_4511236_+|portal	phage portal protein	portal	K4NZV0	Burkholderia_phage	60.6	3.9e-122
WP_079218151.1|4511238_4511451_+	hypothetical protein	NA	NA	NA	NA	NA
WP_079218152.1|4511808_4512252_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	44.3	8.2e-21
4514101:4514117	attR	AATTGCGAAGCAAAAAA	NA	NA	NA	NA
>prophage 5
NZ_CP018845	Herbaspirillum robiniae strain AA6 chromosome, complete genome	5445269	5328689	5360951	5445269	capsid,plate,terminase	Burkholderia_phage(43.75%)	47	NA	NA
WP_079218911.1|5328689_5329361_+	recombination protein NinG	NA	H2BDI7	Pseudomonas_virus	39.7	2.8e-28
WP_079218912.1|5329361_5330162_+	hypothetical protein	NA	A0A125RNK1	Pseudomonas_phage	59.2	4.7e-35
WP_079218913.1|5330154_5330802_+	hypothetical protein	NA	Q3HQZ7	Burkholderia_phage	46.8	4.5e-52
WP_079218914.1|5330991_5331318_+	hypothetical protein	NA	NA	NA	NA	NA
WP_079218915.1|5331349_5332054_+	metallophosphoesterase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	50.7	1.2e-58
WP_079218916.1|5332077_5332269_+	hypothetical protein	NA	NA	NA	NA	NA
WP_148664581.1|5332265_5332499_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158522643.1|5332507_5332681_+	hypothetical protein	NA	NA	NA	NA	NA
WP_079218917.1|5332682_5333237_+	hypothetical protein	NA	NA	NA	NA	NA
WP_079218918.1|5333344_5333539_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079218919.1|5333760_5334474_+|terminase	terminase small subunit	terminase	A0A248SKT2	Klebsiella_phage	47.8	8.7e-49
WP_079218920.1|5334424_5335972_+|terminase	phage terminase large subunit	terminase	H9C0C7	Vibrio_phage	45.5	9.3e-112
WP_079218921.1|5335968_5337519_+	DUF1073 domain-containing protein	NA	A0A0P0I486	Acinetobacter_phage	63.1	1.5e-157
WP_079218922.1|5337484_5338126_+|capsid	minor capsid protein	capsid	A9YWZ8	Burkholderia_phage	60.0	1.7e-67
WP_079219372.1|5338203_5339517_+	DUF2213 domain-containing protein	NA	A0A0P0IRE1	Acinetobacter_phage	45.9	1.6e-64
WP_079218923.1|5339529_5340021_+	hypothetical protein	NA	A0A0P0I8F3	Acinetobacter_phage	54.0	1.0e-35
WP_079218924.1|5340036_5341074_+	DUF2184 domain-containing protein	NA	A0A0N7IRF2	Acinetobacter_phage	67.9	1.3e-125
WP_079218925.1|5341085_5341496_+	hypothetical protein	NA	NA	NA	NA	NA
WP_079218926.1|5341505_5341889_+	DUF4054 domain-containing protein	NA	A9YX25	Burkholderia_phage	64.6	3.3e-42
WP_079218927.1|5341913_5342411_+	hypothetical protein	NA	A9YX26	Burkholderia_phage	54.9	9.1e-37
WP_079218928.1|5342413_5342785_+	hypothetical protein	NA	A9YX28	Burkholderia_phage	69.1	7.5e-44
WP_079218929.1|5342788_5343379_+	hypothetical protein	NA	A9YX29	Burkholderia_phage	61.2	4.0e-63
WP_079218930.1|5343391_5344864_+	DUF3383 domain-containing protein	NA	A0A0P0I492	Acinetobacter_phage	45.0	6.8e-104
WP_079218931.1|5344879_5345320_+	DUF3277 family protein	NA	A0A0P0IKY2	Acinetobacter_phage	56.2	1.1e-38
WP_079218932.1|5345322_5345769_+	hypothetical protein	NA	A0A0N7IRF3	Acinetobacter_phage	36.7	2.5e-17
WP_079219373.1|5345765_5345954_+	hypothetical protein	NA	NA	NA	NA	NA
WP_079218933.1|5345946_5347647_+	hypothetical protein	NA	A0A2H4J9N7	uncultured_Caudovirales_phage	34.8	2.6e-38
WP_079218934.1|5347643_5348219_+	hypothetical protein	NA	A0A0M3ULD5	Salmonella_phage	36.5	2.0e-19
WP_079218935.1|5348218_5348533_+	hypothetical protein	NA	NA	NA	NA	NA
WP_079218936.1|5348532_5349501_+	hypothetical protein	NA	A9YX04	Burkholderia_phage	77.2	9.2e-126
WP_079218937.1|5349500_5350247_+	hypothetical protein	NA	A9YX06	Burkholderia_phage	72.6	3.3e-99
WP_079218938.1|5350256_5350610_+	hypothetical protein	NA	A9YX11	Burkholderia_phage	62.4	6.3e-32
WP_079218939.1|5350606_5351785_+|plate	baseplate J/gp47 family protein	plate	A9YX12	Burkholderia_phage	64.2	4.4e-130
WP_079218940.1|5351786_5352449_+	DUF2612 domain-containing protein	NA	A9YX13	Burkholderia_phage	73.9	7.8e-92
WP_079218941.1|5352458_5353475_+	hypothetical protein	NA	A9YX14	Burkholderia_phage	65.6	1.4e-23
WP_148664582.1|5353471_5353705_+	hypothetical protein	NA	NA	NA	NA	NA
WP_148664583.1|5353701_5354745_+	hypothetical protein	NA	I6R1H9	Marinomonas_phage	31.6	5.2e-26
WP_148664584.1|5354745_5355120_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079218943.1|5355222_5355567_+	hypothetical protein	NA	NA	NA	NA	NA
WP_148664585.1|5355563_5355824_+	hypothetical protein	NA	NA	NA	NA	NA
WP_079218945.1|5355810_5356305_+	hypothetical protein	NA	I6NSS1	Burkholderia_phage	52.5	3.0e-40
WP_079218946.1|5356301_5356574_+	hypothetical protein	NA	NA	NA	NA	NA
WP_158522645.1|5356854_5358903_-	acyltransferase family protein	NA	A0A1R3Y5Q6	Salmonella_virus	39.4	2.9e-81
WP_079218948.1|5358989_5359418_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0D4DCG1	Acinetobacter_phage	39.5	1.4e-14
WP_079218949.1|5359569_5359752_-	type II toxin-antitoxin system HicA family toxin	NA	A0A0R6PJD4	Moraxella_phage	60.0	7.2e-16
WP_079218950.1|5359882_5360278_+	hypothetical protein	NA	NA	NA	NA	NA
WP_079218951.1|5360306_5360951_+	SOS response-associated peptidase family protein	NA	C7BGE4	Burkholderia_phage	45.8	1.0e-48
