assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002025205.1_ASM202520v1	NZ_CP019947	Pseudomonas sp. CC6-YY-74 chromosome, complete genome	1	500776-500876	1	CRISPRCasFinder	no	DinG	DEDDh,csa3,DinG,cas3	Type IV-A	GCGCAGCGACAGCCCGCCAGCTTT	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,DinG,cas3	NA|99aa|up_2|NZ_CP019947.1_499632_499929_+,NA|53aa|up_0|NZ_CP019947.1_500569_500728_+,NA	NA|262aa|up_9|NZ_CP019947.1_486424_487210_+	TIGR03234, OH-pyruv-isom, hydroxypyruvate isomerase	NA|557aa|up_8|NZ_CP019947.1_487305_488976_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|863aa|up_7|NZ_CP019947.1_489271_491860_-	COG2943, MdoH, Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]	NA|529aa|up_6|NZ_CP019947.1_491856_493443_-	PRK13274, mdoG, glucan biosynthesis protein G; Provisional	NA|417aa|up_5|NZ_CP019947.1_493549_494800_-	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism]	NA|443aa|up_4|NZ_CP019947.1_495141_496470_+	cd17328, MFS_spinster_like, Protein spinster and spinster homologs of the Major Facilitator Superfamily of transporters	NA|948aa|up_3|NZ_CP019947.1_496612_499456_-	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|99aa|up_2|NZ_CP019947.1_499632_499929_+	NA	NA|203aa|up_1|NZ_CP019947.1_499964_500573_+	COG3145, AlkB, Alkylated DNA repair protein [DNA replication, recombination, and repair]	NA|53aa|up_0|NZ_CP019947.1_500569_500728_+	NA	NA|365aa|down_0|NZ_CP019947.1_501269_502364_-	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein	NA|306aa|down_1|NZ_CP019947.1_502360_503278_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|322aa|down_2|NZ_CP019947.1_503285_504251_-	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional	NA|217aa|down_3|NZ_CP019947.1_504252_504903_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|169aa|down_4|NZ_CP019947.1_505014_505521_-	pfam09351, DUF1993, Domain of unknown function (DUF1993)	NA|157aa|down_5|NZ_CP019947.1_505705_506176_-	cd03449, R_hydratase, (R)-hydratase [(R)-specific enoyl-CoA hydratase] catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway	NA|321aa|down_6|NZ_CP019947.1_506172_507135_-	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|563aa|down_7|NZ_CP019947.1_507361_509050_+	PRK12492, PRK12492, long-chain-fatty-acid--CoA ligase; Provisional	NA|563aa|down_8|NZ_CP019947.1_509334_511023_+	PRK05677, PRK05677, long-chain-fatty-acid--CoA ligase; Validated	NA|1362aa|down_9|NZ_CP019947.1_511310_515396_+	PRK11131, PRK11131, ATP-dependent RNA helicase HrpA; Provisional
GCF_002025205.1_ASM202520v1	NZ_CP019947	Pseudomonas sp. CC6-YY-74 chromosome, complete genome	2	2498441-2498555	2	CRISPRCasFinder	no		DEDDh,csa3,DinG,cas3	Orphan	GGGCTTGCGGCCTTCGCGGCCATGGGCCG	29	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,DinG,cas3	NA|162aa|up_4|NZ_CP019947.1_2491754_2492240_-,NA|219aa|up_3|NZ_CP019947.1_2492368_2493025_-,NA	NA|219aa|up_9|NZ_CP019947.1_2484583_2485240_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|361aa|up_8|NZ_CP019947.1_2485246_2486329_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|1048aa|up_7|NZ_CP019947.1_2486330_2489474_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|124aa|up_6|NZ_CP019947.1_2490030_2490402_+	pfam11070, DUF2871, Protein of unknown function (DUF2871)	NA|451aa|up_5|NZ_CP019947.1_2490402_2491755_-	pfam13185, GAF_2, GAF domain	NA|162aa|up_4|NZ_CP019947.1_2491754_2492240_-	NA	NA|219aa|up_3|NZ_CP019947.1_2492368_2493025_-	NA	NA|277aa|up_2|NZ_CP019947.1_2493049_2493880_-	cd19138, AKR_YeaE, Escherichia coli YeaE and similar proteins	NA|244aa|up_1|NZ_CP019947.1_2494127_2494859_-	TIGR01983, Ubiquinone_biosynthesis_O-methyltransferase, ubiquinone biosynthesis O-methyltransferase	NA|1036aa|up_0|NZ_CP019947.1_2495066_2498174_+	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane]	NA|74aa|down_0|NZ_CP019947.1_2498589_2498811_-	pfam09905, VF530, DNA-binding protein VF530	NA|188aa|down_1|NZ_CP019947.1_2498947_2499511_-	COG5553, COG5553, Predicted metal-dependent enzyme of the double-stranded beta helix superfamily [General function prediction only]	NA|545aa|down_2|NZ_CP019947.1_2499621_2501256_-	pfam02028, BCCT, BCCT, betaine/carnitine/choline family transporter	NA|518aa|down_3|NZ_CP019947.1_2501722_2503276_-	pfam02028, BCCT, BCCT, betaine/carnitine/choline family transporter	NA|416aa|down_4|NZ_CP019947.1_2503604_2504852_-	COG0006, PepP, Xaa-Pro aminopeptidase [Amino acid transport and metabolism]	NA|433aa|down_5|NZ_CP019947.1_2504899_2506198_-	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily	NA|124aa|down_6|NZ_CP019947.1_2506281_2506653_-	COG4766, EutQ, Ethanolamine utilization protein [Amino acid transport and metabolism]	NA|443aa|down_7|NZ_CP019947.1_2506649_2507978_-	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	NA|473aa|down_8|NZ_CP019947.1_2507988_2509407_-	PRK04965, PRK04965, NADH:flavorubredoxin reductase NorW	NA|482aa|down_9|NZ_CP019947.1_2509412_2510858_-	cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like
GCF_002025205.1_ASM202520v1	NZ_CP019947	Pseudomonas sp. CC6-YY-74 chromosome, complete genome	3	3085397-3085945	1	CRT	no		DEDDh,csa3,DinG,cas3	Orphan	CGGCCCTATCGGCCTGAAGGGCGACAAAGGCGACAA	36	2	2	3085487-3085504|3085604-3085621	NZ_CP019947.1_458733-458750|NZ_CP019947.1_3085379-3085396	NA	9	9	Orphan	DEDDh,csa3,DinG,cas3	NA|55aa|up_7|NZ_CP019947.1_3073343_3073508_+,NA|101aa|down_0|NZ_CP019947.1_3086273_3086576_+,NA|98aa|down_1|NZ_CP019947.1_3086992_3087286_+	NA|311aa|up_9|NZ_CP019947.1_3069363_3070296_-	pfam06977, SdiA-regulated, SdiA-regulated	NA|284aa|up_8|NZ_CP019947.1_3072409_3073261_+	cd00293, USP_Like, Usp: Universal stress protein family	NA|55aa|up_7|NZ_CP019947.1_3073343_3073508_+	NA	NA|374aa|up_6|NZ_CP019947.1_3073697_3074819_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|113aa|up_5|NZ_CP019947.1_3075052_3075391_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|374aa|up_4|NZ_CP019947.1_3075696_3076818_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|373aa|up_3|NZ_CP019947.1_3077088_3078207_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|644aa|up_2|NZ_CP019947.1_3078357_3080289_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|589aa|up_1|NZ_CP019947.1_3080418_3082185_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|770aa|up_0|NZ_CP019947.1_3082346_3084656_-	PRK11240, PRK11240, penicillin-binding protein 1C; Provisional	NA|101aa|down_0|NZ_CP019947.1_3086273_3086576_+	NA	NA|98aa|down_1|NZ_CP019947.1_3086992_3087286_+	NA	NA|1635aa|down_2|NZ_CP019947.1_3087362_3092267_-	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|155aa|down_3|NZ_CP019947.1_3092565_3093030_-	cd04332, YbaK_like, YbaK-like	NA|457aa|down_4|NZ_CP019947.1_3093223_3094594_+	cd13136, MATE_DinF_like, DinF and similar proteins, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|152aa|down_5|NZ_CP019947.1_3094633_3095089_+	pfam09980, DUF2214, Predicted membrane protein (DUF2214)	NA|638aa|down_6|NZ_CP019947.1_3095364_3097278_-	PRK05354, PRK05354, biosynthetic arginine decarboxylase	NA|124aa|down_7|NZ_CP019947.1_3097404_3097776_-	PRK06824, PRK06824, translation initiation factor Sui1; Validated	NA|179aa|down_8|NZ_CP019947.1_3098104_3098641_-	cd04697, Nudix_Hydrolase_38, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|356aa|down_9|NZ_CP019947.1_3098644_3099712_-	pfam10095, DUF2333, Uncharacterized protein conserved in bacteria (DUF2333)
GCF_002025205.1_ASM202520v1	NZ_CP019947	Pseudomonas sp. CC6-YY-74 chromosome, complete genome	4	3146271-3146407	3	CRISPRCasFinder	no		DEDDh,csa3,DinG,cas3	Orphan	CGGGCGGCGATCCGTTCGGAGCGCAGCGACAGCCCGCCAGTTTT	44	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,DinG,cas3	NA,NA	NA|242aa|up_9|NZ_CP019947.1_3133447_3134173_+	COG2356, EndA, Endonuclease I [DNA replication, recombination, and repair]	NA|209aa|up_8|NZ_CP019947.1_3134264_3134891_-	COG2863, COG2863, Cytochrome c553 [Energy production and conversion]	NA|140aa|up_7|NZ_CP019947.1_3135160_3135580_-	cd04629, CBS_pair_bac, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria	NA|273aa|up_6|NZ_CP019947.1_3135765_3136584_+	cd11297, PIN_LabA-like_N_1, uncharacterized subfamily of N-terminal LabA-like PIN domains	NA|362aa|up_5|NZ_CP019947.1_3136642_3137728_+	COG4748, COG4748, Uncharacterized conserved protein [Function unknown]	NA|467aa|up_4|NZ_CP019947.1_3139077_3140478_+	PRK05035, PRK05035, electron transport complex protein RnfC; Provisional	NA|323aa|up_3|NZ_CP019947.1_3140474_3141443_+	pfam03116, NQR2_RnfD_RnfE, NQR2, RnfD, RnfE family	NA|499aa|up_2|NZ_CP019947.1_3142142_3143639_-	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2	NA|449aa|up_1|NZ_CP019947.1_3143788_3145135_-	PRK09221, PRK09221, beta alanine--pyruvate transaminase; Provisional	NA|307aa|up_0|NZ_CP019947.1_3145292_3146213_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|308aa|down_0|NZ_CP019947.1_3146619_3147543_+	cd19095, AKR_PA4992-like, Pseudomona aeruginosa PA4992 and similar proteins	NA|438aa|down_1|NZ_CP019947.1_3147752_3149066_+	COG3202, COG3202, ATP/ADP translocase [Energy production and conversion]	NA|223aa|down_2|NZ_CP019947.1_3149305_3149974_+	pfam08362, TetR_C_3, YcdC-like protein, C-terminal region	NA|195aa|down_3|NZ_CP019947.1_3149973_3150558_+	COG1739, COG1739, Uncharacterized conserved protein [Function unknown]	NA|150aa|down_4|NZ_CP019947.1_3150644_3151094_-	pfam01797, Y1_Tnp, Transposase IS200 like	NA|452aa|down_5|NZ_CP019947.1_3151353_3152709_+	PRK08203, PRK08203, hydroxydechloroatrazine ethylaminohydrolase; Reviewed	NA|316aa|down_6|NZ_CP019947.1_3152894_3153842_+	PRK09358, PRK09358, adenosine deaminase; Provisional	NA|253aa|down_7|NZ_CP019947.1_3153991_3154750_+	cd13704, PBP2_HisK, The periplasmic sensor domain of histidine kinase receptors; the type 2 periplasmic binding fold protein	NA|423aa|down_8|NZ_CP019947.1_3154817_3156086_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|247aa|down_9|NZ_CP019947.1_3156106_3156847_+	cd13704, PBP2_HisK, The periplasmic sensor domain of histidine kinase receptors; the type 2 periplasmic binding fold protein
GCF_002025205.1_ASM202520v1	NZ_CP019947	Pseudomonas sp. CC6-YY-74 chromosome, complete genome	5	3175485-3175602	4	CRISPRCasFinder	no		DEDDh,csa3,DinG,cas3	Orphan	GCCGCCCTACCCGCAGGCAGTGCACCATGGTTTATCGGCGC	41	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,DinG,cas3	NA,NA	NA|339aa|up_9|NZ_CP019947.1_3161234_3162251_+	cd08252, AL_MDR, Arginate lyase and other MDR family members	NA|90aa|up_8|NZ_CP019947.1_3162363_3162633_+	pfam10976, DUF2790, Protein of unknown function (DUF2790)	NA|613aa|up_7|NZ_CP019947.1_3162827_3164666_+	PRK11359, PRK11359, cyclic-di-GMP phosphodiesterase; Provisional	NA|397aa|up_6|NZ_CP019947.1_3165379_3166570_-	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|1046aa|up_5|NZ_CP019947.1_3166836_3169974_-	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family	NA|383aa|up_4|NZ_CP019947.1_3169986_3171135_-	PRK09578, PRK09578, MexX/AxyX family multidrug efflux RND transporter periplasmic adaptor subunit	NA|209aa|up_3|NZ_CP019947.1_3171281_3171908_+	PRK09975, PRK09975, DNA-binding transcriptional regulator EnvR; Provisional	NA|71aa|up_2|NZ_CP019947.1_3172094_3172307_-	COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism]	NA|796aa|up_1|NZ_CP019947.1_3172459_3174847_+	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B	NA|139aa|up_0|NZ_CP019947.1_3174988_3175405_+	cd01108, HTH_CueR, Helix-Turn-Helix DNA binding domain of CueR-like transcription regulators	NA|198aa|down_0|NZ_CP019947.1_3175644_3176238_-	COG0546, Gph, Predicted phosphatases [General function prediction only]	NA|290aa|down_1|NZ_CP019947.1_3176254_3177124_-	COG1946, TesB, Acyl-CoA thioesterase [Lipid metabolism]	NA|534aa|down_2|NZ_CP019947.1_3177143_3178745_-	cd02142, McbC_SagB-like_oxidoreductase, oxidase similar to the microcin B17 processing protein McbC	NA|307aa|down_3|NZ_CP019947.1_3178814_3179735_+	cd09993, HDAC_classIV, Histone deacetylase class IV also known as histone deacetylase 11	NA|659aa|down_4|NZ_CP019947.1_3179775_3181752_-	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair]	NA|272aa|down_5|NZ_CP019947.1_3182175_3182991_-	PRK11148, PRK11148, cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional	NA|151aa|down_6|NZ_CP019947.1_3183157_3183610_-	COG3151, COG3151, Uncharacterized protein conserved in bacteria [Function unknown]	NA|206aa|down_7|NZ_CP019947.1_3183600_3184218_-	PRK10729, nudF, ADP-ribose pyrophosphatase NudF; Provisional	NA|247aa|down_8|NZ_CP019947.1_3184415_3185156_+	pfam11738, DUF3298, Protein of unknown function (DUF3298)	NA|431aa|down_9|NZ_CP019947.1_3185124_3186417_-	TIGR02358, purine-cytosine_transport_protein, putative hydroxymethylpyrimidine transporter CytX
GCF_002025205.1_ASM202520v1	NZ_CP019947	Pseudomonas sp. CC6-YY-74 chromosome, complete genome	6	3768043-3768180	5	CRISPRCasFinder	no		DEDDh,csa3,DinG,cas3	Orphan	ATCACTCTGACCCCTTTAGTTAT	23	0	0	NA	NA	NA	2	2	Orphan	DEDDh,csa3,DinG,cas3	NA|129aa|up_8|NZ_CP019947.1_3760890_3761277_+,NA|70aa|down_0|NZ_CP019947.1_3768340_3768550_-,NA|229aa|down_2|NZ_CP019947.1_3769870_3770557_-,NA|294aa|down_3|NZ_CP019947.1_3771213_3772095_-,NA|241aa|down_4|NZ_CP019947.1_3772091_3772814_-,NA|93aa|down_7|NZ_CP019947.1_3779585_3779864_+	NA|465aa|up_9|NZ_CP019947.1_3759375_3760770_+	PRK00855, PRK00855, argininosuccinate lyase; Provisional	NA|129aa|up_8|NZ_CP019947.1_3760890_3761277_+	NA	NA|207aa|up_7|NZ_CP019947.1_3761471_3762092_+	cd03180, GST_C_2, C-terminal, alpha helical domain of an unknown subfamily 2 of Glutathione S-transferases	NA|142aa|up_6|NZ_CP019947.1_3762158_3762584_-	COG1732, OpuBC, Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) [Cell envelope biogenesis, outer membrane]	NA|245aa|up_5|NZ_CP019947.1_3762842_3763577_+	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism]	NA|108aa|up_4|NZ_CP019947.1_3763579_3763903_+	COG4392, COG4392, Predicted membrane protein [Function unknown]	NA|224aa|up_3|NZ_CP019947.1_3764424_3765096_+	COG1462, CsgG, Uncharacterized protein involved in formation of curli polymers [Cell envelope biogenesis, outer membrane]	NA|116aa|up_2|NZ_CP019947.1_3765127_3765475_+	COG4259, COG4259, Uncharacterized protein conserved in bacteria [Function unknown]	NA|225aa|up_1|NZ_CP019947.1_3765484_3766159_+	pfam05643, DUF799, Putative bacterial lipoprotein (DUF799)	NA|321aa|up_0|NZ_CP019947.1_3766971_3767934_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|70aa|down_0|NZ_CP019947.1_3768340_3768550_-	NA	NA|310aa|down_1|NZ_CP019947.1_3768604_3769534_+	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional	NA|229aa|down_2|NZ_CP019947.1_3769870_3770557_-	NA	NA|294aa|down_3|NZ_CP019947.1_3771213_3772095_-	NA	NA|241aa|down_4|NZ_CP019947.1_3772091_3772814_-	NA	NA|1009aa|down_5|NZ_CP019947.1_3774492_3777519_-	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase	NA|222aa|down_6|NZ_CP019947.1_3778778_3779444_-	cd10424, GST_C_9, C-terminal, alpha helical domain of an unknown subfamily 9 of Glutathione S-transferases	NA|93aa|down_7|NZ_CP019947.1_3779585_3779864_+	NA	NA|82aa|down_8|NZ_CP019947.1_3780001_3780247_+	TIGR02647, protein_inhibitor_Id-2-related_protein, TIGR02647 family protein	NA|952aa|down_9|NZ_CP019947.1_3780368_3783224_+	PRK09450, cyaA, class I adenylate cyclase
