assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001999985.1_ASM199998v1	NZ_CP019645	Helicobacter bilis strain AAQJH chromosome, complete genome	1	448154-448264	1	CRISPRCasFinder	no		DEDDh,WYL,cas4,cas3	Orphan	GACATCTTCGCATAAAACATACATGATAATAGACATAATAC	41	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,cas4,cas3	NA|180aa|up_5|NZ_CP019645.1_441462_442002_+,NA|311aa|up_2|NZ_CP019645.1_444718_445651_+,NA|103aa|up_1|NZ_CP019645.1_445821_446130_-,NA|106aa|down_1|NZ_CP019645.1_454503_454821_+,NA|83aa|down_2|NZ_CP019645.1_455060_455309_-,NA|129aa|down_4|NZ_CP019645.1_456820_457207_+,NA|362aa|down_5|NZ_CP019645.1_458326_459412_+,NA|222aa|down_7|NZ_CP019645.1_461344_462010_+	NA|92aa|up_9|NZ_CP019645.1_437787_438063_+	PRK00720, tatA, twin-arginine translocase TatA/TatE family subunit	NA|557aa|up_8|NZ_CP019645.1_438232_439903_+	PRK01611, argS, arginyl-tRNA synthetase; Reviewed	NA|306aa|up_7|NZ_CP019645.1_440098_441016_+	sd00010, SLR, Sel1-like repeat	NA|93aa|up_6|NZ_CP019645.1_441171_441450_+	pfam04359, DUF493, Protein of unknown function (DUF493)	NA|180aa|up_5|NZ_CP019645.1_441462_442002_+	NA	NA|426aa|up_4|NZ_CP019645.1_442039_443317_+	cd10936, CE4_DAC2, Putative catalytic domain of family 2 polysaccharide deacetylases (DACs) from bacteria	NA|429aa|up_3|NZ_CP019645.1_443432_444719_+	PRK06349, PRK06349, homoserine dehydrogenase; Provisional	NA|311aa|up_2|NZ_CP019645.1_444718_445651_+	NA	NA|103aa|up_1|NZ_CP019645.1_445821_446130_-	NA	NA|96aa|up_0|NZ_CP019645.1_446120_446408_-	smart00028, TPR, Tetratricopeptide repeats	NA|1550aa|down_0|NZ_CP019645.1_449814_454464_+	pfam18809, PBECR1, phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease1	NA|106aa|down_1|NZ_CP019645.1_454503_454821_+	NA	NA|83aa|down_2|NZ_CP019645.1_455060_455309_-	NA	NA|193aa|down_3|NZ_CP019645.1_455286_455865_-	TIGR02274, Probable_deoxycytidine_triphosphate_deaminase, deoxycytidine triphosphate deaminase	NA|129aa|down_4|NZ_CP019645.1_456820_457207_+	NA	NA|362aa|down_5|NZ_CP019645.1_458326_459412_+	NA	NA|388aa|down_6|NZ_CP019645.1_459864_461028_+	pfam13252, DUF4043, Protein of unknown function (DUF4043)	NA|222aa|down_7|NZ_CP019645.1_461344_462010_+	NA	NA|748aa|down_8|NZ_CP019645.1_462282_464526_+	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|432aa|down_9|NZ_CP019645.1_464607_465903_-	COG0621, MiaB, 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis]
GCF_001999985.1_ASM199998v1	NZ_CP019645	Helicobacter bilis strain AAQJH chromosome, complete genome	2	1541698-1541811	2	CRISPRCasFinder	no		DEDDh,WYL,cas4,cas3	Orphan	TTAAAACAAGATATAGCGGAGTTAAGA	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,cas4,cas3	NA|161aa|up_9|NZ_CP019645.1_1521750_1522233_+,NA|53aa|up_8|NZ_CP019645.1_1523438_1523597_+,NA|217aa|up_4|NZ_CP019645.1_1537874_1538525_+,NA|157aa|up_2|NZ_CP019645.1_1538922_1539393_+,NA|196aa|up_1|NZ_CP019645.1_1539696_1540284_-,NA|212aa|up_0|NZ_CP019645.1_1540678_1541314_-,NA|91aa|down_0|NZ_CP019645.1_1541935_1542208_+,NA|498aa|down_1|NZ_CP019645.1_1542274_1543768_-,NA|96aa|down_6|NZ_CP019645.1_1549182_1549470_-	NA|161aa|up_9|NZ_CP019645.1_1521750_1522233_+	NA	NA|53aa|up_8|NZ_CP019645.1_1523438_1523597_+	NA	NA|3722aa|up_7|NZ_CP019645.1_1524654_1535820_-	pfam18760, ART-PolyVal, ADP-Ribosyltransferase in polyvalent proteins	NA|186aa|up_6|NZ_CP019645.1_1536199_1536757_+	pfam01555, N6_N4_Mtase, DNA methylase	NA|294aa|up_5|NZ_CP019645.1_1536923_1537805_+	pfam01555, N6_N4_Mtase, DNA methylase	NA|217aa|up_4|NZ_CP019645.1_1537874_1538525_+	NA	NA|57aa|up_3|NZ_CP019645.1_1538682_1538853_+	pfam01555, N6_N4_Mtase, DNA methylase	NA|157aa|up_2|NZ_CP019645.1_1538922_1539393_+	NA	NA|196aa|up_1|NZ_CP019645.1_1539696_1540284_-	NA	NA|212aa|up_0|NZ_CP019645.1_1540678_1541314_-	NA	NA|91aa|down_0|NZ_CP019645.1_1541935_1542208_+	NA	NA|498aa|down_1|NZ_CP019645.1_1542274_1543768_-	NA	NA|197aa|down_2|NZ_CP019645.1_1544341_1544932_-	cd07182, RNase_HII_bacteria_HII_like, Bacterial Ribonuclease HII-like	NA|661aa|down_3|NZ_CP019645.1_1544933_1546916_-	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism]	NA|393aa|down_4|NZ_CP019645.1_1547226_1548405_-	pfam00999, Na_H_Exchanger, Sodium/hydrogen exchanger family	NA|247aa|down_5|NZ_CP019645.1_1548425_1549166_-	cd08645, FMT_core_GART, Phosphoribosylglycinamide formyltransferase (GAR transformylase, GART)	NA|96aa|down_6|NZ_CP019645.1_1549182_1549470_-	NA	NA|872aa|down_7|NZ_CP019645.1_1549588_1552204_-	cd07548, P-type_ATPase-Cd_Zn_Co_like, P-type heavy metal-transporting ATPase, similar to Bacillus subtilis CadA which appears to transport cadmium, zinc and cobalt but not copper out of the cell	NA|415aa|down_8|NZ_CP019645.1_1552556_1553801_-	pfam18025, FucT_N, Alpha-(1,3)-fucosyltransferase FucT N-terminal domain	NA|172aa|down_9|NZ_CP019645.1_1554517_1555033_-	pfam18812, PBECR3, phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3
GCF_001999985.1_ASM199998v1	NZ_CP019645	Helicobacter bilis strain AAQJH chromosome, complete genome	3	2188940-2189024	3	CRISPRCasFinder	no		DEDDh,WYL,cas4,cas3	Orphan	AAGAGATAATCACATATATAAGATTCCA	28	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,cas4,cas3	NA,NA|121aa|down_4|NZ_CP019645.1_2193378_2193741_+,NA|218aa|down_5|NZ_CP019645.1_2193737_2194391_+,NA|299aa|down_6|NZ_CP019645.1_2194631_2195528_+	NA|482aa|up_9|NZ_CP019645.1_2172642_2174088_-	PRK00286, xseA, exodeoxyribonuclease VII large subunit; Reviewed	NA|386aa|up_8|NZ_CP019645.1_2174106_2175264_-	TIGR02614, Putative_lipid_II_flippase_FtsW, cell division protein FtsW	NA|380aa|up_7|NZ_CP019645.1_2175614_2176754_-	TIGR02210, Rod_shape-determining_protein_RodA, rod shape-determining protein RodA	NA|783aa|up_6|NZ_CP019645.1_2176809_2179158_+	PRK05582, PRK05582, type I DNA topoisomerase	NA|115aa|up_5|NZ_CP019645.1_2179316_2179661_+	pfam02261, Asp_decarbox, Aspartate decarboxylase	NA|101aa|up_4|NZ_CP019645.1_2179660_2179963_+	PRK03762, PRK03762, YbaB/EbfC family nucleoid-associated protein	NA|463aa|up_3|NZ_CP019645.1_2180261_2181650_+	pfam13180, PDZ_2, PDZ domain	NA|376aa|up_2|NZ_CP019645.1_2181671_2182799_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|522aa|up_1|NZ_CP019645.1_2183050_2184616_+	CHL00195, ycf46, Ycf46; Provisional	NA|1279aa|up_0|NZ_CP019645.1_2184640_2188477_+	pfam13087, AAA_12, AAA domain	NA|664aa|down_0|NZ_CP019645.1_2190044_2192036_+	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	NA|232aa|down_1|NZ_CP019645.1_2192038_2192734_+	PRK12704, PRK12704, phosphodiesterase; Provisional	NA|68aa|down_2|NZ_CP019645.1_2192745_2192949_+	pfam11211, DUF2997, Protein of unknown function (DUF2997)	NA|141aa|down_3|NZ_CP019645.1_2192945_2193368_+	pfam04889, Cwf_Cwc_15, Cwf15/Cwc15 cell cycle control protein	NA|121aa|down_4|NZ_CP019645.1_2193378_2193741_+	NA	NA|218aa|down_5|NZ_CP019645.1_2193737_2194391_+	NA	NA|299aa|down_6|NZ_CP019645.1_2194631_2195528_+	NA	NA|194aa|down_7|NZ_CP019645.1_2195539_2196121_+	pfam13353, Fer4_12, 4Fe-4S single cluster domain	NA|241aa|down_8|NZ_CP019645.1_2196207_2196930_+	cd03124, alpha_CA_prokaryotic_like, Carbonic anhydrase alpha, prokaryotic-like subfamily	NA|557aa|down_9|NZ_CP019645.1_2197138_2198809_+	TIGR02169, chromosome_segregation_protein_related_ptotein, chromosome segregation protein SMC, primarily archaeal type
