assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001998885.1_ASM199888v1	NZ_CP019609	Vagococcus penaei strain CD276T chromosome, complete genome	1	996365-1000035	1,1,1	CRT,CRISPRCasFinder,PILER-CR	no	csa3,csn2,cas2,cas1,cas9	cas3,csa3,DinG,DEDDh,WYL,csn2,cas2,cas1,cas9	Type II-B,Type II-A,Type II-C	NGTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC,GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC,GTTTTGGAAGCATTCAAAACAGCATAGCTCTAAAAC	37,36,36	0	0	NA	NA	II-A:II-A:II-A	55,54,32	55	TypeII-B,TypeII-A,TypeII-C	cas3,csa3,DinG,DEDDh,WYL,csn2,cas2,cas1,cas9	NA|412aa|up_7|NZ_CP019609.1_988098_989334_-,NA|164aa|up_0|NZ_CP019609.1_995534_996026_+,NA	NA|201aa|up_9|NZ_CP019609.1_986425_987028_+	pfam07563, DUF1541, Protein of unknown function (DUF1541)	NA|309aa|up_8|NZ_CP019609.1_987103_988030_-	TIGR03151, enACPred_II, putative enoyl-[acyl-carrier-protein] reductase II	NA|412aa|up_7|NZ_CP019609.1_988098_989334_-	NA	NA|218aa|up_6|NZ_CP019609.1_989868_990522_-	TIGR02428, 3-oxoadipate_CoA-transferase_subunit_B, 3-oxoacid CoA-transferase, B subunit	NA|244aa|up_5|NZ_CP019609.1_990521_991253_-	COG1788, AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit [Lipid metabolism]	NA|261aa|up_4|NZ_CP019609.1_991266_992049_-	PRK05809, PRK05809, short-chain-enoyl-CoA hydratase	NA|284aa|up_3|NZ_CP019609.1_992066_992918_-	PRK05808, PRK05808, 3-hydroxybutyryl-CoA dehydrogenase; Validated	NA|393aa|up_2|NZ_CP019609.1_992949_994128_-	PRK05790, PRK05790, putative acyltransferase; Provisional	NA|313aa|up_1|NZ_CP019609.1_994420_995359_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|164aa|up_0|NZ_CP019609.1_995534_996026_+	NA	csn2|222aa|down_0|NZ_CP019609.1_1000152_1000818_-	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	cas2|114aa|down_1|NZ_CP019609.1_1000804_1001146_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|289aa|down_2|NZ_CP019609.1_1001142_1002009_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas9|1333aa|down_3|NZ_CP019609.1_1002014_1006013_-	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|605aa|down_4|NZ_CP019609.1_1006370_1008185_-	cd07544, P-type_ATPase_HM, P-type heavy metal-transporting ATPase; uncharacterized subfamily	NA|264aa|down_5|NZ_CP019609.1_1008558_1009350_-	COG4905, COG4905, Predicted membrane protein [Function unknown]	NA|157aa|down_6|NZ_CP019609.1_1009536_1010007_-	pfam13273, DUF4064, Protein of unknown function (DUF4064)	NA|186aa|down_7|NZ_CP019609.1_1010007_1010565_-	pfam06271, RDD, RDD family	NA|348aa|down_8|NZ_CP019609.1_1010551_1011595_-	cd07023, S49_Sppa_N_C, Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad	NA|144aa|down_9|NZ_CP019609.1_1011813_1012245_-	cd06471, ACD_LpsHSP_like, Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18
GCF_001998885.1_ASM199888v1	NZ_CP019609	Vagococcus penaei strain CD276T chromosome, complete genome	2	1801260-1803349	2,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas9,cas1,cas2,csn2	cas3,csa3,DinG,DEDDh,WYL,csn2,cas2,cas1,cas9	Type II-B,Type II-A,Type II-C	GTTTTTGTACTCTTAAAGATTTAGTAACGGTAAAAC,GTTTTTGTACTCTTAAAGATTTAGTAACGGTAAAAC,GTTTTTGTACTCTTAAAGATTTAGTAACGGTAAAAC	36,36,36	0	0	NA	NA	NA:NA:NA	31,31,17	31	TypeII-B,TypeII-A,TypeII-C	cas3,csa3,DinG,DEDDh,WYL,csn2,cas2,cas1,cas9	NA,NA|97aa|down_5|NZ_CP019609.1_1810656_1810947_+,NA|59aa|down_6|NZ_CP019609.1_1811033_1811210_+	NA|247aa|up_9|NZ_CP019609.1_1790228_1790969_+	cd07716, RNaseZ_short-form-like_MBL-fold, uncharacterized bacterial subgroup of Ribonuclease Z, short form; MBL-fold metallo-hydrolase domain	NA|336aa|up_8|NZ_CP019609.1_1790980_1791988_+	TIGR00545, Probable_lipoate-protein_ligase_A, lipoyltransferase and lipoate-protein ligase	NA|339aa|up_7|NZ_CP019609.1_1792090_1793107_-	PRK00927, PRK00927, tryptophanyl-tRNA synthetase; Reviewed	NA|133aa|up_6|NZ_CP019609.1_1793441_1793840_+	PRK01655, spxA, transcriptional regulator Spx; Reviewed	NA|237aa|up_5|NZ_CP019609.1_1793994_1794705_+	PRK02315, PRK02315, adaptor protein MecA	NA|177aa|up_4|NZ_CP019609.1_1794766_1795297_+	pfam04138, GtrA, GtrA-like protein	cas9|1133aa|up_3|NZ_CP019609.1_1795423_1798822_+	cd09643, Csn1, CRISPR/Cas system-associated protein Cas9	cas1|302aa|up_2|NZ_CP019609.1_1798961_1799867_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|103aa|up_1|NZ_CP019609.1_1799878_1800187_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|345aa|up_0|NZ_CP019609.1_1800186_1801221_+	cd12217, Stu0660_Csn2, Stu0660-like CRISPR/Cas system-associated protein Csn2	NA|323aa|down_0|NZ_CP019609.1_1803489_1804458_-	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit	NA|721aa|down_1|NZ_CP019609.1_1804471_1806634_-	PRK07306, PRK07306, ribonucleotide-diphosphate reductase subunit alpha; Validated	NA|123aa|down_2|NZ_CP019609.1_1806623_1806992_-	PRK03600, nrdI, class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA|78aa|down_3|NZ_CP019609.1_1806994_1807228_-	TIGR02194, Glutaredoxin-like_protein_NrdH, Glutaredoxin-like protein NrdH	NA|158aa|down_4|NZ_CP019609.1_1807568_1808042_+	COG1918, FeoA, Fe2+ transport system protein A [Inorganic ion transport and metabolism]	NA|97aa|down_5|NZ_CP019609.1_1810656_1810947_+	NA	NA|59aa|down_6|NZ_CP019609.1_1811033_1811210_+	NA	NA|314aa|down_7|NZ_CP019609.1_1812082_1813024_+	cd12181, ceo_syn, N(5)-(carboxyethyl)ornithine synthase	NA|289aa|down_8|NZ_CP019609.1_1813976_1814843_+	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism]	NA|292aa|down_9|NZ_CP019609.1_1814862_1815738_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]
