assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001999045.1_ASM199904v1	NZ_CP019619	Listeria monocytogenes strain 10-092876-1155 LM6 chromosome, complete genome	1	246860-247014	1	CRISPRCasFinder	no	cas3	csa3,DinG,cas3,WYL,casR,DEDDh	Unclear	TTTCCACCACCACCTACGGATGAAGAGTTAAGACTTGCTTTGCCAGAGAC	50	0	0	NA	NA	NA	1	1	Unclear	csa3,DinG,cas3,WYL,casR,DEDDh	NA,NA	NA|231aa|up_9|NZ_CP019619.1_234113_234806_+	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|403aa|up_8|NZ_CP019619.1_234802_236011_+	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|103aa|up_7|NZ_CP019619.1_236694_237003_+	PRK13259, PRK13259, septation regulator SpoVG	NA|103aa|up_6|NZ_CP019619.1_237121_237430_+	PRK13259, PRK13259, septation regulator SpoVG	NA|458aa|up_5|NZ_CP019619.1_237805_239179_+	PRK14354, glmU, bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	NA|319aa|up_4|NZ_CP019619.1_239229_240186_+	PRK01259, PRK01259, ribose-phosphate diphosphokinase	NA|238aa|up_3|NZ_CP019619.1_240229_240943_-	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|318aa|up_2|NZ_CP019619.1_241215_242169_-	cd00137, PI-PLCc, Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C	NA|530aa|up_1|NZ_CP019619.1_242411_244001_+	pfam01289, Thiol_cytolysin, Thiol-activated cytolysin	NA|511aa|up_0|NZ_CP019619.1_244335_245868_+	COG3227, LasB, Zinc metalloprotease (elastase) [Amino acid transport and metabolism]	NA|290aa|down_0|NZ_CP019619.1_248022_248892_+	smart00770, Zn_dep_PLPC, Zinc dependent phospholipase C (alpha toxin)	NA|108aa|down_1|NZ_CP019619.1_248963_249287_+	pfam17606, DUF5502, Family of unknown function (DUF5502)	NA|154aa|down_2|NZ_CP019619.1_249419_249881_+	COG4808, COG4808, Uncharacterized protein conserved in bacteria [Function unknown]	NA|111aa|down_3|NZ_CP019619.1_249933_250266_-	PRK01119, PRK01119, putative heavy metal-binding protein	NA|240aa|down_4|NZ_CP019619.1_250332_251052_-	pfam08713, DNA_alkylation, DNA alkylation repair enzyme	NA|314aa|down_5|NZ_CP019619.1_251084_252026_-	PRK00066, ldh, L-lactate dehydrogenase; Reviewed	NA|208aa|down_6|NZ_CP019619.1_252319_252943_+	PRK05618, PRK05618, 50S ribosomal protein L25/general stress protein Ctc; Reviewed	NA|195aa|down_7|NZ_CP019619.1_253032_253617_+	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain	NA|187aa|down_8|NZ_CP019619.1_253723_254284_+	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional	cas3|1180aa|down_9|NZ_CP019619.1_254397_257937_+	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription]
GCF_001999045.1_ASM199904v1	NZ_CP019619	Listeria monocytogenes strain 10-092876-1155 LM6 chromosome, complete genome	2	553359-553537	2	CRISPRCasFinder	no		csa3,DinG,cas3,WYL,casR,DEDDh	Orphan	TTAAGCAGTTTTGATACGAGCTC	23	0	0	NA	NA	NA	2	2	Orphan	csa3,DinG,cas3,WYL,casR,DEDDh	NA,NA|158aa|down_1|NZ_CP019619.1_556660_557134_+,NA|162aa|down_2|NZ_CP019619.1_557153_557639_+,NA|89aa|down_4|NZ_CP019619.1_558047_558314_+,NA|206aa|down_5|NZ_CP019619.1_559049_559667_+,NA|116aa|down_6|NZ_CP019619.1_559976_560324_+,NA|81aa|down_7|NZ_CP019619.1_560727_560970_+	NA|222aa|up_9|NZ_CP019619.1_538479_539145_-	COG3619, COG3619, Predicted membrane protein [Function unknown]	NA|252aa|up_8|NZ_CP019619.1_539165_539921_-	pfam16160, DUF4866, Domain of unknown function (DUF4866)	NA|720aa|up_7|NZ_CP019619.1_540037_542197_-	pfam01841, Transglut_core, Transglutaminase-like superfamily	NA|383aa|up_6|NZ_CP019619.1_542193_543342_-	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only]	NA|316aa|up_5|NZ_CP019619.1_543346_544294_-	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|532aa|up_4|NZ_CP019619.1_544449_546045_+	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]	NA|428aa|up_3|NZ_CP019619.1_546179_547463_+	cd11484, SLC-NCS1sbd_CobB-like, nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain	NA|367aa|up_2|NZ_CP019619.1_547463_548564_+	COG3535, COG3535, Uncharacterized conserved protein [Function unknown]	NA|517aa|up_1|NZ_CP019619.1_548556_550107_+	COG0145, HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|513aa|up_0|NZ_CP019619.1_550740_552279_+	pfam05043, Mga, Mga helix-turn-helix domain	NA|690aa|down_0|NZ_CP019619.1_554525_556595_+	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|158aa|down_1|NZ_CP019619.1_556660_557134_+	NA	NA|162aa|down_2|NZ_CP019619.1_557153_557639_+	NA	NA|102aa|down_3|NZ_CP019619.1_557666_557972_+	TIGR01167, Zinc_metalloprotease_ZmpB, LPXTG-motif cell wall anchor domain	NA|89aa|down_4|NZ_CP019619.1_558047_558314_+	NA	NA|206aa|down_5|NZ_CP019619.1_559049_559667_+	NA	NA|116aa|down_6|NZ_CP019619.1_559976_560324_+	NA	NA|81aa|down_7|NZ_CP019619.1_560727_560970_+	NA	NA|326aa|down_8|NZ_CP019619.1_561052_562030_-	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only]	NA|276aa|down_9|NZ_CP019619.1_562791_563619_+	pfam05708, Peptidase_C92, Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
GCF_001999045.1_ASM199904v1	NZ_CP019619	Listeria monocytogenes strain 10-092876-1155 LM6 chromosome, complete genome	3	555183-555767	1	CRT	no		csa3,DinG,cas3,WYL,casR,DEDDh	Orphan	GATGTAAGTAATTTTGATACNAGTTCAGTAACTNATATG	39	0	0	NA	NA	NA	7	7	Orphan	csa3,DinG,cas3,WYL,casR,DEDDh	NA,NA|158aa|down_0|NZ_CP019619.1_556660_557134_+,NA|162aa|down_1|NZ_CP019619.1_557153_557639_+,NA|89aa|down_3|NZ_CP019619.1_558047_558314_+,NA|206aa|down_4|NZ_CP019619.1_559049_559667_+,NA|116aa|down_5|NZ_CP019619.1_559976_560324_+,NA|81aa|down_6|NZ_CP019619.1_560727_560970_+	NA|252aa|up_9|NZ_CP019619.1_539165_539921_-	pfam16160, DUF4866, Domain of unknown function (DUF4866)	NA|720aa|up_8|NZ_CP019619.1_540037_542197_-	pfam01841, Transglut_core, Transglutaminase-like superfamily	NA|383aa|up_7|NZ_CP019619.1_542193_543342_-	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only]	NA|316aa|up_6|NZ_CP019619.1_543346_544294_-	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|532aa|up_5|NZ_CP019619.1_544449_546045_+	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]	NA|428aa|up_4|NZ_CP019619.1_546179_547463_+	cd11484, SLC-NCS1sbd_CobB-like, nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain	NA|367aa|up_3|NZ_CP019619.1_547463_548564_+	COG3535, COG3535, Uncharacterized conserved protein [Function unknown]	NA|517aa|up_2|NZ_CP019619.1_548556_550107_+	COG0145, HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|513aa|up_1|NZ_CP019619.1_550740_552279_+	pfam05043, Mga, Mga helix-turn-helix domain	NA|616aa|up_0|NZ_CP019619.1_552542_554390_+	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285	NA|158aa|down_0|NZ_CP019619.1_556660_557134_+	NA	NA|162aa|down_1|NZ_CP019619.1_557153_557639_+	NA	NA|102aa|down_2|NZ_CP019619.1_557666_557972_+	TIGR01167, Zinc_metalloprotease_ZmpB, LPXTG-motif cell wall anchor domain	NA|89aa|down_3|NZ_CP019619.1_558047_558314_+	NA	NA|206aa|down_4|NZ_CP019619.1_559049_559667_+	NA	NA|116aa|down_5|NZ_CP019619.1_559976_560324_+	NA	NA|81aa|down_6|NZ_CP019619.1_560727_560970_+	NA	NA|326aa|down_7|NZ_CP019619.1_561052_562030_-	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only]	NA|276aa|down_8|NZ_CP019619.1_562791_563619_+	pfam05708, Peptidase_C92, Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family	NA|120aa|down_9|NZ_CP019619.1_563646_564006_+	pfam11337, DUF3139, Protein of unknown function (DUF3139)
