assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_002005185.1_ASM200518v1	NZ_CP019721	Veillonella parvula strain UTDB1-3 chromosome, complete genome	1	309077-309182	1	CRISPRCasFinder	no		WYL,DEDDh,csa3,cas6,csm3gr7,csx19,csx10gr5,cas10,csx20,cas1,cas2,csx1,cas3	Orphan	CCCCTGTGTTGATGTAACTATGGTTAGTCGCAT	33	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,csa3,cas6,csm3gr7,csx19,csx10gr5,cas10,csx20,cas1,cas2,csx1,cas3	NA|131aa|up_1|NZ_CP019721.1_307974_308367_-,NA|184aa|up_0|NZ_CP019721.1_308359_308911_-,NA|109aa|down_0|NZ_CP019721.1_310009_310336_-,NA|333aa|down_1|NZ_CP019721.1_310351_311350_-,NA|102aa|down_2|NZ_CP019721.1_311336_311642_-,NA|62aa|down_7|NZ_CP019721.1_320040_320226_-,NA|93aa|down_8|NZ_CP019721.1_320369_320648_-,NA|321aa|down_9|NZ_CP019721.1_320659_321622_-	NA|372aa|up_9|NZ_CP019721.1_301583_302699_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|284aa|up_8|NZ_CP019721.1_302810_303662_+	cd19133, AKR_AKR5F1, the AKR5F family of aldo-keto reductase (AKR)	NA|113aa|up_7|NZ_CP019721.1_303764_304103_-	COG1687, AzlD, Predicted branched-chain amino acid permeases (azaleucine resistance) [Amino acid transport and metabolism]	NA|222aa|up_6|NZ_CP019721.1_304095_304761_-	TIGR00346, Uncharacterized_membrane_protein_HI_1738, 4-azaleucine resistance probable transporter AzlC	NA|389aa|up_5|NZ_CP019721.1_304861_306028_-	COG1979, COG1979, Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family [Energy production and conversion]	NA|80aa|up_4|NZ_CP019721.1_306180_306420_-	pfam17443, pXO2-72, Uncharacterized protein pXO2-72	NA|209aa|up_3|NZ_CP019721.1_306857_307484_-	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|192aa|up_2|NZ_CP019721.1_307398_307974_-	pfam01510, Amidase_2, N-acetylmuramoyl-L-alanine amidase	NA|131aa|up_1|NZ_CP019721.1_307974_308367_-	NA	NA|184aa|up_0|NZ_CP019721.1_308359_308911_-	NA	NA|109aa|down_0|NZ_CP019721.1_310009_310336_-	NA	NA|333aa|down_1|NZ_CP019721.1_310351_311350_-	NA	NA|102aa|down_2|NZ_CP019721.1_311336_311642_-	NA	NA|1317aa|down_3|NZ_CP019721.1_311650_315601_-	COG4733, COG4733, Phage-related protein, tail component [Function unknown]	NA|109aa|down_4|NZ_CP019721.1_315604_315931_-	pfam00877, NLPC_P60, NlpC/P60 family	NA|202aa|down_5|NZ_CP019721.1_315914_316520_-	COG4672, gp18, Phage-related protein [Function unknown]	NA|1065aa|down_6|NZ_CP019721.1_316856_320051_-	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|62aa|down_7|NZ_CP019721.1_320040_320226_-	NA	NA|93aa|down_8|NZ_CP019721.1_320369_320648_-	NA	NA|321aa|down_9|NZ_CP019721.1_320659_321622_-	NA
GCF_002005185.1_ASM200518v1	NZ_CP019721	Veillonella parvula strain UTDB1-3 chromosome, complete genome	2	512612-512734	2	CRISPRCasFinder	no		WYL,DEDDh,csa3,cas6,csm3gr7,csx19,csx10gr5,cas10,csx20,cas1,cas2,csx1,cas3	Orphan	CCTATCTCTGAAAATGACTTAGCTCGCTATGGAGG	35	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,csa3,cas6,csm3gr7,csx19,csx10gr5,cas10,csx20,cas1,cas2,csx1,cas3	NA|133aa|up_4|NZ_CP019721.1_506701_507100_-,NA|148aa|down_4|NZ_CP019721.1_515701_516145_-,NA|444aa|down_5|NZ_CP019721.1_516754_518086_+,NA|192aa|down_7|NZ_CP019721.1_519277_519853_-,NA|419aa|down_8|NZ_CP019721.1_519910_521167_-,NA|419aa|down_9|NZ_CP019721.1_521989_523246_-	NA|384aa|up_9|NZ_CP019721.1_501868_503020_-	PRK10624, PRK10624, L-1,2-propanediol oxidoreductase; Provisional	NA|382aa|up_8|NZ_CP019721.1_503162_504308_-	COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism]	NA|78aa|up_7|NZ_CP019721.1_504592_504826_-	pfam04324, Fer2_BFD, BFD-like [2Fe-2S] binding domain	NA|209aa|up_6|NZ_CP019721.1_505205_505832_-	cd06158, S2P-M50_like_1, Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms	NA|257aa|up_5|NZ_CP019721.1_505841_506612_-	COG0599, COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit [Function unknown]	NA|133aa|up_4|NZ_CP019721.1_506701_507100_-	NA	NA|173aa|up_3|NZ_CP019721.1_507254_507773_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|197aa|up_2|NZ_CP019721.1_508029_508620_+	cd02136, PnbA_NfnB-like, nitroreductase similar to Mycobacterium smegmatis NfnB	NA|441aa|up_1|NZ_CP019721.1_510154_511477_+	PRK11273, glpT, glycerol-3-phosphate transporter	NA|258aa|up_0|NZ_CP019721.1_511585_512359_-	cd07544, P-type_ATPase_HM, P-type heavy metal-transporting ATPase; uncharacterized subfamily	NA|118aa|down_0|NZ_CP019721.1_512771_513125_-	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC	NA|107aa|down_1|NZ_CP019721.1_513211_513532_-	TIGR02607, Virulence-associated_protein_I, addiction module antidote protein, HigA family	NA|239aa|down_2|NZ_CP019721.1_513934_514651_-	pfam04474, DUF554, Protein of unknown function (DUF554)	NA|200aa|down_3|NZ_CP019721.1_515102_515702_-	pfam03352, Adenine_glyco, Methyladenine glycosylase	NA|148aa|down_4|NZ_CP019721.1_515701_516145_-	NA	NA|444aa|down_5|NZ_CP019721.1_516754_518086_+	NA	NA|179aa|down_6|NZ_CP019721.1_518291_518828_-	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only]	NA|192aa|down_7|NZ_CP019721.1_519277_519853_-	NA	NA|419aa|down_8|NZ_CP019721.1_519910_521167_-	NA	NA|419aa|down_9|NZ_CP019721.1_521989_523246_-	NA
GCF_002005185.1_ASM200518v1	NZ_CP019721	Veillonella parvula strain UTDB1-3 chromosome, complete genome	3	531403-532136	1,1	CRT,PILER-CR	no	cas6,csm3gr7,csx19,csx10gr5,cas10,csx20,cas1,cas2	WYL,DEDDh,csa3,cas6,csm3gr7,csx19,csx10gr5,cas10,csx20,cas1,cas2,csx1,cas3	Type III-A,Type III-C,Type III-B,Type III-D	GTTTCCGTCCCCATNAGGGGATTATTTAATTTAAC,GGGGATTATTTAATTTAAC	35,19	1	1	531672-531712	NZ_CP019721.1_1072160-1072200	NA:NA	9,9	9	TypeIII-A,TypeIII-C,TypeIII-B,TypeIII-D	WYL,DEDDh,csa3,cas6,csm3gr7,csx19,csx10gr5,cas10,csx20,cas1,cas2,csx1,cas3	NA|192aa|up_8|NZ_CP019721.1_519277_519853_-,NA|419aa|up_7|NZ_CP019721.1_519910_521167_-,NA|419aa|up_6|NZ_CP019721.1_521989_523246_-,NA|190aa|up_5|NZ_CP019721.1_523845_524415_-,NA|194aa|up_4|NZ_CP019721.1_524423_525005_-,NA|798aa|up_2|NZ_CP019721.1_527040_529434_-,NA|55aa|up_0|NZ_CP019721.1_531180_531345_+,NA|752aa|down_0|NZ_CP019721.1_533722_535978_-,NA|179aa|down_1|NZ_CP019721.1_536094_536631_-,csx10gr5|527aa|down_8|NZ_CP019721.1_543337_544918_-	NA|179aa|up_9|NZ_CP019721.1_518291_518828_-	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only]	NA|192aa|up_8|NZ_CP019721.1_519277_519853_-	NA	NA|419aa|up_7|NZ_CP019721.1_519910_521167_-	NA	NA|419aa|up_6|NZ_CP019721.1_521989_523246_-	NA	NA|190aa|up_5|NZ_CP019721.1_523845_524415_-	NA	NA|194aa|up_4|NZ_CP019721.1_524423_525005_-	NA	NA|473aa|up_3|NZ_CP019721.1_525278_526697_+	cd10322, SLC5sbd, Solute carrier 5 family, sodium/glucose transporters and related proteins; solute-binding domain	NA|798aa|up_2|NZ_CP019721.1_527040_529434_-	NA	NA|435aa|up_1|NZ_CP019721.1_529870_531175_+	PRK11017, codB, cytosine permease; Provisional	NA|55aa|up_0|NZ_CP019721.1_531180_531345_+	NA	NA|752aa|down_0|NZ_CP019721.1_533722_535978_-	NA	NA|179aa|down_1|NZ_CP019721.1_536094_536631_-	NA	NA|332aa|down_2|NZ_CP019721.1_536657_537653_-	pfam02481, DNA_processg_A, DNA recombination-mediator protein A	NA|225aa|down_3|NZ_CP019721.1_537606_538281_-	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only]	cas6|268aa|down_4|NZ_CP019721.1_538619_539423_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm3gr7|670aa|down_5|NZ_CP019721.1_539422_541432_-	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein	csx19|188aa|down_6|NZ_CP019721.1_541433_541997_-	TIGR03984, hypothetical_protein_FrEUN1fDRAFT_5778, CRISPR-associated protein, TIGR03984 family	csm3gr7|445aa|down_7|NZ_CP019721.1_541989_543324_-	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein	csx10gr5|527aa|down_8|NZ_CP019721.1_543337_544918_-	NA	csm3gr7|216aa|down_9|NZ_CP019721.1_544905_545553_-	pfam03787, RAMPs, RAMP superfamily
GCF_002005185.1_ASM200518v1	NZ_CP019721	Veillonella parvula strain UTDB1-3 chromosome, complete genome	4	532384-533286	3,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas6,csm3gr7,csx19,csx10gr5,cas10,csx20,cas1,cas2	WYL,DEDDh,csa3,cas6,csm3gr7,csx19,csx10gr5,cas10,csx20,cas1,cas2,csx1,cas3	Type III-A,Type III-C,Type III-B,Type III-D	GTTTCAATACCGTAAACGGTAAGCACTGTTGCAAC,GTTTCAATACCGTAAACGGTAAGCACTGTTGCAAC,GTTTCAATACCGTAAACGGTAAGCACTGTTGCAAC	35,35,35	0	0	NA	NA	NA:NA:NA	12,11,10	12	TypeIII-A,TypeIII-C,TypeIII-B,TypeIII-D	WYL,DEDDh,csa3,cas6,csm3gr7,csx19,csx10gr5,cas10,csx20,cas1,cas2,csx1,cas3	NA|192aa|up_8|NZ_CP019721.1_519277_519853_-,NA|419aa|up_7|NZ_CP019721.1_519910_521167_-,NA|419aa|up_6|NZ_CP019721.1_521989_523246_-,NA|190aa|up_5|NZ_CP019721.1_523845_524415_-,NA|194aa|up_4|NZ_CP019721.1_524423_525005_-,NA|798aa|up_2|NZ_CP019721.1_527040_529434_-,NA|55aa|up_0|NZ_CP019721.1_531180_531345_+,NA|752aa|down_0|NZ_CP019721.1_533722_535978_-,NA|179aa|down_1|NZ_CP019721.1_536094_536631_-,csx10gr5|527aa|down_8|NZ_CP019721.1_543337_544918_-	NA|179aa|up_9|NZ_CP019721.1_518291_518828_-	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only]	NA|192aa|up_8|NZ_CP019721.1_519277_519853_-	NA	NA|419aa|up_7|NZ_CP019721.1_519910_521167_-	NA	NA|419aa|up_6|NZ_CP019721.1_521989_523246_-	NA	NA|190aa|up_5|NZ_CP019721.1_523845_524415_-	NA	NA|194aa|up_4|NZ_CP019721.1_524423_525005_-	NA	NA|473aa|up_3|NZ_CP019721.1_525278_526697_+	cd10322, SLC5sbd, Solute carrier 5 family, sodium/glucose transporters and related proteins; solute-binding domain	NA|798aa|up_2|NZ_CP019721.1_527040_529434_-	NA	NA|435aa|up_1|NZ_CP019721.1_529870_531175_+	PRK11017, codB, cytosine permease; Provisional	NA|55aa|up_0|NZ_CP019721.1_531180_531345_+	NA	NA|752aa|down_0|NZ_CP019721.1_533722_535978_-	NA	NA|179aa|down_1|NZ_CP019721.1_536094_536631_-	NA	NA|332aa|down_2|NZ_CP019721.1_536657_537653_-	pfam02481, DNA_processg_A, DNA recombination-mediator protein A	NA|225aa|down_3|NZ_CP019721.1_537606_538281_-	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only]	cas6|268aa|down_4|NZ_CP019721.1_538619_539423_-	COG5551, COG5551, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm3gr7|670aa|down_5|NZ_CP019721.1_539422_541432_-	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein	csx19|188aa|down_6|NZ_CP019721.1_541433_541997_-	TIGR03984, hypothetical_protein_FrEUN1fDRAFT_5778, CRISPR-associated protein, TIGR03984 family	csm3gr7|445aa|down_7|NZ_CP019721.1_541989_543324_-	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein	csx10gr5|527aa|down_8|NZ_CP019721.1_543337_544918_-	NA	csm3gr7|216aa|down_9|NZ_CP019721.1_544905_545553_-	pfam03787, RAMPs, RAMP superfamily
GCF_002005185.1_ASM200518v1	NZ_CP019721	Veillonella parvula strain UTDB1-3 chromosome, complete genome	5	549989-551458	4,3,3	CRISPRCasFinder,CRT,PILER-CR	no	cas6,csm3gr7,csx19,csx10gr5,cas10,csx20,cas1,cas2,csx1	WYL,DEDDh,csa3,cas6,csm3gr7,csx19,csx10gr5,cas10,csx20,cas1,cas2,csx1,cas3	Type III-A,Type III-C,Type III-B,Type III-D	GTTTCAATACCGTAAACGGTAAGAGCTGTTGCAAC,GTTTCAATACCGTAAACGGTAAGAGCTGTTGCAAC,GTTTCAATACCGTAAACGGTAAGAGCTGTTGCAAC	35,35,35	0	0	NA	NA	NA:NA:NA	19,17,14	19	TypeIII-A,TypeIII-C,TypeIII-B,TypeIII-D	WYL,DEDDh,csa3,cas6,csm3gr7,csx19,csx10gr5,cas10,csx20,cas1,cas2,csx1,cas3	csx10gr5|527aa|up_6|NZ_CP019721.1_543337_544918_-,csx20|122aa|up_3|NZ_CP019721.1_547187_547553_-,NA|67aa|down_0|NZ_CP019721.1_552642_552843_-,csx1|673aa|down_1|NZ_CP019721.1_555023_557042_+,NA|203aa|down_5|NZ_CP019721.1_566631_567240_-	csm3gr7|670aa|up_9|NZ_CP019721.1_539422_541432_-	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein	csx19|188aa|up_8|NZ_CP019721.1_541433_541997_-	TIGR03984, hypothetical_protein_FrEUN1fDRAFT_5778, CRISPR-associated protein, TIGR03984 family	csm3gr7|445aa|up_7|NZ_CP019721.1_541989_543324_-	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein	csx10gr5|527aa|up_6|NZ_CP019721.1_543337_544918_-	NA	csm3gr7|216aa|up_5|NZ_CP019721.1_544905_545553_-	pfam03787, RAMPs, RAMP superfamily	cas10|534aa|up_4|NZ_CP019721.1_545555_547157_-	TIGR02578, CRISPR-associated_protein_Cas10/Csm1, CRISPR-associated protein Cas10/Csm1, subtype III-A/MTUBE	csx20|122aa|up_3|NZ_CP019721.1_547187_547553_-	NA	cas1|333aa|up_2|NZ_CP019721.1_547745_548744_-	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	cas2|93aa|up_1|NZ_CP019721.1_548758_549037_-	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	NA|140aa|up_0|NZ_CP019721.1_549148_549568_-	pfam05656, DUF805, Protein of unknown function (DUF805)	NA|67aa|down_0|NZ_CP019721.1_552642_552843_-	NA	csx1|673aa|down_1|NZ_CP019721.1_555023_557042_+	NA	csx1|715aa|down_2|NZ_CP019721.1_557102_559247_-	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family	NA|799aa|down_3|NZ_CP019721.1_559388_561785_+	pfam13280, WYL, WYL domain	cas6|257aa|down_4|NZ_CP019721.1_563955_564726_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|203aa|down_5|NZ_CP019721.1_566631_567240_-	NA	NA|289aa|down_6|NZ_CP019721.1_567559_568426_-	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|355aa|down_7|NZ_CP019721.1_568716_569781_-	pfam13191, AAA_16, AAA ATPase domain	NA|383aa|down_8|NZ_CP019721.1_570256_571405_-	pfam00933, Glyco_hydro_3, Glycosyl hydrolase family 3 N terminal domain	NA|477aa|down_9|NZ_CP019721.1_571818_573249_-	TIGR02512, Periplasmic_hydrogenase_large_subunit, [FeFe] hydrogenase, group A
GCF_002005185.1_ASM200518v1	NZ_CP019721	Veillonella parvula strain UTDB1-3 chromosome, complete genome	6	552738-554211	5,4,4,5,5	CRISPRCasFinder,CRT,PILER-CR,CRT,PILER-CR	no	cas6,csm3gr7,csx19,csx10gr5,cas10,csx20,cas1,cas2,csx1	WYL,DEDDh,csa3,cas6,csm3gr7,csx19,csx10gr5,cas10,csx20,cas1,cas2,csx1,cas3	Type III-A,Type III-C,Type III-B,Type III-D	GTTTCAATACCGTAAACGGTAAGAGCTGTTGCAAC,GTTTCAATACCGTAAACGGTANGTACTGTTGCAAC,AGTTTCAATACCGTAAACGGTAAGTACTGTTGCAACT,GTTTCAATACCGTAAACGGTAAGTACTGTTGCAAC,GTTTCAATACCGTAAACGGTAAGTACTGTTGCAAC	35,35,37,35,35	1	1	553066-553152	NZ_CP019721.1_552651-552737	NA:NA:NA:NA:NA	19,18,15,18,15	19	TypeIII-A,TypeIII-C,TypeIII-B,TypeIII-D	WYL,DEDDh,csa3,cas6,csm3gr7,csx19,csx10gr5,cas10,csx20,cas1,cas2,csx1,cas3	csx10gr5|527aa|up_6|NZ_CP019721.1_543337_544918_-,csx20|122aa|up_3|NZ_CP019721.1_547187_547553_-,csx1|673aa|down_0|NZ_CP019721.1_555023_557042_+,NA|203aa|down_4|NZ_CP019721.1_566631_567240_-,NA|125aa|down_9|NZ_CP019721.1_573572_573947_-	csm3gr7|670aa|up_9|NZ_CP019721.1_539422_541432_-	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein	csx19|188aa|up_8|NZ_CP019721.1_541433_541997_-	TIGR03984, hypothetical_protein_FrEUN1fDRAFT_5778, CRISPR-associated protein, TIGR03984 family	csm3gr7|445aa|up_7|NZ_CP019721.1_541989_543324_-	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein	csx10gr5|527aa|up_6|NZ_CP019721.1_543337_544918_-	NA	csm3gr7|216aa|up_5|NZ_CP019721.1_544905_545553_-	pfam03787, RAMPs, RAMP superfamily	cas10|534aa|up_4|NZ_CP019721.1_545555_547157_-	TIGR02578, CRISPR-associated_protein_Cas10/Csm1, CRISPR-associated protein Cas10/Csm1, subtype III-A/MTUBE	csx20|122aa|up_3|NZ_CP019721.1_547187_547553_-	NA	cas1|333aa|up_2|NZ_CP019721.1_547745_548744_-	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	cas2|93aa|up_1|NZ_CP019721.1_548758_549037_-	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	NA|140aa|up_0|NZ_CP019721.1_549148_549568_-	pfam05656, DUF805, Protein of unknown function (DUF805)	csx1|673aa|down_0|NZ_CP019721.1_555023_557042_+	NA	csx1|715aa|down_1|NZ_CP019721.1_557102_559247_-	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family	NA|799aa|down_2|NZ_CP019721.1_559388_561785_+	pfam13280, WYL, WYL domain	cas6|257aa|down_3|NZ_CP019721.1_563955_564726_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|203aa|down_4|NZ_CP019721.1_566631_567240_-	NA	NA|289aa|down_5|NZ_CP019721.1_567559_568426_-	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|355aa|down_6|NZ_CP019721.1_568716_569781_-	pfam13191, AAA_16, AAA ATPase domain	NA|383aa|down_7|NZ_CP019721.1_570256_571405_-	pfam00933, Glyco_hydro_3, Glycosyl hydrolase family 3 N terminal domain	NA|477aa|down_8|NZ_CP019721.1_571818_573249_-	TIGR02512, Periplasmic_hydrogenase_large_subunit, [FeFe] hydrogenase, group A	NA|125aa|down_9|NZ_CP019721.1_573572_573947_-	NA
GCF_002005185.1_ASM200518v1	NZ_CP019721	Veillonella parvula strain UTDB1-3 chromosome, complete genome	7	562598-563513	6,6,6	CRT,CRISPRCasFinder,PILER-CR	no	csx10gr5,csm3gr7,cas10,csx20,cas1,cas2,csx1,cas6,csa3	WYL,DEDDh,csa3,cas6,csm3gr7,csx19,csx10gr5,cas10,csx20,cas1,cas2,csx1,cas3	Type III-A,Type III-B, Type I-A?,Type III-C,Type III-D	GTTTCAATACCGTAAACGGTAAGNACTGTTGCAAC,GTTTCAATACCGTAAACGGTAAGCACTGTTGCAAC,GTTTCAATACCGTAAACGGTAAGCACTGTTGCAAC	35,35,35	1	1	562923-562963	NZ_CP019721.1_320379-320339	NA:NA:NA	12,11,9	12	TypeIII-A,TypeIII-B,TypeI-A?,TypeIII-C,TypeIII-D	WYL,DEDDh,csa3,cas6,csm3gr7,csx19,csx10gr5,cas10,csx20,cas1,cas2,csx1,cas3	csx20|122aa|up_7|NZ_CP019721.1_547187_547553_-,NA|67aa|up_3|NZ_CP019721.1_552642_552843_-,csx1|673aa|up_2|NZ_CP019721.1_555023_557042_+,NA|203aa|down_1|NZ_CP019721.1_566631_567240_-,NA|125aa|down_6|NZ_CP019721.1_573572_573947_-,NA|124aa|down_9|NZ_CP019721.1_576929_577301_-	csm3gr7|216aa|up_9|NZ_CP019721.1_544905_545553_-	pfam03787, RAMPs, RAMP superfamily	cas10|534aa|up_8|NZ_CP019721.1_545555_547157_-	TIGR02578, CRISPR-associated_protein_Cas10/Csm1, CRISPR-associated protein Cas10/Csm1, subtype III-A/MTUBE	csx20|122aa|up_7|NZ_CP019721.1_547187_547553_-	NA	cas1|333aa|up_6|NZ_CP019721.1_547745_548744_-	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	cas2|93aa|up_5|NZ_CP019721.1_548758_549037_-	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	NA|140aa|up_4|NZ_CP019721.1_549148_549568_-	pfam05656, DUF805, Protein of unknown function (DUF805)	NA|67aa|up_3|NZ_CP019721.1_552642_552843_-	NA	csx1|673aa|up_2|NZ_CP019721.1_555023_557042_+	NA	csx1|715aa|up_1|NZ_CP019721.1_557102_559247_-	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family	NA|799aa|up_0|NZ_CP019721.1_559388_561785_+	pfam13280, WYL, WYL domain	cas6|257aa|down_0|NZ_CP019721.1_563955_564726_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|203aa|down_1|NZ_CP019721.1_566631_567240_-	NA	NA|289aa|down_2|NZ_CP019721.1_567559_568426_-	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|355aa|down_3|NZ_CP019721.1_568716_569781_-	pfam13191, AAA_16, AAA ATPase domain	NA|383aa|down_4|NZ_CP019721.1_570256_571405_-	pfam00933, Glyco_hydro_3, Glycosyl hydrolase family 3 N terminal domain	NA|477aa|down_5|NZ_CP019721.1_571818_573249_-	TIGR02512, Periplasmic_hydrogenase_large_subunit, [FeFe] hydrogenase, group A	NA|125aa|down_6|NZ_CP019721.1_573572_573947_-	NA	csa3|366aa|down_7|NZ_CP019721.1_574059_575157_-	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|452aa|down_8|NZ_CP019721.1_575259_576615_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|124aa|down_9|NZ_CP019721.1_576929_577301_-	NA
GCF_002005185.1_ASM200518v1	NZ_CP019721	Veillonella parvula strain UTDB1-3 chromosome, complete genome	8	564911-566267	7,7,7	CRT,CRISPRCasFinder,PILER-CR	no	cas10,csx20,cas1,cas2,csx1,cas6,csa3	WYL,DEDDh,csa3,cas6,csm3gr7,csx19,csx10gr5,cas10,csx20,cas1,cas2,csx1,cas3	Type III-A,Type I-A,Type III-B,Type III-C,Type III-D	GTTTCCGTCCCCNNANGGGGATNATTTAATTTAAC,GTTTCCGTCCCCTAATGGGGATCATTTAATTTAAC,GGGGATCATTTAATTTAAC	35,35,19	0	0	NA	NA	NA:NA:NA	17,14,14	17	TypeIII-A,TypeI-A,TypeIII-B,TypeIII-C,TypeIII-D	WYL,DEDDh,csa3,cas6,csm3gr7,csx19,csx10gr5,cas10,csx20,cas1,cas2,csx1,cas3	csx20|122aa|up_8|NZ_CP019721.1_547187_547553_-,NA|67aa|up_4|NZ_CP019721.1_552642_552843_-,csx1|673aa|up_3|NZ_CP019721.1_555023_557042_+,NA|203aa|down_0|NZ_CP019721.1_566631_567240_-,NA|125aa|down_5|NZ_CP019721.1_573572_573947_-,NA|124aa|down_8|NZ_CP019721.1_576929_577301_-	cas10|534aa|up_9|NZ_CP019721.1_545555_547157_-	TIGR02578, CRISPR-associated_protein_Cas10/Csm1, CRISPR-associated protein Cas10/Csm1, subtype III-A/MTUBE	csx20|122aa|up_8|NZ_CP019721.1_547187_547553_-	NA	cas1|333aa|up_7|NZ_CP019721.1_547745_548744_-	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	cas2|93aa|up_6|NZ_CP019721.1_548758_549037_-	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	NA|140aa|up_5|NZ_CP019721.1_549148_549568_-	pfam05656, DUF805, Protein of unknown function (DUF805)	NA|67aa|up_4|NZ_CP019721.1_552642_552843_-	NA	csx1|673aa|up_3|NZ_CP019721.1_555023_557042_+	NA	csx1|715aa|up_2|NZ_CP019721.1_557102_559247_-	pfam09455, Cas_DxTHG, CRISPR-associated (Cas) DxTHG family	NA|799aa|up_1|NZ_CP019721.1_559388_561785_+	pfam13280, WYL, WYL domain	cas6|257aa|up_0|NZ_CP019721.1_563955_564726_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|203aa|down_0|NZ_CP019721.1_566631_567240_-	NA	NA|289aa|down_1|NZ_CP019721.1_567559_568426_-	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|355aa|down_2|NZ_CP019721.1_568716_569781_-	pfam13191, AAA_16, AAA ATPase domain	NA|383aa|down_3|NZ_CP019721.1_570256_571405_-	pfam00933, Glyco_hydro_3, Glycosyl hydrolase family 3 N terminal domain	NA|477aa|down_4|NZ_CP019721.1_571818_573249_-	TIGR02512, Periplasmic_hydrogenase_large_subunit, [FeFe] hydrogenase, group A	NA|125aa|down_5|NZ_CP019721.1_573572_573947_-	NA	csa3|366aa|down_6|NZ_CP019721.1_574059_575157_-	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|452aa|down_7|NZ_CP019721.1_575259_576615_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|124aa|down_8|NZ_CP019721.1_576929_577301_-	NA	NA|823aa|down_9|NZ_CP019721.1_577379_579848_-	PRK05560, PRK05560, DNA gyrase subunit A; Validated
GCF_002005185.1_ASM200518v1	NZ_CP019721	Veillonella parvula strain UTDB1-3 chromosome, complete genome	9	1180195-1180304	8	CRISPRCasFinder	no		WYL,DEDDh,csa3,cas6,csm3gr7,csx19,csx10gr5,cas10,csx20,cas1,cas2,csx1,cas3	Orphan	AAAACTGCAATTGATAAAAATACTGG	26	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,csa3,cas6,csm3gr7,csx19,csx10gr5,cas10,csx20,cas1,cas2,csx1,cas3	NA,NA|219aa|down_3|NZ_CP019721.1_1190292_1190949_+	NA|435aa|up_9|NZ_CP019721.1_1167287_1168592_+	pfam01964, ThiC_Rad_SAM, Radical SAM ThiC family	NA|66aa|up_8|NZ_CP019721.1_1168615_1168813_+	cd00565, Ubl_ThiS, ubiquitin-like (Ubl) domain found in sulfur carrier protein ThiS	NA|257aa|up_7|NZ_CP019721.1_1168814_1169585_+	PRK00208, thiG, thiazole synthase; Reviewed	NA|367aa|up_6|NZ_CP019721.1_1169594_1170695_+	PRK09240, thiH, 2-iminoacetate synthase ThiH	NA|214aa|up_5|NZ_CP019721.1_1170701_1171343_+	PRK08644, PRK08644, sulfur carrier protein ThiS adenylyltransferase ThiF	NA|216aa|up_4|NZ_CP019721.1_1171346_1171994_+	cd00564, TMP_TenI, Thiamine monophosphate synthase (TMP synthase)/TenI	NA|256aa|up_3|NZ_CP019721.1_1172174_1172942_+	cd10787, LamB_YcsF_like, LamB/YcsF family of  lactam utilization protein	NA|399aa|up_2|NZ_CP019721.1_1173083_1174280_+	COG1914, MntH, Mn2+ and Fe2+ transporters of the NRAMP family [Inorganic ion transport and metabolism]	NA|248aa|up_1|NZ_CP019721.1_1174354_1175098_+	pfam02682, CT_C_D, Carboxyltransferase domain, subdomain C and D	NA|341aa|up_0|NZ_CP019721.1_1175084_1176107_+	COG1984, DUR1, Allophanate hydrolase subunit 2 [Amino acid transport and metabolism]	NA|470aa|down_0|NZ_CP019721.1_1185817_1187227_+	cd13137, MATE_NorM_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Thermotoga marina NorM	NA|346aa|down_1|NZ_CP019721.1_1187779_1188817_+	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA	NA|374aa|down_2|NZ_CP019721.1_1189043_1190165_+	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|219aa|down_3|NZ_CP019721.1_1190292_1190949_+	NA	NA|506aa|down_4|NZ_CP019721.1_1191138_1192656_-	PRK06292, PRK06292, dihydrolipoamide dehydrogenase; Validated	NA|407aa|down_5|NZ_CP019721.1_1192901_1194122_-	PRK13628, PRK13628, serine/threonine transporter SstT; Provisional	NA|249aa|down_6|NZ_CP019721.1_1194468_1195215_+	PRK00216, ubiE, bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA|244aa|down_7|NZ_CP019721.1_1195195_1195927_-	COG2968, COG2968, Uncharacterized conserved protein [Function unknown]	NA|287aa|down_8|NZ_CP019721.1_1202726_1203587_+	cd10918, CE4_NodB_like_5s_6s, Putative catalytic NodB homology domain of PgaB, IcaB, and similar proteins which consist of a deformed (beta/alpha)8 barrel fold with 5- or 6-strands	NA|165aa|down_9|NZ_CP019721.1_1203595_1204090_+	cd00886, MogA_MoaB, MogA_MoaB family
GCF_002005185.1_ASM200518v1	NZ_CP019721	Veillonella parvula strain UTDB1-3 chromosome, complete genome	10	1184253-1184360	9	CRISPRCasFinder	no		WYL,DEDDh,csa3,cas6,csm3gr7,csx19,csx10gr5,cas10,csx20,cas1,cas2,csx1,cas3	Orphan	TGATATTGCAACTAATAAGGACAA	24	0	0	NA	NA	NA	1	1	Orphan	WYL,DEDDh,csa3,cas6,csm3gr7,csx19,csx10gr5,cas10,csx20,cas1,cas2,csx1,cas3	NA,NA|219aa|down_3|NZ_CP019721.1_1190292_1190949_+	NA|435aa|up_9|NZ_CP019721.1_1167287_1168592_+	pfam01964, ThiC_Rad_SAM, Radical SAM ThiC family	NA|66aa|up_8|NZ_CP019721.1_1168615_1168813_+	cd00565, Ubl_ThiS, ubiquitin-like (Ubl) domain found in sulfur carrier protein ThiS	NA|257aa|up_7|NZ_CP019721.1_1168814_1169585_+	PRK00208, thiG, thiazole synthase; Reviewed	NA|367aa|up_6|NZ_CP019721.1_1169594_1170695_+	PRK09240, thiH, 2-iminoacetate synthase ThiH	NA|214aa|up_5|NZ_CP019721.1_1170701_1171343_+	PRK08644, PRK08644, sulfur carrier protein ThiS adenylyltransferase ThiF	NA|216aa|up_4|NZ_CP019721.1_1171346_1171994_+	cd00564, TMP_TenI, Thiamine monophosphate synthase (TMP synthase)/TenI	NA|256aa|up_3|NZ_CP019721.1_1172174_1172942_+	cd10787, LamB_YcsF_like, LamB/YcsF family of  lactam utilization protein	NA|399aa|up_2|NZ_CP019721.1_1173083_1174280_+	COG1914, MntH, Mn2+ and Fe2+ transporters of the NRAMP family [Inorganic ion transport and metabolism]	NA|248aa|up_1|NZ_CP019721.1_1174354_1175098_+	pfam02682, CT_C_D, Carboxyltransferase domain, subdomain C and D	NA|341aa|up_0|NZ_CP019721.1_1175084_1176107_+	COG1984, DUR1, Allophanate hydrolase subunit 2 [Amino acid transport and metabolism]	NA|470aa|down_0|NZ_CP019721.1_1185817_1187227_+	cd13137, MATE_NorM_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Thermotoga marina NorM	NA|346aa|down_1|NZ_CP019721.1_1187779_1188817_+	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA	NA|374aa|down_2|NZ_CP019721.1_1189043_1190165_+	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|219aa|down_3|NZ_CP019721.1_1190292_1190949_+	NA	NA|506aa|down_4|NZ_CP019721.1_1191138_1192656_-	PRK06292, PRK06292, dihydrolipoamide dehydrogenase; Validated	NA|407aa|down_5|NZ_CP019721.1_1192901_1194122_-	PRK13628, PRK13628, serine/threonine transporter SstT; Provisional	NA|249aa|down_6|NZ_CP019721.1_1194468_1195215_+	PRK00216, ubiE, bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA|244aa|down_7|NZ_CP019721.1_1195195_1195927_-	COG2968, COG2968, Uncharacterized conserved protein [Function unknown]	NA|287aa|down_8|NZ_CP019721.1_1202726_1203587_+	cd10918, CE4_NodB_like_5s_6s, Putative catalytic NodB homology domain of PgaB, IcaB, and similar proteins which consist of a deformed (beta/alpha)8 barrel fold with 5- or 6-strands	NA|165aa|down_9|NZ_CP019721.1_1203595_1204090_+	cd00886, MogA_MoaB, MogA_MoaB family
