assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_001998865.1_ASM199886v1	NZ_CP019607	Tessaracoccus flavescens strain SST-39T chromosome, complete genome	1	1528555-1528662	1	CRISPRCasFinder	no	cas2	csa3,DEDDh,RT,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DinG	Unclear	TGAGCAGCCTCCGCCGACGAAGTCGCGC	28	0	0	NA	NA	NA	1	1	Unclear	csa3,DEDDh,RT,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DinG	NA|77aa|up_6|NZ_CP019607.1_1521075_1521306_+,NA|190aa|down_3|NZ_CP019607.1_1532002_1532572_+	NA|132aa|up_9|NZ_CP019607.1_1517095_1517491_-	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]	NA|346aa|up_8|NZ_CP019607.1_1517958_1518996_+	TIGR03858, LLM_2I7G, probable oxidoreductase, LLM family	NA|557aa|up_7|NZ_CP019607.1_1519153_1520824_+	pfam05960, DUF885, Bacterial protein of unknown function (DUF885)	NA|77aa|up_6|NZ_CP019607.1_1521075_1521306_+	NA	NA|253aa|up_5|NZ_CP019607.1_1521421_1522180_+	pfam06904, Extensin-like_C, Extensin-like protein C-terminus	NA|279aa|up_4|NZ_CP019607.1_1522510_1523347_-	pfam18164, GNAT_C, GNAT-like C-terminal domain	NA|168aa|up_3|NZ_CP019607.1_1523468_1523972_-	pfam12724, Flavodoxin_5, Flavodoxin domain	NA|201aa|up_2|NZ_CP019607.1_1524287_1524890_-	cd02972, DsbA_family, DsbA family; consists of DsbA and DsbA-like proteins, including DsbC, DsbG, glutathione (GSH) S-transferase kappa (GSTK), 2-hydroxychromene-2-carboxylate (HCCA) isomerase, an oxidoreductase (FrnE) presumed to be involved in frenolicin biosynthesis, a 27-kDa outer membrane protein, and similar proteins	NA|544aa|up_1|NZ_CP019607.1_1525158_1526790_-	pfam13751, DDE_Tnp_1_6, Transposase DDE domain	NA|414aa|up_0|NZ_CP019607.1_1526854_1528096_-	pfam00375, SDF, Sodium:dicarboxylate symporter family	NA|263aa|down_0|NZ_CP019607.1_1528728_1529517_-	COG3001, COG3001, Uncharacterized protein conserved in bacteria [Function unknown]	NA|315aa|down_1|NZ_CP019607.1_1529633_1530578_+	cd01409, SIRT4, SIRT4: Eukaryotic and prokaryotic group (class2) which includes human sirtuin SIRT4 and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation	NA|384aa|down_2|NZ_CP019607.1_1530737_1531889_+	pfam05661, DUF808, Protein of unknown function (DUF808)	NA|190aa|down_3|NZ_CP019607.1_1532002_1532572_+	NA	NA|192aa|down_4|NZ_CP019607.1_1532632_1533208_-	COG2085, COG2085, Predicted dinucleotide-binding enzymes [General function prediction only]	NA|156aa|down_5|NZ_CP019607.1_1533313_1533781_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|105aa|down_6|NZ_CP019607.1_1533926_1534241_-	pfam05437, AzlD, Branched-chain amino acid transport protein (AzlD)	NA|234aa|down_7|NZ_CP019607.1_1534237_1534939_-	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism]	NA|190aa|down_8|NZ_CP019607.1_1534935_1535505_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|113aa|down_9|NZ_CP019607.1_1535690_1536029_+	cd11533, NTP-PPase_Af0060_like, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3
GCF_001998865.1_ASM199886v1	NZ_CP019607	Tessaracoccus flavescens strain SST-39T chromosome, complete genome	2	1536292-1537782	2,1,1,2	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	csa3,DEDDh,RT,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DinG	Type I-E	GGGCTCACCCCCGCGTGGCGGGGACGGAC,GGGCTCACCCCCGCGTGGCGGGGACGGACN,GGCTCACCCCCGCGTGGCGGGGACGGAC,GGGCTCACCCCCGCGTGGCGGGGACGGAC	29,30,28,29	0	0	NA	NA	NA:NA:NA:NA	24,24,21,21	24	TypeI-E	csa3,DEDDh,RT,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DinG	NA|190aa|up_6|NZ_CP019607.1_1532002_1532572_+,NA	NA|263aa|up_9|NZ_CP019607.1_1528728_1529517_-	COG3001, COG3001, Uncharacterized protein conserved in bacteria [Function unknown]	NA|315aa|up_8|NZ_CP019607.1_1529633_1530578_+	cd01409, SIRT4, SIRT4: Eukaryotic and prokaryotic group (class2) which includes human sirtuin SIRT4 and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation	NA|384aa|up_7|NZ_CP019607.1_1530737_1531889_+	pfam05661, DUF808, Protein of unknown function (DUF808)	NA|190aa|up_6|NZ_CP019607.1_1532002_1532572_+	NA	NA|192aa|up_5|NZ_CP019607.1_1532632_1533208_-	COG2085, COG2085, Predicted dinucleotide-binding enzymes [General function prediction only]	NA|156aa|up_4|NZ_CP019607.1_1533313_1533781_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|105aa|up_3|NZ_CP019607.1_1533926_1534241_-	pfam05437, AzlD, Branched-chain amino acid transport protein (AzlD)	NA|234aa|up_2|NZ_CP019607.1_1534237_1534939_-	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism]	NA|190aa|up_1|NZ_CP019607.1_1534935_1535505_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|113aa|up_0|NZ_CP019607.1_1535690_1536029_+	cd11533, NTP-PPase_Af0060_like, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3	NA|418aa|down_0|NZ_CP019607.1_1538647_1539901_-	pfam00665, rve, Integrase core domain	cas2|113aa|down_1|NZ_CP019607.1_1547791_1548130_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|316aa|down_2|NZ_CP019607.1_1548123_1549071_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|225aa|down_3|NZ_CP019607.1_1549075_1549750_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|229aa|down_4|NZ_CP019607.1_1549749_1550436_-	pfam09704, Cas_Cas5d, CRISPR-associated protein (Cas_Cas5)	cas7|375aa|down_5|NZ_CP019607.1_1550432_1551557_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|210aa|down_6|NZ_CP019607.1_1551553_1552183_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|540aa|down_7|NZ_CP019607.1_1552190_1553810_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|916aa|down_8|NZ_CP019607.1_1553806_1556554_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|249aa|down_9|NZ_CP019607.1_1559703_1560450_+	PRK07570, PRK07570, succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Validated
GCF_001998865.1_ASM199886v1	NZ_CP019607	Tessaracoccus flavescens strain SST-39T chromosome, complete genome	3	1539966-1547735	3,2,3,4,5	CRISPRCasFinder,CRT,PILER-CR,PILER-CR,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	csa3,DEDDh,RT,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DinG	Type I-E	GGGCTCACCCCCGCGTGGCGGGGACGGAC,GGGCTCACCCCCGCGTGGCGGGGACGGAC,GGGCTCACCCCCGCGTGGCGGGGACGGAC,GGGCTCACCCCCGCGTGGCGGGGACGGAC,GGCTCACCCCCGCGTGGCGGGGACGGAC	29,29,29,29,28	0	0	NA	NA	NA:NA:NA:NA:NA	127,127,69,69,69	127	TypeI-E	csa3,DEDDh,RT,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DinG	NA|190aa|up_7|NZ_CP019607.1_1532002_1532572_+,NA|274aa|down_9|NZ_CP019607.1_1560565_1561387_+	NA|315aa|up_9|NZ_CP019607.1_1529633_1530578_+	cd01409, SIRT4, SIRT4: Eukaryotic and prokaryotic group (class2) which includes human sirtuin SIRT4 and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation	NA|384aa|up_8|NZ_CP019607.1_1530737_1531889_+	pfam05661, DUF808, Protein of unknown function (DUF808)	NA|190aa|up_7|NZ_CP019607.1_1532002_1532572_+	NA	NA|192aa|up_6|NZ_CP019607.1_1532632_1533208_-	COG2085, COG2085, Predicted dinucleotide-binding enzymes [General function prediction only]	NA|156aa|up_5|NZ_CP019607.1_1533313_1533781_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|105aa|up_4|NZ_CP019607.1_1533926_1534241_-	pfam05437, AzlD, Branched-chain amino acid transport protein (AzlD)	NA|234aa|up_3|NZ_CP019607.1_1534237_1534939_-	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism]	NA|190aa|up_2|NZ_CP019607.1_1534935_1535505_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|113aa|up_1|NZ_CP019607.1_1535690_1536029_+	cd11533, NTP-PPase_Af0060_like, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3	NA|418aa|up_0|NZ_CP019607.1_1538647_1539901_-	pfam00665, rve, Integrase core domain	cas2|113aa|down_0|NZ_CP019607.1_1547791_1548130_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|316aa|down_1|NZ_CP019607.1_1548123_1549071_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|225aa|down_2|NZ_CP019607.1_1549075_1549750_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|229aa|down_3|NZ_CP019607.1_1549749_1550436_-	pfam09704, Cas_Cas5d, CRISPR-associated protein (Cas_Cas5)	cas7|375aa|down_4|NZ_CP019607.1_1550432_1551557_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|210aa|down_5|NZ_CP019607.1_1551553_1552183_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|540aa|down_6|NZ_CP019607.1_1552190_1553810_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|916aa|down_7|NZ_CP019607.1_1553806_1556554_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|249aa|down_8|NZ_CP019607.1_1559703_1560450_+	PRK07570, PRK07570, succinate dehydrogenase/fumarate reductase iron-sulfur subunit; Validated	NA|274aa|down_9|NZ_CP019607.1_1560565_1561387_+	NA
GCF_001998865.1_ASM199886v1	NZ_CP019607	Tessaracoccus flavescens strain SST-39T chromosome, complete genome	4	1641465-1641557	4	CRISPRCasFinder	no		csa3,DEDDh,RT,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DinG	Orphan	CCCAACCCTAGGTGGGGGCGGATCAGGTCTGC	32	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,RT,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DinG	NA|331aa|up_5|NZ_CP019607.1_1636434_1637427_-,NA|123aa|up_4|NZ_CP019607.1_1637604_1637973_+,NA|242aa|up_3|NZ_CP019607.1_1637980_1638706_-,NA|592aa|up_1|NZ_CP019607.1_1639204_1640980_-,NA|582aa|down_0|NZ_CP019607.1_1642514_1644260_-,NA|320aa|down_1|NZ_CP019607.1_1644256_1645216_-,NA|111aa|down_2|NZ_CP019607.1_1645323_1645656_+,NA|82aa|down_3|NZ_CP019607.1_1645706_1645952_-,NA|189aa|down_4|NZ_CP019607.1_1645948_1646515_-,NA|63aa|down_5|NZ_CP019607.1_1648397_1648586_+,NA|54aa|down_6|NZ_CP019607.1_1648604_1648766_-,NA|387aa|down_7|NZ_CP019607.1_1648853_1650014_-	NA|325aa|up_9|NZ_CP019607.1_1631752_1632727_-	COG2390, DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]	NA|212aa|up_8|NZ_CP019607.1_1632833_1633469_-	pfam00857, Isochorismatase, Isochorismatase family	NA|195aa|up_7|NZ_CP019607.1_1633492_1634077_+	COG3226, COG3226, Uncharacterized protein conserved in bacteria [Function unknown]	NA|573aa|up_6|NZ_CP019607.1_1634576_1636295_+	COG0578, GlpA, Glycerol-3-phosphate dehydrogenase [Energy production and conversion]	NA|331aa|up_5|NZ_CP019607.1_1636434_1637427_-	NA	NA|123aa|up_4|NZ_CP019607.1_1637604_1637973_+	NA	NA|242aa|up_3|NZ_CP019607.1_1637980_1638706_-	NA	NA|110aa|up_2|NZ_CP019607.1_1638835_1639165_-	pfam10722, YbjN, Putative bacterial sensory transduction regulator	NA|592aa|up_1|NZ_CP019607.1_1639204_1640980_-	NA	NA|148aa|up_0|NZ_CP019607.1_1641018_1641462_-	pfam10722, YbjN, Putative bacterial sensory transduction regulator	NA|582aa|down_0|NZ_CP019607.1_1642514_1644260_-	NA	NA|320aa|down_1|NZ_CP019607.1_1644256_1645216_-	NA	NA|111aa|down_2|NZ_CP019607.1_1645323_1645656_+	NA	NA|82aa|down_3|NZ_CP019607.1_1645706_1645952_-	NA	NA|189aa|down_4|NZ_CP019607.1_1645948_1646515_-	NA	NA|63aa|down_5|NZ_CP019607.1_1648397_1648586_+	NA	NA|54aa|down_6|NZ_CP019607.1_1648604_1648766_-	NA	NA|387aa|down_7|NZ_CP019607.1_1648853_1650014_-	NA	NA|248aa|down_8|NZ_CP019607.1_1650583_1651327_+	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|74aa|down_9|NZ_CP019607.1_1651400_1651622_+	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons
GCF_001998865.1_ASM199886v1	NZ_CP019607	Tessaracoccus flavescens strain SST-39T chromosome, complete genome	5	1852932-1853024	5	CRISPRCasFinder	no		csa3,DEDDh,RT,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DinG	Orphan	TGGTGGCGCACCCGTCGGCGCGGGGCTTGTCC	32	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,RT,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DinG	NA|331aa|up_8|NZ_CP019607.1_1840588_1841581_-,NA|60aa|down_0|NZ_CP019607.1_1853352_1853532_+,NA|304aa|down_1|NZ_CP019607.1_1853858_1854770_+,NA|187aa|down_3|NZ_CP019607.1_1855676_1856237_+	NA|142aa|up_9|NZ_CP019607.1_1840086_1840512_+	TIGR03562, osmo_induc_OsmC, peroxiredoxin, OsmC subfamily	NA|331aa|up_8|NZ_CP019607.1_1840588_1841581_-	NA	NA|46aa|up_7|NZ_CP019607.1_1841684_1841822_+	PRK00595, rpmG, 50S ribosomal protein L33; Validated	NA|100aa|up_6|NZ_CP019607.1_1841821_1842121_+	PRK08881, rpsN, 30S ribosomal protein S14; Reviewed	NA|318aa|up_5|NZ_CP019607.1_1842136_1843090_-	COG2380, COG2380, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1098aa|up_4|NZ_CP019607.1_1843089_1846383_-	TIGR00618, Nuclease_SbcCD_subunit_C, exonuclease SbcC	NA|385aa|up_3|NZ_CP019607.1_1846382_1847537_-	TIGR00619, Nuclease_SbcCD_subunit_D, exonuclease SbcD	NA|417aa|up_2|NZ_CP019607.1_1849343_1850594_-	pfam18062, RE_AspBHI_N, Restriction endonuclease AspBHI N-terminal	NA|202aa|up_1|NZ_CP019607.1_1850546_1851152_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|329aa|up_0|NZ_CP019607.1_1851594_1852581_-	cd05379, CAP_bacterial, Bacterial CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain proteins	NA|60aa|down_0|NZ_CP019607.1_1853352_1853532_+	NA	NA|304aa|down_1|NZ_CP019607.1_1853858_1854770_+	NA	NA|263aa|down_2|NZ_CP019607.1_1854753_1855542_+	cd00657, Ferritin_like, Ferritin-like superfamily of diiron-containing four-helix-bundle proteins	NA|187aa|down_3|NZ_CP019607.1_1855676_1856237_+	NA	NA|215aa|down_4|NZ_CP019607.1_1857015_1857660_-	pfam08044, DUF1707, Domain of unknown function (DUF1707)	NA|450aa|down_5|NZ_CP019607.1_1857749_1859099_+	pfam06738, ThrE, Putative threonine/serine exporter	NA|453aa|down_6|NZ_CP019607.1_1859902_1861261_-	pfam00872, Transposase_mut, Transposase, Mutator family	NA|218aa|down_7|NZ_CP019607.1_1861363_1862017_+	pfam01610, DDE_Tnp_ISL3, Transposase	NA|729aa|down_8|NZ_CP019607.1_1862119_1864306_-	PRK15098, PRK15098, beta-glucosidase BglX	NA|339aa|down_9|NZ_CP019607.1_1864380_1865397_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
