bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	3.1|848390|26|NZ_CP014423|CRISPRCasFinder	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	96.15	26	1	0	1	26	811352	811327	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	1e-05	39.6	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	811327-811352	CGGGGCCCCAACACAGAAGCAGGCGG	1
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	3.1|848390|26|NZ_CP014423|CRISPRCasFinder	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	96.15	26	1	0	1	26	2877292	2877317	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	1e-05	39.6	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	2877292-2877317	CCGCCAGCTTCTATGTTGGGGCCCCG	1
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	3.1|848390|26|NZ_CP014423|CRISPRCasFinder	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	96.15	26	1	0	1	26	2877348	2877373	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	1e-05	39.6	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	2877348-2877373	CCGCCAGCTTCTTTGTTGGGGCCCCG	1
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	3.1|848390|26|NZ_CP014423|CRISPRCasFinder	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	92.31	26	2	0	1	26	811408	811383	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	1e-04	36.5	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	811383-811408	CGGGGCCCCAACATAGAAGCAGGCGG	2
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	3.1|848390|26|NZ_CP014423|CRISPRCasFinder	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	92.31	26	2	0	1	26	998085	998060	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	1e-04	36.5	1.0	CCGCCAGCTTCTGTGTTGGGGCCCCG	998060-998085	CGGGGCCCCAACACAGAGGCTGGTGG	2
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	4.1|891713|34|NZ_CP014423|CRISPRCasFinder	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	100.00	34	0	0	1	34	1424292	1424259	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	5e-10	55.5	1.0	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	1424259-1424292	ATGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	0
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	4.1|891713|34|NZ_CP014423|CRISPRCasFinder	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	100.00	34	0	0	1	34	1513451	1513484	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	5e-10	55.5	1.0	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	1513451-1513484	ATTGGGAATCCAATTTCTCTTTGTTGGGGCCCAT	0
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	5.1|998116|26|NZ_CP014423|CRT	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	96.15	26	1	0	1	26	998060	998085	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	1e-05	39.6	1.0	CGGGGCCCCAACACAGAGGCTGGCGG	998060-998085	CGGGGCCCCAACACAGAGGCTGGTGG	1
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	5.1|998116|26|NZ_CP014423|CRT	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	92.31	26	2	0	1	26	811327	811352	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	1e-04	36.5	1.0	CGGGGCCCCAACACAGAGGCTGGCGG	811327-811352	CGGGGCCCCAACACAGAAGCAGGCGG	2
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	5.1|998116|26|NZ_CP014423|CRT	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	92.31	26	2	0	1	26	2877317	2877292	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	1e-04	36.5	1.0	CGGGGCCCCAACACAGAGGCTGGCGG	2877292-2877317	CCGCCAGCTTCTATGTTGGGGCCCCG	2
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	5.1|998116|26|NZ_CP014423|CRT	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	92.31	26	2	0	1	26	2877373	2877348	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	1e-04	36.5	1.0	CGGGGCCCCAACACAGAGGCTGGCGG	2877348-2877373	CCGCCAGCTTCTTTGTTGGGGCCCCG	2
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	5.3|998230|26|NZ_CP014423|CRT	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	96.15	26	1	0	1	26	848471	848446	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	1e-05	39.6	1.0	CGGGGCCCCAACACAGAAGCTGGCGA	848446-848471	TCGTCAGCTTCTGTGTTGGGGCCCCG	1
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	5.3|998230|26|NZ_CP014423|CRT	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	92.31	26	2	0	1	26	394724	394749	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	1e-04	36.5	1.0	CGGGGCCCCAACACAGAAGCTGGCGA	394724-394749	CGGGGCCCCAACAAAGAAGCTGACGA	2
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	7.1|2077090|33|NZ_CP014423|CRISPRCasFinder	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	96.97	33	1	0	1	33	848426	848458	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	1e-08	50.7	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	848426-848458	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	1
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	7.1|2077090|33|NZ_CP014423|CRISPRCasFinder	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	96.97	33	1	0	1	33	1216121	1216089	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	1e-08	50.7	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	1216089-1216121	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	1
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	7.1|2077090|33|NZ_CP014423|CRISPRCasFinder	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	96.97	33	1	0	1	33	1424246	1424214	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	1e-08	50.7	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	1424214-1424246	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	1
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	7.1|2077090|33|NZ_CP014423|CRISPRCasFinder	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	96.97	33	1	0	1	33	1742015	1742047	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	1e-08	50.7	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	1742015-1742047	CATTATAGTAAGCTGACTTTTCGTCAGCTTCTG	1
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	7.1|2077090|33|NZ_CP014423|CRISPRCasFinder	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	96.97	33	1	0	1	33	2712008	2712040	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	1e-08	50.7	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	2712008-2712040	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	1
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	7.1|2077090|33|NZ_CP014423|CRISPRCasFinder	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	93.94	33	2	0	1	33	1513497	1513529	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	1e-07	47.5	1.0	CATTATCGTAAGCTGACTTTTCGTCAGCTTCTG	1513497-1513529	CATTATTGTAAGCTGACTTTTCGTCATCTTCTG	2
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	9.1|2436071|33|NZ_CP014423|CRT	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	93.94	33	2	0	1	33	848426	848458	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	848426-848458	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	9.1|2436071|33|NZ_CP014423|CRT	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	93.94	33	2	0	1	33	1216121	1216089	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	1216089-1216121	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	9.1|2436071|33|NZ_CP014423|CRT	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	93.94	33	2	0	1	33	1424246	1424214	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	1424214-1424246	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	9.1|2436071|33|NZ_CP014423|CRT	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	93.94	33	2	0	1	33	1513497	1513529	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	1513497-1513529	CATTATTGTAAGCTGACTTTTCGTCATCTTCTG	2
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	9.1|2436071|33|NZ_CP014423|CRT	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	93.94	33	2	0	1	33	2712008	2712040	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	1e-07	47.5	1.0	CATTATTGTATGCTGACTTTTCGTCACCTTCTG	2712008-2712040	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	9.2|2436127|36|NZ_CP014423|CRT	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	100.00	36	0	0	1	36	1216068	1216033	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	6e-11	58.6	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	1216033-1216068	TAGAGAATTTCAAAAAGAAATTCTACAGACAATGCA	0
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	9.2|2436127|36|NZ_CP014423|CRT	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	97.22	36	1	0	1	36	1920502	1920467	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	5e-10	55.5	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	1920467-1920502	TAGAGAATTTCGAAAAGAAATTCTACAGACAATGCA	1
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	9.2|2436127|36|NZ_CP014423|CRT	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	94.44	36	2	0	1	36	1741954	1741989	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	5e-09	52.3	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	1741954-1741989	TGCATTGCCTGTAGAATTTCTTTTCGAAATTCTCTA	2
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	9.2|2436127|36|NZ_CP014423|CRT	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	94.44	36	2	0	1	36	2087834	2087869	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	5e-09	52.3	1.0	TGCATTGTCTGTAGAATTTCTTTTTGAAATTCTCTA	2087834-2087869	TGCATTGTCTGTAGAATTTCCTTTCGAAATTCTCTA	2
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	9.3|2436186|33|NZ_CP014423|CRT	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	93.94	33	2	0	1	33	848426	848458	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	1e-07	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	848426-848458	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	9.3|2436186|33|NZ_CP014423|CRT	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	93.94	33	2	0	1	33	1216121	1216089	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	1e-07	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	1216089-1216121	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	9.3|2436186|33|NZ_CP014423|CRT	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	93.94	33	2	0	1	33	1424246	1424214	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	1e-07	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	1424214-1424246	CAGAAGCTGACGAAAAGTCAGCTTACAATAATG	2
NZ_CP014423	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	9.3|2436186|33|NZ_CP014423|CRT	NZ_CP014423.1	Staphylococcus aureus strain USA300-SUR17 chromosome, complete genome	93.94	33	2	0	1	33	2712008	2712040	433391-433491|672550-672642|848360-848445|891689-891770|998086-998368|1131758-1131845|2077067-2077145|2312130-2312280|2436048-2436241	1e-07	47.5	1.0	CATTATTGTAAGCTGACTTTCTGTCAGCTTCTG	2712008-2712040	CATTATTGTAAGCTGACTTTTCGTCAGCTTCTG	2
