bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	3.1|843871|26|NZ_CP014432|CRISPRCasFinder	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	96.15	26	1	0	1	26	806833	806808	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	1e-05	39.6	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	806808-806833	CGGGGCCCCAACACAGAAGCAGGCGG	1
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	3.1|843871|26|NZ_CP014432|CRISPRCasFinder	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	96.15	26	1	0	1	26	2872900	2872925	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	1e-05	39.6	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	2872900-2872925	CCGCCAGCTTCTTTGTTGGGGCCCCG	1
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	3.1|843871|26|NZ_CP014432|CRISPRCasFinder	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	96.15	26	1	0	1	26	2872956	2872981	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	1e-05	39.6	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	2872956-2872981	CCGCCAGCTTCTTTGTTGGGGCCCCG	1
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	3.1|843871|26|NZ_CP014432|CRISPRCasFinder	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	92.31	26	2	0	1	26	806889	806864	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	1e-04	36.5	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	806864-806889	CGGGGCCCCAACATAGAAGCAGGCGG	2
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	3.1|843871|26|NZ_CP014432|CRISPRCasFinder	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	92.31	26	2	0	1	26	993566	993541	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	1e-04	36.5	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	993541-993566	CGGGGCCCCAACACAGAGGCTGGTGG	2
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	4.1|887193|34|NZ_CP014432|CRISPRCasFinder	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	100.00	34	0	0	1	34	1419773	1419740	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	5e-10	55.5	1.0	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	1419740-1419773	ATGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	0
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	4.1|887193|34|NZ_CP014432|CRISPRCasFinder	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	100.00	34	0	0	1	34	1508932	1508965	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	5e-10	55.5	1.0	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	1508932-1508965	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	0
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	5.1|993597|26|NZ_CP014432|CRT	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	96.15	26	1	0	1	26	993541	993566	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	1e-05	39.6	1.0	CGGGGCCCCAACACAGAGGCTGGCGG	993541-993566	CGGGGCCCCAACACAGAGGCTGGTGG	1
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	5.1|993597|26|NZ_CP014432|CRT	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	92.31	26	2	0	1	26	806808	806833	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	1e-04	36.5	1.0	CGGGGCCCCAACACAGAGGCTGGCGG	806808-806833	CGGGGCCCCAACACAGAAGCAGGCGG	2
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	5.1|993597|26|NZ_CP014432|CRT	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	92.31	26	2	0	1	26	2872925	2872900	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	1e-04	36.5	1.0	CGGGGCCCCAACACAGAGGCTGGCGG	2872900-2872925	CCGCCAGCTTCTTTGTTGGGGCCCCG	2
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	5.1|993597|26|NZ_CP014432|CRT	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	92.31	26	2	0	1	26	2872981	2872956	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	1e-04	36.5	1.0	CGGGGCCCCAACACAGAGGCTGGCGG	2872956-2872981	CCGCCAGCTTCTTTGTTGGGGCCCCG	2
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	5.3|993711|26|NZ_CP014432|CRT	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	96.15	26	1	0	1	26	843952	843927	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	1e-05	39.6	1.0	CGGGGCCCCAACACAGAAGCTGGCGA	843927-843952	TCGTCAGCTTCTGTGTTGGGGCCCCG	1
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	5.3|993711|26|NZ_CP014432|CRT	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	92.31	26	2	0	1	26	390205	390230	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	1e-04	36.5	1.0	CGGGGCCCCAACACAGAAGCTGGCGA	390205-390230	CGGGGCCCCAACAAAGAAGCTGACGA	2
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	7.1|2072581|33|NZ_CP014432|CRISPRCasFinder	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	96.97	33	1	0	1	33	843907	843939	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	1e-08	50.7	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	843907-843939	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	1
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	7.1|2072581|33|NZ_CP014432|CRISPRCasFinder	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	96.97	33	1	0	1	33	1211602	1211570	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	1e-08	50.7	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	1211570-1211602	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	1
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	7.1|2072581|33|NZ_CP014432|CRISPRCasFinder	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	96.97	33	1	0	1	33	1419727	1419695	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	1e-08	50.7	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	1419695-1419727	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	1
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	7.1|2072581|33|NZ_CP014432|CRISPRCasFinder	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	96.97	33	1	0	1	33	1737496	1737528	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	1e-08	50.7	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	1737496-1737528	CATTATAGTAAGCTGACTTTTCGTCAGCTTCTG	1
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	7.1|2072581|33|NZ_CP014432|CRISPRCasFinder	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	96.97	33	1	0	1	33	2707550	2707582	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	1e-08	50.7	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	2707550-2707582	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	1
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	7.1|2072581|33|NZ_CP014432|CRISPRCasFinder	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	93.94	33	2	0	1	33	1508978	1509010	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	1e-07	47.5	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	1508978-1509010	CATTATTGTAAGCTGACTTTTCGTCATCTTCTG	2
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	9.1|2431622|33|NZ_CP014432|CRT	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	93.94	33	2	0	1	33	843907	843939	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	843907-843939	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	9.1|2431622|33|NZ_CP014432|CRT	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	93.94	33	2	0	1	33	1211602	1211570	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	1211570-1211602	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	9.1|2431622|33|NZ_CP014432|CRT	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	93.94	33	2	0	1	33	1419727	1419695	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	1419695-1419727	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	9.1|2431622|33|NZ_CP014432|CRT	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	93.94	33	2	0	1	33	1508978	1509010	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	1508978-1509010	CATTATTGTAAGCTGACTTTTCGTCATCTTCTG	2
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	9.1|2431622|33|NZ_CP014432|CRT	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	93.94	33	2	0	1	33	2707550	2707582	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	2707550-2707582	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	9.2|2431678|36|NZ_CP014432|CRT	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	100.00	36	0	0	1	36	1211549	1211514	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	6e-11	58.6	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	1211514-1211549	TAGAGAATTTCAAAAAGAAATTCTACAGACAATGCA	0
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	9.2|2431678|36|NZ_CP014432|CRT	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	97.22	36	1	0	1	36	1915983	1915948	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	5e-10	55.5	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	1915948-1915983	TAGAGAATTTCGAAAAGAAATTCTACAGACAATGCA	1
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	9.2|2431678|36|NZ_CP014432|CRT	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	94.44	36	2	0	1	36	1737435	1737470	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	5e-09	52.3	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	1737435-1737470	TGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTA	2
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	9.2|2431678|36|NZ_CP014432|CRT	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	94.44	36	2	0	1	36	2083384	2083419	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	5e-09	52.3	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	2083384-2083419	TGCATTGTCTGTAGAATTTCCTTTCGAAATTCTCTA	2
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	9.3|2431737|33|NZ_CP014432|CRT	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	93.94	33	2	0	1	33	843907	843939	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	1e-07	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	843907-843939	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	9.3|2431737|33|NZ_CP014432|CRT	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	93.94	33	2	0	1	33	1211602	1211570	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	1e-07	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	1211570-1211602	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	9.3|2431737|33|NZ_CP014432|CRT	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	93.94	33	2	0	1	33	1419727	1419695	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	1e-07	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	1419695-1419727	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
NZ_CP014432	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	9.3|2431737|33|NZ_CP014432|CRT	NZ_CP014432.1	Staphylococcus aureus strain USA300-SUR20 chromosome, complete genome	93.94	33	2	0	1	33	2707550	2707582	428872-428972|668031-668123|843841-843926|887169-887250|993567-993849|1127239-1127326|2072558-2072636|2307681-2307831|2431599-2431792	1e-07	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	2707550-2707582	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
