The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP019721	Veillonella parvula strain UTDB1-3 chromosome, complete genome	2178518	323512	342708	2178518	terminase,head,portal	Synechococcus_phage(23.08%)	18	NA	NA
WP_077707712.1|323512_325402_-|head	Mu-like prophage major head subunit gpT family protein	head	A0A1W6JT88	Pseudomonas_phage	43.5	1.5e-60
WP_077707713.1|325401_326883_-|portal	phage portal protein	portal	G8CLA3	Synechococcus_phage	29.5	1.1e-58
WP_077707714.1|326879_327086_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077707715.1|327101_328985_-|terminase	phage terminase large subunit family protein	terminase	A0A2K9V301	Faecalibacterium_phage	42.3	2.6e-116
WP_077707716.1|328890_329427_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077707717.1|329717_330104_-	DUF1492 domain-containing protein	NA	A0A218MNE1	uncultured_virus	40.5	2.1e-09
WP_077707719.1|330281_330536_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077707720.1|330507_331032_-	DUF3310 domain-containing protein	NA	A0A1B1IWM3	uncultured_Mediterranean_phage	61.3	1.1e-13
WP_077707721.1|331033_332416_-	DEAD/DEAH box helicase	NA	S5MA26	Brevibacillus_phage	51.3	1.7e-136
WP_077707722.1|332415_332712_-	VRR-NUC domain-containing protein	NA	A0A2I6PE31	Staphylococcus_phage	37.9	8.7e-11
WP_077707723.1|332983_335458_-	virulence-associated protein E	NA	A0A1S7FZ15	Listeria_phage	42.2	7.7e-185
WP_077707724.1|335470_337435_-	DNA polymerase	NA	H7BVQ1	unidentified_phage	50.3	1.2e-177
WP_077707725.1|337447_338167_-	DUF2815 family protein	NA	A0A2K5B2A9	Erysipelothrix_phage	36.9	8.1e-18
WP_077707726.1|338169_339354_-	DUF2800 domain-containing protein	NA	H7BVP9	unidentified_phage	46.8	4.3e-93
WP_077707727.1|339353_339923_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077707728.1|339915_340881_-	site-specific DNA-methyltransferase	NA	F4YCV3	Synechococcus_phage	56.3	2.6e-96
WP_077707729.1|340855_341338_-	DUF4406 domain-containing protein	NA	NA	NA	NA	NA
WP_077707730.1|341334_342708_-	helicase	NA	F4YCV3	Synechococcus_phage	52.3	1.3e-133
>prophage 2
NZ_CP019721	Veillonella parvula strain UTDB1-3 chromosome, complete genome	2178518	1045906	1051895	2178518		Prochlorococcus_phage(33.33%)	6	NA	NA
WP_077708108.1|1045906_1046398_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	47.7	1.0e-32
WP_038149765.1|1046532_1047246_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3FCN6	Synechococcus_phage	44.8	6.3e-47
WP_077708109.1|1047256_1048675_+	amidophosphoribosyltransferase	NA	A0A1B1ISH6	uncultured_Mediterranean_phage	31.3	9.9e-52
WP_077708110.1|1048661_1049723_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SQF5	Cyanophage	42.0	7.1e-63
WP_077708111.1|1049715_1050339_+	phosphoribosylglycinamide formyltransferase	NA	E3SNR5	Prochlorococcus_phage	32.1	2.0e-20
WP_077708112.1|1050365_1051895_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	53.0	3.6e-76
>prophage 3
NZ_CP019721	Veillonella parvula strain UTDB1-3 chromosome, complete genome	2178518	1063084	1139493	2178518	terminase,tRNA,plate,tail,capsid,protease,integrase,portal	Bacteriophage(25.0%)	102	1063069:1063087	1101978:1101996
1063069:1063087	attL	TGACATCATTTTGACATCA	NA	NA	NA	NA
WP_077708121.1|1063084_1064158_-|integrase	site-specific integrase	integrase	A0A0A8WIE1	Clostridium_phage	29.8	6.1e-30
WP_077708122.1|1064398_1065145_-	type II toxin-antitoxin system PemK/MazF family toxin	NA	J7KDP1	Streptococcus_phage	28.8	6.4e-10
WP_077708123.1|1065215_1065749_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077708645.1|1065766_1066018_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_187658831.1|1066067_1067264_-	Abi family protein	NA	A0A1Q1PVS3	Staphylococcus_phage	27.7	3.1e-14
WP_077708125.1|1067302_1067704_-	helix-turn-helix transcriptional regulator	NA	A0A2I6PD82	Staphylococcus_phage	36.4	3.1e-11
WP_077708126.1|1067883_1068114_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_077708127.1|1068129_1068390_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077708128.1|1068376_1068949_-	hypothetical protein	NA	NA	NA	NA	NA
WP_077708129.1|1069349_1069694_-	hypothetical protein	NA	NA	NA	NA	NA
WP_187658832.1|1069855_1070011_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077708130.1|1069994_1070282_-	hypothetical protein	NA	M9Q2L4	Clostridium_phage	53.9	5.3e-21
WP_077708131.1|1070471_1071137_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008715497.1|1071245_1071446_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_187658833.1|1071462_1071627_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077708132.1|1071692_1071980_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077708133.1|1072301_1073099_+	hypothetical protein	NA	H7BW41	unidentified_phage	39.0	1.4e-18
WP_077708134.1|1073131_1073503_+	single-stranded DNA-binding protein	NA	E5DV85	Deep-sea_thermophilic_phage	36.3	8.9e-13
WP_077708135.1|1073515_1073722_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077708136.1|1073796_1074024_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_077708137.1|1074048_1074822_+	phage antirepressor KilAC domain-containing protein	NA	A0A0A8WIE3	Clostridium_phage	47.1	5.0e-58
WP_077708138.1|1074818_1075235_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077708139.1|1075290_1075743_+	MmcB family DNA repair protein	NA	NA	NA	NA	NA
WP_077708141.1|1075991_1076336_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077708142.1|1076328_1076787_+	class I SAM-dependent methyltransferase	NA	A8ATY8	Listeria_phage	66.2	8.6e-58
WP_077708143.1|1076844_1077342_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077708646.1|1077337_1077685_+	DUF4406 domain-containing protein	NA	NA	NA	NA	NA
WP_077708144.1|1077681_1078107_+	DUF1492 domain-containing protein	NA	NA	NA	NA	NA
WP_187658834.1|1078260_1078554_+	HNH endonuclease	NA	NA	NA	NA	NA
WP_077708146.1|1078944_1079475_+	hypothetical protein	NA	A0A0C5AN04	Bacteriophage	36.2	1.0e-14
WP_077708147.1|1079508_1081413_+|terminase	phage terminase large subunit family protein	terminase	A0A2K9V2Q8	Faecalibacterium_phage	43.4	1.2e-140
WP_060923706.1|1081421_1081667_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077708148.1|1081676_1083284_+|portal	phage portal protein	portal	A0A2K9V452	Faecalibacterium_phage	42.6	4.8e-111
WP_077708149.1|1083276_1084359_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A0C5AEN1	Bacteriophage	30.5	2.4e-37
WP_077708150.1|1084358_1084697_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077708151.1|1084710_1085760_+|capsid	major capsid protein	capsid	NA	NA	NA	NA
WP_077708152.1|1085774_1086011_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077708647.1|1086010_1086364_+	hypothetical protein	NA	A0A2K9V315	Faecalibacterium_phage	33.6	7.5e-09
WP_077708153.1|1086351_1086885_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077708154.1|1086884_1087364_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077708155.1|1087373_1087601_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077708156.1|1087601_1089041_+|tail	phage tail protein	tail	A0A059WKP9	Vibrio_phage	47.3	1.0e-120
WP_038125816.1|1089057_1089591_+|tail	phage major tail tube protein	tail	A0A0C5AJ56	Bacteriophage	37.9	4.3e-24
WP_077708157.1|1089613_1089910_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077708158.1|1090079_1092416_+	hypothetical protein	NA	A0A0C5ABJ2	Bacteriophage	31.5	1.4e-07
WP_060924349.1|1092408_1092612_+|tail	tail protein X	tail	A0A0C5AEF4	Bacteriophage	55.2	5.2e-15
WP_077708159.1|1092615_1093776_+	hypothetical protein	NA	A0A0C5AJ59	Bacteriophage	34.8	7.1e-48
WP_077708160.1|1093765_1094230_+|plate	baseplate assembly protein	plate	A0A059WRL9	Vibrio_phage	34.7	1.6e-11
WP_077708161.1|1094239_1094716_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_077708162.1|1094718_1095030_+	hypothetical protein	NA	A0A067ZJ13	Vibrio_phage	44.1	3.0e-14
WP_077708163.1|1095026_1096148_+|plate	baseplate J/gp47 family protein	plate	A0A0C5AEG2	Bacteriophage	43.3	2.7e-76
WP_077708164.1|1096144_1096804_+|tail	phage tail protein I	tail	A0A0C5AJ63	Bacteriophage	39.2	3.8e-22
WP_077708165.1|1096813_1097710_+	hypothetical protein	NA	A0A0C5AEQ0	Bacteriophage	33.5	2.2e-12
WP_077708166.1|1098001_1098853_-|integrase	site-specific integrase	integrase	A0A0E3Y5J2	Fusobacterium_phage	33.1	6.8e-32
WP_077708167.1|1098879_1099269_+	hypothetical protein	NA	NA	NA	NA	NA
WP_174892239.1|1099270_1099411_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077708168.1|1099427_1099979_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077708169.1|1099971_1100364_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077708170.1|1100364_1100940_+	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA	NA
WP_077708648.1|1101097_1101481_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077708171.1|1101650_1101968_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077708172.1|1102319_1103168_-	DNA damage-inducible protein D	NA	A0A1W6JPJ7	Morganella_phage	58.6	1.9e-66
1101978:1101996	attR	TGACATCATTTTGACATCA	NA	NA	NA	NA
WP_077708173.1|1103193_1103571_-	helix-turn-helix transcriptional regulator	NA	A0A2H4J5K1	uncultured_Caudovirales_phage	46.2	3.6e-09
WP_077708174.1|1104151_1104628_-	DUF2321 domain-containing protein	NA	NA	NA	NA	NA
WP_077708175.1|1104642_1104933_-	hypothetical protein	NA	A0A1J0MFQ1	Staphylococcus_phage	40.0	7.5e-07
WP_077708176.1|1104976_1105192_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077708177.1|1105162_1105510_-	DUF2513 domain-containing protein	NA	NA	NA	NA	NA
WP_077708178.1|1106324_1106966_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077708179.1|1107075_1108449_-	MFS transporter	NA	NA	NA	NA	NA
WP_077708180.1|1108661_1108874_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077708181.1|1108980_1109772_-	carbon-nitrogen family hydrolase	NA	NA	NA	NA	NA
WP_077708182.1|1109977_1110541_+	nitroreductase family protein	NA	NA	NA	NA	NA
WP_077708183.1|1110609_1111413_+	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_004693677.1|1111424_1112363_+	phosphodiester glycosidase family protein	NA	A0A1P8CWN9	Bacillus_phage	29.2	4.7e-10
WP_077708184.1|1112371_1113319_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077708185.1|1113391_1114567_+	glycosyltransferase family 9 protein	NA	NA	NA	NA	NA
WP_004698343.1|1114553_1114880_+	hypothetical protein	NA	NA	NA	NA	NA
WP_008602782.1|1115424_1116777_+	pyruvate carboxylase subunit B	NA	NA	NA	NA	NA
WP_077708186.1|1117226_1118567_+	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	25.6	5.9e-22
WP_004693664.1|1118563_1119253_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.9	7.7e-34
WP_004698370.1|1119919_1121017_+	trypsin-like peptidase domain-containing protein	NA	W5SAB9	Pithovirus	31.5	7.2e-10
WP_077708187.1|1121376_1121706_+	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_008602778.1|1121692_1122268_+	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_077708188.1|1122277_1122640_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_077708189.1|1122824_1123412_-	orotate phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_004698328.1|1123408_1124128_-	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA	NA
WP_008602770.1|1124316_1124946_+	3'-5' exonuclease	NA	A0A2I6PEZ7	Staphylococcus_phage	30.1	1.6e-14
WP_004698377.1|1124960_1125623_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA	NA
WP_021147799.1|1125676_1126978_+	pyrimidine-nucleoside phosphorylase	NA	A0A0H3UZD4	Geobacillus_virus	51.1	4.6e-112
WP_174892240.1|1126988_1127414_+	cytidine deaminase	NA	NA	NA	NA	NA
WP_077708190.1|1127391_1128849_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_021147802.1|1128853_1129489_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_021147803.1|1129648_1131133_+	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	27.1	3.6e-20
WP_021147804.1|1131137_1131857_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.6	8.0e-42
WP_004698373.1|1131960_1132779_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_021147805.1|1132922_1133825_-	1,4-dihydroxy-2-naphthoate octaprenyltransferase	NA	NA	NA	NA	NA
WP_021147806.1|1134067_1135012_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021147807.1|1135013_1135793_+	hypothetical protein	NA	NA	NA	NA	NA
WP_021147808.1|1135925_1136297_+	RidA family protein	NA	NA	NA	NA	NA
WP_077708192.1|1136298_1137546_+	serine dehydratase subunit alpha family protein	NA	NA	NA	NA	NA
WP_012863974.1|1137657_1138845_-	MFS transporter	NA	NA	NA	NA	NA
WP_077708650.1|1138947_1139493_-|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	NA	NA	NA	NA
>prophage 4
NZ_CP019721	Veillonella parvula strain UTDB1-3 chromosome, complete genome	2178518	1802518	1810782	2178518	tRNA	uncultured_virus(33.33%)	8	NA	NA
WP_004696035.1|1802518_1803262_-	Fe-S cluster assembly ATPase SufC	NA	G9BWD6	Planktothrix_phage	25.4	1.9e-09
WP_008714049.1|1803556_1804813_-	diaminopimelate decarboxylase	NA	NA	NA	NA	NA
WP_004696040.1|1804876_1805293_-	DoxX family protein	NA	D2X5Z2	uncultured_marine_phage	33.9	3.5e-05
WP_077708474.1|1805626_1807252_-	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	56.8	1.6e-159
WP_077708475.1|1807364_1807646_-	co-chaperone GroES	NA	A0A221S3C8	uncultured_virus	52.7	2.0e-17
WP_077708476.1|1807777_1808356_-	response regulator	NA	Q6XM27	Feldmannia_irregularis_virus	28.7	2.3e-07
WP_077708477.1|1808356_1809748_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_077708478.1|1809750_1810782_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	43.4	1.0e-69
>prophage 5
NZ_CP019721	Veillonella parvula strain UTDB1-3 chromosome, complete genome	2178518	1974848	1985379	2178518		uncultured_phage(42.86%)	10	NA	NA
WP_077708557.1|1974848_1975952_-	Nif3-like dinuclear metal center hexameric protein	NA	A0A2P1EK93	Megavirus	38.0	6.4e-14
WP_077708558.1|1975967_1976699_-	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_021148327.1|1977031_1977595_-	GTP cyclohydrolase I	NA	S4U0J3	uncultured_phage	67.2	7.1e-62
WP_042986446.1|1977681_1978425_-	4Fe-4S cluster-binding domain-containing protein	NA	S4TZT1	uncultured_phage	47.8	4.7e-53
WP_021148329.1|1978411_1978750_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	68.8	4.4e-43
WP_077708559.1|1978955_1980116_-	RNA polymerase sigma factor RpoD	NA	F4YCU2	Synechococcus_phage	37.6	9.3e-40
WP_077708560.1|1980144_1981917_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	1.8e-55
WP_038125528.1|1982173_1983679_-	ribonuclease Y	NA	NA	NA	NA	NA
WP_039965037.1|1983892_1984336_-	regulatory protein RecX	NA	NA	NA	NA	NA
WP_008601363.1|1984338_1985379_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	63.6	9.6e-121
>prophage 6
NZ_CP019721	Veillonella parvula strain UTDB1-3 chromosome, complete genome	2178518	2043625	2053096	2178518	tRNA,protease	Klosneuvirus(16.67%)	7	NA	NA
WP_077708585.1|2043625_2046283_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	41.7	3.4e-170
WP_021148371.1|2046303_2047194_-	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	28.9	4.0e-19
WP_021148372.1|2047195_2048167_-	polyprenyl synthetase family protein	NA	A0A1V0SE37	Indivirus	23.8	8.6e-07
WP_008601447.1|2048163_2048862_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_004696511.1|2048861_2051171_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	44.7	1.5e-177
WP_038125529.1|2051236_2052469_-|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	62.7	9.9e-141
WP_004696517.1|2052502_2053096_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	55.0	4.0e-55
