assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002012005.1_ASM201200v1	NZ_CP018965	Escherichia coli strain Ecol_517 chromosome, complete genome	1	326774-326927	1	CRISPRCasFinder	no		DEDDh,cas3,RT,csa3,PD-DExK,WYL,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG	Orphan	CGCCTTATCCGGCCTACCGATCCAGCACAGGTTTGTAGGCATGATAAGACGCG	53	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,RT,csa3,PD-DExK,WYL,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG	NA,NA|150aa|down_8|NZ_CP018965.1_336504_336954_-	NA|134aa|up_9|NZ_CP018965.1_317693_318095_-	PRK10984, PRK10984, sigma factor-binding protein Crl	NA|415aa|up_8|NZ_CP018965.1_318152_319397_-	PRK05077, frsA, esterase FrsA	NA|153aa|up_7|NZ_CP018965.1_319488_319947_-	PRK09177, PRK09177, xanthine-guanine phosphoribosyltransferase; Validated	NA|486aa|up_6|NZ_CP018965.1_320207_321665_+	PRK15026, PRK15026, aminoacyl-histidine dipeptidase; Provisional	NA|47aa|up_5|NZ_CP018965.1_321721_321862_-	PRK08179, prfH, peptide chain release factor-like protein; Reviewed	NA|89aa|up_4|NZ_CP018965.1_322021_322288_-	PRK09588, PRK09588, hypothetical protein; Reviewed	NA|151aa|up_3|NZ_CP018965.1_322594_323047_-	PRK09831, PRK09831, GNAT family N-acetyltransferase	NA|352aa|up_2|NZ_CP018965.1_323043_324099_-	PRK02406, PRK02406, DNA polymerase IV; Validated	NA|262aa|up_1|NZ_CP018965.1_324169_324955_-	PRK06778, PRK06778, hypothetical protein; Validated	NA|580aa|up_0|NZ_CP018965.1_324899_326639_+	COG1298, FlhA, Flagellar biosynthesis pathway, component FlhA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|166aa|down_0|NZ_CP018965.1_326956_327454_-	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|250aa|down_1|NZ_CP018965.1_327629_328379_-	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane]	NA|247aa|down_2|NZ_CP018965.1_328679_329420_+	COG3034, COG3034, Uncharacterized protein conserved in bacteria [Function unknown]	NA|256aa|down_3|NZ_CP018965.1_329390_330158_-	pfam13230, GATase_4, Glutamine amidotransferases class-II	NA|193aa|down_4|NZ_CP018965.1_330363_330942_-	PRK00414, gmhA, D-sedoheptulose 7-phosphate isomerase	NA|815aa|down_5|NZ_CP018965.1_331181_333626_+	PRK09463, fadE, acyl-CoA dehydrogenase; Reviewed	NA|158aa|down_6|NZ_CP018965.1_333668_334142_-	PRK09993, PRK09993, C-lysozyme inhibitor; Provisional	NA|257aa|down_7|NZ_CP018965.1_334295_335066_+	PRK10438, PRK10438, C-N hydrolase family amidase; Provisional	NA|150aa|down_8|NZ_CP018965.1_336504_336954_-	NA	NA|451aa|down_9|NZ_CP018965.1_341866_343219_+	COG3515, COG3515, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and    vesicular transport]
GCF_002012005.1_ASM201200v1	NZ_CP018965	Escherichia coli strain Ecol_517 chromosome, complete genome	2	517720-517835	2	CRISPRCasFinder	no		DEDDh,cas3,RT,csa3,PD-DExK,WYL,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG	Orphan	AACGCCTGATGCGACGCTGACGCGTCTTATC	31	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,RT,csa3,PD-DExK,WYL,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG	NA,NA	NA|393aa|up_9|NZ_CP018965.1_505735_506914_-	TIGR00899, Sugar_efflux_transporter_A, sugar efflux transporter	NA|44aa|up_8|NZ_CP018965.1_507015_507147_-	pfam15894, SgrT, Inhibitor of glucose uptake transporter SgrT	NA|552aa|up_7|NZ_CP018965.1_507235_508891_+	PRK13626, PRK13626, HTH-type transcriptional regulator SgrR	NA|328aa|up_6|NZ_CP018965.1_509054_510038_+	PRK11205, tbpA, thiamine transporter substrate binding subunit; Provisional	NA|537aa|up_5|NZ_CP018965.1_510013_511624_+	PRK09433, thiP, thiamine transporter membrane protein; Reviewed	NA|233aa|up_4|NZ_CP018965.1_511607_512306_+	PRK10771, thiQ, thiamine ABC transporter ATP-binding protein ThiQ	NA|255aa|up_3|NZ_CP018965.1_512419_513184_-	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|293aa|up_2|NZ_CP018965.1_513269_514148_-	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC	NA|567aa|up_1|NZ_CP018965.1_514486_516187_+	PRK04123, PRK04123, ribulokinase; Provisional	NA|501aa|up_0|NZ_CP018965.1_516197_517700_+	PRK02929, PRK02929, L-arabinose isomerase; Provisional	NA|232aa|down_0|NZ_CP018965.1_517899_518595_+	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD	NA|784aa|down_1|NZ_CP018965.1_518669_521021_+	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|969aa|down_2|NZ_CP018965.1_521185_524092_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|220aa|down_3|NZ_CP018965.1_524103_524763_+	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|272aa|down_4|NZ_CP018965.1_524879_525695_-	PRK09430, djlA, co-chaperone DjlA	NA|785aa|down_5|NZ_CP018965.1_525949_528304_+	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional	NA|429aa|down_6|NZ_CP018965.1_528356_529643_+	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional	NA|330aa|down_7|NZ_CP018965.1_529642_530632_+	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed	NA|274aa|down_8|NZ_CP018965.1_530628_531450_+	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA	NA|126aa|down_9|NZ_CP018965.1_531452_531830_+	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed
GCF_002012005.1_ASM201200v1	NZ_CP018965	Escherichia coli strain Ecol_517 chromosome, complete genome	3	1999220-1999359	3	CRISPRCasFinder	no		DEDDh,cas3,RT,csa3,PD-DExK,WYL,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG	Orphan	TTTGTATCGTTGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCA	49	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,RT,csa3,PD-DExK,WYL,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG	NA,NA	NA|336aa|up_9|NZ_CP018965.1_1991685_1992693_-	PRK10508, PRK10508, luciferase-like monooxygenase	NA|293aa|up_8|NZ_CP018965.1_1992898_1993777_-	PRK15447, PRK15447, putative protease; Provisional	NA|332aa|up_7|NZ_CP018965.1_1993785_1994781_-	COG0826, COG0826, Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]	NA|175aa|up_6|NZ_CP018965.1_1994989_1995514_+	COG3154, COG3154, Putative lipid carrier protein [Lipid metabolism]	NA|168aa|up_5|NZ_CP018965.1_1995507_1996011_+	COG3153, COG3153, Predicted acetyltransferase [General function prediction only]	NA|101aa|up_4|NZ_CP018965.1_1995997_1996300_-	PRK00329, PRK00329, GIY-YIG nuclease superfamily protein; Validated	NA|148aa|up_3|NZ_CP018965.1_1996350_1996794_+	PRK03467, PRK03467, hypothetical protein; Provisional	NA|173aa|up_2|NZ_CP018965.1_1996773_1997292_-	cd03134, GATase1_PfpI_like, A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus	NA|212aa|up_1|NZ_CP018965.1_1997419_1998055_+	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs	NA|347aa|up_0|NZ_CP018965.1_1998127_1999168_+	COG0701, COG0701, Predicted permeases [General function prediction only]	NA|192aa|down_0|NZ_CP018965.1_1999372_1999948_-	PRK11023, PRK11023, divisome-associated lipoprotein YraP	NA|197aa|down_1|NZ_CP018965.1_1999957_2000548_-	PRK10886, PRK10886, DnaA initiator-associating protein DiaA; Provisional	NA|132aa|down_2|NZ_CP018965.1_2000567_2000963_-	TIGR00252, UPF0102_protein_HI_1656, TIGR00252 family protein	NA|679aa|down_3|NZ_CP018965.1_2000920_2002957_-	COG3107, LppC, Putative lipoprotein [General function prediction only]	NA|287aa|down_4|NZ_CP018965.1_2003021_2003882_+	PRK14994, PRK14994, SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase; Provisional	NA|364aa|down_5|NZ_CP018965.1_2003924_2005016_-	pfam00419, Fimbrial, Fimbrial protein	NA|232aa|down_6|NZ_CP018965.1_2008349_2009045_-	COG3121, FimC, P pilus assembly protein, chaperone PapD [Cell motility and secretion / Intracellular trafficking and secretion]	NA|195aa|down_7|NZ_CP018965.1_2009124_2009709_-	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|252aa|down_8|NZ_CP018965.1_2010109_2010865_-	PRK09762, PRK09762, galactosamine-6-phosphate isomerase; Provisional	NA|264aa|down_9|NZ_CP018965.1_2010865_2011657_-	PRK09855, PRK09855, PTS N-acetylgalactosamine transporter subunit IID
GCF_002012005.1_ASM201200v1	NZ_CP018965	Escherichia coli strain Ecol_517 chromosome, complete genome	4	2044120-2044237	4	CRISPRCasFinder	no		DEDDh,cas3,RT,csa3,PD-DExK,WYL,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG	Orphan	TGCCGGATGCGATGCTGGCGCACCTTATCCGGCCTACGGG	40	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,RT,csa3,PD-DExK,WYL,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG	NA,NA|55aa|down_0|NZ_CP018965.1_2044310_2044475_-	NA|115aa|up_9|NZ_CP018965.1_2031841_2032186_-	PRK11424, PRK11424, DNA-binding transcriptional activator TdcR; Provisional	NA|313aa|up_8|NZ_CP018965.1_2032374_2033313_+	PRK10341, PRK10341, transcriptional regulator TdcA	NA|330aa|up_7|NZ_CP018965.1_2033411_2034401_+	PRK08638, PRK08638, bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB	NA|444aa|up_6|NZ_CP018965.1_2034422_2035754_+	PRK13629, PRK13629, threonine/serine transporter TdcC; Provisional	NA|403aa|up_5|NZ_CP018965.1_2035779_2036988_+	PRK12379, PRK12379, propionate kinase	NA|765aa|up_4|NZ_CP018965.1_2037021_2039316_+	cd01678, PFL1, Pyruvate formate lyase 1	NA|130aa|up_3|NZ_CP018965.1_2039329_2039719_+	PRK11401, PRK11401, enamine/imine deaminase	NA|455aa|up_2|NZ_CP018965.1_2039790_2041155_+	PRK15040, PRK15040, L-serine ammonia-lyase	NA|444aa|up_1|NZ_CP018965.1_2041429_2042761_+	TIGR00814, membrane_transport_protein_YhjV, serine transporter	NA|437aa|up_0|NZ_CP018965.1_2042788_2044099_+	COG3681, COG3681, L-cysteine desulfidase [Amino acid transport and metabolism]	NA|55aa|down_0|NZ_CP018965.1_2044310_2044475_-	NA	NA|234aa|down_1|NZ_CP018965.1_2044497_2045199_-	COG1741, COG1741, Pirin-related protein [General function prediction only]	NA|299aa|down_2|NZ_CP018965.1_2045303_2046200_+	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold	NA|119aa|down_3|NZ_CP018965.1_2046250_2046607_-	COG3152, COG3152, Predicted membrane protein [Function unknown]	NA|122aa|down_4|NZ_CP018965.1_2046848_2047214_-	COG3152, COG3152, Predicted membrane protein [Function unknown]	NA|329aa|down_5|NZ_CP018965.1_2047506_2048493_-	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]	NA|161aa|down_6|NZ_CP018965.1_2048562_2049045_-	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|100aa|down_7|NZ_CP018965.1_2049140_2049440_-	pfam13997, YqjK, YqjK-like protein	NA|135aa|down_8|NZ_CP018965.1_2049429_2049834_-	COG5393, COG5393, Predicted membrane protein [Function unknown]	NA|102aa|down_9|NZ_CP018965.1_2049836_2050142_-	COG4575, ElaB, Uncharacterized conserved protein [Function unknown]
GCF_002012005.1_ASM201200v1	NZ_CP018965	Escherichia coli strain Ecol_517 chromosome, complete genome	5	2488091-2488485	1,5,1	PILER-CR,CRISPRCasFinder,CRT	no		DEDDh,cas3,RT,csa3,PD-DExK,WYL,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG	Orphan	GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG,GAGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	0	0	NA	NA	I-E:I-E:I-E	6,6,6	6	Orphan	DEDDh,cas3,RT,csa3,PD-DExK,WYL,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG	NA|47aa|up_1|NZ_CP018965.1_2486800_2486941_-,NA	NA|434aa|up_9|NZ_CP018965.1_2477497_2478799_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_8|NZ_CP018965.1_2478846_2481081_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|83aa|up_7|NZ_CP018965.1_2481158_2481407_+	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|112aa|up_6|NZ_CP018965.1_2481406_2481742_+	PRK09907, PRK09907, endoribonuclease MazF	NA|264aa|up_5|NZ_CP018965.1_2481812_2482604_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_4|NZ_CP018965.1_2482831_2484469_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_3|NZ_CP018965.1_2484556_2485855_+	PRK00077, eno, enolase; Provisional	NA|291aa|up_2|NZ_CP018965.1_2485914_2486787_-	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|47aa|up_1|NZ_CP018965.1_2486800_2486941_-	NA	NA|224aa|up_0|NZ_CP018965.1_2487079_2487751_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|426aa|down_0|NZ_CP018965.1_2490626_2491904_-	cd06174, MFS, Major Facilitator Superfamily	NA|262aa|down_1|NZ_CP018965.1_2492222_2493008_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|485aa|down_2|NZ_CP018965.1_2493077_2494532_+	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|470aa|down_3|NZ_CP018965.1_2494553_2495963_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|260aa|down_4|NZ_CP018965.1_2495940_2496720_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|287aa|down_5|NZ_CP018965.1_2496716_2497577_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|192aa|down_6|NZ_CP018965.1_2497724_2498300_-	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|87aa|down_7|NZ_CP018965.1_2498316_2498577_-	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|424aa|down_8|NZ_CP018965.1_2498567_2499839_-	PRK10015, PRK10015, oxidoreductase; Provisional	NA|121aa|down_9|NZ_CP018965.1_2499916_2500279_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)
GCF_002012005.1_ASM201200v1	NZ_CP018965	Escherichia coli strain Ecol_517 chromosome, complete genome	6	2510869-2511508	6,2,2	CRISPRCasFinder,PILER-CR,CRT	no	cas5,cas6e,cas1,cas2	DEDDh,cas3,RT,csa3,PD-DExK,WYL,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG	Unclear	TGTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	30,29,29	0	0	NA	NA	I-E:I-E:I-E	9,9,10	10	Unclear	DEDDh,cas3,RT,csa3,PD-DExK,WYL,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG	NA,NA	NA|424aa|up_9|NZ_CP018965.1_2498567_2499839_-	PRK10015, PRK10015, oxidoreductase; Provisional	NA|121aa|up_8|NZ_CP018965.1_2499916_2500279_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|up_7|NZ_CP018965.1_2500597_2502397_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|up_6|NZ_CP018965.1_2502396_2504109_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_5|NZ_CP018965.1_2504182_2504917_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|51aa|up_4|NZ_CP018965.1_2505181_2505334_+	pfam01848, HOK_GEF, Hok/gef family	cas5|249aa|up_3|NZ_CP018965.1_2508184_2508931_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|217aa|up_2|NZ_CP018965.1_2508912_2509563_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas1|308aa|up_1|NZ_CP018965.1_2509559_2510483_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NZ_CP018965.1_2510479_2510773_+	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	NA|346aa|down_0|NZ_CP018965.1_2511528_2512566_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|NZ_CP018965.1_2512817_2513726_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|476aa|down_2|NZ_CP018965.1_2513727_2515155_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|NZ_CP018965.1_2515154_2515760_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|NZ_CP018965.1_2515809_2516133_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|NZ_CP018965.1_2516326_2516638_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|NZ_CP018965.1_2516656_2517367_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|NZ_CP018965.1_2517366_2517846_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|NZ_CP018965.1_2517842_2518892_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|NZ_CP018965.1_2518872_2519634_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCF_002012005.1_ASM201200v1	NZ_CP018965	Escherichia coli strain Ecol_517 chromosome, complete genome	7	3012770-3012887	7	CRISPRCasFinder	no		DEDDh,cas3,RT,csa3,PD-DExK,WYL,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG	Orphan	CCGAGCCGTAGGCCGGATAAGGCGTTCACGC	31	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,RT,csa3,PD-DExK,WYL,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG	NA|105aa|up_3|NZ_CP018965.1_3007850_3008165_-,NA	NA|300aa|up_9|NZ_CP018965.1_2999763_3000663_-	PRK09956, PRK09956, ISNCY family transposase	NA|397aa|up_8|NZ_CP018965.1_3000855_3002046_-	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit	NA|420aa|up_7|NZ_CP018965.1_3002042_3003302_-	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism]	NA|543aa|up_6|NZ_CP018965.1_3003291_3004920_-	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A	NA|453aa|up_5|NZ_CP018965.1_3005192_3006551_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|359aa|up_4|NZ_CP018965.1_3006555_3007632_+	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional	NA|105aa|up_3|NZ_CP018965.1_3007850_3008165_-	NA	NA|217aa|up_2|NZ_CP018965.1_3010584_3011235_+	PRK09902, PRK09902, lipopolysaccharide kinase InaA	NA|85aa|up_1|NZ_CP018965.1_3011288_3011543_-	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein	NA|377aa|up_0|NZ_CP018965.1_3011542_3012673_-	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed	NA|762aa|down_0|NZ_CP018965.1_3012906_3015192_-	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha	NA|1251aa|down_1|NZ_CP018965.1_3015887_3019640_+	PRK09752, PRK09752, AIDA-I family autotransporter YfaL	NA|241aa|down_2|NZ_CP018965.1_3019767_3020490_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|876aa|down_3|NZ_CP018965.1_3020636_3023264_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|563aa|down_4|NZ_CP018965.1_3023412_3025101_+	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown]	NA|208aa|down_5|NZ_CP018965.1_3025097_3025721_+	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1465aa|down_6|NZ_CP018965.1_3025864_3030259_+	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only]	NA|550aa|down_7|NZ_CP018965.1_3030259_3031909_+	COG5445, COG5445, Predicted secreted protein [Function unknown]	NA|259aa|down_8|NZ_CP018965.1_3031913_3032690_+	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown]	NA|395aa|down_9|NZ_CP018965.1_3032763_3033948_-	PRK05790, PRK05790, putative acyltransferase; Provisional
GCF_002012005.1_ASM201200v1	NZ_CP018965	Escherichia coli strain Ecol_517 chromosome, complete genome	8	3663893-3664016	8	CRISPRCasFinder	no	DEDDh	DEDDh,cas3,RT,csa3,PD-DExK,WYL,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG	Unclear	CGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTA	43	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,RT,csa3,PD-DExK,WYL,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG	NA,NA|30aa|down_7|NZ_CP018965.1_3672912_3673002_+	NA|471aa|up_9|NZ_CP018965.1_3653347_3654760_-	PRK09206, PRK09206, pyruvate kinase PykF	NA|70aa|up_8|NZ_CP018965.1_3655315_3655525_+	PRK10292, PRK10292, fumarate hydratase FumD	NA|209aa|up_7|NZ_CP018965.1_3655980_3656607_+	PRK09898, PRK09898, ferredoxin-like protein	NA|701aa|up_6|NZ_CP018965.1_3656627_3658730_+	PRK09849, PRK09849, putative oxidoreductase; Provisional	NA|213aa|up_5|NZ_CP018965.1_3658742_3659381_+	PRK09947, PRK09947, YdhW family putative oxidoreductase system protein	NA|223aa|up_4|NZ_CP018965.1_3659444_3660113_+	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein	NA|262aa|up_3|NZ_CP018965.1_3660109_3660895_+	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional	NA|271aa|up_2|NZ_CP018965.1_3660898_3661711_+	PRK09946, PRK09946, hypothetical protein; Provisional	NA|535aa|up_1|NZ_CP018965.1_3661722_3663327_-	PRK09897, PRK09897, FAD-NAD(P)-binding protein	NA|102aa|up_0|NZ_CP018965.1_3663452_3663758_-	PRK11118, PRK11118, putative monooxygenase; Provisional	NA|419aa|down_0|NZ_CP018965.1_3664330_3665587_+	PRK09945, PRK09945, hypothetical protein; Provisional	NA|458aa|down_1|NZ_CP018965.1_3665627_3667001_-	PRK01766, PRK01766, multidrug efflux protein; Reviewed	NA|214aa|down_2|NZ_CP018965.1_3667215_3667857_+	PRK13020, PRK13020, riboflavin synthase subunit alpha; Provisional	NA|383aa|down_3|NZ_CP018965.1_3667896_3669045_-	PRK11705, PRK11705, cyclopropane fatty acyl phospholipid synthase	NA|404aa|down_4|NZ_CP018965.1_3669335_3670547_-	PRK11043, PRK11043, Bcr/CflA family multidrug efflux MFS transporter	NA|311aa|down_5|NZ_CP018965.1_3670659_3671592_+	PRK11074, PRK11074, putative DNA-binding transcriptional regulator; Provisional	NA|342aa|down_6|NZ_CP018965.1_3671588_3672614_-	PRK10703, PRK10703, HTH-type transcriptional repressor PurR	NA|30aa|down_7|NZ_CP018965.1_3672912_3673002_+	NA	NA|390aa|down_8|NZ_CP018965.1_3673167_3674337_+	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|194aa|down_9|NZ_CP018965.1_3674482_3675064_-	PRK10543, PRK10543, superoxide dismutase [Fe]
GCF_002012005.1_ASM201200v1	NZ_CP018965	Escherichia coli strain Ecol_517 chromosome, complete genome	9	4318706-4318797	9	CRISPRCasFinder	no		DEDDh,cas3,RT,csa3,PD-DExK,WYL,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG	Orphan	CCACCTTTTTTACCTGCTTCAGATGC	26	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,RT,csa3,PD-DExK,WYL,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG	NA,NA	NA|503aa|up_9|NZ_CP018965.1_4306290_4307799_-	PRK15419, PRK15419, sodium/proline symporter PutP	NA|1321aa|up_8|NZ_CP018965.1_4308220_4312183_+	PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed	NA|213aa|up_7|NZ_CP018965.1_4312222_4312861_-	PRK15008, PRK15008, HTH-type transcriptional regulator RutR; Provisional	NA|364aa|up_6|NZ_CP018965.1_4313148_4314240_+	TIGR03612, RutA, pyrimidine utilization protein A	NA|231aa|up_5|NZ_CP018965.1_4314239_4314932_+	TIGR03614, RutB, pyrimidine utilization protein B	NA|129aa|up_4|NZ_CP018965.1_4314943_4315330_+	TIGR03610, RutC, pyrimidine utilization protein C	NA|267aa|up_3|NZ_CP018965.1_4315337_4316138_+	TIGR03611, RutD, pyrimidine utilization protein D	NA|197aa|up_2|NZ_CP018965.1_4316147_4316738_+	PRK05365, PRK05365, malonic semialdehyde reductase; Provisional	NA|165aa|up_1|NZ_CP018965.1_4316748_4317243_+	TIGR03615, flavoprotein_oxidoreductase, pyrimidine utilization flavin reductase protein F	NA|443aa|up_0|NZ_CP018965.1_4317263_4318592_+	TIGR03616, Putative_pyrimidine_permease_RutG, pyrimidine utilization transport protein G	NA|199aa|down_0|NZ_CP018965.1_4319220_4319817_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|76aa|down_1|NZ_CP018965.1_4319837_4320065_+	PRK10174, PRK10174, hypothetical protein; Provisional	NA|414aa|down_2|NZ_CP018965.1_4320102_4321344_-	PRK10173, PRK10173, glucose-1-phosphatase/inositol phosphatase; Provisional	NA|420aa|down_3|NZ_CP018965.1_4321635_4322895_-	PRK09784, PRK09784, YccE family protein	NA|307aa|down_4|NZ_CP018965.1_4323154_4324075_+	PRK10266, PRK10266, curved DNA-binding protein	NA|102aa|down_5|NZ_CP018965.1_4324074_4324380_+	PRK10265, PRK10265, chaperone modulator CbpM	NA|200aa|down_6|NZ_CP018965.1_4324472_4325072_-	PRK04976, torD, chaperone protein TorD; Validated	NA|849aa|down_7|NZ_CP018965.1_4325068_4327615_-	PRK15102, PRK15102, trimethylamine-N-oxide reductase TorA	NA|391aa|down_8|NZ_CP018965.1_4327614_4328787_-	PRK15032, PRK15032, pentaheme c-type cytochrome TorC	NA|231aa|down_9|NZ_CP018965.1_4328916_4329609_+	PRK10766, PRK10766, two-component system response regulator TorR
GCF_002012005.1_ASM201200v1	NZ_CP018965	Escherichia coli strain Ecol_517 chromosome, complete genome	10	4624810-4624954	10	CRISPRCasFinder	no		DEDDh,cas3,RT,csa3,PD-DExK,WYL,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG	Orphan	GTAGGTCGGATAAGATGCGCAAGCATCGCATCCGACAATAAGTGCCGGATGC	52	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,RT,csa3,PD-DExK,WYL,cas5,cas6e,cas1,cas2,c2c9_V-U4,DinG	NA|94aa|up_6|NZ_CP018965.1_4620195_4620477_+,NA|201aa|up_4|NZ_CP018965.1_4621007_4621610_-,NA|56aa|up_3|NZ_CP018965.1_4621852_4622020_+,NA	NA|227aa|up_9|NZ_CP018965.1_4619161_4619842_+	pfam09588, YqaJ, YqaJ-like viral recombinase domain	NA|61aa|up_8|NZ_CP018965.1_4619838_4620021_+	pfam07026, DUF1317, Protein of unknown function (DUF1317)	NA|64aa|up_7|NZ_CP018965.1_4619993_4620185_+	pfam07131, DUF1382, Protein of unknown function (DUF1382)	NA|94aa|up_6|NZ_CP018965.1_4620195_4620477_+	NA	NA|74aa|up_5|NZ_CP018965.1_4620575_4620797_+	PHA00080, PHA00080, DksA-like zinc finger domain containing protein	NA|201aa|up_4|NZ_CP018965.1_4621007_4621610_-	NA	NA|56aa|up_3|NZ_CP018965.1_4621852_4622020_+	NA	NA|73aa|up_2|NZ_CP018965.1_4622059_4622278_+	pfam07825, Exc, Excisionase-like protein	NA|357aa|up_1|NZ_CP018965.1_4622255_4623326_+	cd00800, INT_Lambda_C, C-terminal catalytic domain of Lambda integrase, a tyrosine-based site-specific recombinase	NA|428aa|up_0|NZ_CP018965.1_4623460_4624744_+	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase	NA|754aa|down_0|NZ_CP018965.1_4624977_4627239_-	PRK11413, PRK11413, putative hydratase; Provisional	NA|478aa|down_1|NZ_CP018965.1_4627421_4628855_-	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region	NA|351aa|down_2|NZ_CP018965.1_4628930_4629983_-	NF033377, OMA_tautomer, 4-oxalomesaconate tautomerase	NA|318aa|down_3|NZ_CP018965.1_4630166_4631120_+	cd08440, PBP2_LTTR_like_4, TThe C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|332aa|down_4|NZ_CP018965.1_4631160_4632156_-	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional	NA|273aa|down_5|NZ_CP018965.1_4632310_4633129_+	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional	NA|353aa|down_6|NZ_CP018965.1_4633129_4634188_-	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC	NA|230aa|down_7|NZ_CP018965.1_4634190_4634880_-	PRK09421, modB, molybdate ABC transporter permease subunit	NA|258aa|down_8|NZ_CP018965.1_4634879_4635653_-	PRK10677, modA, molybdate transporter periplasmic protein; Provisional	NA|50aa|down_9|NZ_CP018965.1_4635819_4635969_-	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ
