assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002012225.1_ASM201222v1	NZ_CP019029	Escherichia coli strain Ecol_881	1	505840-505963	1	CRISPRCasFinder	no	DEDDh	DEDDh,DinG,cas3,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA|30aa|down_7|NZ_CP019029.1_514859_514949_+	NA|471aa|up_9|NZ_CP019029.1_495292_496705_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP019029.1_497261_497471_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP019029.1_497926_498553_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP019029.1_498573_500676_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_5|NZ_CP019029.1_500688_501327_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP019029.1_501390_502059_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP019029.1_502055_502841_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP019029.1_502844_503657_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP019029.1_503668_505273_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP019029.1_505398_505704_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP019029.1_506277_507534_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP019029.1_507574_508948_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP019029.1_509162_509804_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP019029.1_509843_510992_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP019029.1_511282_512494_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP019029.1_512606_513539_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP019029.1_513535_514561_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP019029.1_514859_514949_+	NA	NA|390aa|down_8|NZ_CP019029.1_515114_516284_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP019029.1_516429_517011_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_002012225.1_ASM201222v1	NZ_CP019029	Escherichia coli strain Ecol_881	2	1190519-1190610	2	CRISPRCasFinder	no		DEDDh,DinG,cas3,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA|70aa|up_9|NZ_CP019029.1_1179769_1179979_-,NA	NA|70aa|up_9|NZ_CP019029.1_1179769_1179979_-	NA	NA|1321aa|up_8|NZ_CP019029.1_1180033_1183996_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP019029.1_1184035_1184674_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP019029.1_1184961_1186053_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP019029.1_1186052_1186745_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP019029.1_1186756_1187143_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP019029.1_1187150_1187951_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP019029.1_1187960_1188551_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP019029.1_1188561_1189056_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP019029.1_1189076_1190405_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP019029.1_1191033_1191630_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP019029.1_1191650_1191878_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP019029.1_1191915_1193157_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|419aa|down_3|NZ_CP019029.1_1193449_1194706_-	PRK09784, PRK09784, YccE family protein	NA|307aa|down_4|NZ_CP019029.1_1194965_1195886_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_5|NZ_CP019029.1_1195885_1196191_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_6|NZ_CP019029.1_1196342_1196942_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_7|NZ_CP019029.1_1196938_1199485_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_8|NZ_CP019029.1_1199484_1200657_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_9|NZ_CP019029.1_1200786_1201479_+	PRK10766, PRK10766, two-component system response regulator TorR
GCF_002012225.1_ASM201222v1	NZ_CP019029	Escherichia coli strain Ecol_881	3	1323596-1323743	3,1	CRISPRCasFinder,PILER-CR	no		DEDDh,DinG,cas3,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	TTTCTAAGCTGCCTGTACGGCAGTGAAC,TTTCTAAGCTGCCTGTACGGCAGTGAAC	28,28	0	0	NA	NA	I-F:I-F	2,2	2	Orphan	DEDDh,DinG,cas3,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|431aa|up_9|NZ_CP019029.1_1308635_1309928_-	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|448aa|up_8|NZ_CP019029.1_1310018_1311362_-	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|204aa|up_7|NZ_CP019029.1_1311372_1311984_-	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|1357aa|up_6|NZ_CP019029.1_1312141_1316212_-	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|165aa|up_5|NZ_CP019029.1_1316346_1316841_-	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|322aa|up_4|NZ_CP019029.1_1317384_1318350_+	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|589aa|up_3|NZ_CP019029.1_1318472_1320239_+	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|574aa|up_2|NZ_CP019029.1_1320239_1321961_+	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|235aa|up_1|NZ_CP019029.1_1322002_1322707_+	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|73aa|up_0|NZ_CP019029.1_1322991_1323210_+	PRK00276, infA, translation initiation factor IF-1; Validated	NA|759aa|down_0|NZ_CP019029.1_1323957_1326234_-	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	NA|107aa|down_1|NZ_CP019029.1_1326264_1326585_-	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|75aa|down_2|NZ_CP019029.1_1326907_1327132_+	PRK09937, PRK09937, cold shock-like protein CspD	NA|649aa|down_3|NZ_CP019029.1_1327204_1329151_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|372aa|down_4|NZ_CP019029.1_1329147_1330263_-	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|319aa|down_5|NZ_CP019029.1_1330413_1331370_+	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown]	NA|553aa|down_6|NZ_CP019029.1_1331366_1333025_-	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|232aa|down_7|NZ_CP019029.1_1333450_1334146_+	PRK05420, PRK05420, aquaporin Z; Provisional	NA|342aa|down_8|NZ_CP019029.1_1334378_1335404_+	COG3547, COG3547, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|300aa|down_9|NZ_CP019029.1_1335989_1336889_+	COG2431, COG2431, Predicted membrane protein [Function unknown]
GCF_002012225.1_ASM201222v1	NZ_CP019029	Escherichia coli strain Ecol_881	4	2280079-2280211	2	PILER-CR	no		DEDDh,DinG,cas3,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	ATCACCAATATTGAAAA	17	0	0	NA	NA	NA	2	2	Orphan	DEDDh,DinG,cas3,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|105aa|up_9|NZ_CP019029.1_2271451_2271766_-	pfam01845, CcdB, CcdB protein	NA|78aa|up_8|NZ_CP019029.1_2271768_2272002_-	COG5302, COG5302, Post-segregation antitoxin (ccd killing mechanism protein) encoded by the F plasmid [General function prediction only]	NA|160aa|up_7|NZ_CP019029.1_2272087_2272567_-	PRK10769, folA, type 3 dihydrofolate reductase	NA|621aa|up_6|NZ_CP019029.1_2272758_2274621_-	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|177aa|up_5|NZ_CP019029.1_2274613_2275144_-	PRK00871, PRK00871, glutathione-regulated potassium-efflux system oxidoreductase KefF	NA|444aa|up_4|NZ_CP019029.1_2275251_2276583_-	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|96aa|up_3|NZ_CP019029.1_2276640_2276928_-	PRK15449, PRK15449, ferredoxin-like protein FixX; Provisional	NA|429aa|up_2|NZ_CP019029.1_2276924_2278211_-	PRK10157, PRK10157, putative oxidoreductase FixC; Provisional	NA|314aa|up_1|NZ_CP019029.1_2278261_2279203_-	PRK03363, fixB, electron transfer flavoprotein subunit alpha/FixB family protein	NA|257aa|up_0|NZ_CP019029.1_2279217_2279988_-	PRK03359, PRK03359, putative electron transfer flavoprotein FixA; Reviewed	NA|505aa|down_0|NZ_CP019029.1_2280460_2281975_+	PRK03356, PRK03356, L-carnitine/gamma-butyrobetaine antiport BCCT transporter	NA|381aa|down_1|NZ_CP019029.1_2282005_2283148_+	PRK03354, PRK03354, crotonobetainyl-CoA dehydrogenase; Validated	NA|406aa|down_2|NZ_CP019029.1_2283276_2284494_+	PRK03525, PRK03525, L-carnitine CoA-transferase	NA|518aa|down_3|NZ_CP019029.1_2284566_2286120_+	PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated	NA|262aa|down_4|NZ_CP019029.1_2286228_2287014_+	PRK03580, PRK03580, crotonobetainyl-CoA hydratase	NA|197aa|down_5|NZ_CP019029.1_2287019_2287610_+	PRK13627, PRK13627, carnitine operon protein CaiE; Provisional	NA|132aa|down_6|NZ_CP019029.1_2287728_2288124_-	PRK11476, PRK11476, carnitine metabolism transcriptional regulator CaiF	NA|1074aa|down_7|NZ_CP019029.1_2288384_2291606_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|383aa|down_8|NZ_CP019029.1_2291623_2292772_-	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|274aa|down_9|NZ_CP019029.1_2293227_2294049_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]
GCF_002012225.1_ASM201222v1	NZ_CP019029	Escherichia coli strain Ecol_881	5	2368656-2368820	4	CRISPRCasFinder	no		DEDDh,DinG,cas3,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	CCGTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACCAAACCTGCACGTTAG	54	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|288aa|up_9|NZ_CP019029.1_2359588_2360452_+	TIGR04041, glycine_radical_enzyme_activase_YjjW_family, glycine radical enzyme activase, YjjW family	NA|260aa|up_8|NZ_CP019029.1_2360970_2361750_-	PRK11449, PRK11449, metal-dependent hydrolase	NA|358aa|up_7|NZ_CP019029.1_2361746_2362820_-	COG4667, COG4667, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]	NA|54aa|up_6|NZ_CP019029.1_2362941_2363103_-	COG5487, COG5487, Small integral membrane protein [Function unknown]	NA|202aa|up_5|NZ_CP019029.1_2363229_2363835_-	PRK10568, PRK10568, molecular chaperone OsmY	NA|530aa|up_4|NZ_CP019029.1_2364227_2365817_-	PRK00741, prfC, peptide chain release factor 3; Provisional	NA|226aa|up_3|NZ_CP019029.1_2365907_2366585_-	PRK09449, PRK09449, dUMP phosphatase; Provisional	NA|149aa|up_2|NZ_CP019029.1_2366599_2367046_-	PRK09491, rimI, ribosomal-protein-alanine N-acetyltransferase; Provisional	NA|138aa|up_1|NZ_CP019029.1_2367014_2367428_-	PRK06856, PRK06856, DNA polymerase III subunit psi; Validated	NA|344aa|up_0|NZ_CP019029.1_2367530_2368562_+	PRK09489, rsmC, 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	NA|79aa|down_0|NZ_CP019029.1_2369301_2369538_-	pfam07256, DUF1435, Protein of unknown function (DUF1435)	NA|263aa|down_1|NZ_CP019029.1_2369678_2370467_+	PRK10647, PRK10647, ferric iron reductase involved in ferric hydroximate transport; Provisional	NA|226aa|down_2|NZ_CP019029.1_2370504_2371182_-	PRK11475, PRK11475, DNA-binding transcriptional activator BglJ; Provisional	NA|242aa|down_3|NZ_CP019029.1_2371139_2371865_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|257aa|down_4|NZ_CP019029.1_2372483_2373254_+	COG2966, COG2966, Uncharacterized conserved protein [Function unknown]	NA|158aa|down_5|NZ_CP019029.1_2373244_2373718_+	PRK09917, PRK09917, threonine/serine exporter	NA|180aa|down_6|NZ_CP019029.1_2373824_2374364_+	PRK02854, PRK02854, primosomal protein DnaT	NA|246aa|down_7|NZ_CP019029.1_2374366_2375104_+	PRK07952, PRK07952, DNA replication protein DnaC; Validated	NA|165aa|down_8|NZ_CP019029.1_2375152_2375647_+	PRK11667, PRK11667, hypothetical protein; Provisional	NA|764aa|down_9|NZ_CP019029.1_2375900_2378192_+	PRK03776, PRK03776, phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase
GCF_002012225.1_ASM201222v1	NZ_CP019029	Escherichia coli strain Ecol_881	6	2538693-2538830	5	CRISPRCasFinder	no		DEDDh,DinG,cas3,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Orphan	GAACTCGTAGGCCTGATAAGACGCGGCAGCGTCGCATCAGGC	42	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,cas3,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA|77aa|down_6|NZ_CP019029.1_2545857_2546088_-,NA|118aa|down_7|NZ_CP019029.1_2546074_2546428_-,NA|325aa|down_8|NZ_CP019029.1_2546443_2547418_-	NA|340aa|up_9|NZ_CP019029.1_2526857_2527877_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|188aa|up_8|NZ_CP019029.1_2527880_2528444_-	PRK09825, idnK, gluconokinase	NA|344aa|up_7|NZ_CP019029.1_2528660_2529692_+	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional	NA|255aa|up_6|NZ_CP019029.1_2529715_2530480_+	PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional	NA|440aa|up_5|NZ_CP019029.1_2530541_2531861_+	TIGR00791, Gluconate_permease, gluconate transporter	NA|333aa|up_4|NZ_CP019029.1_2531927_2532926_+	cd01575, PBP1_GntR, ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators	NA|501aa|up_3|NZ_CP019029.1_2533003_2534506_+	pfam05872, DUF853, Bacterial protein of unknown function (DUF853)	NA|361aa|up_2|NZ_CP019029.1_2534666_2535749_-	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional	NA|367aa|up_1|NZ_CP019029.1_2535748_2536849_-	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional	NA|504aa|up_0|NZ_CP019029.1_2537115_2538627_+	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|148aa|down_0|NZ_CP019029.1_2538882_2539326_+	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated	NA|952aa|down_1|NZ_CP019029.1_2539325_2542181_+	PRK05729, valS, valyl-tRNA synthetase; Reviewed	NA|399aa|down_2|NZ_CP019029.1_2542236_2543433_-	COG4269, COG4269, Predicted membrane protein [Function unknown]	NA|168aa|down_3|NZ_CP019029.1_2543625_2544129_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|139aa|down_4|NZ_CP019029.1_2544174_2544591_-	PRK11191, PRK11191, ribonuclease E inhibitor RraB	NA|335aa|down_5|NZ_CP019029.1_2544752_2545757_+	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional	NA|77aa|down_6|NZ_CP019029.1_2545857_2546088_-	NA	NA|118aa|down_7|NZ_CP019029.1_2546074_2546428_-	NA	NA|325aa|down_8|NZ_CP019029.1_2546443_2547418_-	NA	NA|151aa|down_9|NZ_CP019029.1_2547539_2547992_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]
GCF_002012225.1_ASM201222v1	NZ_CP019029	Escherichia coli strain Ecol_881	7	4414601-4415851	3,6,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3	DEDDh,DinG,cas3,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Unclear	GTGTTCCCCGCGCCAGCGGGGATAAACC,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	28,29,29	2	2	4415423-4415455|4415424-4415455	NZ_CP019029.1_4394801-4394769|NZ_CP019029.1_4394800-4394769	I-E:I-E:I-E	20,20,20	20	Unclear	DEDDh,DinG,cas3,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|919aa|up_9|NZ_CP019029.1_4401193_4403950_-	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|434aa|up_8|NZ_CP019029.1_4404006_4405308_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_7|NZ_CP019029.1_4405355_4407590_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_6|NZ_CP019029.1_4407667_4407916_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_5|NZ_CP019029.1_4407915_4408251_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_4|NZ_CP019029.1_4408322_4409114_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_3|NZ_CP019029.1_4409341_4410979_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_2|NZ_CP019029.1_4411065_4412364_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_1|NZ_CP019029.1_4412423_4413296_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|224aa|up_0|NZ_CP019029.1_4413589_4414261_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|493aa|down_0|NZ_CP019029.1_4416488_4417967_-	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|426aa|down_1|NZ_CP019029.1_4417993_4419271_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_2|NZ_CP019029.1_4419589_4420375_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_3|NZ_CP019029.1_4420444_4421899_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_4|NZ_CP019029.1_4421920_4423330_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_5|NZ_CP019029.1_4423307_4424087_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_6|NZ_CP019029.1_4424083_4424944_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_7|NZ_CP019029.1_4425090_4425666_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_8|NZ_CP019029.1_4425682_4425943_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_9|NZ_CP019029.1_4425933_4427205_-	PRK10015, PRK10015, oxidoreductase; Provisional
GCF_002012225.1_ASM201222v1	NZ_CP019029	Escherichia coli strain Ecol_881	8	4441398-4442220	7,2,4	CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	DEDDh,DinG,cas3,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	Type I-E	GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	13,13,12	13	TypeI-E	DEDDh,DinG,cas3,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA,NA	NA|571aa|up_9|NZ_CP019029.1_4429762_4431475_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_8|NZ_CP019029.1_4431548_4432283_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	cas3|889aa|up_7|NZ_CP019029.1_4432641_4435308_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|503aa|up_6|NZ_CP019029.1_4435722_4437231_+	PRK09693, PRK09693, Cascade antiviral complex protein; Validated	cse2gr11|161aa|up_5|NZ_CP019029.1_4437223_4437706_+	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas7|364aa|up_4|NZ_CP019029.1_4437718_4438810_+	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cas5|225aa|up_3|NZ_CP019029.1_4438812_4439487_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas6e|200aa|up_2|NZ_CP019029.1_4439473_4440073_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|306aa|up_1|NZ_CP019029.1_4440088_4441006_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|95aa|up_0|NZ_CP019029.1_4441007_4441292_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP019029.1_4442301_4443339_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP019029.1_4443590_4444499_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP019029.1_4444500_4445928_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP019029.1_4445927_4446533_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP019029.1_4446582_4446906_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP019029.1_4447099_4447411_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP019029.1_4447429_4448140_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP019029.1_4448139_4448619_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP019029.1_4448615_4449665_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP019029.1_4449645_4450407_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_002012225.1_ASM201222v1	NZ_CP019027	Escherichia coli strain Ecol_881 plasmid pEC881_2, complete sequence	1	83737-83992	1	PILER-CR	no	DEDDh	DEDDh	Unclear	GTATGCTGTCAGCGGT	16	0	0	NA	NA	NA	3	3	Orphan	DEDDh,DinG,cas3,RT,csa3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	NA|190aa|up_5|NZ_CP019027.1_76601_77171_-,NA|248aa|up_4|NZ_CP019027.1_77180_77924_-,NA|215aa|up_1|NZ_CP019027.1_81399_82044_-,NA|405aa|up_0|NZ_CP019027.1_82245_83460_+,NA|71aa|down_0|NZ_CP019027.1_84039_84252_-,NA|112aa|down_1|NZ_CP019027.1_84251_84587_-,NA|92aa|down_2|NZ_CP019027.1_84802_85078_-,NA|130aa|down_4|NZ_CP019027.1_85621_86011_-,NA|247aa|down_5|NZ_CP019027.1_86031_86772_-,NA|67aa|down_8|NZ_CP019027.1_88571_88772_-,NA|89aa|down_9|NZ_CP019027.1_89940_90207_-	NA|368aa|up_9|NZ_CP019027.1_70742_71846_-	pfam00303, Thymidylat_synt, Thymidylate synthase	NA|290aa|up_8|NZ_CP019027.1_72017_72887_-	pfam01503, PRA-PH, Phosphoribosyl-ATP pyrophosphohydrolase	NA|381aa|up_7|NZ_CP019027.1_72964_74107_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|772aa|up_6|NZ_CP019027.1_74212_76528_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|190aa|up_5|NZ_CP019027.1_76601_77171_-	NA	NA|248aa|up_4|NZ_CP019027.1_77180_77924_-	NA	NA|639aa|up_3|NZ_CP019027.1_77913_79830_-	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	NA|362aa|up_2|NZ_CP019027.1_80059_81145_-	COG0420, SbcD, DNA repair exonuclease [DNA replication, recombination, and repair]	NA|215aa|up_1|NZ_CP019027.1_81399_82044_-	NA	NA|405aa|up_0|NZ_CP019027.1_82245_83460_+	NA	NA|71aa|down_0|NZ_CP019027.1_84039_84252_-	NA	NA|112aa|down_1|NZ_CP019027.1_84251_84587_-	NA	NA|92aa|down_2|NZ_CP019027.1_84802_85078_-	NA	NA|142aa|down_3|NZ_CP019027.1_85133_85559_-	PHA02053, PHA02053, hypothetical protein	NA|130aa|down_4|NZ_CP019027.1_85621_86011_-	NA	NA|247aa|down_5|NZ_CP019027.1_86031_86772_-	NA	NA|275aa|down_6|NZ_CP019027.1_86817_87642_-	pfam18406, DUF1281_C, Ferredoxin-like domain in Api92-like protein	NA|277aa|down_7|NZ_CP019027.1_87737_88568_-	pfam01145, Band_7, SPFH domain / Band 7 family	NA|67aa|down_8|NZ_CP019027.1_88571_88772_-	NA	NA|89aa|down_9|NZ_CP019027.1_89940_90207_-	NA
