The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP019947	Pseudomonas sp. CC6-YY-74 chromosome, complete genome	5040792	382551	436682	5040792	portal,terminase,protease,head,tRNA,capsid,holin	Marinobacter_phage(12.5%)	56	NA	NA
WP_079201106.1|382551_383904_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_079201107.1|383978_386339_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
WP_079201108.1|386386_386890_+	OmpH family outer membrane protein	NA	NA	NA	NA	NA
WP_079201109.1|386892_387951_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
WP_079201110.1|387998_388439_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
WP_079201111.1|388435_389212_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
WP_079201112.1|389215_390349_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
WP_079201113.1|390348_390945_+	ribonuclease HII	NA	V5LS49	Emiliania_huxleyi_virus	40.7	7.1e-28
WP_079201114.1|391074_394593_+	DNA polymerase III subunit alpha	NA	A0A0K1Y906	Streptomyces_phage	36.4	6.2e-196
WP_079201115.1|394778_395729_+	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA	NA
WP_079201116.1|395830_397147_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
WP_079201117.1|397324_398956_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	53.1	8.4e-156
WP_079201118.1|398971_399805_+	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	41.2	3.5e-49
WP_079201119.1|399946_401236_+	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	59.9	2.9e-135
WP_079201120.1|401342_401621_+	cell division protein FtsB	NA	NA	NA	NA	NA
WP_079201121.1|401636_402347_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_079201122.1|402436_403327_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_079201123.1|403495_404608_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	29.1	1.5e-34
WP_079201124.1|404695_405538_+	S-formylglutathione hydrolase	NA	NA	NA	NA	NA
WP_079201125.1|405677_406151_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
WP_079201126.1|406147_407206_+|tRNA	tRNA pseudouridine(13) synthase TruD	tRNA	NA	NA	NA	NA
WP_079201127.1|407193_407943_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	52.2	1.8e-65
WP_177345257.1|407984_408620_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	51.7	2.7e-41
WP_079201129.1|408646_409585_+	DUF368 domain-containing protein	NA	NA	NA	NA	NA
WP_079201130.1|409641_410502_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A0S2SXL7	Bacillus_phage	33.3	1.1e-05
WP_079201131.1|410606_411611_+	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	35.4	5.0e-34
WP_079201132.1|412047_412371_-	ferredoxin family protein	NA	NA	NA	NA	NA
WP_177345258.1|412515_415083_-	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	23.2	1.5e-26
WP_079201134.1|415094_416387_-	DUF3596 domain-containing protein	NA	S4TSP2	Salmonella_phage	35.7	3.9e-63
WP_079201135.1|416353_416551_-	excisionase	NA	Q774Z6	Bordetella_phage	40.0	5.6e-06
WP_079201136.1|416622_417210_+	hypothetical protein	NA	NA	NA	NA	NA
WP_079201137.1|417515_418208_-	hypothetical protein	NA	A0A1W6JP41	Morganella_phage	31.6	3.7e-20
WP_079201138.1|418204_418432_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079201139.1|418428_419139_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079201140.1|419184_419511_-	pyocin activator PrtN family protein	NA	NA	NA	NA	NA
WP_079201141.1|419503_419701_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079201142.1|419697_419988_-	phage antirepressor KilAC domain-containing protein	NA	NA	NA	NA	NA
WP_079201143.1|419997_420552_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079201144.1|420548_420731_-	hypothetical protein	NA	NA	NA	NA	NA
WP_154067027.1|420818_421673_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079201145.1|421675_423322_-	AAA family ATPase	NA	K7PHD1	Enterobacteria_phage	27.3	1.8e-33
WP_079201146.1|423344_423992_-	peptidase S24	NA	Q8SBF6	Shigella_phage	36.9	1.1e-26
WP_079201147.1|424090_424324_+	hypothetical protein	NA	NA	NA	NA	NA
WP_079201148.1|424659_425178_+	hypothetical protein	NA	NA	NA	NA	NA
WP_079201149.1|425170_425389_+	TraR/DksA C4-type zinc finger protein	NA	NA	NA	NA	NA
WP_079201150.1|425378_427598_+	toprim domain-containing protein	NA	A0A2D1GN57	Marinobacter_phage	46.4	9.6e-187
WP_079201151.1|427590_427950_+	hypothetical protein	NA	NA	NA	NA	NA
WP_079201152.1|428479_428830_+|holin	pyocin R2, holin	holin	NA	NA	NA	NA
WP_079201153.1|428826_429609_+	hypothetical protein	NA	A0A1B0Z000	Pseudomonas_phage	46.5	8.1e-48
WP_079201154.1|429741_430260_+|terminase	terminase small subunit	terminase	A0A2D1GMW4	Marinobacter_phage	39.9	1.8e-19
WP_079204869.1|430312_432202_+|terminase	phage terminase large subunit family protein	terminase	A0A2D1GMT1	Marinobacter_phage	49.1	1.0e-168
WP_079201155.1|432210_432426_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154067150.1|432464_434039_+|portal	phage portal protein	portal	A0A067ZJA4	Vibrio_phage	42.5	3.5e-98
WP_079201157.1|434042_435275_+	S49 family peptidase	NA	A0A219YAK4	Aeromonas_phage	39.8	2.7e-53
WP_079201158.1|435287_435638_+|head	head decoration protein	head	A0A291AUM0	Sinorhizobium_phage	48.6	2.3e-18
WP_079201159.1|435653_436682_+|capsid	major capsid protein	capsid	A0A0C5ABI0	Bacteriophage	41.2	1.7e-69
>prophage 2
NZ_CP019947	Pseudomonas sp. CC6-YY-74 chromosome, complete genome	5040792	1513025	1520308	5040792	tRNA	uncultured_Caudovirales_phage(85.71%)	9	NA	NA
WP_079202037.1|1513025_1514306_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	55.1	1.0e-100
WP_079202038.1|1514430_1515825_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_079202039.1|1516073_1517075_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_079202040.1|1517165_1518149_-	glycosyl transferase family protein	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	78.2	2.3e-148
WP_079202041.1|1518145_1518481_-	TusE/DsrC/DsvC family sulfur relay protein	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	72.1	2.9e-39
WP_079202042.1|1518477_1518777_-	sulfurtransferase complex subunit TusB	NA	A0A2H4JG28	uncultured_Caudovirales_phage	64.6	2.3e-27
WP_079202043.1|1518776_1519136_-	sulfurtransferase complex subunit TusC	NA	A0A2H4J8C0	uncultured_Caudovirales_phage	58.3	2.0e-30
WP_079202044.1|1519137_1519530_-	sulfurtransferase complex subunit TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	75.4	3.3e-50
WP_079202045.1|1519639_1520308_-	Bax inhibitor-1/YccA family protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	83.0	3.8e-94
>prophage 3
NZ_CP019947	Pseudomonas sp. CC6-YY-74 chromosome, complete genome	5040792	1789972	1812119	5040792	transposase	Staphylococcus_prophage(40.0%)	17	NA	NA
WP_079202256.1|1789972_1791001_-|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.9	6.5e-45
WP_154067061.1|1790910_1791510_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079202257.1|1791607_1791943_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079202258.1|1791942_1793130_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_154067062.1|1793940_1794258_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079202260.1|1794227_1795754_-|transposase	IS66 family transposase	transposase	S5VTD3	Leptospira_phage	36.6	5.8e-82
WP_154067063.1|1795898_1797453_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_079202261.1|1797875_1798520_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_079202256.1|1798613_1799642_-|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.9	6.5e-45
WP_079202262.1|1799773_1802380_-	acyltransferase	NA	A0A1R3Y5Q6	Salmonella_virus	32.4	1.6e-63
WP_079202263.1|1802876_1803323_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079202264.1|1803445_1805212_-	SLC13 family permease	NA	NA	NA	NA	NA
WP_079202265.1|1805268_1806237_-	acetyltransferase	NA	NA	NA	NA	NA
WP_079202266.1|1807364_1809077_-	hypothetical protein	NA	NA	NA	NA	NA
WP_177345269.1|1809183_1810383_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_079202268.1|1810485_1811139_-	sulfotransferase family 2 domain-containing protein	NA	NA	NA	NA	NA
WP_079202269.1|1811156_1812119_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	34.5	2.2e-39
>prophage 4
NZ_CP019947	Pseudomonas sp. CC6-YY-74 chromosome, complete genome	5040792	3491299	3500155	5040792	integrase	Enterobacteria_phage(50.0%)	7	3488441:3488454	3497967:3497980
3488441:3488454	attL	CTGAAACAGGAAGT	NA	NA	NA	NA
WP_177345236.1|3491299_3492556_-|integrase	tyrosine-type recombinase/integrase	integrase	K7PLT1	Enterobacteria_phage	22.4	7.7e-16
WP_079203594.1|3493365_3494439_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	52.8	1.6e-99
WP_079203595.1|3494435_3495308_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	66.0	7.8e-108
WP_079203596.1|3495304_3495850_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.9	5.7e-48
WP_079203597.1|3495846_3496722_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	33.3	1.4e-27
WP_079203598.1|3496946_3498761_+	sensor histidine kinase	NA	NA	NA	NA	NA
3497967:3497980	attR	CTGAAACAGGAAGT	NA	NA	NA	NA
WP_079203599.1|3498757_3500155_+	sigma-54-dependent Fis family transcriptional regulator	NA	W8CYM9	Bacillus_phage	31.3	3.2e-10
